Query 032316
Match_columns 143
No_of_seqs 89 out of 105
Neff 2.1
Searched_HMMs 29240
Date Mon Mar 25 20:23:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032316.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032316hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wsc_E PSAE, PSI-E A, photosys 100.0 3.7E-70 1.3E-74 421.9 0.7 136 4-143 1-142 (143)
2 1jb0_E Photosystem 1 reaction 100.0 3E-43 1E-47 249.3 5.1 62 82-143 1-69 (75)
3 1gxi_E Photosystem I reaction 100.0 8.8E-43 3E-47 245.9 1.9 61 82-143 2-69 (73)
4 1qp2_A Protein (PSAE protein); 100.0 2.6E-40 9E-45 231.5 4.9 62 81-143 1-62 (70)
5 3sd4_A PHD finger protein 20; 92.7 0.28 9.5E-06 31.9 5.4 44 75-123 6-49 (69)
6 2eqm_A PHD finger protein 20-l 86.0 1.9 6.5E-05 29.7 5.7 45 75-124 13-57 (88)
7 2jz2_A SSL0352 protein; SH3-li 85.5 1.4 4.9E-05 30.4 4.8 55 82-143 2-56 (66)
8 2m0o_A PHD finger protein 1; t 83.9 3.8 0.00013 29.1 6.5 43 76-123 21-63 (79)
9 2ckk_A KIN17; beta barrel, rib 79.9 1.8 6.2E-05 31.5 3.8 41 79-124 68-108 (127)
10 1eik_A RNA polymerase subunit 71.3 1.7 5.7E-05 30.2 1.5 16 79-94 48-63 (77)
11 1hmj_A RPB5, protein (subunit 70.7 2 6.9E-05 29.9 1.8 15 79-93 46-60 (78)
12 4a4f_A SurviVal of motor neuro 68.5 14 0.00048 23.3 5.4 43 76-123 3-46 (64)
13 1wxt_A Hypothetical protein FL 66.6 5.1 0.00017 24.5 2.9 21 79-99 23-43 (68)
14 2xk0_A Polycomb protein PCL; t 65.7 11 0.00038 26.0 4.7 39 78-123 12-50 (69)
15 1wxb_A Epidermal growth factor 64.9 5.6 0.00019 24.3 2.9 22 78-99 22-43 (68)
16 2jw4_A Cytoplasmic protein NCK 64.3 6.3 0.00022 24.4 3.1 23 77-99 21-43 (72)
17 2v1q_A SLA1, cytoskeleton asse 63.5 6.8 0.00023 22.9 3.0 23 77-99 16-40 (60)
18 2equ_A PHD finger protein 20-l 63.3 18 0.0006 24.2 5.3 41 79-125 7-47 (74)
19 2iim_A Proto-oncogene tyrosine 63.0 7 0.00024 23.3 3.0 22 78-99 21-42 (62)
20 2b86_A Cytoplasmic protein NCK 61.1 7.6 0.00026 24.4 3.0 22 78-99 19-40 (67)
21 1vq8_T 50S ribosomal protein L 60.6 8.8 0.0003 28.2 3.7 35 80-119 41-75 (120)
22 4ayb_H DNA-directed RNA polyme 59.1 3.8 0.00013 28.4 1.4 15 79-93 54-68 (84)
23 1uhf_A Intersectin 2; beta bar 57.8 7 0.00024 24.0 2.4 23 77-99 22-44 (69)
24 2k2m_A EPS8-like protein 1; al 57.4 9.3 0.00032 23.4 2.9 22 78-99 23-44 (68)
25 1w1f_A Tyrosine-protein kinase 57.0 11 0.00037 22.4 3.2 22 78-99 22-43 (65)
26 3bbo_W Ribosomal protein L24; 56.1 2.6 8.9E-05 33.6 0.2 27 82-110 69-95 (191)
27 2djq_A SH3 domain containing r 55.6 13 0.00044 22.5 3.3 23 77-99 21-44 (68)
28 2d8j_A FYN-related kinase; SH3 55.0 9.4 0.00032 23.5 2.7 21 79-99 23-44 (77)
29 1i07_A Epidermal growth factor 55.0 9.6 0.00033 22.5 2.6 22 78-99 16-37 (60)
30 2vkn_A Protein SSU81; membrane 54.6 8.1 0.00028 23.6 2.3 22 79-100 23-44 (70)
31 2oi3_A Tyrosine-protein kinase 54.4 11 0.00038 23.7 3.0 22 78-99 40-61 (86)
32 2k9g_A SH3 domain-containing k 54.3 11 0.00037 23.2 2.8 22 78-99 24-48 (73)
33 3p8b_B Transcription antitermi 54.2 20 0.00068 25.5 4.6 32 77-110 87-118 (152)
34 2jte_A CD2-associated protein; 54.0 11 0.00037 22.5 2.8 22 78-99 21-45 (64)
35 2cud_A SRC-like-adapter; SH3 d 53.9 11 0.00036 23.9 2.9 23 77-99 31-53 (79)
36 3j21_U 50S ribosomal protein L 53.7 13 0.00044 27.3 3.6 29 80-110 44-72 (121)
37 1j3t_A Intersectin 2; beta bar 53.7 11 0.00037 23.4 2.8 21 79-99 26-46 (74)
38 2jt4_A Cytoskeleton assembly c 52.9 11 0.00039 22.7 2.8 22 78-99 21-44 (71)
39 1ue9_A Intersectin 2; beta bar 52.8 12 0.00043 23.2 3.0 22 77-98 21-43 (80)
40 2x3w_D Syndapin I, protein kin 52.7 11 0.00036 22.2 2.5 21 78-98 18-40 (60)
41 1k1z_A VAV; SH3, proto-oncogen 52.6 11 0.00036 23.5 2.7 22 78-99 33-56 (78)
42 2zkr_t 60S ribosomal protein L 52.5 14 0.00048 28.0 3.7 39 80-125 47-86 (145)
43 2vwf_A Growth factor receptor- 52.4 13 0.00044 21.6 2.8 21 78-98 17-38 (58)
44 1nz9_A Transcription antitermi 52.1 31 0.001 21.0 4.7 29 80-110 3-31 (58)
45 1x2p_A Protein arginine N-meth 52.1 14 0.00046 22.4 3.0 22 78-99 22-44 (68)
46 1zuy_A Myosin-5 isoform; SH3 d 51.4 14 0.00048 21.4 2.9 22 77-98 15-37 (58)
47 2cre_A HEF-like protein; SH3 d 51.4 11 0.00039 22.7 2.6 22 78-99 22-47 (71)
48 2dl3_A Sorbin and SH3 domain-c 50.9 13 0.00046 22.3 2.8 21 79-99 23-44 (68)
49 1gcq_C VAV proto-oncogene; SH3 50.7 11 0.00038 22.8 2.4 21 79-99 26-48 (70)
50 1y0m_A 1-phosphatidylinositol- 50.7 14 0.00047 21.9 2.8 21 79-99 19-40 (61)
51 1zuu_A BZZ1 protein; SH3 domai 50.6 14 0.00047 21.5 2.8 23 77-99 15-39 (58)
52 1zx6_A YPR154WP; SH3 domain, p 50.1 14 0.00048 21.6 2.8 22 78-99 17-39 (58)
53 1k4u_S Phagocyte NADPH oxidase 49.8 13 0.00043 22.1 2.6 21 79-99 21-42 (62)
54 2da9_A SH3-domain kinase bindi 49.4 12 0.00042 22.7 2.6 22 78-99 22-46 (70)
55 2dil_A Proline-serine-threonin 49.3 16 0.00056 22.0 3.1 21 78-98 23-44 (69)
56 2jmc_A Spectrin alpha chain, b 49.2 12 0.00042 23.4 2.5 22 78-99 6-28 (77)
57 2xmf_A Myosin 1E SH3; motor pr 49.0 16 0.00053 21.6 2.9 21 78-98 20-41 (60)
58 1ruw_A Myosin-3 isoform, MYO3; 49.0 15 0.00053 22.2 2.9 22 77-98 17-39 (69)
59 2j6f_A CD2-associated protein; 48.9 15 0.00051 21.9 2.8 22 78-99 16-39 (62)
60 2cuc_A SH3 domain containing r 48.8 14 0.00048 22.3 2.7 23 77-99 21-44 (70)
61 2ydl_A SH3 domain-containing k 48.7 15 0.00051 22.9 2.9 22 78-99 17-41 (69)
62 4ay0_A Chaperone protein CAF1M 48.7 5.8 0.0002 30.7 1.2 20 80-99 70-98 (218)
63 1u5s_A Cytoplasmic protein NCK 48.5 15 0.0005 22.3 2.8 22 78-99 21-45 (71)
64 1x6b_A RHO guanine exchange fa 48.5 12 0.0004 23.6 2.4 22 78-99 32-53 (79)
65 2oaw_A Spectrin alpha chain, b 48.3 15 0.00053 21.6 2.8 21 78-98 16-37 (65)
66 2enm_A Sorting nexin-9; SH3-li 48.1 14 0.00049 22.8 2.7 22 78-99 25-48 (77)
67 2ct3_A Vinexin; SH3 domian, st 47.7 13 0.00044 22.4 2.4 20 79-98 23-43 (70)
68 1oot_A Hypothetical 40.4 kDa p 47.6 18 0.00061 21.2 3.0 22 78-99 18-42 (60)
69 2yun_A Nostrin; nitric oxide s 47.5 16 0.00053 22.8 2.8 21 79-99 23-44 (79)
70 2zjr_R 50S ribosomal protein L 47.1 36 0.0012 24.5 5.1 40 80-126 14-53 (115)
71 2dnu_A RUH-061, SH3 multiple d 46.9 15 0.00051 22.3 2.6 21 78-98 23-44 (71)
72 2o9s_A Ponsin; SH3 domain, sig 46.7 17 0.00059 21.8 2.9 21 78-98 21-42 (67)
73 2kxd_A 11-MER peptide, SH3 dom 46.7 15 0.00053 22.6 2.7 23 77-99 13-36 (73)
74 2ysq_A RHO guanine nucleotide 46.5 18 0.00061 22.7 3.0 21 79-99 26-47 (81)
75 2ct4_A CDC42-interacting prote 46.4 20 0.00068 21.7 3.2 18 77-94 21-38 (70)
76 3v2d_Y 50S ribosomal protein L 46.3 18 0.00061 26.1 3.3 35 80-119 5-39 (110)
77 2ecz_A Sorbin and SH3 domain-c 46.2 14 0.00048 22.3 2.4 21 78-98 22-43 (70)
78 2ega_A SH3 and PX domain-conta 46.1 17 0.00058 22.0 2.8 23 77-99 22-45 (70)
79 2dl4_A Protein STAC; SH3 domai 46.0 19 0.00065 21.8 3.0 21 79-99 23-44 (68)
80 2dl5_A KIAA0769 protein; SH3 d 46.0 15 0.00051 23.0 2.6 22 78-99 28-51 (78)
81 3u5e_Y L33, YL33, 60S ribosoma 45.9 17 0.00059 27.0 3.3 40 80-126 48-87 (127)
82 2bz8_A SH3-domain kinase bindi 45.8 19 0.00065 21.0 2.9 22 78-99 16-38 (58)
83 1wx6_A Cytoplasmic protein NCK 45.7 16 0.00054 23.4 2.7 21 79-99 33-56 (91)
84 3iz5_Y 60S ribosomal protein L 45.0 21 0.00071 27.4 3.7 29 80-110 47-75 (150)
85 2gnc_A SLIT-ROBO RHO GTPase-ac 45.0 17 0.0006 21.4 2.7 21 78-98 21-42 (60)
86 1dzf_A DNA-directed RNA polyme 44.8 7.9 0.00027 31.0 1.4 16 79-94 187-202 (215)
87 1uti_A GRB2-related adaptor pr 44.6 21 0.00073 20.7 3.0 21 78-98 16-37 (58)
88 3h0g_E DNA-directed RNA polyme 43.8 10 0.00035 30.2 1.8 15 80-94 183-197 (210)
89 1spk_A RSGI RUH-010, riken cDN 43.7 13 0.00045 22.7 2.0 22 78-99 23-46 (72)
90 1cka_A C-CRK N-terminal SH3 do 43.2 23 0.00078 20.5 2.9 22 78-99 16-38 (57)
91 2drm_A Acanthamoeba myosin IB; 43.1 22 0.00074 20.6 2.8 21 78-98 18-39 (58)
92 1x43_A Endophilin B1, SH3 doma 43.1 19 0.00066 22.5 2.8 22 78-99 32-56 (81)
93 2jxb_A T-cell surface glycopro 43.1 18 0.00061 23.2 2.6 21 79-99 47-67 (86)
94 3reb_B Tyrosine-protein kinase 43.1 19 0.00065 22.9 2.8 22 78-99 18-39 (90)
95 2ak5_A RHO guanine nucleotide 43.0 21 0.00072 21.1 2.8 22 78-99 21-43 (64)
96 1wyx_A CRK-associated substrat 42.9 19 0.00066 21.7 2.7 21 79-99 19-43 (69)
97 2do3_A Transcription elongatio 42.6 18 0.00062 24.5 2.7 29 80-110 16-44 (69)
98 3thk_A Spectrin alpha chain, b 42.5 23 0.00079 21.4 3.0 22 78-99 20-42 (73)
99 2dbm_A SH3-containing GRB2-lik 42.1 18 0.00063 22.1 2.5 22 78-99 22-44 (73)
100 2jng_A Cullin-7, CUL-7; P53 bi 41.8 33 0.0011 25.2 4.2 39 82-123 22-61 (105)
101 2a28_A BZZ1 protein; SH3 domai 41.7 26 0.00088 20.2 3.0 21 78-98 15-37 (54)
102 4a17_S RPL26, 60S ribosomal pr 41.4 27 0.00091 26.4 3.7 28 81-110 48-75 (135)
103 1wjq_A KIAA1798 protein; MBT d 41.4 40 0.0014 24.1 4.5 43 77-124 9-51 (107)
104 1uj0_A Signal transducing adap 41.2 25 0.00087 20.8 3.0 22 78-99 20-42 (62)
105 2dl7_A KIAA0769 protein; SH3 d 41.0 23 0.00079 21.7 2.8 21 79-99 24-48 (73)
106 1zlm_A Osteoclast stimulating 41.0 26 0.00088 20.4 2.9 22 78-99 18-40 (58)
107 2g6f_X RHO guanine nucleotide 40.9 25 0.00085 20.6 2.9 22 78-99 19-41 (59)
108 1tuc_A Alpha-spectrin; capping 40.6 23 0.00079 21.3 2.8 21 79-99 5-26 (63)
109 1g2b_A Spectrin alpha chain; c 40.5 24 0.00081 21.0 2.8 20 79-98 37-57 (62)
110 2nwm_A Vinexin; cell adhesion; 40.5 23 0.00079 21.7 2.8 22 78-99 16-38 (65)
111 1s1n_A Nephrocystin 1; beta ba 40.4 18 0.00061 21.8 2.2 22 77-98 24-46 (68)
112 2cub_A Cytoplasmic protein NCK 40.4 20 0.0007 23.0 2.6 21 79-99 33-54 (88)
113 2rf0_A Mitogen-activated prote 40.4 22 0.00075 23.4 2.8 16 78-93 44-59 (89)
114 1w70_A Neutrophil cytosol fact 40.0 26 0.00089 20.6 2.9 22 78-99 19-41 (60)
115 3c0c_A Endophilin-A2; endocyto 39.7 25 0.00086 21.6 2.9 22 78-99 28-50 (73)
116 1uhc_A KIAA1010 protein; beta 39.7 24 0.00083 22.0 2.8 17 78-94 28-44 (79)
117 1ujy_A RHO guanine nucleotide 39.5 19 0.00066 22.2 2.3 22 78-99 25-47 (76)
118 4f14_A Nebulette; SH3 domain, 39.5 28 0.00095 20.3 2.9 20 79-98 22-42 (64)
119 3h8z_A FragIle X mental retard 39.3 58 0.002 23.9 5.2 40 80-131 59-103 (128)
120 3ulr_B SRC substrate cortactin 39.1 29 0.00099 20.4 3.0 22 78-99 24-46 (65)
121 2kxc_A Brain-specific angiogen 39.0 16 0.00055 22.0 1.9 21 78-98 22-44 (67)
122 1csk_A C-SRC SH3 domain; phosp 38.9 26 0.00089 21.2 2.8 22 78-99 26-49 (71)
