Your job contains 1 sequence.
>032311
MIACVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPKKSGPTLNETFLG
LLYPTENYKVYGYLTNTKVKFILVTTDLDVRDADVRNFFRRFHAAYIDAVSNPFHVPGKK
ITSRTFAERVSTIVKSFGLSSAG
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 032311
(143 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2051457 - symbol:AT2G20930 "AT2G20930" species... 659 1.1e-64 1
DICTYBASE|DDB_G0292690 - symbol:trappc2l "trafficking pro... 370 4.6e-34 1
RGD|1304906 - symbol:Trappc2l "trafficking protein partic... 341 5.4e-31 1
MGI|MGI:1916295 - symbol:Trappc2l "trafficking protein pa... 340 6.9e-31 1
UNIPROTKB|A6H7F7 - symbol:TRAPPC2L "Trafficking protein p... 336 1.8e-30 1
UNIPROTKB|Q9UL33 - symbol:TRAPPC2L "Trafficking protein p... 335 2.3e-30 1
UNIPROTKB|E1BYR2 - symbol:TRAPPC2L "Uncharacterized prote... 334 3.0e-30 1
UNIPROTKB|H3BP13 - symbol:TRAPPC2L "Trafficking protein p... 334 3.0e-30 1
UNIPROTKB|E2RB28 - symbol:TRAPPC2L "Uncharacterized prote... 327 1.6e-29 1
UNIPROTKB|F1S6M0 - symbol:TRAPPC2L "Uncharacterized prote... 319 1.2e-28 1
UNIPROTKB|F1MIB4 - symbol:TRAPPC2L "Trafficking protein p... 312 6.4e-28 1
FB|FBgn0033605 - symbol:CG9067 species:7227 "Drosophila m... 296 3.2e-26 1
UNIPROTKB|H3BUK6 - symbol:TRAPPC2L "Trafficking protein p... 267 3.8e-23 1
WB|WBGene00044604 - symbol:T10F2.5 species:6239 "Caenorha... 184 2.3e-14 1
UNIPROTKB|H3BPN3 - symbol:TRAPPC2L "Trafficking protein p... 180 6.2e-14 1
ZFIN|ZDB-GENE-040801-249 - symbol:trappc2l "trafficking p... 178 1.0e-13 1
POMBASE|SPAC15A10.12c - symbol:SPAC15A10.12c "TRAPP compl... 167 1.5e-12 1
UNIPROTKB|H3BQQ8 - symbol:TRAPPC2L "Trafficking protein p... 165 2.4e-12 1
DICTYBASE|DDB_G0282887 - symbol:trappc2 "trafficking prot... 146 2.5e-10 1
TAIR|locus:2198983 - symbol:AT1G80500 "AT1G80500" species... 145 3.2e-10 1
UNIPROTKB|G1K394 - symbol:TRAPPC2 "Trafficking protein pa... 140 1.1e-09 1
UNIPROTKB|G5EA75 - symbol:TRAPPC2 "Trafficking protein pa... 136 2.9e-09 1
UNIPROTKB|Q3T0F2 - symbol:TRAPPC2 "Trafficking protein pa... 134 4.7e-09 1
UNIPROTKB|F1SRI0 - symbol:TRAPPC2 "Trafficking protein pa... 134 4.7e-09 1
UNIPROTKB|E2QV03 - symbol:TRAPPC2 "Trafficking protein pa... 133 5.9e-09 1
UNIPROTKB|P0DI81 - symbol:TRAPPC2 "Trafficking protein pa... 131 9.7e-09 1
UNIPROTKB|P0DI82 - symbol:TRAPPC2P1 "Trafficking protein ... 131 9.7e-09 1
RGD|1306925 - symbol:Trappc2 "trafficking protein particl... 131 9.7e-09 1
POMBASE|SPBC11G11.04 - symbol:trs20 "TRAPP complex subuni... 130 1.2e-08 1
RGD|6499350 - symbol:LOC100910318 "trafficking protein pa... 127 2.6e-08 1
WB|WBGene00021046 - symbol:sedl-1 species:6239 "Caenorhab... 121 1.1e-07 1
UNIPROTKB|O02173 - symbol:sedl-1 "Probable trafficking pr... 121 1.1e-07 1
ZFIN|ZDB-GENE-060929-1266 - symbol:trappc2 "trafficking p... 118 2.3e-07 1
UNIPROTKB|Q5ZKP4 - symbol:TRAPPC2 "Trafficking protein pa... 114 6.1e-07 1
SGD|S000000458 - symbol:TRS20 "Subunit of the transport p... 86 2.3e-06 2
FB|FBgn0263604 - symbol:l(3)72Dh "lethal (3) 72Dh" specie... 106 4.3e-06 1
UNIPROTKB|H3BPS1 - symbol:TRAPPC2L "Trafficking protein p... 102 1.1e-05 1
UNIPROTKB|F5H785 - symbol:TRAPPC2 "Trafficking protein pa... 91 0.00017 1
UNIPROTKB|Q17QI1 - symbol:TRAPPC1 "Trafficking protein pa... 96 0.00025 1
UNIPROTKB|E2RTE6 - symbol:TRAPPC1 "Uncharacterized protei... 96 0.00025 1
UNIPROTKB|Q9Y5R8 - symbol:TRAPPC1 "Trafficking protein pa... 96 0.00025 1
UNIPROTKB|F2Z5M0 - symbol:TRAPPC1 "Uncharacterized protei... 96 0.00025 1
MGI|MGI:1098727 - symbol:Trappc1 "trafficking protein par... 96 0.00025 1
RGD|1311365 - symbol:Trappc1 "trafficking protein particl... 96 0.00025 1
UNIPROTKB|Q2KMM2 - symbol:Trappc1 "Trafficking protein pa... 96 0.00025 1
>TAIR|locus:2051457 [details] [associations]
symbol:AT2G20930 "AT2G20930" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 EMBL:CP002685 GO:GO:0005622
GO:GO:0006888 SUPFAM:SSF64356 EMBL:AC006234 PANTHER:PTHR12403
OMA:CNPFYIP EMBL:BT025606 EMBL:AK317476 IPI:IPI00519884 PIR:A84595
RefSeq:NP_565493.1 UniGene:At.39634 ProteinModelPortal:Q9SKS7
SMR:Q9SKS7 STRING:Q9SKS7 PRIDE:Q9SKS7 EnsemblPlants:AT2G20930.1
GeneID:816627 KEGG:ath:AT2G20930 TAIR:At2g20930 InParanoid:Q9SKS7
PhylomeDB:Q9SKS7 ProtClustDB:CLSN2688290 ArrayExpress:Q9SKS7
Genevestigator:Q9SKS7 Uniprot:Q9SKS7
Length = 140
Score = 659 (237.0 bits), Expect = 1.1e-64, P = 1.1e-64
Identities = 123/140 (87%), Positives = 132/140 (94%)
Query: 1 MIACVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPKKSGPTLNETFLG 60
MI CVAVVGHQNNPLYIQSFT+ADDALKLHHIVHCSLDV++ERVNNPKKSG TLNE FLG
Sbjct: 1 MIVCVAVVGHQNNPLYIQSFTDADDALKLHHIVHCSLDVIEERVNNPKKSGTTLNEAFLG 60
Query: 61 LLYPTENYKVYGYLTNTKVKFILVTTDLDVRDADVRNFFRRFHAAYIDAVSNPFHVPGKK 120
LLYPT NYKVYGYLTNTKVKFILVTTDLDVRD DVR+FFR+FHAAY+DAVSNPFHVPGKK
Sbjct: 61 LLYPTVNYKVYGYLTNTKVKFILVTTDLDVRDTDVRSFFRKFHAAYVDAVSNPFHVPGKK 120
Query: 121 ITSRTFAERVSTIVKSFGLS 140
ITSRTFA+ VS IV S+GL+
Sbjct: 121 ITSRTFAQTVSNIVGSYGLN 140
>DICTYBASE|DDB_G0292690 [details] [associations]
symbol:trappc2l "trafficking protein particle complex
subunit 2-like protein" species:44689 "Dictyostelium discoideum"
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628
dictyBase:DDB_G0292690 GenomeReviews:CM000155_GR EMBL:AAFI02000194
GO:GO:0005622 GO:GO:0006888 SUPFAM:SSF64356 PANTHER:PTHR12403
eggNOG:NOG238004 RefSeq:XP_629573.1 ProteinModelPortal:Q54CU7
PRIDE:Q54CU7 EnsemblProtists:DDB0266384 GeneID:8628834
KEGG:ddi:DDB_G0292690 OMA:CNPFYIP ProtClustDB:CLSZ2728724
Uniprot:Q54CU7
Length = 140
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 69/139 (49%), Positives = 102/139 (73%)
Query: 2 IACVAVVGHQNNPLYIQSFTEA---DDALKLHHIVHCSLDVVDERVNNPKKSGPTLNETF 58
I CVA+VG NNPL+IQ F+ + ++ LKLH+IVHCSLD+++++ + KK P+ + +
Sbjct: 4 IVCVAIVGKGNNPLFIQDFSSSITDENKLKLHYIVHCSLDIIEDKPGSNKKL-PS--DMY 60
Query: 59 LGLLYPTENYKVYGYLTNTKVKFILVTTDL-DVRDADVRNFFRRFHAAYIDAVSNPFHVP 117
LGLLYPTE+YKVYGYLTNTK+KFI+V D D++D+D++ FF+R +I+ SNPF+ P
Sbjct: 61 LGLLYPTEDYKVYGYLTNTKIKFIIVVLDTSDIKDSDLKLFFKRLQTLFINTTSNPFYKP 120
Query: 118 GKKITSRTFAERVSTIVKS 136
K+ S+ F + V+ +V S
Sbjct: 121 NSKVESKKFLQEVTNLVPS 139
>RGD|1304906 [details] [associations]
symbol:Trappc2l "trafficking protein particle complex 2-like"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 RGD:1304906 GO:GO:0005783
GO:GO:0005794 GO:GO:0048471 GO:GO:0006888 EMBL:CH473972
SUPFAM:SSF64356 PANTHER:PTHR12403 CTD:51693 eggNOG:NOG238004
HOGENOM:HOG000230646 OrthoDB:EOG4N8R62 OMA:CNPFYIP
GeneTree:ENSGT00510000047505 EMBL:BC166907 EMBL:BC166917
EMBL:BC168734 IPI:IPI00363736 RefSeq:NP_001099663.1
UniGene:Rn.24899 ProteinModelPortal:B2RYU6 STRING:B2RYU6
Ensembl:ENSRNOT00000019740 GeneID:292074 KEGG:rno:292074
UCSC:RGD:1304906 NextBio:633712 Genevestigator:B2RYU6
Uniprot:B2RYU6
Length = 139
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 64/136 (47%), Positives = 98/136 (72%)
Query: 1 MIACVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPKKSGPTLNETFLG 60
M C+AV+ +N PLYI+S T ++ LK H++VH SLDVVDE+++ K+ E +LG
Sbjct: 1 MAVCIAVIAKENYPLYIRS-TPTENELKFHYMVHTSLDVVDEKISAMGKALVDQRELYLG 59
Query: 61 LLYPTENYKVYGYLTNTKVKFILV--TTDLDVRDADVRNFFRRFHAAYIDAVSNPFHVPG 118
LLYPTE+YKVYGY+TN+KVKF++V +++ +RD ++R+ FR+ H +Y D + NPF+ PG
