BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032312
(143 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A9UY97|SERIC_MONBE Probable serine incorporator OS=Monosiga brevicollis GN=serinc PE=3
SV=1
Length = 483
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 75/154 (48%), Gaps = 24/154 (15%)
Query: 2 WAASCLASCCAACACDAC-RSAVSGISRRSARIAYCGLFALSLIVSWIL--REVAAPLME 58
+AA +A CC + AC C RS S + S RI Y LF LS I +WI+ ++V+ LM+
Sbjct: 14 YAAESVACCCGSAACSLCCRSCPSCTNSTSTRITYAILFFLSSIAAWIMLDKDVSKGLMK 73
Query: 59 KLPWINHFHKTPSR----------------EWFETDAVLRVSLGNFLFFTILSILMVGVK 102
+ +H T R W E V+R+ LF LS+ +GV
Sbjct: 74 ----VCCYHSTLFRLVLFTQPAIKTTTNVVPWGEL-GVMRIMFSVCLFHLFLSLCTIGVS 128
Query: 103 NQKDPRDSLHHGGWMMKIICWCLLVIFMFFLPNE 136
+ KDPR SLH+G W +K+I ++ FF+ N
Sbjct: 129 SSKDPRSSLHNGMWFIKLILLVGAMVGSFFISNS 162
>sp|Q5R533|SERC3_PONAB Serine incorporator 3 OS=Pongo abelii GN=SERINC3 PE=2 SV=1
Length = 473
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 11/136 (8%)
Query: 11 CAACACDACRSAVSGISRRSARIAYCGLFALSLIVSWIL-REVAAPLMEKLPWI----NH 65
C+ +C C + + R+ Y + LS +VS+I+ R+ ++K+P
Sbjct: 18 CSGASCLLCSCCPNSKNSTVTRLIYAFILLLSTVVSYIMQRKEMETYLKKIPGFCEGGFK 77
Query: 66 FHKTPSREWFETD------AVLRVSLGNFLFFTILSILMVGVKNQKDPRDSLHHGGWMMK 119
H+ + D AV R+S +FF + S+LM VK KDPR ++H+G W K
Sbjct: 78 IHEADINADKDCDVLVGYKAVYRISFAMAIFFFVFSLLMFKVKTSKDPRAAVHNGFWFFK 137
Query: 120 IICWCLLVIFMFFLPN 135
I +++ F++P
Sbjct: 138 IAALIGIMVGSFYIPG 153
>sp|Q7TNK0|SERC1_RAT Serine incorporator 1 OS=Rattus norvegicus GN=Serinc1 PE=1 SV=1
Length = 453
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 63/138 (45%), Gaps = 9/138 (6%)
Query: 4 ASCLASCCAACACDACRSAVSGISRRSARIAYCGLFALSLIVSWILREVAAPLME----K 59
AS + C + C CR SG + R+ Y + + V+ ++ P ME K
Sbjct: 11 ASWIPCLCGSAPCLLCRCCPSGNNSTVTRLIYALFLLVGVCVACVM---LIPGMEEQLNK 67
Query: 60 LPWI--NHFHKTPSREWFETDAVLRVSLGNFLFFTILSILMVGVKNQKDPRDSLHHGGWM 117
+P N P AV R+ G +F+ +LS+LM+ VK+ DPR ++H+G W
Sbjct: 68 IPGFCENEKGVVPCNILVGYKAVYRLCFGLAMFYLLLSLLMIKVKSSSDPRAAVHNGFWF 127
Query: 118 MKIICWCLLVIFMFFLPN 135
K ++I FF+P
Sbjct: 128 FKFATAVAIIIGAFFIPE 145
>sp|Q9QZI8|SERC1_MOUSE Serine incorporator 1 OS=Mus musculus GN=Serinc1 PE=1 SV=1
Length = 453
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 63/138 (45%), Gaps = 9/138 (6%)
Query: 4 ASCLASCCAACACDACRSAVSGISRRSARIAYCGLFALSLIVSWILREVAAPLME----K 59
AS + C + C CR SG + R+ Y + + V+ ++ P ME K