123 2ew3_A SH3-containing GRB2-lik 38.8 25 0.00086 21.7 2.8 22 78-99 18-40 (68)
124 1x69_A Cortactin isoform A; SH 38.6 25 0.00085 21.9 2.8 22 78-99 32-54 (79)
125 3dlm_A Histone-lysine N-methyl 38.4 54 0.0018 26.4 5.3 41 75-123 152-192 (213)
126 1hsq_A Phospholipase C-gamma ( 38.1 14 0.00048 22.6 1.5 23 77-99 20-43 (71)
127 4esr_A Jouberin; AHI-1, AHI1, 37.9 27 0.00093 20.9 2.8 22 78-99 21-43 (69)
128 1jo8_A ABP1P, actin binding pr 37.8 32 0.0011 20.0 3.0 21 78-98 15-36 (58)
129 2fei_A CD2-associated protein; 37.8 22 0.00077 21.8 2.4 22 78-99 16-38 (65)
130 1uff_A Intersectin 2; beta bar 37.5 25 0.00084 22.8 2.7 21 79-99 21-44 (93)
131 2ekh_A SH3 and PX domain-conta 37.5 31 0.001 21.7 3.1 21 78-98 23-44 (80)
132 1b07_A Protein (proto-oncogene 37.3 32 0.0011 20.9 3.1 21 78-98 18-39 (65)
133 4e6r_A Cytoplasmic protein NCK 37.2 32 0.0011 19.7 2.9 23 78-100 16-39 (58)
134 2biv_A SCML2 protein, sex COMB 37.1 75 0.0026 25.1 5.9 43 76-123 166-208 (243)
135 2e6z_A Transcription elongatio 37.0 19 0.00065 22.7 2.0 30 79-110 5-34 (59)
136 1wi7_A SH3-domain kinase bindi 36.5 18 0.00061 21.8 1.8 22 78-99 22-44 (68)
137 1gl5_A Tyrosine-protein kinase 36.4 31 0.0011 20.7 2.9 21 78-98 17-38 (67)
138 1x2q_A Signal transducing adap 36.3 32 0.0011 21.9 3.1 21 79-99 33-54 (88)
139 2dl8_A SLIT-ROBO RHO GTPase-ac 36.2 27 0.00092 21.4 2.6 21 78-98 24-45 (72)
140 2bc3_A Streptavidin; T7 TAG, b 35.9 24 0.00081 27.2 2.7 28 94-121 18-60 (159)
141 2m0y_A Dedicator of cytokinesi 35.9 18 0.00061 22.0 1.7 22 78-99 26-47 (74)
142 3ngp_A Spectrin alpha chain, b 35.8 35 0.0012 19.8 2.9 22 78-99 21-43 (62)
143 2csi_A RIM-BP2, RIM binding pr 35.7 28 0.00097 21.6 2.7 23 77-99 28-52 (76)
144 1aww_A ATK, AMGX1, BPK, bruton 35.5 25 0.00085 21.1 2.3 23 77-99 22-45 (67)
145 1x2k_A OSTF1, osteoclast stimu 35.5 35 0.0012 20.5 3.0 22 78-99 22-44 (68)
146 1g5v_A SurviVal motor neuron p 35.0 65 0.0022 22.0 4.6 40 77-121 6-46 (88)
147 2ege_A Uncharacterized protein 34.7 26 0.0009 21.8 2.4 22 78-99 29-52 (75)
148 3u23_A CD2-associated protein; 34.6 32 0.0011 20.1 2.7 22 78-99 22-44 (65)
149 2yup_A Vinexin; sorbin and SH3 34.5 28 0.00096 22.3 2.6 22 77-98 31-53 (90)
150 2dm1_A Protein VAV-2; RHO fami 34.5 26 0.00088 21.5 2.3 17 78-94 22-38 (73)
151 1i1j_A Melanoma derived growth 34.4 30 0.001 23.8 2.8 16 78-93 37-52 (108)
152 2f01_A Streptavidin; protein/l 34.0 29 0.00099 25.4 2.8 28 94-121 6-48 (127)
153 2ebp_A SAM and SH3 domain-cont 33.9 32 0.0011 21.4 2.7 22 78-99 26-48 (73)
154 3rnj_A Brain-specific angiogen 32.5 35 0.0012 20.4 2.7 20 80-99 25-46 (67)
155 4d8k_A Tyrosine-protein kinase 32.5 34 0.0012 24.2 2.9 22 78-99 27-48 (175)
156 2eqi_A Phospholipase C, gamma 31.9 31 0.0011 20.8 2.3 21 78-98 22-43 (69)
157 2epd_A RHO GTPase-activating p 31.5 23 0.00078 22.0 1.7 20 79-98 26-46 (76)
158 2kt8_A Probable surface protei 31.3 20 0.00067 23.1 1.4 19 81-99 28-46 (76)
159 2yrv_A AT-rich interactive dom 31.3 26 0.00088 26.1 2.2 23 101-123 13-37 (117)
160 2v1r_A Peroxisomal membrane pr 31.0 39 0.0013 20.8 2.8 16 79-94 31-46 (80)
161 1sem_A SEM-5; SRC-homology 3 ( 30.9 47 0.0016 19.1 2.9 21 78-98 17-38 (58)
162 4hcz_A PHD finger protein 1; p 30.9 30 0.001 23.2 2.2 38 81-123 3-40 (58)
163 2eyx_A V-CRK sarcoma virus CT1 30.7 27 0.00092 21.2 1.9 21 79-99 24-45 (67)
164 3r8s_U 50S ribosomal protein L 30.7 40 0.0014 23.9 3.0 27 82-110 4-30 (102)
165 2j05_A RAS GTPase-activating p 30.6 44 0.0015 19.9 2.9 22 78-99 21-43 (65)
166 1tg0_A BBC1 protein, myosin ta 30.5 47 0.0016 19.9 3.0 23 77-99 21-44 (68)
167 3szh_A Avidin/streptavidin; hi 30.3 20 0.00068 26.6 1.4 16 93-108 9-24 (122)
168 2ckk_A KIN17; beta barrel, rib 30.3 95 0.0032 22.3 5.1 39 79-122 12-53 (127)
169 2l0a_A STAM-1, signal transduc 29.8 37 0.0013 21.5 2.5 22 78-99 32-54 (72)
170 2d8h_A SH3YL1 protein; SH3 dom 29.5 30 0.001 21.5 2.0 17 78-94 32-48 (80)
171 2pqh_A Spectrin alpha chain, b 29.5 44 0.0015 20.8 2.8 20 79-98 18-38 (80)
172 1ugv_A KIAA0621, olygophrenin- 29.4 28 0.00097 21.3 1.9 22 78-99 25-48 (72)
173 2rqr_A CED-12 homolog, engulfm 29.3 38 0.0013 23.3 2.7 23 77-99 73-95 (119)
174 3e4w_A Putative uncharacterize 29.2 21 0.00073 29.3 1.6 14 112-125 62-75 (320)
175 2fpe_A C-JUN-amino-terminal ki 29.1 50 0.0017 19.4 2.9 22 78-99 18-40 (62)
176 3eg3_A Proto-oncogene tyrosine 29.0 51 0.0017 19.1 2.9 20 79-98 21-42 (63)
177 3cqt_A P59-FYN, proto-oncogene 29.0 45 0.0016 21.0 2.8 21 78-98 20-41 (79)
178 2e5k_A Suppressor of T-cell re 28.8 41 0.0014 21.5 2.7 15 79-93 32-46 (94)
179 1jqq_A PEX13P, peroxisomal mem 28.5 44 0.0015 21.2 2.8 17 79-95 31-47 (92)
180 1d1n_A Initiation factor 2; be 28.4 25 0.00087 25.1 1.7 24 82-107 33-56 (99)
181 1neg_A Spectrin alpha chain, b 28.4 45 0.0015 21.6 2.8 22 78-99 32-54 (83)
182 3h6z_A Polycomb protein SFMBT; 28.3 38 0.0013 29.2 3.0 37 79-123 34-84 (447)
183 3h0h_A Proto-oncogene tyrosine 28.2 53 0.0018 19.8 2.9 21 79-99 31-52 (73)
184 2ed0_A ABL interactor 2; coile 28.2 48 0.0017 20.6 2.8 21 78-98 32-53 (78)
185 2krs_A Probable enterotoxin; a 27.9 19 0.00066 22.8 0.9 19 81-99 26-44 (74)
186 1yn8_A NBP2, NAP1-binding prot 27.5 50 0.0017 19.0 2.6 19 77-95 15-33 (59)
187 2jqo_A Hypothetical protein YO 27.5 19 0.00064 26.7 0.9 12 79-90 68-79 (108)
188 2jvv_A Transcription antitermi 27.4 86 0.003 22.6 4.4 39 78-119 124-162 (181)
189 2eqj_A Metal-response element- 27.3 1.5E+02 0.005 20.1 5.5 45 74-123 6-50 (66)
190 1u5u_A Allene oxide synthase-l 27.3 25 0.00086 29.6 1.7 13 112-124 94-106 (374)
191 1nm7_A Peroxisomal membrane pr 27.2 48 0.0016 21.0 2.7 16 79-94 24-39 (69)
192 2dmo_A Neutrophil cytosol fact 27.0 56 0.0019 19.7 2.9 20 79-98 23-43 (68)
193 3bbo_R Ribosomal protein L19; 26.9 11 0.00037 31.1 -0.5 12 44-55 72-83 (233)
194 3ew1_A Rhizavidin; high affini 26.9 22 0.00075 26.8 1.2 20 90-109 12-31 (135)
195 2uyw_A Xenavidin; beta-barrel, 26.8 27 0.00092 25.7 1.6 16 93-108 8-23 (130)
196 1ng2_A Neutrophil cytosolic fa 26.5 49 0.0017 24.0 3.0 22 77-98 25-47 (193)
197 2yt6_A Adult MALE urinary blad 26.2 58 0.002 21.2 3.0 22 77-98 41-63 (109)
198 3mea_A SAGA-associated factor 25.9 1.1E+02 0.0037 23.7 5.0 39 76-117 39-81 (180)
199 2egc_A SH3 and PX domain-conta 25.8 43 0.0015 20.7 2.3 18 78-95 24-41 (75)
200 2csq_A RIM-BP2, RIM binding pr 25.7 42 0.0014 21.9 2.3 20 79-98 41-63 (97)
201 1si8_A Catalase; N-terminal AR 25.5 27 0.00093 30.6 1.7 14 111-124 82-95 (484)
202 2dbk_A CRK-like protein; struc 25.5 51 0.0017 21.0 2.6 20 79-98 34-54 (88)
203 1wxu_A Peroxisomal biogenesis 25.3 39 0.0013 21.7 2.0 17 79-95 33-49 (93)
204 2o2o_A SH3-domain kinase-bindi 25.3 48 0.0016 21.9 2.5 21 79-99 34-55 (92)
205 1x6g_A Megakaryocyte-associate 25.1 70 0.0024 20.1 3.2 22 78-99 32-55 (81)
206 2isa_A Catalase; peroxidase, h 25.1 28 0.00096 30.5 1.7 15 111-125 81-95 (483)
207 4ag1_C Fynomer; hydrolase-de n 25.0 56 0.0019 20.8 2.7 22 78-99 21-43 (84)
208 2y32_A BLR5658 protein, bradav 24.8 29 0.00097 26.2 1.5 15 94-108 4-18 (138)
209 1gbq_A GRB2; complex (signal t 24.8 49 0.0017 20.3 2.4 16 79-94 25-40 (74)
210 2zsc_A Tamavidin2; biotin bind 24.7 25 0.00084 26.7 1.1 27 95-121 10-51 (141)
211 2r58_A Polycomb protein SCM; M 24.6 1.6E+02 0.0054 23.7 5.9 56 62-122 124-179 (265)
212 1dgf_A Catalase; heme, NADPH, 24.5 29 0.00099 30.6 1.7 14 111-124 99-112 (497)
213 3i5r_A Phosphatidylinositol 3- 24.5 40 0.0014 21.1 1.9 17 77-93 19-35 (83)
214 2j2m_A Catalase; functional cl 24.3 30 0.001 30.5 1.7 14 111-124 84-97 (491)
215 1a4e_A Catalase A; oxidoreduct 24.3 30 0.001 30.4 1.7 15 111-125 84-98 (488)
216 1qwl_A KATA catalase; beta bar 24.1 30 0.001 30.6 1.7 14 111-124 84-97 (505)
217 1iby_A Nitrosocyanin; RED copp 24.0 46 0.0016 21.6 2.2 46 76-123 36-87 (112)
218 2i0n_A Class VII unconventiona 24.0 59 0.002 20.3 2.7 16 79-94 26-41 (80)
219 2xq1_A Peroxisomal catalase; o 23.8 30 0.001 30.6 1.7 16 110-125 94-109 (509)
220 2kq8_A Cell WALL hydrolase; GF 23.7 19 0.00066 22.5 0.3 19 81-99 27-45 (70)
221 2lcs_A NAP1-binding protein 2; 23.6 61 0.0021 20.1 2.7 21 78-98 20-41 (73)
222 1nnx_A Protein YGIW; structura 23.6 20 0.00067 25.7 0.4 22 83-104 42-64 (109)
223 1m7s_A Catalase; beta barrel, 23.5 31 0.0011 30.3 1.7 15 111-125 79-93 (484)
224 1dj7_B Ferredoxin thioredoxin 23.3 35 0.0012 23.8 1.6 55 83-142 2-73 (75)
225 2bzy_A CRK-like protein, CRKL 23.2 57 0.0019 19.6 2.4 21 78-98 18-39 (67)
226 1z9q_A Neutrophil cytosol fact 22.9 39 0.0013 21.9 1.7 22 78-99 33-55 (79)
227 2dlp_A KIAA1783 protein; SH3 d 22.9 54 0.0018 20.7 2.3 20 79-98 24-46 (85)
228 2c1s_A Biotin binding protein 22.8 33 0.0011 25.3 1.5 16 94-109 8-23 (126)
229 3rdo_A Streptavidin; improved 22.8 24 0.00083 27.1 0.7 28 83-110 16-47 (153)
230 4glm_A Dynamin-binding protein 22.5 77 0.0027 18.8 2.9 23 77-99 27-50 (72)
231 1a62_A RHO; transcription term 22.5 1E+02 0.0034 22.2 3.9 32 81-127 90-122 (130)
232 4dne_A Streptavidin; biotin, b 22.2 29 0.001 27.1 1.1 17 94-110 42-58 (183)
233 2kgt_A Tyrosine-protein kinase 22.2 58 0.002 19.6 2.3 20 78-98 25-45 (72)
234 2yuq_A Tyrosine-protein kinase 21.8 61 0.0021 20.4 2.4 22 77-98 33-55 (85)
235 2ed1_A 130 kDa phosphatidylino 21.7 64 0.0022 19.8 2.5 20 79-98 26-46 (76)
236 1udl_A Intersectin 2, KIAA1256 21.1 86 0.0029 20.2 3.1 24 76-99 47-71 (98)
237 2kbt_A Chimera of proto-oncoge 21.0 69 0.0024 22.7 2.8 20 79-98 21-42 (142)
238 2yuo_A CIP85, RUN and TBC1 dom 20.6 82 0.0028 19.3 2.8 20 79-98 23-43 (78)
239 1xov_A PLY protein, plypsa; al 20.5 43 0.0015 27.5 1.8 18 82-99 220-237 (326)
240 1sy7_A Catalase 1; heme oxidat 20.4 42 0.0014 30.5 1.9 15 111-125 99-113 (715)
No 1
>2wsc_E PSAE, PSI-E A, photosystem I reaction center subunit IV A, chloroplastic; photosynthesis, electron transfer, membrane proteins, large complexes; HET: CL1 PQN BCR LMU LMG SUC UNL; 3.30A {Arabidopsis thaliana} PDB: 2wse_E* 2wsf_E* 2o01_E* 3lw5_E*
Probab=100.00 E-value=3.7e-70 Score=421.95 Aligned_cols=136 Identities=62% Similarity=0.987 Sum_probs=63.0
Q ss_pred cccccccccceeccccccccCC-CCcceEEEecCCCCCCCceeeEEeeccccCCCCC-----ccccCCCcCCCCCCCCCC
Q 032316 4 CNMASAASGFSLTPNVATNVNS-GSKSNMLFFPPKNNSSNSFRLVVRASEEAAAPPA-----AATTAAPAEGEAAPKPKP 77 (143)