Sbjct: 60 LLYPTEDYKVYGYVTNSKVKFVMVVDSSNTALRDNEIRSMFRKLHNSYTDVMCNPFYNPG 119
Query: 119 KKITSRTFAERVSTIV 134
+I SR F V++++
Sbjct: 120 DRIQSRAFDTMVTSMM 135
>MGI|MGI:1916295 [details] [associations]
symbol:Trappc2l "trafficking protein particle complex
2-like" species:10090 "Mus musculus" [GO:0005622 "intracellular"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 MGI:MGI:1916295 GO:GO:0005783
GO:GO:0005794 GO:GO:0048471 GO:GO:0006888 SUPFAM:SSF64356
PANTHER:PTHR12403 CTD:51693 eggNOG:NOG238004 HOGENOM:HOG000230646
HOVERGEN:HBG056603 OrthoDB:EOG4N8R62 OMA:CNPFYIP EMBL:AB030200
EMBL:AK007526 EMBL:BC028502 EMBL:BC114968 IPI:IPI00125570
RefSeq:NP_067477.1 UniGene:Mm.38746 ProteinModelPortal:Q9JME7
SMR:Q9JME7 IntAct:Q9JME7 STRING:Q9JME7 PhosphoSite:Q9JME7
PaxDb:Q9JME7 PRIDE:Q9JME7 DNASU:59005 Ensembl:ENSMUST00000015157
GeneID:59005 KEGG:mmu:59005 UCSC:uc009ntj.2
GeneTree:ENSGT00510000047505 InParanoid:Q9JME7 NextBio:314530
Bgee:Q9JME7 CleanEx:MM_TRAPPC2L Genevestigator:Q9JME7
Uniprot:Q9JME7
Length = 139
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 64/136 (47%), Positives = 97/136 (71%)
Query: 1 MIACVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPKKSGPTLNETFLG 60
M C+AV+ +N PLYI+S T + LK H++VH SLDVVDE+++ K+ E +LG
Sbjct: 1 MAVCIAVIAKENYPLYIRS-TPTESELKFHYMVHTSLDVVDEKISAMGKALVDQRELYLG 59
Query: 61 LLYPTENYKVYGYLTNTKVKFILV--TTDLDVRDADVRNFFRRFHAAYIDAVSNPFHVPG 118
LLYPTE+YKVYGY+TN+KVKF++V +++ +RD ++R+ FR+ H +Y D + NPF+ PG
Sbjct: 60 LLYPTEDYKVYGYVTNSKVKFVMVVDSSNTALRDNEIRSMFRKLHNSYTDVMCNPFYNPG 119
Query: 119 KKITSRTFAERVSTIV 134
+I SR F V++++
Sbjct: 120 DRIQSRAFDTMVTSMM 135
>UNIPROTKB|A6H7F7 [details] [associations]
symbol:TRAPPC2L "Trafficking protein particle complex
subunit 2-like protein" species:9913 "Bos taurus" [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IEA] InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628
GO:GO:0005783 GO:GO:0005794 GO:GO:0048471 GO:GO:0006888
SUPFAM:SSF64356 PANTHER:PTHR12403 EMBL:BC146228 IPI:IPI00854544
RefSeq:NP_001092390.1 UniGene:Bt.2967 ProteinModelPortal:A6H7F7
STRING:A6H7F7 GeneID:509955 KEGG:bta:509955 CTD:51693
eggNOG:NOG238004 HOGENOM:HOG000230646 HOVERGEN:HBG056603
InParanoid:A6H7F7 OrthoDB:EOG4N8R62 NextBio:20869211 Uniprot:A6H7F7
Length = 139
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 64/136 (47%), Positives = 97/136 (71%)
Query: 1 MIACVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPKKSGPTLNETFLG 60
M CVAV+ +N PLYI+S ++ LK H++VH SLDVVDE+++ K+ E +LG
Sbjct: 1 MAVCVAVIAKENYPLYIRSIP-TENELKFHYMVHTSLDVVDEKISAMGKALVDQRELYLG 59
Query: 61 LLYPTENYKVYGYLTNTKVKFILV--TTDLDVRDADVRNFFRRFHAAYIDAVSNPFHVPG 118
LLYPTE+YKVYGY+TN+KVKF++V +++ +RD ++R+ FR+ H +Y D + NPF+ PG
Sbjct: 60 LLYPTEDYKVYGYVTNSKVKFVMVVDSSNTALRDNEIRSMFRKLHNSYTDVMCNPFYNPG 119
Query: 119 KKITSRTFAERVSTIV 134
+I SR F V++++
Sbjct: 120 DRIQSRAFDGMVTSMM 135
>UNIPROTKB|Q9UL33 [details] [associations]
symbol:TRAPPC2L "Trafficking protein particle complex
subunit 2-like protein" species:9606 "Homo sapiens" [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628 GO:GO:0005783
GO:GO:0005794 GO:GO:0005737 GO:GO:0048471 GO:GO:0006888
SUPFAM:SSF64356 EMBL:AC092384 PANTHER:PTHR12403 CTD:51693
eggNOG:NOG238004 HOGENOM:HOG000230646 HOVERGEN:HBG056603
OrthoDB:EOG4N8R62 OMA:CNPFYIP EMBL:AF089106 EMBL:AF161524
EMBL:AK126779 EMBL:AK311885 EMBL:BC011369 EMBL:BC018024
EMBL:BC105809 IPI:IPI00007819 IPI:IPI00644084 RefSeq:NP_057293.1
UniGene:Hs.461722 ProteinModelPortal:Q9UL33 SMR:Q9UL33
IntAct:Q9UL33 STRING:Q9UL33 PhosphoSite:Q9UL33 DMDM:74721024
PaxDb:Q9UL33 PRIDE:Q9UL33 Ensembl:ENST00000301021 GeneID:51693
KEGG:hsa:51693 UCSC:uc002fmc.3 UCSC:uc002fmd.3
GeneCards:GC16P088923 H-InvDB:HIX0019527 HGNC:HGNC:30887
HPA:HPA041714 MIM:610970 neXtProt:NX_Q9UL33 PharmGKB:PA145147879
InParanoid:Q9UL33 PhylomeDB:Q9UL33 GenomeRNAi:51693 NextBio:55706
Bgee:Q9UL33 CleanEx:HS_TRAPPC2L Genevestigator:Q9UL33
Uniprot:Q9UL33
Length = 140
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 64/137 (46%), Positives = 99/137 (72%)
Query: 1 MIACVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPKKSGPTLNETFLG 60
M C+AV+ +N PLYI+S T ++ LK H++VH SLDVVDE+++ K+ E +LG
Sbjct: 1 MAVCIAVIAKENYPLYIRS-TPTENELKFHYMVHTSLDVVDEKISAMGKALVDQRELYLG 59
Query: 61 LLYPTENYKVYGYLTNTKVKFILV--TTDLDVRDADVRNFFRRFHAAYIDAVSNPFHVPG 118
LLYPTE+YKVYGY+TN+KVKF++V +++ +RD ++R+ FR+ H +Y D + NPF+ PG
Sbjct: 60 LLYPTEDYKVYGYVTNSKVKFVMVVDSSNTALRDNEIRSMFRKLHNSYTDVMCNPFYNPG 119
Query: 119 KKI-TSRTFAERVSTIV 134
+I +SR F V++++
Sbjct: 120 DRIQSSRAFDNMVTSMM 136
>UNIPROTKB|E1BYR2 [details] [associations]
symbol:TRAPPC2L "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628 GO:GO:0005737
GO:GO:0006888 SUPFAM:SSF64356 PANTHER:PTHR12403 CTD:51693
OMA:CNPFYIP GeneTree:ENSGT00510000047505 EMBL:AADN02054103
IPI:IPI00575042 RefSeq:XP_414207.1 Ensembl:ENSGALT00000010103
GeneID:415847 KEGG:gga:415847 NextBio:20819390 Uniprot:E1BYR2
Length = 139
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 63/136 (46%), Positives = 96/136 (70%)
Query: 1 MIACVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPKKSGPTLNETFLG 60
M C+AV+ +N PLYI+S ++ LK H+ VH SLDVVDE+++ K+ E +LG
Sbjct: 1 MAVCIAVIAKENYPLYIRS-VPTENELKFHYTVHTSLDVVDEKISAMGKAMVDQRELYLG 59
Query: 61 LLYPTENYKVYGYLTNTKVKFILV--TTDLDVRDADVRNFFRRFHAAYIDAVSNPFHVPG 118
LLYPTE+YKVYGY+TN+KVKF++V +++ +RD ++R+ FR+ H +Y D + NPF+ PG
Sbjct: 60 LLYPTEDYKVYGYVTNSKVKFVMVVDSSNTALRDNEIRSMFRKLHNSYTDIMCNPFYNPG 119
Query: 119 KKITSRTFAERVSTIV 134
+I SR F V++++
Sbjct: 120 DRIHSRAFDNMVNSMM 135
>UNIPROTKB|H3BP13 [details] [associations]
symbol:TRAPPC2L "Trafficking protein particle complex
subunit 2-like protein" species:9606 "Homo sapiens" [GO:0005622
"intracellular" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 GO:GO:0005622 GO:GO:0006888
SUPFAM:SSF64356 EMBL:AC092384 PANTHER:PTHR12403 HGNC:HGNC:30887
ProteinModelPortal:H3BP13 SMR:H3BP13 PRIDE:H3BP13
Ensembl:ENST00000565504 Bgee:H3BP13 Uniprot:H3BP13
Length = 241
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 66/140 (47%), Positives = 97/140 (69%)
Query: 1 MIACVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPKKSGPTLNETFLG 60
M C+AV+ +N PLYI+S T ++ LK H++VH SLDVVDE+++ K+ E +LG
Sbjct: 1 MAVCIAVIAKENYPLYIRS-TPTENELKFHYMVHTSLDVVDEKISAMGKALVDQRELYLG 59
Query: 61 LLYPTENYKVYGYLTNTKVKFILV--TTDLDVRDADVRNFFRRFHAAYIDAVSNPFHVPG 118
LLYPTE+YKVYGY+TN+KVKF++V +++ +RD ++R+ FR+ H +Y D + NPF+ PG
Sbjct: 60 LLYPTEDYKVYGYVTNSKVKFVMVVDSSNTALRDNEIRSMFRKLHNSYTDVMCNPFYNPG 119
Query: 119 KKITSRTFAERVSTIVKSFG 138
+I SR VS + S G
Sbjct: 120 DRIQSRWALLSVSCHLLSVG 139
>UNIPROTKB|E2RB28 [details] [associations]
symbol:TRAPPC2L "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628 GO:GO:0005737
GO:GO:0006888 SUPFAM:SSF64356 PANTHER:PTHR12403 OMA:CNPFYIP
GeneTree:ENSGT00510000047505 EMBL:AAEX03003965
Ensembl:ENSCAFT00000037607 Uniprot:E2RB28
Length = 140
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 63/137 (45%), Positives = 97/137 (70%)
Query: 1 MIACVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPKKSGPTLNETFLG 60
M CVAV+ +N PLYI+S ++ LK H++VH SLDVVDE+++ K+ E +LG
Sbjct: 1 MAVCVAVIAKENYPLYIRSIP-TENELKFHYMVHTSLDVVDEKISAMGKALVDQRELYLG 59