Sbjct: 11 ASWIPCLCGSAPCLLCRCCPSGNNSTVTRLIYALFLLVGVCVACVM---LIPGMEEQLNK 67
Query: 60 LPWI--NHFHKTPSREWFETDAVLRVSLGNFLFFTILSILMVGVKNQKDPRDSLHHGGWM 117
+P N P AV R+ G +F+ +LS+LM+ VK+ DPR ++H+G W
Sbjct: 68 IPGFCENEKGVVPCNILVGYKAVYRLCFGLAMFYLLLSLLMIKVKSSSDPRAAVHNGFWF 127
Query: 118 MKIICWCLLVIFMFFLPN 135
K ++I FF+P
Sbjct: 128 FKFATAVAIIIGAFFIPE 145
>sp|A7S4N4|SERIC_NEMVE Probable serine incorporator OS=Nematostella vectensis GN=serinc
PE=3 SV=1
Length = 456
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 64/141 (45%), Gaps = 11/141 (7%)
Query: 3 AASC---LASCCAACACD-ACRSAVSGISRRSARIAYCGLFALSLIVSWILREVAAP--- 55
AASC LA CC + AC C + + S RI Y L+VS I V AP
Sbjct: 10 AASCAANLACCCGSAACSLCCNFCPTCKNSTSTRIVYSIFLLFGLVVSCI---VLAPGIR 66
Query: 56 -LMEKLPWINHFHKTPSREWFETDAVLRVSLGNFLFFTILSILMVGVKNQKDPRDSLHHG 114
+ ++P++ AV RV G FF + +LM GV + +D R + +G
Sbjct: 67 HKLNQIPYLCEHASETCDSIVGYLAVYRVCFGLAAFFLLFCLLMYGVTSSRDVRSKIQNG 126
Query: 115 GWMMKIICWCLLVIFMFFLPN 135
W +KI+ + ++ FF+P
Sbjct: 127 FWGIKILLFLGAIVAAFFIPQ 147
>sp|Q13530|SERC3_HUMAN Serine incorporator 3 OS=Homo sapiens GN=SERINC3 PE=2 SV=2
Length = 473
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 11/136 (8%)
Query: 11 CAACACDACRSAVSGISRRSARIAYCGLFALSLIVSWIL-REVAAPLMEKLPWI----NH 65
C+ +C C + + R+ Y + LS +VS+I+ R+ ++K+P
Sbjct: 18 CSGASCLLCSCCPNSKNSTVTRLIYAFILLLSTVVSYIMQRKEMETYLKKIPGFCEGGFK 77
Query: 66 FHKTPSREWFETD------AVLRVSLGNFLFFTILSILMVGVKNQKDPRDSLHHGGWMMK 119
H+ + D AV R+S +FF + S+LM VK KD R ++H+G W K
Sbjct: 78 IHEADINADKDCDVLVGYKAVYRISFAMAIFFFVFSLLMFKVKTSKDLRAAVHNGFWFFK 137
Query: 120 IICWCLLVIFMFFLPN 135
I +++ F++P
Sbjct: 138 IAALIGIMVGSFYIPG 153
>sp|Q86VE9|SERC5_HUMAN Serine incorporator 5 OS=Homo sapiens GN=SERINC5 PE=2 SV=1
Length = 423
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 59/141 (41%), Gaps = 8/141 (5%)
Query: 4 ASCLASCCAACACDACRSAVSGISRR-SARIAYCGLFALSLIVSWIL--REVAAPLMEKL 60
A LA CC + C C I + S R Y F L +++ I+ VA + E +
Sbjct: 7 AGQLACCCGSAGCSLCCDCCPRIRQSLSTRFMYALYFILVVVLCCIMMSTTVAHKMKEHI 66
Query: 61 PWINHFHK-----TPSREWFETDAVLRVSLGNFLFFTILSILMVGVKNQKDPRDSLHHGG 115
P+ K + AV RV G FF I +L + + N K R +H+G
Sbjct: 67 PFFEDMCKGIKAGDTCEKLVGYSAVYRVCFGMACFFFIFCLLTLKINNSKSCRAHIHNGF 126
Query: 116 WMMKIICWCLLVIFMFFLPNE 136
W K++ + FF+P++
Sbjct: 127 WFFKLLLLGAMCSGAFFIPDQ 147
>sp|Q54UF8|SERIC_DICDI Probable serine incorporator OS=Dictyostelium discoideum GN=serinc