Q Consensus 4 ~~masaas~F~l~~~v~~~~~~-~s~~~~~f~~~k~~~~~~~rlvvra~e~~a~~~~-----~a~~~~~~~~~~~~~~kp 77 (143)
|+||||+|||+|++|+++++++ +++++|+||++++++ +||||||+|++++|++ +++++++++++ ++|+||
T Consensus 1 ~~masaas~f~l~~~v~~~~~~~~~~~~~~f~~~~~~~---~rlvvra~e~~a~~~p~~~~~~~~~~~~~~~~-~~~~kp 76 (143)
T 2wsc_E 1 MAMTTASTVFVLPANVTSVAGASSSRSSVSFLPMRNAG---SRLVVRAAEDPAPASSSSKDSPAAAAAPDGAT-ATKPKP 76 (143)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CcccccccceeecccccccccCCCCcceEEEecccCCC---ceEEEEcccCCCCCCccccccccccccccccc-cccCCC
Confidence 7999999999999999997555 789999999999988 8999999999887732 23555566665 679999
Q ss_pred CCCCCCCCCeeEEeeccceeccccceEEEEcCCCCCcccEEEEeeeeeecccccCccccccceecC
Q 032316 78 PPIGPKRGAKVKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEIEEVK 143 (143)
Q Consensus 78 p~igp~RGskVrIlR~ESYWyn~vGtVvsVDqs~girYPVvVRF~kVNY~gvsTNNfa~~El~ev~ 143 (143)
|||||+|||||||||||||||||||+|++|||++||||||+||||||||+|+|||||+||||+||+
T Consensus 77 p~igp~RGskVrIlR~ESYWyn~vGtVvsVDqs~girYPVvVRF~KVNYaGvnTNNfA~dEleev~ 142 (143)
T 2wsc_E 77 PPIGPKRGSKVKILRRESYWFKNVGSVVAVDQDPKTRYPVVVRFAKVNYANISTNNYALDEVEEVA 142 (143)
T ss_dssp --CCSCSSSCBCCCSSSSTTTTSCBBCCCCCCSSCCSCCCBCBCSCCCSSSCCCCBCCSSCCCCCC
T ss_pred CCCCCCCCCEeEEccccceeecCcceEEEEecCCCccccEEEEeeeecccccccccccHHHHhhhc
Confidence 999999999999999999999999999999999899999999999999999999999999999985
No 2
>1jb0_E Photosystem 1 reaction centre subunit IV; membrane protein, multiprotein-pigment complex, photosynthes; HET: CL1 PQN BCR LHG LMG; 2.50A {Synechococcus elongatus} SCOP: b.34.4.2 PDB: 3pcq_E*
Probab=100.00 E-value=3e-43 Score=249.25 Aligned_cols=62 Identities=63% Similarity=1.113 Sum_probs=60.1
Q ss_pred CCCCCeeEEeeccceeccccceEEEEcCCCCCcccEEEEeeeeee-------cccccCccccccceecC
Q 032316 82 PKRGAKVKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNY-------ANVSTNNYALDEIEEVK 143 (143)
Q Consensus 82 p~RGskVrIlR~ESYWyn~vGtVvsVDqs~girYPVvVRF~kVNY-------~gvsTNNfa~~El~ev~ 143 (143)
++|||||||||||||||||+|||++|||++||||||+|||||||| +|+||||||+|||++++
T Consensus 1 i~RGskVrIlR~ESYWyn~vGtVasVD~s~gi~YPV~VRFdkVNY~g~sG~~~G~nTNnfa~~El~~v~ 69 (75)
T 1jb0_E 1 VQRGSKVKILRPESYWYNEVGTVASVDQTPGVKYPVIVRFDKVNYTGYSGSASGVNTNNFALHEVQEVA 69 (75)
T ss_dssp CCTTCEEEECCTTCTTBTCEEEEEEECCCTTCSCCEEEECSSCCSCSSTTCCCCCCEEEECGGGEEECC
T ss_pred CCCCCEEEEccccceeecCcceEEEEecCCCccccEEEEEeeecccccccccccccccccCHhHhhccc
Confidence 589999999999999999999999999988999999999999999 99999999999999985
No 3
>1gxi_E Photosystem I reaction center subunit IV; photosynthesis, PSAE SUB-UNIT, thylakoid; NMR {Synechocystis SP} SCOP: b.34.4.2 PDB: 1pse_A 1psf_A
Probab=100.00 E-value=8.8e-43 Score=245.85 Aligned_cols=61 Identities=51% Similarity=0.939 Sum_probs=59.4
Q ss_pred CCCCCeeEEeeccceeccccceEEEEcCCCCCcccEEEEeeeeee-------cccccCccccccceecC
Q 032316 82 PKRGAKVKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNY-------ANVSTNNYALDEIEEVK 143 (143)
Q Consensus 82 p~RGskVrIlR~ESYWyn~vGtVvsVDqs~girYPVvVRF~kVNY-------~gvsTNNfa~~El~ev~ 143 (143)
++|||||||||||||||||+|||++|||+ ||||||+|||||||| +|+||||||+|||++++
T Consensus 2 i~RGskVrIlR~ESYWyn~vGtVasVD~s-gi~YPVvVRF~kVNY~g~sG~~~GvnTNnfa~~El~~v~ 69 (73)
T 1gxi_E 2 LNRGDKVRIKRTESYWYGDVGTVASVEKS-GILYPVIVRFDRVNYNGFSGSASGVNTNNFAENELELVQ 69 (73)
T ss_dssp CCTTCCEEECCSSSTTTTEEECBCCTTTC-CSSSCEEECCSCSCCCTTTSCSSSCSSEEECGGGEEECC
T ss_pred ccCCCEEEEccccceeecCcceEEEEcCC-CCEeeEEEEEEeeccccccccccccccccccHHHHhhhc
Confidence 78999999999999999999999999998 999999999999999 99999999999999985
No 4
>1qp2_A Protein (PSAE protein); mainly beta, roll, pleckstrin topology, SH3-like, electron T; NMR {Nostoc SP} SCOP: b.34.4.2 PDB: 1qp3_A
Probab=100.00 E-value=2.6e-40 Score=231.48 Aligned_cols=62 Identities=55% Similarity=0.989 Sum_probs=60.4
Q ss_pred CCCCCCeeEEeeccceeccccceEEEEcCCCCCcccEEEEeeeeeecccccCccccccceecC
Q 032316 81 GPKRGAKVKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEIEEVK 143 (143)
Q Consensus 81 gp~RGskVrIlR~ESYWyn~vGtVvsVDqs~girYPVvVRF~kVNY~gvsTNNfa~~El~ev~ 143 (143)
+++|||+||||||||||||++|+|++|||+ ||||||+||||||||+|++||||+||||++|+
T Consensus 1 Mi~rGs~VrIlr~eSywy~~vG~V~~Vd~~-~~~ypV~VrFekvNy~g~~TnnFal~ELe~v~ 62 (70)
T 1qp2_A 1 MVQRGSKVRILRPESYWFQDVGTVASVDQS-GIKYPVIVRFEKVNYSGINTNNFAEDELVEVE 62 (70)
T ss_dssp CCCTTCEEEECCTTSTTTTCEEEEEEECCS-SCSCSEEEECSSCCSSCCSEEEECGGGEEECC
T ss_pred CcCCCCEEEEcCccceeecceeEEEEEeCC-CcEeeEEEEecccccccccccccChhHeeEec
Confidence 589999999999999999999999999998 99999999999999999999999999999985
No 5
>3sd4_A PHD finger protein 20; tudor domain, transcription; 1.93A {Homo sapiens} PDB: 3q1j_A
Probab=92.70 E-value=0.28 Score=31.92 Aligned_cols=44 Identities=20% Similarity=0.487 Sum_probs=33.5
Q ss_pred CCCCCCCCCCCCeeEEeeccceeccccceEEEEcCCCCCcccEEEEeee
Q 032316 75 PKPPPIGPKRGAKVKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNK 123 (143)
Q Consensus 75 ~kpp~igp~RGskVrIlR~ESYWyn~vGtVvsVDqs~girYPVvVRF~k 123 (143)
+.+++.+.+.|.|+..+-+..=|| +.||+.||.. |-++ .|+|+.
T Consensus 6 ~~~~~~~F~vGmkLEa~d~~~p~~--~AtV~~v~~~-~~~~--~VhfdG 49 (69)
T 3sd4_A 6 PNRRGISFEVGAQLEARDRLKNWY--PAHIEDIDYE-EGKV--LIHFKR 49 (69)
T ss_dssp CCCTTCCCSTTCEEEEECTTSCEE--EEEEEEEETT-TTEE--EEEETT
T ss_pred CCCCCCCcCCCCEEEEEECCCCcc--ccEEEEEecc-CCEE--EEEeCC
Confidence 355788999999999987766674 8999999864 5454 777763
No 6
>2eqm_A PHD finger protein 20-like 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2jtf_A
Probab=85.98 E-value=1.9 Score=29.68 Aligned_cols=45 Identities=24% Similarity=0.530 Sum_probs=32.7
Q ss_pred CCCCCCCCCCCCeeEEeeccceeccccceEEEEcCCCCCcccEEEEeeee
Q 032316 75 PKPPPIGPKRGAKVKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKV 124 (143)
Q Consensus 75 ~kpp~igp~RGskVrIlR~ESYWyn~vGtVvsVDqs~girYPVvVRF~kV 124 (143)
+..|+.+.+.|.||..+-+..-|| +.+|..||.. |-+ ++|+|+.-
T Consensus 13 ~~~~~~~F~vGmkLEA~D~~~~~~--~a~i~~v~~~-~~~--v~VHfdGW 57 (88)
T 2eqm_A 13 PNRPGITFEIGARLEALDYLQKWY--PSRIEKIDYE-EGK--MLVHFERW 57 (88)
T ss_dssp CSCSSCCCCSSCEEEEECTTSCEE--EEEEEEEETT-TTE--EEEEESSS
T ss_pred CCCCcCcCCCCCEEEEEcCCCCee--EEEEEEEecc-CCE--EEEEECCC
Confidence 345678999999999998888897 5566666654 444 57777643
No 7
>2jz2_A SSL0352 protein; SH3-like, synechocystis SP. PCC 6803, targe PSI, protein structure initiative, northeast structural GEN consortium, NESG; NMR {Synechocystis SP} PDB: 3c4s_A
Probab=85.53 E-value=1.4 Score=30.42 Aligned_cols=55 Identities=29% Similarity=0.415 Sum_probs=45.4
Q ss_pred CCCCCeeEEeeccceeccccceEEEEcCCCCCcccEEEEeeeeeecccccCccccccceecC
Q 032316 82 PKRGAKVKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEIEEVK 143 (143)
Q Consensus 82 p~RGskVrIlR~ESYWyn~vGtVvsVDqs~girYPVvVRF~kVNY~gvsTNNfa~~El~ev~ 143 (143)
+-.|+.||+.-+.|-.|.-.|.|-.|-.. -+-|-||.=|+.-+-| |-++|||+++
T Consensus 2 ilPG~~V~V~np~~~Yy~y~G~VQRvsdg-----kaaVLFEGGnWDKLVT--f~L~eLe~~~ 56 (66)
T 2jz2_A 2 IFPGATVRVTNVDDTYYRFEGLVQRVSDG-----KAAVLFENGNWDKLVT--FRLSELEAVK 56 (66)
T ss_dssp CCTTCEEEECCTTSTTBTCEEEEEEEETT-----EEEEEEESSSCEEEEE--EESTTEEECC
T ss_pred ccCCCEEEEeCCCCcccceeEEEEEecCC-----cEEEEecCCCceeEEE--EEhhHceecc
Confidence 45799999999999999999999999765 2567799888877666 7788888753
No 8
>2m0o_A PHD finger protein 1; tudor domain, H3K36ME3 binding, peptide binding protein; HET: M3L; NMR {Homo sapiens}
Probab=83.93 E-value=3.8 Score=29.10 Aligned_cols=43 Identities=21% Similarity=0.356 Sum_probs=32.6
Q ss_pred CCCCCCCCCCCeeEEeeccceeccccceEEEEcCCCCCcccEEEEeee
Q 032316 76 KPPPIGPKRGAKVKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNK 123 (143)
Q Consensus 76 kpp~igp~RGskVrIlR~ESYWyn~vGtVvsVDqs~girYPVvVRF~k 123 (143)
+-|.+..+-|+-|-+.-..--.| .|||+.||+. +-+ .+|+|++
T Consensus 21 ~~p~~~f~eGeDVLarwsDGlfY--LGTI~kV~~~-~e~--ClV~F~D 63 (79)
T 2m0o_A 21 SGPRPRLWEGQDVLARWTDGLLY--LGTIKKVDSA-REV--CLVQFED 63 (79)
T ss_dssp CSCCCCCCTTCEEEBCCTTSCCC--EEEEEEEETT-TTE--EEEEETT
T ss_pred cCCcceeccCCEEEEEecCCCEE--eEEEEEeccC-CCE--EEEEEcC
Confidence 44568899999998865555444 6999999997 444 5889975
No 9
>2ckk_A KIN17; beta barrel, ribosomal protein, ribonucleoprotein, nuclear protein; 1.45A {Homo sapiens}
Probab=79.88 E-value=1.8 Score=31.51 Aligned_cols=41 Identities=10% Similarity=0.349 Sum_probs=34.2
Q ss_pred CCCCCCCCeeEEeeccceeccccceEEEEcCCCCCcccEEEEeeee
Q 032316 79 PIGPKRGAKVKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKV 124 (143)
Q Consensus 79 ~igp~RGskVrIlR~ESYWyn~vGtVvsVDqs~girYPVvVRF~kV 124 (143)
++-|++|++|+|++-+ +=-.+|++.++|.+ +|=++|+.+.-
T Consensus 68 TViP~~g~~V~Iv~G~--~rG~~g~L~~id~~---~~~~~V~l~~~ 108 (127)
T 2ckk_A 68 TVIPAPGKRILVLNGG--YRGNEGTLESINEK---TFSATIVIETG 108 (127)
T ss_dssp ECCCCTTCEEEECSST--TTTCEEEEEEEEGG---GTEEEEEECSS
T ss_pred EecCCCCCEEEEEecc--cCCcEEEEEEEeCC---CcEEEEEEccC
Confidence 3456789999999987 56789999999986 89999998853
No 10
>1eik_A RNA polymerase subunit RPB5; RPBH, OCSP, NESG, protein structure initiative, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus} SCOP: d.78.1.1
Probab=71.33 E-value=1.7 Score=30.19 Aligned_cols=16 Identities=56% Similarity=0.922 Sum_probs=14.3
Q ss_pred CCCCCCCCeeEEeecc
Q 032316 79 PIGPKRGAKVKILRRE 94 (143)
Q Consensus 79 ~igp~RGskVrIlR~E 94 (143)
.+|.++|+.|||.|+-
T Consensus 48 ~~G~k~GdVvkI~R~S 63 (77)
T 1eik_A 48 AIGAKRGDIVKIIRKS 63 (77)
T ss_dssp GGGCCTTCEEEEEEEE
T ss_pred HhCCCCCCEEEEEECC
Confidence 5799999999999983
No 11
>1hmj_A RPB5, protein (subunit H); RNA polymerase, archaea; NMR {Methanocaldococcus jannaschii} SCOP: d.78.1.1
Probab=70.67 E-value=2 Score=29.89 Aligned_cols=15 Identities=40% Similarity=0.844 Sum_probs=14.2
Q ss_pred CCCCCCCCeeEEeec
Q 032316 79 PIGPKRGAKVKILRR 93 (143)
Q Consensus 79 ~igp~RGskVrIlR~ 93 (143)
.+|.++|+.|||.|+
T Consensus 46 ~~G~k~GdVvkI~R~ 60 (78)
T 1hmj_A 46 EIGAKEGDVVRVIRK 60 (78)
T ss_pred HhCCCCCCEEEEEEC
Confidence 689999999999998
No 12
>4a4f_A SurviVal of motor neuron-related-splicing factor; RNA binding protein; HET: 2MR; NMR {Homo sapiens} PDB: 4a4h_A*
Probab=68.48 E-value=14 Score=23.27 Aligned_cols=43 Identities=16% Similarity=0.311 Sum_probs=32.5
Q ss_pred CCCCCCCCCCCeeEEee-ccceeccccceEEEEcCCCCCcccEEEEeee
Q 032316 76 KPPPIGPKRGAKVKILR-RESYWYNGIGSVVAVDQDPKSRYPVVVRFNK 123 (143)
Q Consensus 76 kpp~igp~RGskVrIlR-~ESYWyn~vGtVvsVDqs~girYPVvVRF~k 123 (143)
.||...++.|+++.-+= ...-||. ++|.+|+.+.+ .+.|+|..