Query: 61 LLYPTENYKV-YGYLTNTKVKFILV--TTDLDVRDADVRNFFRRFHAAYIDAVSNPFHVP 117
LLYPTE+YK+ YGY+TN+KVKF++V +++ +RD ++R+ FR+ H +Y D + NPF+ P
Sbjct: 60 LLYPTEDYKIKYGYVTNSKVKFVMVVDSSNTALRDNEIRSMFRKLHNSYTDVMCNPFYNP 119
Query: 118 GKKITSRTFAERVSTIV 134
G +I SR F V++++
Sbjct: 120 GDRIHSRAFDSMVTSMM 136
>UNIPROTKB|F1S6M0 [details] [associations]
symbol:TRAPPC2L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 GO:GO:0005737 GO:GO:0006888
SUPFAM:SSF64356 PANTHER:PTHR12403 OMA:CNPFYIP
GeneTree:ENSGT00510000047505 EMBL:FP102571
Ensembl:ENSSSCT00000002936 Uniprot:F1S6M0
Length = 141
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 61/138 (44%), Positives = 96/138 (69%)
Query: 1 MIACVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPKKSGPTLNETFLG 60
M CVAV+ +N PLYI+S ++ L+ H+++H SLDVVDE+++ K+ E +LG
Sbjct: 1 MAVCVAVIAKENYPLYIRS-VPTENELQFHYMLHTSLDVVDEKISAMGKALVDQRELYLG 59
Query: 61 LLYPTENYK--VYGYLTNTKVKFILV--TTDLDVRDADVRNFFRRFHAAYIDAVSNPFHV 116
LLYPTE+YK YGY+TN+KVKF++V +++ +RD ++R+ FR+ H++Y D + NPF+
Sbjct: 60 LLYPTEDYKRCSYGYVTNSKVKFVMVVDSSNTALRDNEIRSMFRKLHSSYTDVMCNPFYT 119
Query: 117 PGKKITSRTFAERVSTIV 134
PG +I SR F V+ ++
Sbjct: 120 PGDRIQSRAFDSMVTAMM 137
>UNIPROTKB|F1MIB4 [details] [associations]
symbol:TRAPPC2L "Trafficking protein particle complex
subunit 2-like protein" species:9913 "Bos taurus" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=IEA] InterPro:IPR006722 InterPro:IPR011012
Pfam:PF04628 GO:GO:0005737 GO:GO:0006888 SUPFAM:SSF64356
PANTHER:PTHR12403 IPI:IPI00854544 OMA:CNPFYIP
GeneTree:ENSGT00510000047505 EMBL:DAAA02046256
Ensembl:ENSBTAT00000025533 Uniprot:F1MIB4
Length = 139
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 60/126 (47%), Positives = 91/126 (72%)
Query: 11 QNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPKKSGPTLNETFLGLLYPTENYKV 70
QN PLYI+S ++ LK H++VH SLDVVDE+++ K+ E +LGLLYPTE+YKV
Sbjct: 11 QNYPLYIRSIP-TENELKFHYMVHTSLDVVDEKISAMGKALVDQRELYLGLLYPTEDYKV 69
Query: 71 YGYLTNTKVKFILV--TTDLDVRDADVRNFFRRFHAAYIDAVSNPFHVPGKKITSRTFAE 128
YGY+TN+KVKF++V +++ +RD ++R+ FR+ H +Y D + NPF+ PG +I SR F
Sbjct: 70 YGYVTNSKVKFVMVVDSSNTALRDNEIRSMFRKLHNSYTDVMCNPFYNPGDRIQSRAFDG 129
Query: 129 RVSTIV 134
V++++
Sbjct: 130 MVTSMM 135
>FB|FBgn0033605 [details] [associations]
symbol:CG9067 species:7227 "Drosophila melanogaster"
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 EMBL:AE013599 GO:GO:0005622
GO:GO:0006888 SUPFAM:SSF64356 PANTHER:PTHR12403 eggNOG:NOG238004
OMA:CNPFYIP GeneTree:ENSGT00510000047505 RefSeq:NP_610662.1
UniGene:Dm.16172 ProteinModelPortal:A1Z8I0 SMR:A1Z8I0 STRING:A1Z8I0
PRIDE:A1Z8I0 EnsemblMetazoa:FBtr0088182 GeneID:36197
KEGG:dme:Dmel_CG9067 UCSC:CG9067-RA FlyBase:FBgn0033605
InParanoid:A1Z8I0 OrthoDB:EOG4J6Q79 PhylomeDB:A1Z8I0
GenomeRNAi:36197 NextBio:797298 Bgee:A1Z8I0 Uniprot:A1Z8I0
Length = 138
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 57/136 (41%), Positives = 92/136 (67%)
Query: 1 MIACVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPKKSGPTLNETFLG 60
M C+AV+G N PLY+ + ++ + L+L + V+ +LDVV+E+ K P E +LG
Sbjct: 1 MAFCIAVIGKDNAPLYLTT-SDMEQELELQYHVNAALDVVEEKCLIGK-GAPESKELYLG 58
Query: 61 LLYPTENYKVYGYLTNTKVKFILV--TTDLDVRDADVRNFFRRFHAAYIDAVSNPFHVPG 118
LLY TEN+K+YG++TNT+VKFI+V ++++ +R+ +VR FR H Y DA+ NPF++PG
Sbjct: 59 LLYSTENHKIYGFVTNTRVKFIVVIDSSNVALRENEVRAIFRNLHLLYTDAICNPFYIPG 118
Query: 119 KKITSRTFAERVSTIV 134
+ +TS+ F V ++
Sbjct: 119 ESLTSKKFDRAVQKLM 134
>UNIPROTKB|H3BUK6 [details] [associations]
symbol:TRAPPC2L "Trafficking protein particle complex
subunit 2-like protein" species:9606 "Homo sapiens" [GO:0005622
"intracellular" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 GO:GO:0005622 GO:GO:0006888
SUPFAM:SSF64356 EMBL:AC092384 PANTHER:PTHR12403 HGNC:HGNC:30887
ProteinModelPortal:H3BUK6 SMR:H3BUK6 Ensembl:ENST00000567895
Bgee:H3BUK6 Uniprot:H3BUK6
Length = 109
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 50/105 (47%), Positives = 77/105 (73%)
Query: 32 IVHCSLDVVDERVNNPKKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFILV--TTDLD 89
+VH SLDVVDE+++ K+ E +LGLLYPTE+YKVYGY+TN+KVKF++V +++
Sbjct: 1 MVHTSLDVVDEKISAMGKALVDQRELYLGLLYPTEDYKVYGYVTNSKVKFVMVVDSSNTA 60
Query: 90 VRDADVRNFFRRFHAAYIDAVSNPFHVPGKKITSRTFAERVSTIV 134
+RD ++R+ FR+ H +Y D + NPF+ PG +I SR F V++++
Sbjct: 61 LRDNEIRSMFRKLHNSYTDVMCNPFYNPGDRIQSRAFDNMVTSMM 105
>WB|WBGene00044604 [details] [associations]
symbol:T10F2.5 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0005801 "cis-Golgi
network" evidence=IEA] InterPro:IPR006722 InterPro:IPR011012
Pfam:PF04628 GO:GO:0005622 GO:GO:0006888 SUPFAM:SSF64356
EMBL:FO081201 EMBL:FO081619 PANTHER:PTHR12403
GeneTree:ENSGT00510000047505 RefSeq:NP_001033370.1
UniGene:Cel.32560 ProteinModelPortal:G4SNB8 SMR:G4SNB8
EnsemblMetazoa:T10F2.5 GeneID:3896754 KEGG:cel:CELE_T10F2.5
CTD:3896754 WormBase:T10F2.5 OMA:EIRLIFK NextBio:958833
Uniprot:G4SNB8
Length = 137
Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 41/114 (35%), Positives = 66/114 (57%)
Query: 23 ADDALKLHHIVHCSLDVVDERVNNPKKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFI 82
A L++ CSLD+VDE+ + K S E FLG LY + ++ +GY+TNT V+ I
Sbjct: 26 AQQLLEIEMFTFCSLDIVDEK--STKAS-----EMFLGQLYNDQKWRSFGYITNTGVRMI 78
Query: 83 LV---TTDLDVRDADVRNFFRRFHAAYIDAVSNPFHVPGKKITSRTFAERVSTI 133
LV T+ ++D ++R F+RFH Y + +SNPF+ G + S+ E ++ +
Sbjct: 79 LVLDATSAASLKDQEIRLIFKRFHGHYCNTISNPFYEIGTPMQSKWLDEGINDL 132
>UNIPROTKB|H3BPN3 [details] [associations]
symbol:TRAPPC2L "Trafficking protein particle complex
subunit 2-like protein" species:9606 "Homo sapiens" [GO:0005622
"intracellular" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 GO:GO:0005622 GO:GO:0006888
SUPFAM:SSF64356 EMBL:AC092384 PANTHER:PTHR12403 HGNC:HGNC:30887
Ensembl:ENST00000564404 Ensembl:ENST00000565205 Uniprot:H3BPN3
Length = 75
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 35/70 (50%), Positives = 50/70 (71%)
Query: 1 MIACVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPKKSGPTLNETFLG 60
M C+AV+ +N PLYI+S T ++ LK H++VH SLDVVDE+++ K+ E +LG
Sbjct: 1 MAVCIAVIAKENYPLYIRS-TPTENELKFHYMVHTSLDVVDEKISAMGKALVDQRELYLG 59
Query: 61 LLYPTENYKV 70
LLYPTE+YK+
Sbjct: 60 LLYPTEDYKL 69
>ZFIN|ZDB-GENE-040801-249 [details] [associations]
symbol:trappc2l "trafficking protein particle
complex 2-like" species:7955 "Danio rerio" [GO:0006810 "transport"
evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 ZFIN:ZDB-GENE-040801-249
GO:GO:0005622 GO:GO:0006888 SUPFAM:SSF64356 PANTHER:PTHR12403
eggNOG:NOG238004 OrthoDB:EOG4N8R62 EMBL:BC076455 EMBL:BC154657
IPI:IPI00851404 UniGene:Dr.86782 InParanoid:Q6DG96 OMA:TEDYKVX
NextBio:20831876 Uniprot:Q6DG96
Length = 71
Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 35/71 (49%), Positives = 48/71 (67%)
Query: 1 MIACVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPKKSGPTLNETFLG 60
M C+AV+ +N PLYI+S + LK H+ VH SLDVV+E+++ K+ E +LG
Sbjct: 1 MAVCIAVIAKENYPLYIRSVPTQGE-LKFHYTVHTSLDVVEEKISGVGKALADQRELYLG 59
Query: 61 LLYPTENYKVY 71
LLYPTE+YKVY
Sbjct: 60 LLYPTEDYKVY 70
>POMBASE|SPAC15A10.12c [details] [associations]
symbol:SPAC15A10.12c "TRAPP complex subunit 2-like
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISM] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 PomBase:SPAC15A10.12c GO:GO:0005829