PE=3 SV=1
Length = 417
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 53/117 (45%), Gaps = 11/117 (9%)
Query: 30 SARIAYCGLFALSLIVSWILREVAAPLMEKLPWINHFH--KTPSREWFETDAVL---RVS 84
S R+ Y F L IV++IL W N+ K S+ E L R++
Sbjct: 21 STRLVYVVFFLLVSIVAYILS------YWTFSWFNNLDVLKICSKGDNECKGALVVYRLT 74
Query: 85 LGNFLFFTILSILMVGVKNQKDPRDSLHHGGWMMKIICWCLLVIFMFFLPNEIVSFY 141
G L+ +L ++M+ VK+ D R L G W +KI+ +L+ FF+PN Y
Sbjct: 75 FGLALYHILLGLVMINVKSAGDSRAKLQDGYWPLKILLLGVLIFVSFFIPNSFFRVY 131
>sp|Q3MHV9|SERC1_BOVIN Serine incorporator 1 OS=Bos taurus GN=SERINC1 PE=2 SV=1
Length = 453
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 9/119 (7%)
Query: 4 ASCLASCCAACACDACRSAVSGISRRSARIAYCGLFALSLIVSWILREVAAPLME----K 59
AS + C + C CR SG + R+ Y + + V+ ++ P ME K
Sbjct: 11 ASWIPCLCGSAPCLLCRCCPSGNNSTVTRLIYALFLLVGVCVACVM---LIPGMEEQLNK 67
Query: 60 LPWI--NHFHKTPSREWFETDAVLRVSLGNFLFFTILSILMVGVKNQKDPRDSLHHGGW 116
+P N P AV R+ G +F+ +LS+LM+ VK+ DPR ++H+G W
Sbjct: 68 IPGFCENEKGMVPCNILVGYKAVYRLCFGLAMFYLLLSLLMIKVKSSSDPRAAIHNGFW 126
>sp|Q8BHJ6|SERC5_MOUSE Serine incorporator 5 OS=Mus musculus GN=Serinc5 PE=2 SV=1
Length = 461
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 57/142 (40%), Gaps = 9/142 (6%)
Query: 4 ASCLASCCAACACDACRSAVSGISR-RSARIAYCGLFALSLIVSWILR--EVAAPLMEKL 60
A LA CC + C C + R+ R Y F L + + ++ V + + +
Sbjct: 7 AGQLACCCGSAGCSLCCGCCPKFRQSRTTRFMYLFYFILVIALCCVMMTPSVMKQVKDHI 66
Query: 61 PWINHFHKTPS------REWFETDAVLRVSLGNFLFFTILSILMVGVKNQKDPRDSLHHG 114
P+ F K AV RV G FF + +L + V N K R +H+G
Sbjct: 67 PFFEEFCKKTQAGGDACENLVGYSAVYRVCFGMACFFALFCLLTLKVNNSKSCRAYIHNG 126
Query: 115 GWMMKIICWCLLVIFMFFLPNE 136
W K++ + FF+P++
Sbjct: 127 FWFFKLLLLGAMCSGAFFIPDQ 148
>sp|Q5R419|SERC1_PONAB Serine incorporator 1 OS=Pongo abelii GN=SERINC1 PE=2 SV=1
Length = 453
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 9/119 (7%)
Query: 4 ASCLASCCAACACDACRSAVSGISRRSARIAYCGLFALSLIVSWILREVAAPLME----K 59
AS + C + C CR SG + R+ Y + + V+ ++ P ME K
Sbjct: 11 ASWIPCLCGSAPCLLCRCCPSGNNSTVTRLIYALFLLVGVCVACVM---LIPGMEEQLNK 67
Query: 60 LPWI--NHFHKTPSREWFETDAVLRVSLGNFLFFTILSILMVGVKNQKDPRDSLHHGGW 116
+P N P AV R+ G +F+ +LS+LM+ VK+ DPR ++H+G W
Sbjct: 68 IPGFCENEKGVVPCNILVGYKAVYRLCFGLAMFYLLLSLLMIKVKSSSDPRAAVHNGFW 126
>sp|Q9NRX5|SERC1_HUMAN Serine incorporator 1 OS=Homo sapiens GN=SERINC1 PE=1 SV=1
Length = 453
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 9/119 (7%)