T Consensus 3 ~~~~~~~~vGd~c~A~~s~Dg~wYr--A~I~~v~~~~~---~~~V~fvd 46 (64)
T 4a4f_A 3 TQPTHSWKVGDKCMAVWSEDGQCYE--AEIEEIDEENG---TAAITFAG 46 (64)
T ss_dssp SCCSSCCCTTCEEEEECTTTSSEEE--EEEEEEETTTT---EEEEEETT
T ss_pred CCcCCCCCCCCEEEEEECCCCCEEE--EEEEEEcCCCC---EEEEEEEe
Confidence 45667799999999885 4677997 68999997523 36888864
No 13
>1wxt_A Hypothetical protein FLJ21522; SH3 domain, EPS8-related protein 3, protein-protein interaction, structural genomics; NMR {Homo sapiens}
Probab=66.60 E-value=5.1 Score=24.52 Aligned_cols=21 Identities=19% Similarity=0.528 Sum_probs=18.7
Q ss_pred CCCCCCCCeeEEeeccceecc
Q 032316 79 PIGPKRGAKVKILRRESYWYN 99 (143)
Q Consensus 79 ~igp~RGskVrIlR~ESYWyn 99 (143)
....++|+.|.|+.++.-|+.
T Consensus 23 eLs~~~Gd~i~v~~~~~~Ww~ 43 (68)
T 1wxt_A 23 ELTVVQGEKLEVLDHSKRWWL 43 (68)
T ss_dssp BCCBCTTCEEEEEECSSSEEE
T ss_pred cCCCCCCCEEEEEEcCCCEEE
Confidence 577899999999999988885
No 14
>2xk0_A Polycomb protein PCL; transcription, aromatic CAGE; NMR {Drosophila melanogaster}
Probab=65.69 E-value=11 Score=26.04 Aligned_cols=39 Identities=23% Similarity=0.479 Sum_probs=27.0
Q ss_pred CCCCCCCCCeeEEeeccceeccccceEEEEcCCCCCcccEEEEeee
Q 032316 78 PPIGPKRGAKVKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNK 123 (143)
Q Consensus 78 p~igp~RGskVrIlR~ESYWyn~vGtVvsVDqs~girYPVvVRF~k 123 (143)
|.+..+-|+-|-+.-..--.| .||| ||++ +=-.+|||++
T Consensus 12 pa~~~~~geDVL~rw~DG~fY--LGtI--Vd~~---~~~ClV~FeD 50 (69)
T 2xk0_A 12 PAVTYALQEDVFIKCNDGRFY--LGTI--IDQT---SDQYLIRFDD 50 (69)
T ss_dssp CCCCCCTTCEEEEECTTSCEE--EEEE--EEEC---SSCEEEEETT
T ss_pred cccccccCCeEEEEecCCCEE--EEEE--EecC---CceEEEEecC
Confidence 448899999998664443333 6899 5654 3357999986
No 15
>1wxb_A Epidermal growth factor receptor pathway substrate 8-like protein; SH3, EPS8, EPS8L2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=64.90 E-value=5.6 Score=24.33 Aligned_cols=22 Identities=9% Similarity=0.389 Sum_probs=18.9
Q ss_pred CCCCCCCCCeeEEeeccceecc
Q 032316 78 PPIGPKRGAKVKILRRESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~ESYWyn 99 (143)
-.+..++|+.|.|+.++.-|+.
T Consensus 22 ~eLs~~~Gd~i~v~~~~~~Ww~ 43 (68)
T 1wxb_A 22 NELSVLKDEVLEVLEDGRQWWK 43 (68)
T ss_dssp SBCCBCTTCEEEEEECSSSEEE
T ss_pred CccCCCCCCEEEEEEcCCCEEE
Confidence 3678999999999999888874
No 16
>2jw4_A Cytoplasmic protein NCK1; SH3 domain, phosphorylation, SH2 domain, signaling protein; NMR {Homo sapiens}
Probab=64.29 E-value=6.3 Score=24.42 Aligned_cols=23 Identities=13% Similarity=0.430 Sum_probs=19.3
Q ss_pred CCCCCCCCCCeeEEeeccceecc
Q 032316 77 PPPIGPKRGAKVKILRRESYWYN 99 (143)
Q Consensus 77 pp~igp~RGskVrIlR~ESYWyn 99 (143)
+..+..++|+.|.|++++.-|+.
T Consensus 21 ~~eLs~~~Gd~i~v~~~~~~Ww~ 43 (72)
T 2jw4_A 21 EQELDIKKNERLWLLDDSKSWWR 43 (72)
T ss_dssp TTSCCCCTTCEEEEEECSSSSEE
T ss_pred CCcccCCCCCEEEEEECCCCEEE
Confidence 34688999999999999887874
No 17
>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural genomics, phosphorylation, structural protein, yeast, SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A
Probab=63.52 E-value=6.8 Score=22.93 Aligned_cols=23 Identities=30% Similarity=0.472 Sum_probs=18.1
Q ss_pred CCCCCCCCCCeeEEeec--cceecc
Q 032316 77 PPPIGPKRGAKVKILRR--ESYWYN 99 (143)
Q Consensus 77 pp~igp~RGskVrIlR~--ESYWyn 99 (143)
+..+..++|+.|.|+.+ ++-|+.
T Consensus 16 ~~eLs~~~Gd~i~v~~~~~~~~Ww~ 40 (60)
T 2v1q_A 16 QDELTIKSGDKVYILDDKKSKDWWM 40 (60)
T ss_dssp TTBCCBCTTCEEEEEESSSCSSEEE
T ss_pred CCCccCCCCCEEEEEeCCCCCCCEE
Confidence 34688999999999997 566663
No 18
>2equ_A PHD finger protein 20-like 1; tudor domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=63.29 E-value=18 Score=24.23 Aligned_cols=41 Identities=17% Similarity=0.267 Sum_probs=32.7
Q ss_pred CCCCCCCCeeEEeeccceeccccceEEEEcCCCCCcccEEEEeeeee
Q 032316 79 PIGPKRGAKVKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVN 125 (143)
Q Consensus 79 ~igp~RGskVrIlR~ESYWyn~vGtVvsVDqs~girYPVvVRF~kVN 125 (143)
+..+++|++|.-+-...=||. ++|.+|+.+ + . +.|+|+.-|
T Consensus 7 ~~~~kvGd~clA~wsDg~~Y~--A~I~~v~~~-~-~--~~V~f~Dyn 47 (74)
T 2equ_A 7 GFDFKAGEEVLARWTDCRYYP--AKIEAINKE-G-T--FTVQFYDGV 47 (74)
T ss_dssp CCCCCTTCEEEEECSSSSEEE--EEEEEESTT-S-S--EEEEETTSC
T ss_pred CCCCCCCCEEEEECCCCCEEE--EEEEEECCC-C-E--EEEEEecCC
Confidence 567899999999888778886 799999975 4 3 588997533
No 19
>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1 PDB: 1h92_A 1kik_A
Probab=62.98 E-value=7 Score=23.30 Aligned_cols=22 Identities=23% Similarity=0.708 Sum_probs=18.7
Q ss_pred CCCCCCCCCeeEEeeccceecc
Q 032316 78 PPIGPKRGAKVKILRRESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~ESYWyn 99 (143)
.....++|+.|.|+.++.-|+.
T Consensus 21 ~eLs~~~Gd~i~v~~~~~~Ww~ 42 (62)
T 2iim_A 21 GDLGFEKGEQLRILEQSGEWWK 42 (62)
T ss_dssp TBCCBCTTCEEEEEECCSSEEE
T ss_pred CCcCCCCCCEEEEEEcCCCEEE
Confidence 3678999999999999887774
No 20
>2b86_A Cytoplasmic protein NCK2; NCK SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2js2_A
Probab=61.06 E-value=7.6 Score=24.39 Aligned_cols=22 Identities=14% Similarity=0.457 Sum_probs=18.8
Q ss_pred CCCCCCCCCeeEEeeccceecc
Q 032316 78 PPIGPKRGAKVKILRRESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~ESYWyn 99 (143)
-....++|+.|.|+.+++-|+.
T Consensus 19 ~ELsf~~Gd~i~vl~~~~~Ww~ 40 (67)
T 2b86_A 19 QELDIKKNERLWLLDDSKTWWR 40 (67)
T ss_dssp TSCCBCTTCEEEEEECSSSSCE
T ss_pred CccccCCCCEEEEEecCCCeEE
Confidence 3577899999999999888875
No 21
>1vq8_T 50S ribosomal protein L24P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: b.34.5.1 PDB: 1vq4_T* 1vq5_T* 1vq6_T* 1vq7_T* 1s72_T* 1vq9_T* 1vqk_T* 1vql_T* 1vqm_T* 1vqn_T* 1vqo_T* 1vqp_T* 1yhq_T* 1yi2_T* 1yij_T* 1yit_T* 1yj9_T* 1yjn_T* 1yjw_T* 2otj_T* ...
Probab=60.65 E-value=8.8 Score=28.25 Aligned_cols=35 Identities=29% Similarity=0.423 Sum_probs=26.7
Q ss_pred CCCCCCCeeEEeeccceeccccceEEEEcCCCCCcccEEE
Q 032316 80 IGPKRGAKVKILRRESYWYNGIGSVVAVDQDPKSRYPVVV 119 (143)
Q Consensus 80 igp~RGskVrIlR~ESYWyn~vGtVvsVDqs~girYPVvV 119 (143)
..+++||.|.|++-.. -...|+|..||.. ++=|+|
T Consensus 41 ~~IkkGD~V~Vi~G~d--KGk~GkV~~V~~k---~~~V~V 75 (120)
T 1vq8_T 41 VRVNAGDTVEVLRGDF--AGEEGEVINVDLD---KAVIHV 75 (120)
T ss_dssp EECCTTCEEEECSSTT--TTCEEEEEEEETT---TTEEEE
T ss_pred ccccCCCEEEEEecCC--CCCEEEEEEEECC---CCEEEE
Confidence 4589999999999752 3578999999986 344554
No 22
>4ayb_H DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2wb1_H 2y0s_H 2waq_H 4b1o_H 4b1p_Z 2pmz_H 3hkz_H
Probab=59.06 E-value=3.8 Score=28.44 Aligned_cols=15 Identities=33% Similarity=0.702 Sum_probs=14.0
Q ss_pred CCCCCCCCeeEEeec
Q 032316 79 PIGPKRGAKVKILRR 93 (143)
Q Consensus 79 ~igp~RGskVrIlR~ 93 (143)
.+|.++|+.|||.|+
T Consensus 54 ~~g~k~GdVvkI~R~ 68 (84)
T 4ayb_H 54 SINAKPGDIIRIIRK 68 (84)
T ss_dssp HHTCCTTCEEEEEEE
T ss_pred hhCCCCCCEEEEEEc
Confidence 579999999999998
No 23
>1uhf_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=57.85 E-value=7 Score=24.02 Aligned_cols=23 Identities=13% Similarity=0.547 Sum_probs=19.1
Q ss_pred CCCCCCCCCCeeEEeeccceecc
Q 032316 77 PPPIGPKRGAKVKILRRESYWYN 99 (143)
Q Consensus 77 pp~igp~RGskVrIlR~ESYWyn 99 (143)
+-....++|+.|.|++++.-|+.
T Consensus 22 ~~eLs~~~Gd~i~v~~~~~~Ww~ 44 (69)
T 1uhf_A 22 PGDLTFTEGEEILVTQKDGEWWT 44 (69)
T ss_dssp SSBCCBCTTCEEEECEEETTEEE
T ss_pred cCccCCCCCCEEEEEEeCCCEEE
Confidence 33678999999999998887774
No 24
>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil, cytoplasm, SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2rol_A
Probab=57.45 E-value=9.3 Score=23.38 Aligned_cols=22 Identities=14% Similarity=0.448 Sum_probs=18.6
Q ss_pred CCCCCCCCCeeEEeeccceecc
Q 032316 78 PPIGPKRGAKVKILRRESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~ESYWyn 99 (143)
.....++|+.|.|+.++.-|+.