GO:GO:0005634 GO:GO:0005794 EMBL:CU329670 GO:GO:0006888
SUPFAM:SSF64356 PANTHER:PTHR12403 PIR:T37712 RefSeq:NP_594299.2
EnsemblFungi:SPAC15A10.12c.1 GeneID:2542766 KEGG:spo:SPAC15A10.12c
eggNOG:KOG3444 OMA:NDGERTS OrthoDB:EOG4H49D5 NextBio:20803811
Uniprot:O13732
Length = 148
Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 42/142 (29%), Positives = 75/142 (52%)
Query: 5 VAVVGHQNNPLYIQSFTEADDAL--KLHHIVHCSLDVVDERVNNPKKSGPTLNETFLGLL 62
+++ G ++ LY++ + L + ++ SLDV+++ VN+ ++ T N+ FLGLL
Sbjct: 9 LSIAGPKDEQLYLEIIDPKEKHLLARYQYLGELSLDVINDLVNDGER---TSNDCFLGLL 65
Query: 63 YPTENYKVYGYLTNTKVKFILVTT--DLDVRDADVRNFFRRFHAAYIDAVSNPFHV---P 117
E+ Y + +NTKVKFIL D V++ ++R RR + + AV NPF + P
Sbjct: 66 GVEEDISTYAFYSNTKVKFILAVKAPDYVVKETEIRQLLRRIYTIHTHAVCNPFSMDLTP 125
Query: 118 GKKITSRTFAERVSTIVKSFGL 139
TS F E + ++ + +
Sbjct: 126 ETLKTSIYFKESLHQLISDWNI 147
>UNIPROTKB|H3BQQ8 [details] [associations]
symbol:TRAPPC2L "Trafficking protein particle complex
subunit 2-like protein" species:9606 "Homo sapiens" [GO:0005622
"intracellular" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 GO:GO:0005622 GO:GO:0006888
SUPFAM:SSF64356 EMBL:AC092384 PANTHER:PTHR12403 HGNC:HGNC:30887
ProteinModelPortal:H3BQQ8 SMR:H3BQQ8 Ensembl:ENST00000561840
Bgee:H3BQQ8 Uniprot:H3BQQ8
Length = 129
Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 31/86 (36%), Positives = 56/86 (65%)
Query: 51 GPTLNETFLGLLYPTENYKVYGYLTNTKVKFILV--TTDLDVRDADVRNFFRRFHAAYID 108
GP+ + +P + + YGY+TN+KVKF++V +++ +RD ++R+ FR+ H +Y D
Sbjct: 41 GPSTGSPCVTSAFPNQLCR-YGYVTNSKVKFVMVVDSSNTALRDNEIRSMFRKLHNSYTD 99
Query: 109 AVSNPFHVPGKKITSRTFAERVSTIV 134
+ NPF+ PG +I SR F V++++
Sbjct: 100 VMCNPFYNPGDRIQSRAFDNMVTSMM 125
>DICTYBASE|DDB_G0282887 [details] [associations]
symbol:trappc2 "trafficking protein particle complex
subunit 2" species:44689 "Dictyostelium discoideum" [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 dictyBase:DDB_G0282887
GO:GO:0005783 GO:GO:0005794 GO:GO:0048471 EMBL:AAFI02000047
GenomeReviews:CM000152_GR GO:GO:0006888 SUPFAM:SSF64356 OMA:VGHNDNP
PANTHER:PTHR12403 eggNOG:COG5603 HSSP:Q9CQP2 RefSeq:XP_639381.1
ProteinModelPortal:Q54RV6 STRING:Q54RV6 EnsemblProtists:DDB0266387
GeneID:8623820 KEGG:ddi:DDB_G0282887 Uniprot:Q54RV6
Length = 133
Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 41/130 (31%), Positives = 65/130 (50%)
Query: 7 VVGHQNNPLYIQSF---TEADDALKLHHIVHCSLDVVDERVNNPKKSGPTLNETFLGLLY 63
++G +NPLY F + + L +I H SLD+V+E V KS N +L ++
Sbjct: 8 IIGKNDNPLYEIEFPITVQKKETYVLQYIAHGSLDIVEEHV---WKS----NNMYLKIID 60
Query: 64 PTENYKVYGYLTNTKVKFILVTTDLDVRDADVRNFFRRFHAAYIDAVSNPFHVPGKKITS 123
++ ++T +KF+L+ D DA ++NFF H Y+ + NPF+ K ITS
Sbjct: 61 KFNKVQISSFVTAGHIKFLLLHEKKD-EDA-IKNFFVEVHDLYLKILLNPFYEYNKPITS 118
Query: 124 RTFAERVSTI 133
F +V I
Sbjct: 119 TAFDAKVRKI 128
>TAIR|locus:2198983 [details] [associations]
symbol:AT1G80500 "AT1G80500" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 EMBL:CP002684 GO:GO:0005622
GO:GO:0006888 SUPFAM:SSF64356 OMA:VGHNDNP PANTHER:PTHR12403
IPI:IPI00548390 RefSeq:NP_178165.2 UniGene:At.43306
ProteinModelPortal:F4HTY0 SMR:F4HTY0 PRIDE:F4HTY0
EnsemblPlants:AT1G80500.1 GeneID:844389 KEGG:ath:AT1G80500
Uniprot:F4HTY0
Length = 135
Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 41/140 (29%), Positives = 71/140 (50%)
Query: 3 ACVAVVGHQNNPLY---IQSFTEADDALKLHH-IVHCSLDVVDERVNNPKKSGPTLNETF 58
AC +VG + P+Y + S + +DA +LH I+H +LDVV + T + F
Sbjct: 5 ACFIIVGRNDIPIYEAEVGSAAKREDAAQLHQFILHAALDVVQDLAW-------TTSAMF 57
Query: 59 LGLLYPTENYKVYGYLTNTKVKFILVTTDLDVRDAD-VRNFFRRFHAAYIDAVSNPFHVP 117
L + + V Y+T + +L+ D R+ D +++FF+ H YI + NP ++P
Sbjct: 58 LKSVDRFNDLVVSVYVTAGHTRLMLLH---DSRNEDGIKSFFQEVHELYIKILLNPLYLP 114
Query: 118 GKKITSRTFAERVSTIVKSF 137
G +ITS F +V + + +
Sbjct: 115 GSRITSSHFDTKVRALARKY 134
>UNIPROTKB|G1K394 [details] [associations]
symbol:TRAPPC2 "Trafficking protein particle complex
subunit 2" species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IEA] InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628
GO:GO:0005622 GO:GO:0006888 SUPFAM:SSF64356 EMBL:AC003037
HGNC:HGNC:23068 ChiTaRS:TRAPPC2 PANTHER:PTHR12403
ProteinModelPortal:G1K394 SMR:G1K394 PRIDE:G1K394
Ensembl:ENST00000453655 ArrayExpress:G1K394 Bgee:G1K394
Uniprot:G1K394
Length = 147
Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 47/146 (32%), Positives = 72/146 (49%)
Query: 7 VVGHQNNPLYIQSFTEA------DDALKLHH-IVHCSLDVVDERV---NNPK-KSGPTLN 55
+VGH +NP++ F A DD L+ I H +LD+VDE + NN K+ N
Sbjct: 9 IVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMYLKTVDKFN 68
Query: 56 ETFLGLLYPTENYKVYGYLTNTKVKFILVTTDLDVRDAD-VRNFFRRFHAAYIDAVSNPF 114
E F+ + T + + +L K++FI++ D+R D ++NFF + YI NPF
Sbjct: 69 EWFVSA-FVTAGH-ILTFLV--KMRFIMLH---DIRQEDGIKNFFTDVYDLYIKFSMNPF 121
Query: 115 HVPGKKITSRTFAERVSTIVKSFGLS 140
+ P I S F +V + K LS
Sbjct: 122 YEPNSPIRSSAFDRKVQFLGKKHLLS 147
>UNIPROTKB|G5EA75 [details] [associations]
symbol:TRAPPC2 "Trafficking protein particle complex
subunit 2" species:9823 "Sus scrofa" [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006722 InterPro:IPR011012
Pfam:PF04628 GO:GO:0005622 GO:GO:0006888 SUPFAM:SSF64356
OMA:VGHNDNP PANTHER:PTHR12403 GeneTree:ENSGT00510000047168
EMBL:CU633939 Ensembl:ENSSSCT00000013263 Uniprot:G5EA75
Length = 144
Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 46/146 (31%), Positives = 68/146 (46%)
Query: 7 VVGHQNNPLYIQSFTEA------DDALKLHH-IVHCSLDVVDERV---NNPK-KSGPTLN 55
+VGH +NP++ F A DD L+ I H +LD+VDE + NN K+ N
Sbjct: 9 IVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMYLKTVDKFN 68
Query: 56 ETFLGLLYPTENYKVYGYLTNTKVKFILVTTDLDVRDAD-VRNFFRRFHAAYIDAVSNPF 114
E F+ + +Y ++FI++ DVR D ++NFF + YI NPF
Sbjct: 69 EWFVSAFVTAGHILIY-------MRFIMLH---DVRQEDGIKNFFTDVYDLYIKFAMNPF 118
Query: 115 HVPGKKITSRTFAERVSTIVKSFGLS 140
+ P I S F +V + K LS
Sbjct: 119 YEPNSPIRSSAFDRKVQFLGKKHLLS 144
>UNIPROTKB|Q3T0F2 [details] [associations]
symbol:TRAPPC2 "Trafficking protein particle complex
subunit 2" species:9913 "Bos taurus" [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 GO:GO:0005783 GO:GO:0005634
GO:GO:0005794 GO:GO:0048471 GO:GO:0006351 GO:GO:0006888
SUPFAM:SSF64356 CTD:6399 OMA:VGHNDNP PANTHER:PTHR12403
EMBL:BC102418 IPI:IPI00696352 RefSeq:NP_001029968.1
UniGene:Bt.13900 ProteinModelPortal:Q3T0F2 SMR:Q3T0F2 STRING:Q3T0F2
PRIDE:Q3T0F2 Ensembl:ENSBTAT00000014509 GeneID:616748
KEGG:bta:616748 eggNOG:COG5603 GeneTree:ENSGT00510000047168
HOGENOM:HOG000214139 HOVERGEN:HBG006717 InParanoid:Q3T0F2
OrthoDB:EOG49GKHT NextBio:20900300 Uniprot:Q3T0F2
Length = 140
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 45/142 (31%), Positives = 67/142 (47%)
Query: 7 VVGHQNNPLYIQSFTEA------DDALKLHH-IVHCSLDVVDERVNNPKKSGPTLNETFL 59
+VGH +NP++ F A DD L+ I H +LD+VDE N S N +L
Sbjct: 9 IVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDE---NMWLS----NNMYL 61
Query: 60 GLLYPTENYKVYGYLTNTKVKFILVTTDLDVRDAD-VRNFFRRFHAAYIDAVSNPFHVPG 118
+ + V ++T ++FI++ DVR D ++NFF + YI NPF+ P
Sbjct: 62 KTVDKFNEWFVSAFVTAGHMRFIMLH---DVRQEDGIKNFFTDVYDLYIKFAMNPFYEPN 118
Query: 119 KKITSRTFAERVSTIVKSFGLS 140
I S F +V + K LS
Sbjct: 119 SPIRSSAFDRKVQFLGKKHLLS 140