Query: 4 ASCLASCCAACACDACRSAVSGISRRSARIAYCGLFALSLIVSWILREVAAPLME----K 59
AS + C + C CR SG + R+ Y + + V+ ++ P ME K
Sbjct: 11 ASWIPCLCGSAPCLLCRCCPSGNNSTVTRLIYALFLLVGVCVACVM---LIPGMEEQLNK 67
Query: 60 LPWI--NHFHKTPSREWFETDAVLRVSLGNFLFFTILSILMVGVKNQKDPRDSLHHGGW 116
+P N P AV R+ G +F+ +LS+LM+ VK+ DPR ++H+G W
Sbjct: 68 IPGFCENEKGVVPCNILVGYKAVYRLCFGLAMFYLLLSLLMIKVKSSSDPRAAVHNGFW 126
>sp|Q12116|TMS1_YEAST Membrane protein TMS1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=TMS1 PE=1 SV=1
Length = 473
Score = 45.8 bits (107), Expect = 8e-05, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 8/142 (5%)
Query: 2 WAASCLASCCAACACDACRSAVSGISRRSARIAYCGLFALSLIVSWILREVAAPLMEKLP 61
+ ASC CC+ ++ G S R+ Y L+ ++SW+ ++
Sbjct: 15 FVASCFGGCCSNLVTKT--ASSLGSSSLGTRLLYAVWLLLNSLISWVSYSANKSIL---- 68
Query: 62 WINHFHKTPSREWFETDAVLRVSLGNFLFFTILSILMVGVKNQKDPRDSLHHGGWMMKII 121
W F T L +LG IL++++ GVK+ D R +L + W +K I
Sbjct: 69 WPGKTCTGTGECGFFTVHRLNFALG--CLHLILALVLTGVKSTNDVRAALQNSWWSLKFI 126
Query: 122 CWCLLVIFMFFLPNEIVSFYGK 143
+ L++ F +PN+ F+ K
Sbjct: 127 LYLCLIVLSFVIPNDFYIFFSK 148
>sp|Q63175|SERC5_RAT Serine incorporator 5 OS=Rattus norvegicus GN=Serinc5 PE=2 SV=1
Length = 460
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 7/115 (6%)
Query: 29 RSARIAYCGLFALSLIVSWILRE--VAAPLMEKLPWINHFHK-----TPSREWFETDAVL 81
RS R Y F L +I ++ V + E +P+ F K AV
Sbjct: 33 RSTRFMYLFYFTLVIIPCCVMMSPSVMKQMTEHIPFFEDFCKGIKAGDTCENLVGYSAVY 92
Query: 82 RVSLGNFLFFTILSILMVGVKNQKDPRDSLHHGGWMMKIICWCLLVIFMFFLPNE 136
RV G FF + +L V N K R S+H+G W K++ + FF+P++
Sbjct: 93 RVCFGMACFFFVFCVLTFKVNNSKSCRASIHNGFWFFKLLLLGAMCSGAFFIPDQ 147
>sp|A4FUZ5|SERC3_BOVIN Serine incorporator 3 OS=Bos taurus GN=SERINC3 PE=2 SV=1
Length = 472
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 79 AVLRVSLGNFLFFTILSILMVGVKNQKDPRDSLHHGGWMMKIICWCLLVIFMFFLP 134
AV R+S +FF S+LM+ VK KDPR ++H+G W KI +++ F++P
Sbjct: 96 AVYRISFALAVFFFAFSLLMLNVKTSKDPRAAIHNGFWFFKIAAIVGVMVGSFYIP 151
>sp|Q8K0E7|SERC2_MOUSE Serine incorporator 2 OS=Mus musculus GN=Serinc2 PE=2 SV=1
Length = 450
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 60/141 (42%), Gaps = 10/141 (7%)
Query: 5 SCLASCCAACACDACRSAVSGISRRSARIAYCGLFALSLIVSWI-LREVAAPLMEKLPWI 63
SC + C + C C S + +R+ + L ++VS I L + KLPW+
Sbjct: 12 SCASCLCGSAPCILCGCCPSTRNSTVSRLLFTSFLFLGVLVSIIMLSPGVESQLYKLPWV 71