T Consensus 23 ~eLs~~~Gd~i~v~~~~~~Ww~ 44 (68)
T 2k2m_A 23 SELSVKQRDVLEVLDDSRKWWK 44 (68)
T ss_dssp SBCCBCTTCEEEEEECSSSEEE
T ss_pred CcccCCCCCEEEEEEcCCCeEE
Confidence 3678999999999999877774
No 25
>1w1f_A Tyrosine-protein kinase LYN; SH3-domain, SH3 domain, tyrosine kinase, signal transduction; NMR {Homo sapiens} PDB: 1wa7_A
Probab=57.04 E-value=11 Score=22.44 Aligned_cols=22 Identities=27% Similarity=0.661 Sum_probs=18.1
Q ss_pred CCCCCCCCCeeEEeeccceecc
Q 032316 78 PPIGPKRGAKVKILRRESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~ESYWyn 99 (143)
..+..++|+.|.|+.+..-|+.
T Consensus 22 ~eLs~~~Gd~i~v~~~~~~Ww~ 43 (65)
T 1w1f_A 22 DDLSFKKGEKMKVLEEHGEWWK 43 (65)
T ss_dssp SCCCBCTTCEEEEEEECSSEEE
T ss_pred CcCCCCCCCEEEEEEcCCCEEE
Confidence 3678999999999998776763
No 26
>3bbo_W Ribosomal protein L24; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=56.06 E-value=2.6 Score=33.60 Aligned_cols=27 Identities=22% Similarity=0.391 Sum_probs=22.9
Q ss_pred CCCCCeeEEeeccceeccccceEEEEcCC
Q 032316 82 PKRGAKVKILRRESYWYNGIGSVVAVDQD 110 (143)
Q Consensus 82 p~RGskVrIlR~ESYWyn~vGtVvsVDqs 110 (143)
+++||+|.|++-.. -...|+|..|+..
T Consensus 69 IkKGD~V~VIaGkD--KGK~GkVl~V~~k 95 (191)
T 3bbo_W 69 VKVGDTVKVISGGE--KGKIGEISKIHKH 95 (191)
T ss_dssp SCCSSCEEECSSSS--TTCCCSCCCCCSS
T ss_pred eecCCEEEEeecCC--CCceEEEEEEECC
Confidence 89999999999753 3578999999976
No 27
>2djq_A SH3 domain containing ring finger 2; MUS musculus 0 DAY neonate head cDNA, riken FULL-length enriched library, clone:4831401O22, structural genomics; NMR {Mus musculus}
Probab=55.57 E-value=13 Score=22.48 Aligned_cols=23 Identities=22% Similarity=0.628 Sum_probs=17.9
Q ss_pred CCCCCCCCCCeeEEeec-cceecc
Q 032316 77 PPPIGPKRGAKVKILRR-ESYWYN 99 (143)
Q Consensus 77 pp~igp~RGskVrIlR~-ESYWyn 99 (143)
+.....++|+.|.|+++ +.-|+.
T Consensus 21 ~~eLs~~~Gd~i~v~~~~~~~Ww~ 44 (68)
T 2djq_A 21 PGDLKFNKGDVILLRRQLDENWYQ 44 (68)
T ss_dssp TTCCCCCTTCEEEEEECCCSSEEE
T ss_pred cCCccCCCCCEEEEEEecCCCEEE
Confidence 33688999999999987 556653
No 28
>2d8j_A FYN-related kinase; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=54.98 E-value=9.4 Score=23.47 Aligned_cols=21 Identities=19% Similarity=0.510 Sum_probs=17.5
Q ss_pred CCCCCCCCeeEEeec-cceecc
Q 032316 79 PIGPKRGAKVKILRR-ESYWYN 99 (143)
Q Consensus 79 ~igp~RGskVrIlR~-ESYWyn 99 (143)
.+..++|+.|.|+++ +.-|+.
T Consensus 23 eLs~~~Gd~i~v~~~~~~~Ww~ 44 (77)
T 2d8j_A 23 DLSFRAGDKLQVLDTSHEGWWL 44 (77)
T ss_dssp BCCBCTTCCEEEEECCSSSEEE
T ss_pred ccCCCCCCEEEEEECCCCCeEE
Confidence 578999999999998 666763
No 29
>1i07_A Epidermal growth factor receptor kinase substrate EPS8; hormone/growth factor; 1.80A {Mus musculus} SCOP: b.34.2.1 PDB: 1aoj_A 1i0c_A
Probab=54.97 E-value=9.6 Score=22.51 Aligned_cols=22 Identities=14% Similarity=0.436 Sum_probs=18.5
Q ss_pred CCCCCCCCCeeEEeeccceecc
Q 032316 78 PPIGPKRGAKVKILRRESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~ESYWyn 99 (143)
.....++|+.|.|+.+++-|+.
T Consensus 16 ~eLs~~~Gd~i~v~~~~~~Ww~ 37 (60)
T 1i07_A 16 SELSVMKDDVLEILDDRRQWWK 37 (60)
T ss_dssp TBCCBCTTCEEEECGGGCCEEE
T ss_pred CcccCCCCCEEEEEEcCCCeEE
Confidence 3677899999999998887774
No 30
>2vkn_A Protein SSU81; membrane, SH3 domain, transmembrane, membrane; 2.05A {Saccharomyces cerevisiae}
Probab=54.65 E-value=8.1 Score=23.64 Aligned_cols=22 Identities=14% Similarity=0.373 Sum_probs=18.9
Q ss_pred CCCCCCCCeeEEeeccceeccc
Q 032316 79 PIGPKRGAKVKILRRESYWYNG 100 (143)
Q Consensus 79 ~igp~RGskVrIlR~ESYWyn~ 100 (143)
....++|+.|.|+.++.-|+..
T Consensus 23 eLsf~~Gd~i~v~~~~~~Ww~g 44 (70)
T 2vkn_A 23 EISFEQNEILQVSDIEGRWWKA 44 (70)
T ss_dssp BCCBCTTCEEEEECTTSSEEEE
T ss_pred cccCCCCCEEEEEEcCCCeEEE
Confidence 6789999999999998888743
No 31
>2oi3_A Tyrosine-protein kinase HCK; human HCK, SH3, SRC-type tyrosine kinase, transferase; NMR {Homo sapiens} PDB: 2oj2_A 4hck_A 5hck_A
Probab=54.43 E-value=11 Score=23.68 Aligned_cols=22 Identities=14% Similarity=0.531 Sum_probs=18.9
Q ss_pred CCCCCCCCCeeEEeeccceecc
Q 032316 78 PPIGPKRGAKVKILRRESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~ESYWyn 99 (143)
-.+..++|+.|.|+.+..-|+.
T Consensus 40 ~eLs~~~Gd~i~v~~~~~~Ww~ 61 (86)
T 2oi3_A 40 EDLSFQKGDQMVVLEESGEWWK 61 (86)
T ss_dssp SCCCCCTTCEEEEEEESSSEEE
T ss_pred CcCcCCCCCEEEEEEcCCCeEE
Confidence 3688999999999999888874
No 32
>2k9g_A SH3 domain-containing kinase-binding protein 1; CIN85, adaptor protein, downregulation, CBL, apoptosis, junction, cytoplasmic vesicle, cytoskeleton; NMR {Homo sapiens}
Probab=54.27 E-value=11 Score=23.15 Aligned_cols=22 Identities=18% Similarity=0.527 Sum_probs=18.0
Q ss_pred CCCCCCCCCeeEEeec---cceecc
Q 032316 78 PPIGPKRGAKVKILRR---ESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~---ESYWyn 99 (143)
-....++|+.|.|+.+ +.-|+.
T Consensus 24 ~eLs~~~Gd~i~v~~~~~~~~~W~~ 48 (73)
T 2k9g_A 24 DELTIKEGDIVTLINKDCIDVGWWE 48 (73)
T ss_dssp TBCCBCTTCEEEEEECCSSSTTEEE
T ss_pred CeeeECCCCEEEEEECCCCCCCEEE
Confidence 3688999999999998 566764
No 33
>3p8b_B Transcription antitermination protein NUSG; transcription elongation factor, RNA polymerase, transferase transcription complex; 1.80A {Pyrococcus furiosus} PDB: 3qqc_D
Probab=54.20 E-value=20 Score=25.49 Aligned_cols=32 Identities=22% Similarity=0.363 Sum_probs=27.0
Q ss_pred CCCCCCCCCCeeEEeeccceeccccceEEEEcCC
Q 032316 77 PPPIGPKRGAKVKILRRESYWYNGIGSVVAVDQD 110 (143)
Q Consensus 77 pp~igp~RGskVrIlR~ESYWyn~vGtVvsVDqs 110 (143)
++.+.++.|++|||.+- =+-+..|.|..||..
T Consensus 87 ~~~~~~~~Gd~VrI~~G--pf~g~~g~V~~vd~~ 118 (152)
T 3p8b_B 87 PAVSGLEPGDLVEVIAG--PFKGQKAKVVKIDES 118 (152)
T ss_dssp CTTTTCCTTCEEEECSS--TTTTCEEEEEEEETT
T ss_pred CccccCCCCCEEEEeee--cCCCCEEEEEEEeCC
Confidence 34678999999999874 477889999999986
No 34
>2jte_A CD2-associated protein; SH3 domain, coiled coil, cytoplasm, phosphorylation, SH3-binding, signaling protein; NMR {Mus musculus} PDB: 2kro_A
Probab=54.04 E-value=11 Score=22.46 Aligned_cols=22 Identities=14% Similarity=0.545 Sum_probs=17.1
Q ss_pred CCCCCCCCCeeEEeec---cceecc
Q 032316 78 PPIGPKRGAKVKILRR---ESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~---ESYWyn 99 (143)
-....++|+.|.|+.+ ++-|+.
T Consensus 21 ~eLs~~~Gd~i~v~~~~~~~~~W~~ 45 (64)
T 2jte_A 21 DELTFREGEIIHLISKETGEAGWWK 45 (64)
T ss_dssp SBCCBCTTCEEEEEESCSSSTTEEE
T ss_pred CccCCCCCCEEEEEECCCCCCCEEE
Confidence 3678999999999987 445554
No 35
>2cud_A SRC-like-adapter; SH3 domain, negative mitogenesis regulator, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=53.88 E-value=11 Score=23.93 Aligned_cols=23 Identities=26% Similarity=0.590 Sum_probs=18.8
Q ss_pred CCCCCCCCCCeeEEeeccceecc
Q 032316 77 PPPIGPKRGAKVKILRRESYWYN 99 (143)
Q Consensus 77 pp~igp~RGskVrIlR~ESYWyn 99 (143)
+.....++|++++|++.+.-|+.
T Consensus 31 ~~eLs~~~Gd~i~v~~~~~~Ww~ 53 (79)
T 2cud_A 31 ISPPIFRRGEKLRVISDEGGWWK 53 (79)
T ss_dssp TSCCSSCTTCEEEEEEEETTEEE
T ss_pred CCcCCCCCCCEEEEEecCCCeEE
Confidence 34578999999999998777774
No 36
>3j21_U 50S ribosomal protein L24P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=53.74 E-value=13 Score=27.34 Aligned_cols=29 Identities=34% Similarity=0.480 Sum_probs=23.6
Q ss_pred CCCCCCCeeEEeeccceeccccceEEEEcCC
Q 032316 80 IGPKRGAKVKILRRESYWYNGIGSVVAVDQD 110 (143)
Q Consensus 80 igp~RGskVrIlR~ESYWyn~vGtVvsVDqs 110 (143)
.-+++||.|.|++-.. -...|+|..|+..
T Consensus 44 ~~IkkGD~V~Vi~Gkd--KGk~GkV~~V~~k 72 (121)
T 3j21_U 44 LPVRVGDKVRIMRGDY--KGHEGKVVEVDLK 72 (121)
T ss_dssp EECCSSSEEEECSSSC--SSEEEEEEEEETT
T ss_pred cccccCCEEEEeecCC--CCcEeEEEEEEec
Confidence 4578999999998752 3457999999986
No 37
>1j3t_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=53.66 E-value=11 Score=23.37 Aligned_cols=21 Identities=10% Similarity=0.401 Sum_probs=18.1
Q ss_pred CCCCCCCCeeEEeeccceecc
Q 032316 79 PIGPKRGAKVKILRRESYWYN 99 (143)
Q Consensus 79 ~igp~RGskVrIlR~ESYWyn 99 (143)
....++|+.|.|++++.-|+.
T Consensus 26 eLs~~~Gd~i~v~~~~~~Ww~ 46 (74)
T 1j3t_A 26 HLNFSKHDIITVLEQQENWWF 46 (74)
T ss_dssp BCCBCTTCEEEEEEECSSEEE
T ss_pred ccCCCCCCEEEEEecCCCEEE
Confidence 578999999999998887774
No 38
>2jt4_A Cytoskeleton assembly control protein SLA1; endocytosis, SH3, actin-binding, cytoplasm, cytoskeleton, phosphorylation, SH3 domain, DNA damage, DNA repair, nucleus; NMR {Saccharomyces cerevisiae}
Probab=52.92 E-value=11 Score=22.72 Aligned_cols=22 Identities=32% Similarity=0.496 Sum_probs=17.5
Q ss_pred CCCCCCCCCeeEEeec--cceecc
Q 032316 78 PPIGPKRGAKVKILRR--ESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~--ESYWyn 99 (143)
-.+..++|+.|.|+.+ +.-|+.
T Consensus 21 ~eLs~~~Gd~i~v~~~~~~~~Ww~ 44 (71)
T 2jt4_A 21 DELTIKSGDKVYILDDKKSKDWWM 44 (71)
T ss_dssp TBCCBCTTCEEEEEESSSCSSEEE
T ss_pred CcccCCCCCEEEEEECCCCCCCEE
Confidence 3688999999999997 566653
No 39
>1ue9_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=52.84 E-value=12 Score=23.24 Aligned_cols=22 Identities=23% Similarity=0.522 Sum_probs=17.2
Q ss_pred CCCCCCCCCCeeEEeec-cceec
Q 032316 77 PPPIGPKRGAKVKILRR-ESYWY 98 (143)
Q Consensus 77 pp~igp~RGskVrIlR~-ESYWy 98 (143)
+.....++|+.|.|+.+ ++-|+
T Consensus 21 ~~eLs~~~Gd~i~v~~~~~~gWw 43 (80)
T 1ue9_A 21 SEQLSLAPGQLILILKKNTSGWW 43 (80)
T ss_dssp TTBCCCCTTCEEEEEEECSSSEE
T ss_pred CCCCCCCCCCEEEEEEecCCCcE
Confidence 33688999999999997 55555
No 40
>2x3w_D Syndapin I, protein kinase C and casein kinase substrate in N protein 1; endocytosis, N-WAsp, dynamin, pacsin I, transferase; 2.64A {Mus musculus} PDB: 2x3x_D
Probab=52.72 E-value=11 Score=22.17 Aligned_cols=21 Identities=24% Similarity=0.398 Sum_probs=16.5
Q ss_pred CCCCCCCCCeeEEeecc--ceec
Q 032316 78 PPIGPKRGAKVKILRRE--SYWY 98 (143)
Q Consensus 78 p~igp~RGskVrIlR~E--SYWy 98 (143)
.....++|+.|.|++++ +-|+
T Consensus 18 ~eLs~~~Gd~i~v~~~~~~~~W~ 40 (60)
T 2x3w_D 18 DELSFKAGDELTKLGEEDEQGWC 40 (60)
T ss_dssp SBCCBCTTCEEEECSCCCSSSEE
T ss_pred CcccCCCCCEEEEEEccCCCCce
Confidence 46889999999999874 3555
No 41
>1k1z_A VAV; SH3, proto-oncogene, signaling protein; NMR {Mus musculus} SCOP: b.34.2.1
Probab=52.56 E-value=11 Score=23.54 Aligned_cols=22 Identities=18% Similarity=0.419 Sum_probs=18.0
Q ss_pred CCCCCCCCCeeEEeec--cceecc
Q 032316 78 PPIGPKRGAKVKILRR--ESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~--ESYWyn 99 (143)
-....++|+.|.|+.+ ++-|+.