>UNIPROTKB|F1SRI0 [details] [associations]
symbol:TRAPPC2 "Trafficking protein particle complex
subunit 2" species:9823 "Sus scrofa" [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 GO:GO:0005783 GO:GO:0005634
GO:GO:0005794 GO:GO:0048471 GO:GO:0006351 GO:GO:0006888
SUPFAM:SSF64356 CTD:6399 PANTHER:PTHR12403
GeneTree:ENSGT00510000047168 EMBL:AY610478 EMBL:AK344004
EMBL:CU633939 RefSeq:NP_001231738.1 UniGene:Ssc.8205
ProteinModelPortal:F1SRI0 SMR:F1SRI0 PRIDE:F1SRI0
Ensembl:ENSSSCT00000033348 Ensembl:ENSSSCT00000034259
GeneID:100513447 KEGG:ssc:100513447 Uniprot:F1SRI0
Length = 140
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 45/142 (31%), Positives = 67/142 (47%)
Query: 7 VVGHQNNPLYIQSFTEA------DDALKLHH-IVHCSLDVVDERVNNPKKSGPTLNETFL 59
+VGH +NP++ F A DD L+ I H +LD+VDE N S N +L
Sbjct: 9 IVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDE---NMWLS----NNMYL 61
Query: 60 GLLYPTENYKVYGYLTNTKVKFILVTTDLDVRDAD-VRNFFRRFHAAYIDAVSNPFHVPG 118
+ + V ++T ++FI++ DVR D ++NFF + YI NPF+ P
Sbjct: 62 KTVDKFNEWFVSAFVTAGHMRFIMLH---DVRQEDGIKNFFTDVYDLYIKFAMNPFYEPN 118
Query: 119 KKITSRTFAERVSTIVKSFGLS 140
I S F +V + K LS
Sbjct: 119 SPIRSSAFDRKVQFLGKKHLLS 140
>UNIPROTKB|E2QV03 [details] [associations]
symbol:TRAPPC2 "Trafficking protein particle complex
subunit 2" species:9615 "Canis lupus familiaris" [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 GO:GO:0005783 GO:GO:0005634
GO:GO:0005794 GO:GO:0048471 GO:GO:0006351 GO:GO:0006888
SUPFAM:SSF64356 PANTHER:PTHR12403 Uniprot:E2QV03
Length = 140
Score = 133 (51.9 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 44/142 (30%), Positives = 67/142 (47%)
Query: 7 VVGHQNNPLYIQSFTEA------DDALKLHH-IVHCSLDVVDERVNNPKKSGPTLNETFL 59
+VGH +NP++ F A DD L+ I H +LD+VDE N S N +L
Sbjct: 9 IVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDE---NMWLS----NNMYL 61
Query: 60 GLLYPTENYKVYGYLTNTKVKFILVTTDLDVRDAD-VRNFFRRFHAAYIDAVSNPFHVPG 118
+ + V ++T ++FI++ D+R D ++NFF + YI NPF+ P
Sbjct: 62 KTVDKFNEWFVSAFVTAGHMRFIMLH---DIRQEDGIKNFFTDVYDLYIKFAMNPFYEPN 118
Query: 119 KKITSRTFAERVSTIVKSFGLS 140
I S F +V + K LS
Sbjct: 119 SPIRSSAFDRKVQFLGKKHLLS 140
>UNIPROTKB|P0DI81 [details] [associations]
symbol:TRAPPC2 "Trafficking protein particle complex
subunit 2" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0001501 "skeletal system development"
evidence=IMP] [GO:0044325 "ion channel binding" evidence=IPI]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 GO:GO:0006355
GO:GO:0006351 GO:GO:0001501 GO:GO:0006888 SUPFAM:SSF64356
EMBL:AC003037 EMBL:AF157065 EMBL:AF157062 EMBL:AF157063
EMBL:AF157064 EMBL:AK310542 EMBL:DA542477 EMBL:DB101396
EMBL:BC016915 EMBL:BC052618 IPI:IPI00005119 IPI:IPI00940542
IPI:IPI01025157 RefSeq:NP_001011658.1 RefSeq:NP_001122307.2
RefSeq:NP_055378.1 UniGene:Hs.592238 UniGene:Hs.622292
ProteinModelPortal:P0DI81 SMR:P0DI81 IntAct:P0DI81 PRIDE:P0DI81
DNASU:6399 Ensembl:ENST00000358231 Ensembl:ENST00000359680
Ensembl:ENST00000380579 Ensembl:ENST00000419678
Ensembl:ENST00000458511 GeneID:6399 KEGG:hsa:6399 UCSC:uc010nem.2
UCSC:uc022btf.1 CTD:6399 GeneCards:GC0XM013640 HGNC:HGNC:23068
HPA:CAB004665 MIM:300202 MIM:313400 neXtProt:NX_P0DI81 OMA:VGHNDNP
ChiTaRS:TRAPPC2 GenomeRNAi:6399 NextBio:24860 ArrayExpress:P0DI81
Bgee:P0DI81 CleanEx:HS_TRAPPC2 Genevestigator:O14582
GermOnline:ENSG00000196459 PANTHER:PTHR12403 Uniprot:P0DI81
Length = 140
Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 44/142 (30%), Positives = 67/142 (47%)
Query: 7 VVGHQNNPLYIQSFTEA------DDALKLHH-IVHCSLDVVDERVNNPKKSGPTLNETFL 59
+VGH +NP++ F A DD L+ I H +LD+VDE N S N +L
Sbjct: 9 IVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDE---NMWLS----NNMYL 61
Query: 60 GLLYPTENYKVYGYLTNTKVKFILVTTDLDVRDAD-VRNFFRRFHAAYIDAVSNPFHVPG 118
+ + V ++T ++FI++ D+R D ++NFF + YI NPF+ P
Sbjct: 62 KTVDKFNEWFVSAFVTAGHMRFIMLH---DIRQEDGIKNFFTDVYDLYIKFSMNPFYEPN 118
Query: 119 KKITSRTFAERVSTIVKSFGLS 140
I S F +V + K LS
Sbjct: 119 SPIRSSAFDRKVQFLGKKHLLS 140
>UNIPROTKB|P0DI82 [details] [associations]
symbol:TRAPPC2P1 "Trafficking protein particle complex
subunit 2 protein TRAPPC2P1" species:9606 "Homo sapiens"
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628
GO:GO:0005783 GO:GO:0005634 GO:GO:0005794 GO:GO:0048471
GO:GO:0006351 GO:GO:0006888 SUPFAM:SSF64356 IPI:IPI00005119
RefSeq:NP_001011658.1 RefSeq:NP_055378.1 UniGene:Hs.592238
UniGene:Hs.622292 DNASU:6399 GeneID:6399 KEGG:hsa:6399 CTD:6399
HPA:CAB004665 GenomeRNAi:6399 NextBio:24860 CleanEx:HS_TRAPPC2
PANTHER:PTHR12403 EMBL:AF291676 EMBL:AF058918 EMBL:AC003002
EMBL:BC008889 EMBL:BC032809 UniGene:Hs.446620
ProteinModelPortal:P0DI82 SMR:P0DI82 STRING:O14582 PRIDE:P0DI82
Ensembl:ENST00000543226 GeneCards:GC19P057874 HGNC:HGNC:10710
neXtProt:NX_P0DI82 ArrayExpress:P0DI82 Bgee:P0DI82 Uniprot:P0DI82
Length = 140
Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 44/142 (30%), Positives = 67/142 (47%)
Query: 7 VVGHQNNPLYIQSFTEA------DDALKLHH-IVHCSLDVVDERVNNPKKSGPTLNETFL 59
+VGH +NP++ F A DD L+ I H +LD+VDE N S N +L
Sbjct: 9 IVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDE---NMWLS----NNMYL 61
Query: 60 GLLYPTENYKVYGYLTNTKVKFILVTTDLDVRDAD-VRNFFRRFHAAYIDAVSNPFHVPG 118
+ + V ++T ++FI++ D+R D ++NFF + YI NPF+ P
Sbjct: 62 KTVDKFNEWFVSAFVTAGHMRFIMLH---DIRQEDGIKNFFTDVYDLYIKFSMNPFYEPN 118
Query: 119 KKITSRTFAERVSTIVKSFGLS 140
I S F +V + K LS
Sbjct: 119 SPIRSSAFDRKVQFLGKKHLLS 140
>RGD|1306925 [details] [associations]
symbol:Trappc2 "trafficking protein particle complex 2"
species:10116 "Rattus norvegicus" [GO:0001501 "skeletal system
development" evidence=ISO] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0030008 "TRAPP
complex" evidence=ISO] [GO:0044325 "ion channel binding"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISO] InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628
RGD:1306925 GO:GO:0005622 GO:GO:0006888 SUPFAM:SSF64356 CTD:6399
PANTHER:PTHR12403 eggNOG:COG5603 GeneTree:ENSGT00510000047168
HOGENOM:HOG000214139 HOVERGEN:HBG006717 OrthoDB:EOG49GKHT
EMBL:CH474014 EMBL:BC091429 IPI:IPI00212787 RefSeq:NP_001020136.1
UniGene:Rn.8274 SMR:Q5BJL8 STRING:Q5BJL8 Ensembl:ENSRNOT00000068113
GeneID:501550 KEGG:rno:501550 UCSC:RGD:1306925 InParanoid:Q5BJL8
NextBio:709167 Genevestigator:Q5BJL8 Uniprot:Q5BJL8
Length = 140
Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 45/142 (31%), Positives = 68/142 (47%)
Query: 7 VVGHQNNPLYIQSF-----TEA-DDALKLHH-IVHCSLDVVDERVNNPKKSGPTLNETFL 59
+VGH +NP++ F E+ DD L+ I H +LD+VDE N S N +L
Sbjct: 9 IVGHHDNPVFEMEFLPPGKAESKDDHRHLNQFIAHAALDLVDE---NMWLS----NNMYL 61
Query: 60 GLLYPTENYKVYGYLTNTKVKFILVTTDLDVRDAD-VRNFFRRFHAAYIDAVSNPFHVPG 118
+ + V ++T ++FI++ DVR D ++NFF + YI NPF+ P
Sbjct: 62 KTVDKFNEWFVSAFVTAGHMRFIMLH---DVRQEDGIKNFFTDVYDLYIKFAMNPFYEPN 118
Query: 119 KKITSRTFAERVSTIVKSFGLS 140
I S F +V + K LS
Sbjct: 119 SPIRSSAFDRKVQFLGKKHLLS 140
>POMBASE|SPBC11G11.04 [details] [associations]
symbol:trs20 "TRAPP complex subunit Trs20 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005801 "cis-Golgi network" evidence=IC] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006886 "intracellular protein transport"
evidence=IC] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISO] [GO:0030008 "TRAPP complex" evidence=ISO] [GO:0032313