Query: 64 -NHFHKTPSREWFETD--------AVLRVSLGNFLFFTILSILMVGVKNQKDPRDSLHHG 114
+ P D AV R+ FF +LM+ V++ +DPR ++ +G
Sbjct: 72 CEDRTQQPLVLQGPLDCGSLLGFRAVYRMCFATAAFFFFFMLLMICVRSSRDPRAAIQNG 131
Query: 115 GWMMKIICWCLLVIFMFFLPN 135
W K + + + F++P+
Sbjct: 132 FWFFKFLILVGITVGAFYIPD 152
>sp|Q9HDY3|YK17_SCHPO Membrane protein PB1A10.07c OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPAPB1A10.07c PE=3 SV=1
Length = 441
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 58/121 (47%), Gaps = 6/121 (4%)
Query: 27 SRRSARIAYCGLFALSLIVSWILREVAAPLMEKLPWIN----HFHKTPSREWFETDAVLR 82
S A I+Y L+ ++ ++SW + +++ KL ++ F + + AV R
Sbjct: 39 SNVGAVISYAVLYFVNSLLSWCM--LSSWFNSKLSKLSAGYLQFDCQNDGKCYSVIAVHR 96
Query: 83 VSLGNFLFFTILSILMVGVKNQKDPRDSLHHGGWMMKIICWCLLVIFMFFLPNEIVSFYG 142
+S +F L+ ++ + + +G W KI+ W +L IF FF+P + +SF+G
Sbjct: 97 LSFTLVMFHLFLAFILSLCNTRSRVAIKIQNGLWPFKIVLWFVLGIFSFFIPTKFLSFWG 156
Query: 143 K 143
Sbjct: 157 N 157
>sp|Q96SA4|SERC2_HUMAN Serine incorporator 2 OS=Homo sapiens GN=SERINC2 PE=2 SV=3
Length = 455
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 60/141 (42%), Gaps = 10/141 (7%)
Query: 5 SCLASCCAACACDACRSAVSGISRRSARIAYCGLFALSLIVSWI-LREVAAPLMEKLPWI 63
SC + C + C C + + +R+ + L ++VS I L + KLPW+
Sbjct: 12 SCASCLCGSAPCILCSCCPASRNSTVSRLIFTFFLFLGVLVSIIMLSPGVESQLYKLPWV 71
Query: 64 -NHFHKTPSREWFETD--------AVLRVSLGNFLFFTILSILMVGVKNQKDPRDSLHHG 114
P+ D AV R+ FF ++LM+ V + +DPR ++ +G
Sbjct: 72 CEEGAGIPTVLQGHIDCGSLLGYRAVYRMCFATAAFFFFFTLLMLCVSSSRDPRAAIQNG 131
Query: 115 GWMMKIICWCLLVIFMFFLPN 135
W K + L + F++P+
Sbjct: 132 FWFFKFLILVGLTVGAFYIPD 152
>sp|Q4R6L9|SERC5_MACFA Serine incorporator 5 OS=Macaca fascicularis GN=SERINC5 PE=2 SV=1
Length = 424
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 5/90 (5%)
Query: 52 VAAPLMEKLPWINHFHK-----TPSREWFETDAVLRVSLGNFLFFTILSILMVGVKNQKD 106
VA + E +P+ K + AV RV G FF I +L + + N K
Sbjct: 21 VAHKMKEHIPFFEDMCKGIKAGDTCEKLVGYSAVYRVCFGMACFFFIFCLLTLKINNSKS 80
Query: 107 PRDSLHHGGWMMKIICWCLLVIFMFFLPNE 136
R +H+G W K++ + FF+P++
Sbjct: 81 CRAHIHNGFWFFKLLLLGAMCSGAFFIPDQ 110
>sp|Q58CW5|SERC2_BOVIN Serine incorporator 2 OS=Bos taurus GN=SERINC2 PE=2 SV=1
Length = 452
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 17/144 (11%)
Query: 4 ASCL--ASCCAACACDACRSAVSGISRRSARIAYCGLFALSLIVSWILREVAAPLMEKLP 61
ASCL ++ C C+C C S S +SR + LF L+ +L + KLP
Sbjct: 14 ASCLCGSAPCILCSCCPC-SHNSTLSRLFFTVF---LFLGVLVCVIMLSPGVESQLYKLP 69