T Consensus 33 ~eLsf~~Gd~i~v~~~~~~~gWw~ 56 (78)
T 1k1z_A 33 GFLRLNPGDIVELTKAEAEHNWWE 56 (78)
T ss_dssp CCCCBCTTCEEEEEECCSSCSCEE
T ss_pred CccCCCCCCEEEEEEcCCCCCeEE
Confidence 4678999999999998 466764
No 42
>2zkr_t 60S ribosomal protein L26; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=52.46 E-value=14 Score=27.99 Aligned_cols=39 Identities=21% Similarity=0.424 Sum_probs=28.0
Q ss_pred CCCCCCCeeEEeeccceecccc-ceEEEEcCCCCCcccEEEEeeeee
Q 032316 80 IGPKRGAKVKILRRESYWYNGI-GSVVAVDQDPKSRYPVVVRFNKVN 125 (143)
Q Consensus 80 igp~RGskVrIlR~ESYWyn~v-GtVvsVDqs~girYPVvVRF~kVN 125 (143)
.-+++||.|.|++-.. -... |+|..||.. ++=|+| |.||
T Consensus 47 ~~IkkGD~V~Vi~Gkd--KGk~~GkV~~V~~k---~~~V~V--Egvn 86 (145)
T 2zkr_t 47 MPIRKDDEVQVVRGHY--KGQQIGKVVQVYRK---KYVIYI--ERVQ 86 (145)
T ss_dssp CBCCTTCEEEECSSTT--TTCCSEEEEEEETT---TTEEEE--TTCE
T ss_pred cccCCCCEEEEeecCC--CCcceeEEEEEECC---CCEEEE--eeeE
Confidence 4689999999999652 2455 999999986 344444 4444
No 43
>2vwf_A Growth factor receptor-bound protein 2; polymorphism, phosphoprotein, golgi apparatus, alternative splicing, HOST-virus interaction, SH3C, signaling; 1.58A {Homo sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A
Probab=52.39 E-value=13 Score=21.65 Aligned_cols=21 Identities=19% Similarity=0.691 Sum_probs=16.5
Q ss_pred CCCCCCCCCeeEEeec-cceec
Q 032316 78 PPIGPKRGAKVKILRR-ESYWY 98 (143)
Q Consensus 78 p~igp~RGskVrIlR~-ESYWy 98 (143)
.....++|+.|.|+++ ++-|+
T Consensus 17 ~eLs~~~Gd~i~v~~~~~~~Ww 38 (58)
T 2vwf_A 17 GELGFRRGDFIHVMDNSDPNWW 38 (58)
T ss_dssp TBCCBCTTCEEEEEECCSSSEE
T ss_pred CCcCCCCCCEEEEEEcCCCCEE
Confidence 3678999999999987 34554
No 44
>1nz9_A Transcription antitermination protein NUSG; transcription elongation, riken structural genomics/proteomics initiative, RSGI; NMR {Thermus thermophilus} SCOP: b.34.5.4
Probab=52.14 E-value=31 Score=21.00 Aligned_cols=29 Identities=14% Similarity=0.398 Sum_probs=23.8
Q ss_pred CCCCCCCeeEEeeccceeccccceEEEEcCC
Q 032316 80 IGPKRGAKVKILRRESYWYNGIGSVVAVDQD 110 (143)
Q Consensus 80 igp~RGskVrIlR~ESYWyn~vGtVvsVDqs 110 (143)
+-++.|++|||++- =|-+-.|+|..||..
T Consensus 3 ~~~~~Gd~V~V~~G--pf~g~~g~v~~v~~~ 31 (58)
T 1nz9_A 3 VAFREGDQVRVVSG--PFADFTGTVTEINPE 31 (58)
T ss_dssp CSCCTTCEEEECSG--GGTTCEEEEEEEETT
T ss_pred cccCCCCEEEEeec--CCCCcEEEEEEEcCC
Confidence 44688999999875 467778999999975
No 45
>1x2p_A Protein arginine N-methyltransferase 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=52.11 E-value=14 Score=22.38 Aligned_cols=22 Identities=32% Similarity=0.604 Sum_probs=17.1
Q ss_pred CCCCCCCCCeeEEeec-cceecc
Q 032316 78 PPIGPKRGAKVKILRR-ESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~-ESYWyn 99 (143)
-.+..++|+.|.|+++ +.-|+.
T Consensus 22 ~eLs~~~Gd~i~v~~~~~~~Ww~ 44 (68)
T 1x2p_A 22 TQLSFLRGEKILILRQTTADWWW 44 (68)
T ss_dssp TBCCCCTTCEEEEEECCSSSEEE
T ss_pred CCcCCCCCCEEEEEEcCCCCEEE
Confidence 3578899999999997 455553
No 46
>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A
Probab=51.38 E-value=14 Score=21.36 Aligned_cols=22 Identities=32% Similarity=0.542 Sum_probs=16.8
Q ss_pred CCCCCCCCCCeeEEeec-cceec
Q 032316 77 PPPIGPKRGAKVKILRR-ESYWY 98 (143)
Q Consensus 77 pp~igp~RGskVrIlR~-ESYWy 98 (143)
+.....++|+.|.|+.+ ++-|+
T Consensus 15 ~~eLs~~~Gd~i~v~~~~~~gW~ 37 (58)
T 1zuy_A 15 PSELPLKKGDVIYITREEPSGWS 37 (58)
T ss_dssp TTBCCBCTTCEEEEEEECTTSEE
T ss_pred CCcCCCCCCCEEEEEEecCCCeE
Confidence 34678999999999987 44454
No 47
>2cre_A HEF-like protein; SH3 domain, SRC homology 3 domain, beta barrel, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=51.36 E-value=11 Score=22.73 Aligned_cols=22 Identities=23% Similarity=0.525 Sum_probs=17.9
Q ss_pred CCCCCCCCCeeEEeec----cceecc
Q 032316 78 PPIGPKRGAKVKILRR----ESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~----ESYWyn 99 (143)
.....++|+.|.|+.+ ++-|+.
T Consensus 22 ~eLs~~~Gd~i~v~~~~~~~~~~Ww~ 47 (71)
T 2cre_A 22 DELAFSRGDILTILEQHVPESEGWWK 47 (71)
T ss_dssp SBCCCCSSCCEEEEESCCTTSTTEEE
T ss_pred CCCCCCCCCEEEEeEcCCCCCCCcEE
Confidence 3678899999999998 577764
No 48
>2dl3_A Sorbin and SH3 domain-containing protein 1; ponsin, C-CBL-associated protein, CAP, SH3 domain protein 5 SH3P12, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dlm_A
Probab=50.91 E-value=13 Score=22.32 Aligned_cols=21 Identities=24% Similarity=0.646 Sum_probs=16.7
Q ss_pred CCCCCCCCeeEEeec-cceecc
Q 032316 79 PIGPKRGAKVKILRR-ESYWYN 99 (143)
Q Consensus 79 ~igp~RGskVrIlR~-ESYWyn 99 (143)
.+..++|+.|.|+.+ +.-|+.
T Consensus 23 eLs~~~Gd~i~v~~~~~~~W~~ 44 (68)
T 2dl3_A 23 ELPLQKGDIVYIYKQIDQNWYE 44 (68)
T ss_dssp BCCBCTTCEEEEEECCSTTEEE
T ss_pred CccCCCCCEEEEeEecCCCEEE
Confidence 588999999999987 455653
No 49
>1gcq_C VAV proto-oncogene; SH3 domain, protein-protein complex, GRB2,VAV, signaling protein/signaling protein complex; 1.68A {Mus musculus} SCOP: b.34.2.1 PDB: 1gcp_A
Probab=50.66 E-value=11 Score=22.84 Aligned_cols=21 Identities=19% Similarity=0.465 Sum_probs=17.3
Q ss_pred CCCCCCCCeeEEeec--cceecc
Q 032316 79 PIGPKRGAKVKILRR--ESYWYN 99 (143)
Q Consensus 79 ~igp~RGskVrIlR~--ESYWyn 99 (143)
....++|+.|.|+.+ ++-|+.
T Consensus 26 eLsf~~Gd~i~v~~~~~~~~Ww~ 48 (70)
T 1gcq_C 26 FLRLNPGDIVELTKAEAEHNWWE 48 (70)
T ss_dssp BCCBCTTCEEEEEECCTTCSEEE
T ss_pred cCCcCCCCEEEEEeCCCCCCCeE
Confidence 678999999999998 456664
No 50
>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB: 1ywp_A 1ywo_A
Probab=50.65 E-value=14 Score=21.87 Aligned_cols=21 Identities=10% Similarity=0.403 Sum_probs=17.1
Q ss_pred CCCCCCCCeeEEeec-cceecc
Q 032316 79 PIGPKRGAKVKILRR-ESYWYN 99 (143)
Q Consensus 79 ~igp~RGskVrIlR~-ESYWyn 99 (143)
....++|+.|.|+++ ++-|+.
T Consensus 19 eLs~~~Gd~i~v~~~~~~~W~~ 40 (61)
T 1y0m_A 19 ELTFTKSAIIQNVEKQDGGWWR 40 (61)
T ss_dssp BCCBCTTCEEEEEECCSSSEEE
T ss_pred CcCCcCCCEEEEEEecCCCEEE
Confidence 678899999999997 566664
No 51
>1zuu_A BZZ1 protein; SH3 domain, unknown function; 0.97A {Saccharomyces cerevisiae} SCOP: b.34.2.1
Probab=50.57 E-value=14 Score=21.50 Aligned_cols=23 Identities=26% Similarity=0.479 Sum_probs=17.8
Q ss_pred CCCCCCCCCCeeEEeecc--ceecc
Q 032316 77 PPPIGPKRGAKVKILRRE--SYWYN 99 (143)
Q Consensus 77 pp~igp~RGskVrIlR~E--SYWyn 99 (143)
+.....++|+.|.|+++. +-|+.
T Consensus 15 ~~eLs~~~Gd~i~v~~~~~~~~W~~ 39 (58)
T 1zuu_A 15 DDEITITPGDKISLVARDTGSGWTK 39 (58)
T ss_dssp TTBCCBCTTCCEEEEECCSSSSEEE
T ss_pred CCcccCCCCCEEEEeEcCCCCCCEE
Confidence 346889999999999986 35653
No 52
>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces cerevisiae} PDB: 1ynz_A
Probab=50.10 E-value=14 Score=21.62 Aligned_cols=22 Identities=36% Similarity=0.789 Sum_probs=17.2
Q ss_pred CCCCCCCCCeeEEeec-cceecc
Q 032316 78 PPIGPKRGAKVKILRR-ESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~-ESYWyn 99 (143)
.....++|+.|.|+.+ ++-|+.
T Consensus 17 ~eLs~~~Gd~i~v~~~~~~~Ww~ 39 (58)
T 1zx6_A 17 GDLGLKPGDKVQLLEKLSPEWYK 39 (58)
T ss_dssp TBCCBCTTCEEEEEEECSSSEEE
T ss_pred CCccCCCCCEEEEEEecCCCEEE
Confidence 3678999999999987 555653
No 53
>1k4u_S Phagocyte NADPH oxidase subunit P67PHOX; SH3-peptide complex, helix-turn-helix, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=49.83 E-value=13 Score=22.11 Aligned_cols=21 Identities=14% Similarity=0.441 Sum_probs=16.9
Q ss_pred CCCCCCCCeeEEeec-cceecc
Q 032316 79 PIGPKRGAKVKILRR-ESYWYN 99 (143)
Q Consensus 79 ~igp~RGskVrIlR~-ESYWyn 99 (143)
....++|+.|.|+.+ ++-|+.
T Consensus 21 eLs~~~Gd~i~v~~~~~~~Ww~ 42 (62)
T 1k4u_S 21 DLEFQEGDIILVLSKVNEEWLE 42 (62)
T ss_dssp BCCBCSSCEEEEEEESSSSCEE
T ss_pred CccCCCCCEEEEEEeCCCCEEE
Confidence 578899999999997 555653
No 54
>2da9_A SH3-domain kinase binding protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=49.44 E-value=12 Score=22.67 Aligned_cols=22 Identities=18% Similarity=0.527 Sum_probs=17.5
Q ss_pred CCCCCCCCCeeEEeec---cceecc
Q 032316 78 PPIGPKRGAKVKILRR---ESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~---ESYWyn 99 (143)
-....++|+.|.|+++ +.-|+.
T Consensus 22 ~eLs~~~Gd~i~v~~~~~~~~~W~~ 46 (70)
T 2da9_A 22 DELTIKEGDIVTLINKDCIDVGWWE 46 (70)
T ss_dssp TBCCCCTTEEEEEEECCCSSTTEEE
T ss_pred CEeeEcCCCEEEEEECCCCCCCeEE
Confidence 3678999999999997 566664
No 55
>2dil_A Proline-serine-threonine phosphatase-interacting protein 1; SH3 domain, PEST phosphatase-interacting protein 1, CD2- binding protein 1; NMR {Homo sapiens}
Probab=49.29 E-value=16 Score=22.04 Aligned_cols=21 Identities=14% Similarity=0.455 Sum_probs=16.9
Q ss_pred CCCCCCCCCeeEEeec-cceec
Q 032316 78 PPIGPKRGAKVKILRR-ESYWY 98 (143)
Q Consensus 78 p~igp~RGskVrIlR~-ESYWy 98 (143)
-.+..++|+.|.|+.+ +.-|+
T Consensus 23 ~eLs~~~Gd~i~v~~~~~~~Ww 44 (69)
T 2dil_A 23 DELDLSAGDILEVILEGEDGWW 44 (69)
T ss_dssp SSCCBCTTCEEEEEECCSSSEE
T ss_pred CccCCCCCCEEEEEECCCCCEE
Confidence 3688999999999987 45555
No 56
>2jmc_A Spectrin alpha chain, brain and P41 peptide chimera; SPC-SH3, signaling protein; NMR {Gallus gallus}
Probab=49.15 E-value=12 Score=23.45 Aligned_cols=22 Identities=18% Similarity=0.522 Sum_probs=17.2
Q ss_pred CCCCCCCCCeeEEeec-cceecc
Q 032316 78 PPIGPKRGAKVKILRR-ESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~-ESYWyn 99 (143)
-....++|++|.|+++ ++-|+.