"regulation of Rab GTPase activity" evidence=IC] [GO:0017112 "Rab
guanyl-nucleotide exchange factor activity" evidence=ISO]
InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628
PomBase:SPBC11G11.04 GO:GO:0005783 GO:GO:0005829 GO:GO:0005634
GO:GO:0006886 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0006888
GO:GO:0032313 SUPFAM:SSF64356 GO:GO:0030008 OMA:VGHNDNP
PANTHER:PTHR12403 eggNOG:COG5603 HOGENOM:HOG000214139 HSSP:Q9CQP2
PIR:T39331 RefSeq:NP_595722.1 ProteinModelPortal:Q9USZ5
STRING:Q9USZ5 EnsemblFungi:SPBC11G11.04.1 GeneID:2539833
KEGG:spo:SPBC11G11.04 OrthoDB:EOG479JHG NextBio:20800981
Uniprot:Q9USZ5
Length = 136
Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 40/145 (27%), Positives = 73/145 (50%)
Query: 1 MIACVAVVGHQNNPLY---IQSFTEA-DDALKLH---HIVHCSLDVVDERVNNPKKSGPT 53
M A A++G ++NP+Y + E D +L H IVH SLD+VD+ T
Sbjct: 1 MTAYAAIIGTKDNPVYELEMGPINEKLDRSLNSHLNQFIVHSSLDIVDQLQW-------T 53
Query: 54 LNETFLGLLYPTENYKVYGYLTNTKVKFILVTTDLDVRDAD-VRNFFRRFHAAYIDAVSN 112
N ++ + + Y+T + ++F+L+ + + AD ++ FF+ H YI + +
Sbjct: 54 SNAFYMKTIDQFHEMYISAYVTPSNMRFMLLHQN---QSADNIKLFFQELHELYIKTLMS 110
Query: 113 PFHVPGKKITSRTFAERVSTIVKSF 137
PF+ P + I S+ F +V +I + +
Sbjct: 111 PFYQPNQPIRSQAFDLKVRSIARRY 135
>RGD|6499350 [details] [associations]
symbol:LOC100910318 "trafficking protein particle complex
subunit 2-like" species:10116 "Rattus norvegicus" [GO:0005634
"nucleus" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 GO:GO:0006351
GO:GO:0006888 SUPFAM:SSF64356 EMBL:CH473948 OMA:VGHNDNP
PANTHER:PTHR12403 GeneTree:ENSGT00510000047168 OrthoDB:EOG49GKHT
EMBL:AC105470 IPI:IPI00817107 RefSeq:NP_001258040.1
RefSeq:NP_001258041.1 Ensembl:ENSRNOT00000006006 GeneID:100910318
KEGG:rno:100910318 Uniprot:D3ZVF4
Length = 140
Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 44/142 (30%), Positives = 68/142 (47%)
Query: 7 VVGHQNNPLYIQSF-----TEADDALK-LHH-IVHCSLDVVDERVNNPKKSGPTLNETFL 59
+VGH +NP++ F TE+ D + L+ I H +LD+VDE N S N +L
Sbjct: 9 IVGHHDNPVFEMEFLPAGKTESKDEHRHLNQFIAHAALDLVDE---NMWLS----NNMYL 61
Query: 60 GLLYPTENYKVYGYLTNTKVKFILVTTDLDVRDAD-VRNFFRRFHAAYIDAVSNPFHVPG 118
+ + V ++T ++ I++ DVR D ++NFF + YI NPF+ P
Sbjct: 62 KTVDKFNEWFVSAFVTAGHMRLIMLH---DVRQEDGIKNFFTDVYDLYIKFAMNPFYEPN 118
Query: 119 KKITSRTFAERVSTIVKSFGLS 140
I S F +V + K LS
Sbjct: 119 SPIRSTAFERKVQFLGKKHLLS 140
>WB|WBGene00021046 [details] [associations]
symbol:sedl-1 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0005801 "cis-Golgi
network" evidence=IEA] InterPro:IPR006722 InterPro:IPR011012
Pfam:PF04628 GO:GO:0005783 GO:GO:0005794 GO:GO:0048471
GO:GO:0006888 SUPFAM:SSF64356 OMA:VGHNDNP PANTHER:PTHR12403
eggNOG:COG5603 GeneTree:ENSGT00510000047168 HOGENOM:HOG000214139
EMBL:FO080991 PIR:T29507 RefSeq:NP_508272.1 HSSP:Q9CQP2
ProteinModelPortal:O02173 SMR:O02173 IntAct:O02173 STRING:O02173
PaxDb:O02173 EnsemblMetazoa:W05H7.3 GeneID:180478
KEGG:cel:CELE_W05H7.3 UCSC:W05H7.3 CTD:180478 WormBase:W05H7.3
InParanoid:O02173 NextBio:909558 Uniprot:O02173
Length = 141
Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 32/134 (23%), Positives = 65/134 (48%)
Query: 6 AVVGHQNNPLYIQSFT-------EADDALKLHHIV-HCSLDVVDERVNNPKKSGPTLNET 57
A++GH + P++ F E++ L+H + H +LD+VDE T ++
Sbjct: 9 AIIGHCDQPIFEMDFPVGEKKTKESEGTRHLNHYIGHAALDIVDEHAL-------TTSQM 61
Query: 58 FLGLLYPTENYKVYGYLTNTKVKFILVTTDLDVRDADVRNFFRRFHAAYIDAVSNPFHVP 117
+L ++ + V ++T ++++FI++ T D ++ FF+ + YI NPF+
Sbjct: 62 YLKMVDKFNEWYVSAFVTASRIRFIMLHTHR--ADEGIKQFFQEMYETYIKHAMNPFYEI 119
Query: 118 GKKITSRTFAERVS 131
I S F ++ +
Sbjct: 120 DDVIESPAFEQKAT 133
>UNIPROTKB|O02173 [details] [associations]
symbol:sedl-1 "Probable trafficking protein particle
complex subunit 2" species:6239 "Caenorhabditis elegans"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 GO:GO:0005783 GO:GO:0005794
GO:GO:0048471 GO:GO:0006888 SUPFAM:SSF64356 OMA:VGHNDNP
PANTHER:PTHR12403 eggNOG:COG5603 GeneTree:ENSGT00510000047168
HOGENOM:HOG000214139 EMBL:FO080991 PIR:T29507 RefSeq:NP_508272.1
HSSP:Q9CQP2 ProteinModelPortal:O02173 SMR:O02173 IntAct:O02173
STRING:O02173 PaxDb:O02173 EnsemblMetazoa:W05H7.3 GeneID:180478
KEGG:cel:CELE_W05H7.3 UCSC:W05H7.3 CTD:180478 WormBase:W05H7.3
InParanoid:O02173 NextBio:909558 Uniprot:O02173
Length = 141
Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 32/134 (23%), Positives = 65/134 (48%)
Query: 6 AVVGHQNNPLYIQSFT-------EADDALKLHHIV-HCSLDVVDERVNNPKKSGPTLNET 57
A++GH + P++ F E++ L+H + H +LD+VDE T ++
Sbjct: 9 AIIGHCDQPIFEMDFPVGEKKTKESEGTRHLNHYIGHAALDIVDEHAL-------TTSQM 61
Query: 58 FLGLLYPTENYKVYGYLTNTKVKFILVTTDLDVRDADVRNFFRRFHAAYIDAVSNPFHVP 117
+L ++ + V ++T ++++FI++ T D ++ FF+ + YI NPF+
Sbjct: 62 YLKMVDKFNEWYVSAFVTASRIRFIMLHTHR--ADEGIKQFFQEMYETYIKHAMNPFYEI 119
Query: 118 GKKITSRTFAERVS 131
I S F ++ +
Sbjct: 120 DDVIESPAFEQKAT 133
>ZFIN|ZDB-GENE-060929-1266 [details] [associations]
symbol:trappc2 "trafficking protein particle
complex 2" species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 ZFIN:ZDB-GENE-060929-1266
GO:GO:0005783 GO:GO:0005794 GO:GO:0048471 GO:GO:0006888
SUPFAM:SSF64356 CTD:6399 PANTHER:PTHR12403 eggNOG:COG5603
GeneTree:ENSGT00510000047168 HOGENOM:HOG000214139
HOVERGEN:HBG006717 OrthoDB:EOG49GKHT EMBL:BC124169 IPI:IPI00806101
RefSeq:NP_001070243.1 UniGene:Dr.16486 ProteinModelPortal:Q08CN0
SMR:Q08CN0 STRING:Q08CN0 Ensembl:ENSDART00000099693 GeneID:767808
KEGG:dre:767808 InParanoid:Q08CN0 NextBio:20918186
ArrayExpress:Q08CN0 Bgee:Q08CN0 Uniprot:Q08CN0
Length = 140
Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 43/142 (30%), Positives = 67/142 (47%)
Query: 7 VVGHQNNPLYIQSF-----TEA-DDALKLHH-IVHCSLDVVDERVNNPKKSGPTLNETFL 59
+VGH +NP++ F E+ DD L+ I H +LD+VDE N S N +L
Sbjct: 9 MVGHHDNPVFELEFLPPGKAESKDDHRHLNQFIAHAALDLVDE---NMWLS----NNMYL 61
Query: 60 GLLYPTENYKVYGYLTNTKVKFILVTTDLDVRDAD-VRNFFRRFHAAYIDAVSNPFHVPG 118
+ + V ++T ++FI++ DVR D ++NFF + Y+ NPF+
Sbjct: 62 KTVDKFNEWFVSAFVTAGHMRFIMLH---DVRQEDGIKNFFNDVYDLYVKFAMNPFYEVN 118
Query: 119 KKITSRTFAERVSTIVKSFGLS 140
I S F +V + K LS
Sbjct: 119 APIRSTAFERKVQFLGKKHLLS 140
>UNIPROTKB|Q5ZKP4 [details] [associations]
symbol:TRAPPC2 "Trafficking protein particle complex
subunit 2" species:9031 "Gallus gallus" [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628
GO:GO:0005783 GO:GO:0005794 GO:GO:0048471 GO:GO:0006888
SUPFAM:SSF64356 CTD:6399 OMA:VGHNDNP PANTHER:PTHR12403
eggNOG:COG5603 GeneTree:ENSGT00510000047168 HOGENOM:HOG000214139
HOVERGEN:HBG006717 OrthoDB:EOG49GKHT EMBL:AJ720040
EMBL:AADN02011353 IPI:IPI00570779 RefSeq:NP_001006263.1
UniGene:Gga.7014 STRING:Q5ZKP4 Ensembl:ENSGALT00000026761
GeneID:418634 KEGG:gga:418634 InParanoid:Q5ZKP4 NextBio:20821790
Uniprot:Q5ZKP4
Length = 140
Score = 114 (45.2 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 44/146 (30%), Positives = 69/146 (47%)
Query: 7 VVGHQNNPLYIQSF-----TEA-DDALKLHH-IVHCSLDVVDERV---NNPK-KSGPTLN 55
+VGH +NP++ F E+ DD L+ I H +LD+VDE + NN K+ N
Sbjct: 9 IVGHHDNPVFEMEFLPPGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMYLKTVDKFN 68
Query: 56 ETFLGLLYPTENYKVYGYLTNTKVKFILVTTDLDVRDAD-VRNFFRRFHAAYIDAVSNPF 114
E F+ + ++ + ++FI++ DVR D ++NFF + YI NPF