Query: 62 WINHFHKTPSREWFETD----------AVLRVSLGNFLFFTILSILMVGVKNQKDPRDSL 111
W+ + T S + AV R+ FF + S+LMV V++ +DPR ++
Sbjct: 70 WVCN-EGTGSHVVLQGHIDCGSLLGHRAVYRMCFAMAAFFFLFSLLMVCVRSSRDPRAAI 128
Query: 112 HHGGWMMKIICWCLLVIFMFFLPN 135
+G W K + + + + F++P+
Sbjct: 129 QNGFWFFKFLIFVGITVGAFYIPD 152
>sp|Q9QZI9|SERC3_MOUSE Serine incorporator 3 OS=Mus musculus GN=Serinc3 PE=1 SV=2
Length = 472
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 62/143 (43%), Gaps = 20/143 (13%)
Query: 6 CLASCCAACACDACRSAVSGISRRSA--RIAYCGLFALSLIVSWIL-REVAAPLMEKLPW 62
C + C C+C IS+ S R+ Y + L IVS I+ E ++K+P
Sbjct: 18 CSGASCLLCSC-------CPISKNSTVTRLIYAFILFLGTIVSCIMMTEGIQTQLKKIPG 70
Query: 63 I--NHFHKTPSREWFETD--------AVLRVSLGNFLFFTILSILMVGVKNQKDPRDSLH 112
F E D AV R++ +FF +LM+ VK KDPR ++H
Sbjct: 71 FCEGGFQIKMVDTKAEKDCDVLVGFKAVYRINFAVAIFFFAFFLLMLKVKTSKDPRAAVH 130
Query: 113 HGGWMMKIICWCLLVIFMFFLPN 135
+G W KI ++I F++P
Sbjct: 131 NGFWFFKIAAIIGIMIGSFYIPG 153
>sp|Q803X0|SERC5_DANRE Serine incorporator 5 OS=Danio rerio GN=serinc5 PE=2 SV=1
Length = 460
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 58/140 (41%), Gaps = 8/140 (5%)
Query: 5 SCLASCCAACACDACRSAVSGISR-RSARIAYCGLFALSLIVSWILRE--VAAPLMEKLP 61
S LA CC + AC C I + S R Y F L + I+ V + E +P
Sbjct: 8 SQLACCCGSAACSLCCGCCPKIKQSTSTRFMYALFFMLVTVTCVIMMSPTVEMAMREHIP 67
Query: 62 WINHF-HKTPSREWFET----DAVLRVSLGNFLFFTILSILMVGVKNQKDPRDSLHHGGW 116
+ + + + E T AV +V G FF ++ + V+N R ++H+G W
Sbjct: 68 FYSQMCQQLNAGENCSTLVGYSAVYKVCFGMACFFFFFAVFTIRVQNSTGCRAAVHNGFW 127
Query: 117 MMKIICWCLLVIFMFFLPNE 136
K + FFLPN+
Sbjct: 128 FFKFVALLACCAGGFFLPNQ 147
>sp|Q2TAQ1|ELP1_XENLA Putative elongator complex protein 1 OS=Xenopus laevis GN=ikbkap
PE=2 SV=1
Length = 1170
Score = 32.7 bits (73), Expect = 0.67, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 27/110 (24%)
Query: 16 CDACRSAVSGISRRSARIAYCGLFALSLIVSWILREVAAPLME-KLPWINHFHKTPSREW 74
CDA R+A+ + F LS++ S++ R + P +E L ++ ++PS
Sbjct: 659 CDAVRAAMEKWDPQK--------FCLSILTSYVRRTI--PQLEIALQKVHELRESPSTTI 708
Query: 75 FETDAVLRV-------------SLGNFLFFTILSILMVGVKNQKDPRDSL 111
D L+ SLG + F ++ MV K+QKDP++ L
Sbjct: 709 VSADEALKYLLFLVDVNELYDHSLGTYDFDLVV---MVAEKSQKDPKEYL 755
>sp|Q5XK03|SERC4_MOUSE Serine incorporator 4 OS=Mus musculus GN=Serinc4 PE=2 SV=1
Length = 492
Score = 32.7 bits (73), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 77 TDAVLRVSLGNFLFFTILSILMVGVKNQKDPRDSLHHGGWMMKIICWCLLVIFMFFLPNE 136