T Consensus 6 ~eLs~~~Gd~i~v~~~~~~~Ww~ 28 (77)
T 2jmc_A 6 REVTMKKGDILTLLNSTNKDWWK 28 (77)
T ss_dssp CCCCCCTTCEEECCCCCCSSCCC
T ss_pred CccCCCCCCEEEEEEecCCCEEE
Confidence 3677899999999997 455653
No 57
>2xmf_A Myosin 1E SH3; motor protein, SH3 domain; HET: DIA; 1.50A {Mus musculus}
Probab=48.98 E-value=16 Score=21.57 Aligned_cols=21 Identities=14% Similarity=0.412 Sum_probs=16.7
Q ss_pred CCCCCCCCCeeEEeec-cceec
Q 032316 78 PPIGPKRGAKVKILRR-ESYWY 98 (143)
Q Consensus 78 p~igp~RGskVrIlR~-ESYWy 98 (143)
.....++|+.|.|+.+ ++-|+
T Consensus 20 ~eLs~~~Gd~i~v~~~~~~~Ww 41 (60)
T 2xmf_A 20 DELSFNANDIIDIIKEDPSGWW 41 (60)
T ss_dssp TBCCBCTTCEEEEEEECTTSEE
T ss_pred CCcCCCCCCEEEEEEecCCCEE
Confidence 3678999999999997 45565
No 58
>1ruw_A Myosin-3 isoform, MYO3; SH3 domain, yeast, high-throughput, structural genomics, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2btt_A 1va7_A
Probab=48.97 E-value=15 Score=22.17 Aligned_cols=22 Identities=32% Similarity=0.391 Sum_probs=16.8
Q ss_pred CCCCCCCCCCeeEEeec-cceec
Q 032316 77 PPPIGPKRGAKVKILRR-ESYWY 98 (143)
Q Consensus 77 pp~igp~RGskVrIlR~-ESYWy 98 (143)
+-.+..++|+.|.|+.+ ++-|+
T Consensus 17 ~~eLs~~~Gd~i~v~~~~~~~W~ 39 (69)
T 1ruw_A 17 SSELPLKKGDIVFISRDEPSGWS 39 (69)
T ss_dssp TTBCCBCTTCEEEEEEECTTSEE
T ss_pred CCcccCCCCCEEEEEEecCCCeE
Confidence 33678999999999987 45454
No 59
>2j6f_A CD2-associated protein; metal-binding, immune response, SH3, SH2 domain, SH3 zinc-finger, SH3- binding, UBL conjugation pathway; 1.7A {Homo sapiens} PDB: 2j6k_A 2j6o_A 2j7i_A 2krm_A
Probab=48.86 E-value=15 Score=21.89 Aligned_cols=22 Identities=14% Similarity=0.428 Sum_probs=17.7
Q ss_pred CCCCCCCCCeeEEeec--cceecc
Q 032316 78 PPIGPKRGAKVKILRR--ESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~--ESYWyn 99 (143)
-....++|+.|.|+++ ++-|+.
T Consensus 16 ~eLs~~~Gd~i~v~~~~~~~~Ww~ 39 (62)
T 2j6f_A 16 DELTIRVGEIIRNVKKLQEEGWLE 39 (62)
T ss_dssp TBCCBCTTCEEEEEEECSSTTEEE
T ss_pred CCcCCcCCCEEEEEEecCCCCEEE
Confidence 3678999999999997 666664
No 60
>2cuc_A SH3 domain containing ring finger 2; structural genomics, ring finger 2 containing protein, NPPSFA; NMR {Mus musculus}
Probab=48.81 E-value=14 Score=22.25 Aligned_cols=23 Identities=17% Similarity=0.648 Sum_probs=17.4
Q ss_pred CCCCCCCCCCeeEEeec-cceecc
Q 032316 77 PPPIGPKRGAKVKILRR-ESYWYN 99 (143)
Q Consensus 77 pp~igp~RGskVrIlR~-ESYWyn 99 (143)
+..+..++|+.|.|+.+ +.-|+.
T Consensus 21 ~~eLs~~~Gd~i~v~~~~~~~Ww~ 44 (70)
T 2cuc_A 21 PEELDLQKGEGIRVLGKYQDGWLK 44 (70)
T ss_dssp TTBCCBCTTCEEEEEEEEETTEEE
T ss_pred CCcCCCCCCCEEEEEEecCCCeEE
Confidence 34678999999999997 345553
No 61
>2ydl_A SH3 domain-containing kinase-binding protein 1; signaling protein; 2.05A {Homo sapiens} PDB: 2k6d_A
Probab=48.73 E-value=15 Score=22.88 Aligned_cols=22 Identities=18% Similarity=0.527 Sum_probs=17.6
Q ss_pred CCCCCCCCCeeEEeec---cceecc
Q 032316 78 PPIGPKRGAKVKILRR---ESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~---ESYWyn 99 (143)
-....++|+.|.|+++ ++=|+.
T Consensus 17 ~eLs~~~Gd~i~vl~~~~~~~gWw~ 41 (69)
T 2ydl_A 17 DELTIKEGDIVTLINKDCIDVGWWE 41 (69)
T ss_dssp TBCCBCTTCEEEEEESCCSSTTEEE
T ss_pred CccccCCCCEEEEEEcCCCCCCEEE
Confidence 3678999999999998 566664
No 62
>4ay0_A Chaperone protein CAF1M; amino acid motifs, bacterial capsules, bacterial proteins, gene expression regulation, molecular chaperones, binding; 1.52A {Yersinia pestis} PDB: 1p5v_A 1p5u_A 1z9s_A 2os7_A 3dos_A 3dpb_A 3dsn_A 4b0m_M 4az8_A 4ayf_A
Probab=48.73 E-value=5.8 Score=30.69 Aligned_cols=20 Identities=25% Similarity=0.572 Sum_probs=16.5
Q ss_pred CCCCCCCeeEEee--------ccc-eecc
Q 032316 80 IGPKRGAKVKILR--------RES-YWYN 99 (143)
Q Consensus 80 igp~RGskVrIlR--------~ES-YWyn 99 (143)
+.|..+..|||++ +|| ||+|
T Consensus 70 l~p~~~q~lRI~~~~~~LP~DRESlf~ln 98 (218)
T 4ay0_A 70 LDAKQQNSLRIAQAGGVFPRDKESLKWLC 98 (218)
T ss_dssp ECTTCEEEEEEEECSCCCCSSSCEEEEEE
T ss_pred eCCCCceEEEEEecCCCCCcCcEEEEEEE
Confidence 5788899999987 377 9987
No 63
>1u5s_A Cytoplasmic protein NCK2; protein-protein complex, beta barrel, beta sheet, zinc finger, metal binding protein; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2fry_A
Probab=48.55 E-value=15 Score=22.31 Aligned_cols=22 Identities=9% Similarity=0.611 Sum_probs=17.7
Q ss_pred CCCCCCCCCeeEEeec---cceecc
Q 032316 78 PPIGPKRGAKVKILRR---ESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~---ESYWyn 99 (143)
.....++|+.|.|+.+ ++-|+.
T Consensus 21 ~eLs~~~Gd~i~v~~~~~~~~~Ww~ 45 (71)
T 1u5s_A 21 EELNFEKGETMEVIEKPENDPEWWK 45 (71)
T ss_dssp SBCCCCSSCCEEEEECCCTTTCEEE
T ss_pred CcccCCCCCEEEEEECCCCCCCCEE
Confidence 3678999999999998 566664
No 64
>1x6b_A RHO guanine exchange factor (GEF) 16; SH3 domain, neuroblastoma, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=48.48 E-value=12 Score=23.58 Aligned_cols=22 Identities=18% Similarity=0.369 Sum_probs=18.5
Q ss_pred CCCCCCCCCeeEEeeccceecc
Q 032316 78 PPIGPKRGAKVKILRRESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~ESYWyn 99 (143)
.....++|+.|.|++++.-|+.
T Consensus 32 ~eLs~~~Gd~i~v~~~~~gW~~ 53 (79)
T 1x6b_A 32 DEVTLQQADVVLVLQQEDGWLY 53 (79)
T ss_dssp SBCCCCTTEEEEEEEEETTEEE
T ss_pred CCcCCCCCCEEEEEEeCCCEEE
Confidence 4678999999999998877764
No 65
>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A
Probab=48.29 E-value=15 Score=21.58 Aligned_cols=21 Identities=19% Similarity=0.534 Sum_probs=16.9
Q ss_pred CCCCCCCCCeeEEeec-cceec
Q 032316 78 PPIGPKRGAKVKILRR-ESYWY 98 (143)
Q Consensus 78 p~igp~RGskVrIlR~-ESYWy 98 (143)
..+..++|+.|.|+.+ ++-|+
T Consensus 16 ~eLs~~~Gd~i~v~~~~~~~Ww 37 (65)
T 2oaw_A 16 REVTMKKGDILTLLNSTNKDWW 37 (65)
T ss_dssp TBCCBCTTCEEEEEECCSSSEE
T ss_pred CCCCCCCCCEEEEEEcCCCCEE
Confidence 3678999999999997 45565
No 66
>2enm_A Sorting nexin-9; SH3-like barrel, protein transport, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=48.08 E-value=14 Score=22.79 Aligned_cols=22 Identities=9% Similarity=0.309 Sum_probs=17.7
Q ss_pred CCCCCCCCCeeEEeecc--ceecc
Q 032316 78 PPIGPKRGAKVKILRRE--SYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~E--SYWyn 99 (143)
.....++|+.|.|++++ +-|+.
T Consensus 25 ~eLs~~~Gd~i~v~~~~~~~gW~~ 48 (77)
T 2enm_A 25 NELTVTEGEIITVTNPNVGGGWLE 48 (77)
T ss_dssp SBCCCCTTCEEEEEESCCSSSEEE
T ss_pred CeecCCCCCEEEEeEccCCCCeEE
Confidence 36789999999999974 77764
No 67
>2ct3_A Vinexin; SH3 domian, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=47.71 E-value=13 Score=22.42 Aligned_cols=20 Identities=15% Similarity=0.710 Sum_probs=16.2
Q ss_pred CCCCCCCCeeEEeec-cceec
Q 032316 79 PIGPKRGAKVKILRR-ESYWY 98 (143)
Q Consensus 79 ~igp~RGskVrIlR~-ESYWy 98 (143)
.+..++|+.|.|+.+ +.-|+
T Consensus 23 eLs~~~Gd~i~v~~~~~~gW~ 43 (70)
T 2ct3_A 23 ELELREGDRVDVMQQCDDGWF 43 (70)
T ss_dssp BCCBCTTEEEEEEEECSSSCE
T ss_pred CccCCCCCEEEEEEECCCCEE
Confidence 678999999999987 55555
No 68
>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3 domain, sturctural genomics, structural genomics; 1.39A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A 2a08_A
Probab=47.61 E-value=18 Score=21.22 Aligned_cols=22 Identities=18% Similarity=0.611 Sum_probs=16.9
Q ss_pred CCCCCCCCCeeEEeec---cceecc
Q 032316 78 PPIGPKRGAKVKILRR---ESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~---ESYWyn 99 (143)
.....++|+.|.|+.+ ++-|+.
T Consensus 18 ~eLs~~~Gd~i~v~~~~~~~~~Ww~ 42 (60)
T 1oot_A 18 GDLPFRKGDVITILKKSDSQNDWWT 42 (60)
T ss_dssp TBCCBCTTCEEEEEECCSCTTSEEE
T ss_pred CEeeEcCCCEEEEEEeCCCCCCeEE
Confidence 4678999999999987 355553
No 69
>2yun_A Nostrin; nitric oxide synthase trafficker, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=47.54 E-value=16 Score=22.81 Aligned_cols=21 Identities=24% Similarity=0.477 Sum_probs=16.7
Q ss_pred CCCCCCCCeeEEeec-cceecc
Q 032316 79 PIGPKRGAKVKILRR-ESYWYN 99 (143)
Q Consensus 79 ~igp~RGskVrIlR~-ESYWyn 99 (143)
.+..++|++|.|+.+ +.-|+.
T Consensus 23 eLs~~~Gd~i~v~~~~~~~Ww~ 44 (79)
T 2yun_A 23 ELNLEKGDIVIIHEKKEEGWWF 44 (79)
T ss_dssp BCCBCTTCEEEEEECCSSSCEE
T ss_pred CcCCCCCCEEEEEEcCCCCEEE
Confidence 578999999999987 455653
No 70
>2zjr_R 50S ribosomal protein L24; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: b.34.5.1 PDB: 1nwx_S* 1nwy_S* 1sm1_S* 1xbp_S* 2d3o_S 2zjp_R* 2zjq_R 1nkw_S 3cf5_R* 3dll_R* 3pio_R* 3pip_R* 1pnu_S 1pny_S 1vor_V 1vou_V 1vow_V 1voy_V 1vp0_V
Probab=47.10 E-value=36 Score=24.53 Aligned_cols=40 Identities=28% Similarity=0.290 Sum_probs=29.3
Q ss_pred CCCCCCCeeEEeeccceeccccceEEEEcCCCCCcccEEEEeeeeee
Q 032316 80 IGPKRGAKVKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNY 126 (143)
Q Consensus 80 igp~RGskVrIlR~ESYWyn~vGtVvsVDqs~girYPVvVRF~kVNY 126 (143)
.-+++||.|.|++-.. -...|+|..||.. +.=|+| |.+|-
T Consensus 14 m~IkkGD~V~Vi~Gkd--KGk~GkV~~V~~~---~~~V~V--EGvN~ 53 (115)
T 2zjr_R 14 LHFKKGDTVIVLSGKH--KGQTGKVLLALPR---DQKVVV--EGVNV 53 (115)
T ss_dssp CSSCTTSEEECCSSSS--TTCEEEEEEEETT---TTEEEE--SSSCB
T ss_pred CcccCCCEEEEeEcCC--CCcEEEEEEEECC---CCEEEE--eCcEe
Confidence 4699999999999753 4678999999986 334554 44443
No 71
>2dnu_A RUH-061, SH3 multiple domains 1; RSGI, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=46.90 E-value=15 Score=22.28 Aligned_cols=21 Identities=29% Similarity=0.729 Sum_probs=16.7
Q ss_pred CCCCCCCCCeeEEeec-cceec
Q 032316 78 PPIGPKRGAKVKILRR-ESYWY 98 (143)
Q Consensus 78 p~igp~RGskVrIlR~-ESYWy 98 (143)
..+..++|++|.|+.+ +.-|+
T Consensus 23 ~eLs~~~Gd~i~v~~~~~~~Ww 44 (71)
T 2dnu_A 23 DEIGFEKGVTVEVIRKNLEGWW 44 (71)
T ss_dssp TBCCBCTTCEEEECCCCSSSEE
T ss_pred CCCcCCCCCEEEEeECCCCCeE
Confidence 4678999999999987 55555
No 72
>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB: 2o31_A 2o9v_A 2o2w_A
Probab=46.71 E-value=17 Score=21.81 Aligned_cols=21 Identities=24% Similarity=0.813 Sum_probs=16.6
Q ss_pred CCCCCCCCCeeEEeec-cceec
Q 032316 78 PPIGPKRGAKVKILRR-ESYWY 98 (143)
Q Consensus 78 p~igp~RGskVrIlR~-ESYWy 98 (143)
.....++|+.|.|+++ ++-|+
T Consensus 21 ~eLs~~~Gd~i~v~~~~~~~Ww 42 (67)
T 2o9s_A 21 VEMSFRKGERITLLRQVDENWY 42 (67)
T ss_dssp TBCCBCTTCEEEEEEECSSSEE
T ss_pred CccCCCCCCEEEEEEecCCCEE
Confidence 3678999999999987 45555
No 73
>2kxd_A 11-MER peptide, SH3 domain of spectrin alpha CHAI; alpha spectrin SH3 domain, SPC-S19P20S circular permutant, S protein; NMR {Synthetic}
Probab=46.65 E-value=15 Score=22.57 Aligned_cols=23 Identities=17% Similarity=0.476 Sum_probs=17.9
Q ss_pred CCCCCCCCCCeeEEeec-cceecc
Q 032316 77 PPPIGPKRGAKVKILRR-ESYWYN 99 (143)
Q Consensus 77 pp~igp~RGskVrIlR~-ESYWyn 99 (143)
+-....++|+.|.|+++ ++-|+.