Sbjct: 69 EWFVS---------AFAFVLH--MRFIMLH---DVRQEDGIKNFFNDVYDLYIKFAMNPF 114
Query: 115 HVPGKKITSRTFAERVSTIVKSFGLS 140
+ I S F +V + K LS
Sbjct: 115 YELNSPIRSSAFERKVQFLGKKHLLS 140
>SGD|S000000458 [details] [associations]
symbol:TRS20 "Subunit of the transport protein particle
(TRAPP) complex" species:4932 "Saccharomyces cerevisiae"
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006914 "autophagy" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0000407
"pre-autophagosomal structure" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA;IGI;IMP] [GO:0030008
"TRAPP complex" evidence=IDA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016192 "vesicle-mediated transport" evidence=IEA]
InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628 SGD:S000000458
GO:GO:0005783 GO:GO:0006914 EMBL:BK006936 GO:GO:0006888 EMBL:X70529
SUPFAM:SSF64356 GO:GO:0000407 GO:GO:0030008 OMA:VGHNDNP
PANTHER:PTHR12403 eggNOG:COG5603 GeneTree:ENSGT00510000047168
HOGENOM:HOG000214139 OrthoDB:EOG479JHG EMBL:Z36123 PIR:S32957
RefSeq:NP_009813.1 ProteinModelPortal:P38334 SMR:P38334
DIP:DIP-1711N IntAct:P38334 MINT:MINT-407365 STRING:P38334
PaxDb:P38334 EnsemblFungi:YBR254C GeneID:852556 KEGG:sce:YBR254C
CYGD:YBR254c NextBio:971655 Genevestigator:P38334
GermOnline:YBR254C Uniprot:P38334
Length = 175
Score = 86 (35.3 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 19/83 (22%), Positives = 42/83 (50%)
Query: 58 FLGLLYPTENYKVYGYLTNTKVKFILV-----TTDLDVRDADVRNFFRRFHAAYIDAVSN 112
+LG + + Y++ + +KF+++ + + + D ++R+F++ H Y+ + N
Sbjct: 88 YLGKVDHFYGLAITAYISYSGMKFVMIHGNSANSSVVIDDNNMRSFYQEVHELYVKTLMN 147
Query: 113 PFHVPGKKITSRTFAERVSTIVK 135
PF+ I S F RV T+ +
Sbjct: 148 PFYKITDPIRSPAFDSRVRTLAR 170
Score = 65 (27.9 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 16/45 (35%), Positives = 28/45 (62%)
Query: 6 AVVGHQNNPLYIQSFTEAD-------DALKLH-HIVHCSLDVVDE 42
A++G ++NP+Y FT A+ D +L+ I+H SLD+V++
Sbjct: 6 AIIGKKDNPVYEIEFTNAENPQGFPQDLKELNPFILHASLDIVED 50
>FB|FBgn0263604 [details] [associations]
symbol:l(3)72Dh "lethal (3) 72Dh" species:7227 "Drosophila
melanogaster" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005622 "intracellular" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0007224 "smoothened
signaling pathway" evidence=IGI] [GO:0033227 "dsRNA transport"
evidence=IMP] InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628
GO:GO:0005783 GO:GO:0005794 GO:GO:0048471 EMBL:AE014296
GO:GO:0006888 GO:GO:0033227 SUPFAM:SSF64356 GO:GO:0007224
OMA:VGHNDNP PANTHER:PTHR12403 eggNOG:COG5603
GeneTree:ENSGT00510000047168 HSSP:Q9CQP2 EMBL:AY071561
RefSeq:NP_648841.1 UniGene:Dm.18901 ProteinModelPortal:Q9VUZ1
IntAct:Q9VUZ1 MINT:MINT-822446 STRING:Q9VUZ1 PaxDb:Q9VUZ1
EnsemblMetazoa:FBtr0075491 GeneID:39769 KEGG:dme:Dmel_CG5161
UCSC:CG5161-RA FlyBase:FBgn0036573 InParanoid:Q9VUZ1
OrthoDB:EOG43BK56 PhylomeDB:Q9VUZ1 GenomeRNAi:39769 NextBio:815287
Bgee:Q9VUZ1 Uniprot:Q9VUZ1
Length = 139
Score = 106 (42.4 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 39/145 (26%), Positives = 66/145 (45%)
Query: 7 VVGHQNNPLYIQSFTEADDALKL--H-H----IVHCSLDVVDER----VNNPKKSGPTLN 55
+VG +NP+Y + F+ + L+ H H I H +LD+VDE N KS N
Sbjct: 8 IVGQNDNPIYEKEFSTVNKELRKEDHRHLTQFIAHAALDLVDEHKWKTANMQLKSIDRFN 67
Query: 56 ETFLGLLYPTENYKVYGYLTNTKVKFILVTTDLDVRDADVRNFFRRFHAAYIDAVSNPFH 115
+ F V ++T ++++FI+V + + D ++NFF + YI N F+
Sbjct: 68 QWF-----------VSAFITASQIRFIIVHDNKN--DEGIKNFFNEMYDTYIKNSMNAFY 114
Query: 116 VPGKKITSRTFAERVSTIVKSFGLS 140
I S F ++ + + LS
Sbjct: 115 RINTPIKSPMFEKKSEIFGRKYLLS 139
>UNIPROTKB|H3BPS1 [details] [associations]
symbol:TRAPPC2L "Trafficking protein particle complex
subunit 2-like protein" species:9606 "Homo sapiens" [GO:0005622
"intracellular" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 GO:GO:0005622 GO:GO:0006888
SUPFAM:SSF64356 EMBL:AC092384 PANTHER:PTHR12403 HGNC:HGNC:30887
ProteinModelPortal:H3BPS1 SMR:H3BPS1 Ensembl:ENST00000564365
Bgee:H3BPS1 Uniprot:H3BPS1
Length = 59
Score = 102 (41.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 18/54 (33%), Positives = 37/54 (68%)
Query: 82 ILVTTDLDVRDADVRNFFRRFHAAYIDAVSNPFHVPGKKI-TSRTFAERVSTIV 134
++ +++ +RD ++R+ FR+ H +Y D + NPF+ PG +I +SR F V++++
Sbjct: 2 VVDSSNTALRDNEIRSMFRKLHNSYTDVMCNPFYNPGDRIQSSRAFDNMVTSMM 55
>UNIPROTKB|F5H785 [details] [associations]
symbol:TRAPPC2 "Trafficking protein particle complex
subunit 2" species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IEA] InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628
GO:GO:0005622 GO:GO:0006888 SUPFAM:SSF64356 EMBL:AC003037
HGNC:HGNC:23068 ChiTaRS:TRAPPC2 PANTHER:PTHR12403 IPI:IPI00979652
ProteinModelPortal:F5H785 SMR:F5H785 Ensembl:ENST00000519885
ArrayExpress:F5H785 Bgee:F5H785 Uniprot:F5H785
Length = 113
Score = 91 (37.1 bits), Expect = 0.00017, P = 0.00017
Identities = 33/109 (30%), Positives = 53/109 (48%)
Query: 7 VVGHQNNPLYIQSFTEA------DDALKLHH-IVHCSLDVVDERVNNPKKSGPTLNETFL 59
+VGH +NP++ F A DD L+ I H +LD+VDE N S N +L
Sbjct: 9 IVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDE---NMWLS----NNMYL 61
Query: 60 GLLYPTENYKVYGYLTNTKVKFILVTTDLDVRDAD-VRNFFRRFHAAYI 107
+ + V ++T ++FI++ D+R D ++NFF + YI
Sbjct: 62 KTVDKFNEWFVSAFVTAGHMRFIMLH---DIRQEDGIKNFFTDVYDLYI 107
>UNIPROTKB|Q17QI1 [details] [associations]
symbol:TRAPPC1 "Trafficking protein particle complex
subunit 1" species:9913 "Bos taurus" [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0030008 "TRAPP complex" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
InterPro:IPR007233 InterPro:IPR011012 Pfam:PF04099 GO:GO:0005783
GO:GO:0006888 SUPFAM:SSF64356 GO:GO:0030008 PANTHER:PTHR23249
GeneTree:ENSGT00510000047863 EMBL:BC118345 IPI:IPI00704726
RefSeq:NP_001069881.1 UniGene:Bt.22552 ProteinModelPortal:Q17QI1
SMR:Q17QI1 PRIDE:Q17QI1 Ensembl:ENSBTAT00000065281 GeneID:616205
KEGG:bta:616205 CTD:58485 HOVERGEN:HBG056032 OMA:FLYYKTN
OrthoDB:EOG45HRZS NextBio:20900014 Uniprot:Q17QI1
Length = 145
Score = 96 (38.9 bits), Expect = 0.00025, P = 0.00025
Identities = 26/84 (30%), Positives = 44/84 (52%)
Query: 61 LLYPTENYKVYGYLTNTKVKFILVTTDLDVRDADVRNFFRRFHAA-YID-AVSNPFHVPG 118
L + T YK++ Y T T +K +++ TDL V +R+ ++A Y++ V NP G
Sbjct: 62 LAFQTSRYKLHYYETPTGIK-VVMNTDLGV--GPIRDVLHHIYSALYVELVVKNPLCPLG 118
Query: 119 KKITSRTFAERVSTIVKSFGLSSA 142
+ + S F R+ + V+S SA
Sbjct: 119 QTVQSELFRSRLDSYVRSLPFFSA 142
>UNIPROTKB|E2RTE6 [details] [associations]
symbol:TRAPPC1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0030008 "TRAPP complex" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
InterPro:IPR007233 InterPro:IPR011012 Pfam:PF04099 GO:GO:0006888
SUPFAM:SSF64356 GO:GO:0030008 PANTHER:PTHR23249
GeneTree:ENSGT00510000047863 CTD:58485 OMA:FLYYKTN
EMBL:AAEX03003637 RefSeq:XP_536628.2 ProteinModelPortal:E2RTE6
SMR:E2RTE6 PRIDE:E2RTE6 Ensembl:ENSCAFT00000026747 GeneID:479490
KEGG:cfa:479490 NextBio:20854667 Uniprot:E2RTE6
Length = 145
Score = 96 (38.9 bits), Expect = 0.00025, P = 0.00025
Identities = 26/84 (30%), Positives = 44/84 (52%)
Query: 61 LLYPTENYKVYGYLTNTKVKFILVTTDLDVRDADVRNFFRRFHAA-YID-AVSNPFHVPG 118
L + T YK++ Y T T +K +++ TDL V +R+ ++A Y++ V NP G
Sbjct: 62 LAFQTSRYKLHYYETPTGIK-VVMNTDLGV--GPIRDVLHHIYSALYVELVVKNPLCPLG 118