+ AV RV G F + ++L+V + + +PR LH+ W +K++ L + F +P+E
Sbjct: 111 SGAVYRVCAGTATFHLLQAVLLVRLHSPTNPRAQLHNSFWSLKLLFLLGLCVVAFCIPDE 170
>sp|A6NH21|SERC4_HUMAN Serine incorporator 4 OS=Homo sapiens GN=SERINC4 PE=2 SV=1
Length = 518
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%)
Query: 77 TDAVLRVSLGNFLFFTILSILMVGVKNQKDPRDSLHHGGWMMKIICWCLLVIFMFFLPNE 136
+ AV RV G F + ++L+V + + PR LH+ W++K++ L F +P+E
Sbjct: 116 SGAVYRVCAGTATFHLLQAVLLVHLHSPTSPRAQLHNSFWLLKLLFLLGLCAIAFCIPDE 175
>sp|A8WCG0|SERC4_RAT Serine incorporator 4 OS=Rattus norvegicus GN=Serinc4 PE=2 SV=2
Length = 492
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 77 TDAVLRVSLGNFLFFTILSILMVGVKNQKDPRDSLHHGGWMMKIICWCLLVIFMFFLPNE 136
+ AV RV G F + ++L+V + + PR LH+ W +K++ L F +P+E
Sbjct: 111 SGAVYRVCAGTATFHLLQAVLLVRLHSPTSPRAQLHNSFWSLKLLFLLGLCTAAFCIPDE 170
>sp|Q5TAH2|SL9C2_HUMAN Sodium/hydrogen exchanger 11 OS=Homo sapiens GN=SLC9C2 PE=2 SV=1
Length = 1124
Score = 29.6 bits (65), Expect = 5.3, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 27/55 (49%)
Query: 86 GNFLFFTILSILMVGVKNQKDPRDSLHHGGWMMKIICWCLLVIFMFFLPNEIVSF 140
GN + F+I L VG++ D S+ G W KII L +F L N I+ F
Sbjct: 204 GNRIHFSIFRDLHVGIELSYDILGSIIFGYWCAKIIQCILADVFSNMLTNIILCF 258
>sp|O59649|FLAJ_METVO Flagella accessory protein J OS=Methanococcus voltae GN=flaJ PE=4
SV=1
Length = 558
Score = 29.3 bits (64), Expect = 7.1, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Query: 78 DAVLRVSLGNFLFFTILSILMVGVKNQKDPRDSLHHGGWM-----MKIICWCLLVIFMFF 132
D V V++ F+F I IL+ +KN K P D L H G K+ W ++ + +
Sbjct: 219 DFVTMVTVAIFIFMIIEVILIYSIKN-KLPYDRLWHTGEKPTAIDRKLRKWLIISVGLTI 277
Query: 133 LPNEIVSFYGK 143
L + IV F+GK
Sbjct: 278 LAS-IVLFWGK 287
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.332 0.140 0.488
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,789,985
Number of Sequences: 539616
Number of extensions: 1784083
Number of successful extensions: 7258
Number of sequences better than 100.0: 36
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 7218
Number of HSP's gapped (non-prelim): 41
length of query: 143
length of database: 191,569,459
effective HSP length: 106
effective length of query: 37
effective length of database: 134,370,163
effective search space: 4971696031
effective search space used: 4971696031
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.5 bits)
S2: 55 (25.8 bits)