Query: 119 KKITSRTFAERVSTIVKSFGLSSA 142
+ + S F R+ + V+S SA
Sbjct: 119 QTVQSELFRSRLDSYVRSLPFFSA 142
>UNIPROTKB|Q9Y5R8 [details] [associations]
symbol:TRAPPC1 "Trafficking protein particle complex
subunit 1" species:9606 "Homo sapiens" [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0030008 "TRAPP
complex" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] InterPro:IPR007233 InterPro:IPR011012 Pfam:PF04099
GO:GO:0005783 EMBL:CH471108 GO:GO:0006888 SUPFAM:SSF64356
GO:GO:0030008 eggNOG:NOG237222 HOGENOM:HOG000172118
PANTHER:PTHR23249 CTD:58485 HOVERGEN:HBG056032 OMA:FLYYKTN
OrthoDB:EOG45HRZS EMBL:AF129332 EMBL:BC032717 IPI:IPI00009654
RefSeq:NP_001160093.1 RefSeq:NP_067033.1 UniGene:Hs.24379
ProteinModelPortal:Q9Y5R8 SMR:Q9Y5R8 DIP:DIP-48285N IntAct:Q9Y5R8
STRING:Q9Y5R8 PhosphoSite:Q9Y5R8 DMDM:20177848 PaxDb:Q9Y5R8
PRIDE:Q9Y5R8 DNASU:58485 Ensembl:ENST00000303731
Ensembl:ENST00000540486 GeneID:58485 KEGG:hsa:58485 UCSC:uc002gjo.2
GeneCards:GC17M007833 HGNC:HGNC:19894 MIM:610969 neXtProt:NX_Q9Y5R8
PharmGKB:PA134988492 InParanoid:Q9Y5R8 ChiTaRS:TRAPPC1
GenomeRNAi:58485 NextBio:64938 Bgee:Q9Y5R8 CleanEx:HS_TRAPPC1
Genevestigator:Q9Y5R8 GermOnline:ENSG00000170043 Uniprot:Q9Y5R8
Length = 145
Score = 96 (38.9 bits), Expect = 0.00025, P = 0.00025
Identities = 26/84 (30%), Positives = 44/84 (52%)
Query: 61 LLYPTENYKVYGYLTNTKVKFILVTTDLDVRDADVRNFFRRFHAA-YID-AVSNPFHVPG 118
L + T YK++ Y T T +K +++ TDL V +R+ ++A Y++ V NP G
Sbjct: 62 LAFQTSRYKLHYYETPTGIK-VVMNTDLGV--GPIRDVLHHIYSALYVELVVKNPLCPLG 118
Query: 119 KKITSRTFAERVSTIVKSFGLSSA 142
+ + S F R+ + V+S SA
Sbjct: 119 QTVQSELFRSRLDSYVRSLPFFSA 142
>UNIPROTKB|F2Z5M0 [details] [associations]
symbol:TRAPPC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030008 "TRAPP complex" evidence=IEA] [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=IEA]
InterPro:IPR007233 InterPro:IPR011012 Pfam:PF04099 GO:GO:0006888
SUPFAM:SSF64356 GO:GO:0030008 PANTHER:PTHR23249
GeneTree:ENSGT00510000047863 OMA:FLYYKTN EMBL:CU972380
RefSeq:XP_003132004.1 UniGene:Ssc.1819 ProteinModelPortal:F2Z5M0
SMR:F2Z5M0 PRIDE:F2Z5M0 Ensembl:ENSSSCT00000031070 GeneID:100524173
KEGG:ssc:100524173 Uniprot:F2Z5M0
Length = 145
Score = 96 (38.9 bits), Expect = 0.00025, P = 0.00025
Identities = 26/84 (30%), Positives = 44/84 (52%)
Query: 61 LLYPTENYKVYGYLTNTKVKFILVTTDLDVRDADVRNFFRRFHAA-YID-AVSNPFHVPG 118
L + T YK++ Y T T +K +++ TDL V +R+ ++A Y++ V NP G
Sbjct: 62 LAFQTSRYKLHYYETPTGIK-VVMNTDLGV--GPIRDVLHHIYSALYVELVVKNPLCPLG 118
Query: 119 KKITSRTFAERVSTIVKSFGLSSA 142
+ + S F R+ + V+S SA
Sbjct: 119 QTVQSELFRSRLDSYVRSLPFFSA 142
>MGI|MGI:1098727 [details] [associations]
symbol:Trappc1 "trafficking protein particle complex 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005801 "cis-Golgi
network" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030008 "TRAPP
complex" evidence=IDA] InterPro:IPR007233 InterPro:IPR011012
Pfam:PF04099 MGI:MGI:1098727 GO:GO:0005783 GO:GO:0006888
SUPFAM:SSF64356 GO:GO:0030008 eggNOG:NOG237222 HOGENOM:HOG000172118
PANTHER:PTHR23249 GeneTree:ENSGT00510000047863 EMBL:AL645527
PDB:2J3T PDBsum:2J3T CTD:58485 HOVERGEN:HBG056032 OMA:FLYYKTN
OrthoDB:EOG45HRZS IPI:IPI00275577 RefSeq:NP_001019377.1
UniGene:Mm.28073 ProteinModelPortal:Q5NCF2 SMR:Q5NCF2 IntAct:Q5NCF2
STRING:Q5NCF2 PhosphoSite:Q5NCF2 PaxDb:Q5NCF2 PRIDE:Q5NCF2
Ensembl:ENSMUST00000102601 Ensembl:ENSMUST00000102602 GeneID:245828
KEGG:mmu:245828 EvolutionaryTrace:Q5NCF2 NextBio:386942 Bgee:Q5NCF2
CleanEx:MM_TRAPPC1 Genevestigator:Q5NCF2 Uniprot:Q5NCF2
Length = 145
Score = 96 (38.9 bits), Expect = 0.00025, P = 0.00025
Identities = 29/97 (29%), Positives = 49/97 (50%)
Query: 48 KKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFILVTTDLDVRDADVRNFFRRFHAA-Y 106
K S + + FL + T YK++ Y T T +K +++ TDL V +R+ ++A Y
Sbjct: 51 KMSPLDMKDGFLS--FQTSRYKLHYYETPTGIK-VVMNTDLGV--GPIRDVLHHIYSALY 105
Query: 107 ID-AVSNPFHVPGKKITSRTFAERVSTIVKSFGLSSA 142
++ V NP G+ + S F R+ + V+S SA
Sbjct: 106 VEFVVKNPLCPLGQTVQSELFRSRLDSYVRSLPFFSA 142
>RGD|1311365 [details] [associations]
symbol:Trappc1 "trafficking protein particle complex 1"
species:10116 "Rattus norvegicus" [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005801 "cis-Golgi network"
evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IEA] [GO:0030008 "TRAPP complex" evidence=IEA;ISO]
InterPro:IPR007233 InterPro:IPR011012 Pfam:PF04099 RGD:1311365
GO:GO:0005783 GO:GO:0006888 SUPFAM:SSF64356 GO:GO:0030008
eggNOG:NOG237222 HOGENOM:HOG000172118 PANTHER:PTHR23249
GeneTree:ENSGT00510000047863 CTD:58485 HOVERGEN:HBG056032
OMA:FLYYKTN EMBL:AY903234 EMBL:AY903235 EMBL:AY903236 EMBL:AY903237
EMBL:AY903238 IPI:IPI00369581 RefSeq:NP_001034467.1 UniGene:Rn.2918
ProteinModelPortal:Q2KMM2 SMR:Q2KMM2 STRING:Q2KMM2 PRIDE:Q2KMM2
Ensembl:ENSRNOT00000057079 GeneID:287427 KEGG:rno:287427
UCSC:RGD:1311365 InParanoid:Q2KMM2 NextBio:626109
ArrayExpress:Q2KMM2 Genevestigator:Q2KMM2 Uniprot:Q2KMM2
Length = 145
Score = 96 (38.9 bits), Expect = 0.00025, P = 0.00025
Identities = 29/97 (29%), Positives = 49/97 (50%)
Query: 48 KKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFILVTTDLDVRDADVRNFFRRFHAA-Y 106
K S + + FL + T YK++ Y T T +K +++ TDL V +R+ ++A Y
Sbjct: 51 KMSPLDMKDGFLS--FQTSRYKLHYYETPTGIK-VVMNTDLGV--GPIRDVLHHIYSALY 105
Query: 107 ID-AVSNPFHVPGKKITSRTFAERVSTIVKSFGLSSA 142
++ V NP G+ + S F R+ + V+S SA
Sbjct: 106 VEFVVKNPLCPLGQTVQSELFRSRLDSYVRSLPFFSA 142
>UNIPROTKB|Q2KMM2 [details] [associations]
symbol:Trappc1 "Trafficking protein particle complex
subunit 1" species:10116 "Rattus norvegicus" [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=IEA] InterPro:IPR007233
InterPro:IPR011012 Pfam:PF04099 RGD:1311365 GO:GO:0005783
GO:GO:0006888 SUPFAM:SSF64356 GO:GO:0030008 eggNOG:NOG237222
HOGENOM:HOG000172118 PANTHER:PTHR23249 GeneTree:ENSGT00510000047863
CTD:58485 HOVERGEN:HBG056032 OMA:FLYYKTN EMBL:AY903234
EMBL:AY903235 EMBL:AY903236 EMBL:AY903237 EMBL:AY903238
IPI:IPI00369581 RefSeq:NP_001034467.1 UniGene:Rn.2918
ProteinModelPortal:Q2KMM2 SMR:Q2KMM2 STRING:Q2KMM2 PRIDE:Q2KMM2
Ensembl:ENSRNOT00000057079 GeneID:287427 KEGG:rno:287427
UCSC:RGD:1311365 InParanoid:Q2KMM2 NextBio:626109
ArrayExpress:Q2KMM2 Genevestigator:Q2KMM2 Uniprot:Q2KMM2
Length = 145
Score = 96 (38.9 bits), Expect = 0.00025, P = 0.00025
Identities = 29/97 (29%), Positives = 49/97 (50%)
Query: 48 KKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFILVTTDLDVRDADVRNFFRRFHAA-Y 106
K S + + FL + T YK++ Y T T +K +++ TDL V +R+ ++A Y
Sbjct: 51 KMSPLDMKDGFLS--FQTSRYKLHYYETPTGIK-VVMNTDLGV--GPIRDVLHHIYSALY 105
Query: 107 ID-AVSNPFHVPGKKITSRTFAERVSTIVKSFGLSSA 142
++ V NP G+ + S F R+ + V+S SA
Sbjct: 106 VEFVVKNPLCPLGQTVQSELFRSRLDSYVRSLPFFSA 142
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.137 0.403 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 143 143 0.00091 102 3 11 22 0.41 31
30 0.48 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 45
No. of states in DFA: 544 (58 KB)
Total size of DFA: 125 KB (2081 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 13.00u 0.14s 13.14t Elapsed: 00:00:01
Total cpu time: 13.00u 0.14s 13.14t Elapsed: 00:00:01
Start: Sat May 11 01:07:11 2013 End: Sat May 11 01:07:12 2013