T Consensus 13 ~~eLs~~~Gd~i~v~~~~~~~Ww~ 36 (73)
T 2kxd_A 13 GREVTMKKGDILTLLNSTNKDWWK 36 (73)
T ss_dssp SCCCCBCTTCEEEEEECCSSSEEE
T ss_pred CCEeeEcCCCEEEEEEecCCCEEE
Confidence 44688999999999997 555653
No 74
>2ysq_A RHO guanine nucleotide exchange factor 9; SH3 domain, CDC42 guanine nucleotide exchange factor (GEF) 9, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=46.50 E-value=18 Score=22.71 Aligned_cols=21 Identities=24% Similarity=0.503 Sum_probs=17.1
Q ss_pred CCCCCCCCeeEEeec-cceecc
Q 032316 79 PIGPKRGAKVKILRR-ESYWYN 99 (143)
Q Consensus 79 ~igp~RGskVrIlR~-ESYWyn 99 (143)
....++|+.|.|+++ +.-|+.
T Consensus 26 eLs~~~Gd~i~v~~~~~~~Ww~ 47 (81)
T 2ysq_A 26 ELAFKAGDVIKVLDASNKDWWW 47 (81)
T ss_dssp SCCCCTTCEEEEEECCSSSEEE
T ss_pred cCCCCCCCEEEEEEEcCcCEEE
Confidence 578999999999997 566654
No 75
>2ct4_A CDC42-interacting protein 4; thyroid receptor interacting protein 10, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=46.36 E-value=20 Score=21.71 Aligned_cols=18 Identities=11% Similarity=0.337 Sum_probs=15.2
Q ss_pred CCCCCCCCCCeeEEeecc
Q 032316 77 PPPIGPKRGAKVKILRRE 94 (143)
Q Consensus 77 pp~igp~RGskVrIlR~E 94 (143)
+..+..++|+.|.|+.+.
T Consensus 21 ~~eLs~~~Gd~i~vl~~~ 38 (70)
T 2ct4_A 21 EGTISMAEGEDLSLMEED 38 (70)
T ss_dssp TTCCCBCTTCEEEEEECC
T ss_pred CCcCCCCCCCEEEEEecc
Confidence 346889999999999975
No 76
>3v2d_Y 50S ribosomal protein L24; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_S 2hgj_X 2hgq_X 2hgu_X 1vsa_S 2j03_Y 2jl6_Y 2jl8_Y 2v47_Y 2v49_Y 2wdi_Y 2wdj_Y 2wdl_Y 2wdn_Y 2wh2_Y 2wh4_Y 2wrj_Y 2wrl_Y 2wro_Y 2wrr_Y ...
Probab=46.32 E-value=18 Score=26.14 Aligned_cols=35 Identities=26% Similarity=0.402 Sum_probs=26.6
Q ss_pred CCCCCCCeeEEeeccceeccccceEEEEcCCCCCcccEEE
Q 032316 80 IGPKRGAKVKILRRESYWYNGIGSVVAVDQDPKSRYPVVV 119 (143)
Q Consensus 80 igp~RGskVrIlR~ESYWyn~vGtVvsVDqs~girYPVvV 119 (143)
.-+++||.|.|++-.. -...|+|..|+.. ++=|+|
T Consensus 5 ~~IkkGD~V~Vi~Gkd--KGk~GkV~~V~~~---~~~ViV 39 (110)
T 3v2d_Y 5 MHVKKGDTVLVASGKY--KGRVGKVKEVLPK---KYAVIV 39 (110)
T ss_dssp CSCCTTSEEEECSSTT--TTCEEEEEEEEGG---GTEEEE
T ss_pred cccCCCCEEEEeEcCC--CCeEeEEEEEECC---CCEEEE
Confidence 4589999999998752 3567999999986 344555
No 77
>2ecz_A Sorbin and SH3 domain-containing protein 1; glycoprotein, membrane, nuclear protein, phosphorylation, polymorphism, transport, structural genomics; NMR {Homo sapiens}
Probab=46.23 E-value=14 Score=22.34 Aligned_cols=21 Identities=24% Similarity=0.813 Sum_probs=16.6
Q ss_pred CCCCCCCCCeeEEeec-cceec
Q 032316 78 PPIGPKRGAKVKILRR-ESYWY 98 (143)
Q Consensus 78 p~igp~RGskVrIlR~-ESYWy 98 (143)
-.+..++|+.|.|+++ +.-|+
T Consensus 22 ~eLs~~~Gd~i~v~~~~~~~Ww 43 (70)
T 2ecz_A 22 VEMSFRKGERITLLRQVDENWY 43 (70)
T ss_dssp TBCCCCTTCBCEEEEEEETTEE
T ss_pred CCcCCCCCCEEEEEEecCCCeE
Confidence 3678999999999997 45555
No 78
>2ega_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=46.08 E-value=17 Score=22.04 Aligned_cols=23 Identities=22% Similarity=0.517 Sum_probs=17.6
Q ss_pred CCCCCCCCCCeeEEeec-cceecc
Q 032316 77 PPPIGPKRGAKVKILRR-ESYWYN 99 (143)
Q Consensus 77 pp~igp~RGskVrIlR~-ESYWyn 99 (143)
+..+..++|+.|.|+.+ ++-|+.
T Consensus 22 ~~eLs~~~Gd~i~v~~~~~~~Ww~ 45 (70)
T 2ega_A 22 NSELSLQAGEVVDVIEKNESGWWF 45 (70)
T ss_dssp SSSCCCCTTCBCEEEEECTTSEEE
T ss_pred CCcccCCCCCEEEEEEccCCCeEE
Confidence 34688999999999987 555553
No 79
>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3, cysteine-rich domain protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=46.02 E-value=19 Score=21.85 Aligned_cols=21 Identities=14% Similarity=0.515 Sum_probs=17.0
Q ss_pred CCCCCCCCeeEEeec-cceecc
Q 032316 79 PIGPKRGAKVKILRR-ESYWYN 99 (143)
Q Consensus 79 ~igp~RGskVrIlR~-ESYWyn 99 (143)
....++|+.|.|+.+ ++-|+.
T Consensus 23 eLs~~~Gd~i~v~~~~~~~Ww~ 44 (68)
T 2dl4_A 23 DLEMRPGDIITLLEDSNEDWWK 44 (68)
T ss_dssp BCCCCTTCEEEEEECCCSSEEE
T ss_pred CcCCCCCCEEEEEEeCCCCEEE
Confidence 578899999999997 566664
No 80
>2dl5_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=45.99 E-value=15 Score=23.02 Aligned_cols=22 Identities=5% Similarity=0.243 Sum_probs=17.5
Q ss_pred CCCCCCCCCeeEEeecc--ceecc
Q 032316 78 PPIGPKRGAKVKILRRE--SYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~E--SYWyn 99 (143)
.....++|++|.|+.+. .-|+.
T Consensus 28 ~eLs~~~Gd~i~v~~~~~~~~Ww~ 51 (78)
T 2dl5_A 28 DELTIEEHEVLEVIEDGDMEDWVK 51 (78)
T ss_dssp TBCCBCSSEEEEEEECCSSSSEEE
T ss_pred CCCCCCCCCEEEEEeccCCCCcEE
Confidence 36789999999999984 56653
No 81
>3u5e_Y L33, YL33, 60S ribosomal protein L26-A; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 2wwa_L 2ww9_L 2wwb_L 3o5h_X 3o58_X 3u5i_Y 4b6a_Y 1s1i_U 3izc_Y 3izs_Y 3jyw_U
Probab=45.93 E-value=17 Score=27.04 Aligned_cols=40 Identities=23% Similarity=0.338 Sum_probs=28.2
Q ss_pred CCCCCCCeeEEeeccceeccccceEEEEcCCCCCcccEEEEeeeeee
Q 032316 80 IGPKRGAKVKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNY 126 (143)
Q Consensus 80 igp~RGskVrIlR~ESYWyn~vGtVvsVDqs~girYPVvVRF~kVNY 126 (143)
.-+++||.|.|++-.. =...|+|..|+.. .+=|+| |.||-
T Consensus 48 ~~IkkgD~V~Vi~Gkd--KGk~GkV~~V~~k---k~~V~V--EgVn~ 87 (127)
T 3u5e_Y 48 LPIRRDDEVLVVRGSK--KGQEGKISSVYRL---KFAVQV--DKVTK 87 (127)
T ss_dssp EECCTTCEEEECSSTT--TTCEEEEEEEEGG---GTEEEE--ETCEE
T ss_pred ccccCCCEEEEeecCC--CCccceEEEEECC---CCEEEE--eCeEE
Confidence 3478999999999752 3456999999986 344554 45543
No 82
>2bz8_A SH3-domain kinase binding protein 1; SH3 domain, CIN85 adaptor protein, CBL ubiquitin ligase; 2.0A {Homo sapiens}
Probab=45.81 E-value=19 Score=21.04 Aligned_cols=22 Identities=14% Similarity=0.447 Sum_probs=17.1
Q ss_pred CCCCCCCCCeeEEeec-cceecc
Q 032316 78 PPIGPKRGAKVKILRR-ESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~-ESYWyn 99 (143)
-....++|+.|.|+.+ ++-|+.
T Consensus 16 ~eLs~~~Gd~i~v~~~~~~~Ww~ 38 (58)
T 2bz8_A 16 DELTISVGEIITNIRKEDGGWWE 38 (58)
T ss_dssp TBCCBCTTCEEEEEECCTTTEEE
T ss_pred CEeeECCCCEEEEEEeCCCCEEE
Confidence 3678999999999997 455553
No 83
>1wx6_A Cytoplasmic protein NCK2; SH3 domain, structural genomics, signal transduction, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=45.70 E-value=16 Score=23.37 Aligned_cols=21 Identities=10% Similarity=0.648 Sum_probs=16.9
Q ss_pred CCCCCCCCeeEEeec---cceecc
Q 032316 79 PIGPKRGAKVKILRR---ESYWYN 99 (143)
Q Consensus 79 ~igp~RGskVrIlR~---ESYWyn 99 (143)
.+..++|++|.|+.+ +.-|+.
T Consensus 33 eLs~~~Gd~i~v~~~~~~~~~Ww~ 56 (91)
T 1wx6_A 33 ELNFEKGETMEVIEKPENDPEWWK 56 (91)
T ss_dssp BCCCCTTCEEEEEECCSSCTTEEE
T ss_pred cccCCCCCEEEEEECCCCCCCcEE
Confidence 688999999999998 455553
No 84
>3iz5_Y 60S ribosomal protein L26 (L24P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_Y
Probab=45.00 E-value=21 Score=27.40 Aligned_cols=29 Identities=24% Similarity=0.320 Sum_probs=23.4
Q ss_pred CCCCCCCeeEEeeccceeccccceEEEEcCC
Q 032316 80 IGPKRGAKVKILRRESYWYNGIGSVVAVDQD 110 (143)
Q Consensus 80 igp~RGskVrIlR~ESYWyn~vGtVvsVDqs 110 (143)
+-+++||.|.|++-.. =...|+|..|+..
T Consensus 47 ~~IkKGD~V~Vi~Gkd--KGk~GkVl~V~~k 75 (150)
T 3iz5_Y 47 IPIRKDDEVQVVRGSY--KGREGKVVQVYRR 75 (150)
T ss_dssp EECCSSSEEEECSSTT--TTCEEEEEEEETT
T ss_pred cccCCCCEEEEeecCC--CCccceEEEEEcC
Confidence 4588999999999752 3457999999986
No 85
>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling protein; 1.80A {Mus musculus}
Probab=44.96 E-value=17 Score=21.42 Aligned_cols=21 Identities=24% Similarity=0.583 Sum_probs=16.5
Q ss_pred CCCCCCCCCeeEEeec-cceec
Q 032316 78 PPIGPKRGAKVKILRR-ESYWY 98 (143)
Q Consensus 78 p~igp~RGskVrIlR~-ESYWy 98 (143)
.....++|+.|.|+.+ ++-|+
T Consensus 21 ~eLs~~~Gd~i~v~~~~~~~Ww 42 (60)
T 2gnc_A 21 RELSFKKGASLLLYHRASEDWW 42 (60)
T ss_dssp TBCCBCTTCEEEEEEEEETTEE
T ss_pred CCcCCCCCCEEEEEEecCCCEE
Confidence 3678999999999997 44554
No 86
>1dzf_A DNA-directed RNA polymerases I, II, and III 27 KD polypeptide; RNA polymerase subunit; 1.9A {Saccharomyces cerevisiae} SCOP: c.52.3.1 d.78.1.1 PDB: 1i3q_E 1i50_E 1i6h_E 1k83_E* 1nik_E 1nt9_E 1pqv_E 1r5u_E 1r9s_E* 1r9t_E* 1sfo_E* 1twa_E* 1twc_E* 1twf_E* 1twg_E* 1twh_E* 1wcm_E 1y1v_E 1y1w_E 1y1y_E ...
Probab=44.81 E-value=7.9 Score=31.02 Aligned_cols=16 Identities=50% Similarity=0.787 Sum_probs=14.1
Q ss_pred CCCCCCCCeeEEeecc
Q 032316 79 PIGPKRGAKVKILRRE 94 (143)
Q Consensus 79 ~igp~RGskVrIlR~E 94 (143)
.+|.++|+.|||.|+-
T Consensus 187 ~~g~k~G~vvkI~R~s 202 (215)
T 1dzf_A 187 YLGLKRGEVVKIIRKS 202 (215)
T ss_dssp HHTCCTTCEEEEECTT
T ss_pred HhCCcCCCEEEEEECC
Confidence 4599999999999983
No 87
>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3 domain/complex, adaptor protein (MONA); 1.5A {Mus musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A 2d0n_A
Probab=44.64 E-value=21 Score=20.72 Aligned_cols=21 Identities=24% Similarity=0.646 Sum_probs=16.6
Q ss_pred CCCCCCCCCeeEEeec-cceec
Q 032316 78 PPIGPKRGAKVKILRR-ESYWY 98 (143)
Q Consensus 78 p~igp~RGskVrIlR~-ESYWy 98 (143)
.....++|+.|.|+.+ ++-|+
T Consensus 16 ~eLs~~~Gd~i~v~~~~~~~Ww 37 (58)
T 1uti_A 16 DELGFRSGEVVEVLDSSNPSWW 37 (58)
T ss_dssp TBCCBCTTCEEEEEECCSSSEE
T ss_pred CCCCCCCCCEEEEEEECCCCEE
Confidence 4678999999999987 45555
No 88
>3h0g_E DNA-directed RNA polymerases I, II, and III subunit rpabc1; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=43.77 E-value=10 Score=30.24 Aligned_cols=15 Identities=60% Similarity=0.931 Sum_probs=13.6
Q ss_pred CCCCCCCeeEEeecc
Q 032316 80 IGPKRGAKVKILRRE 94 (143)
Q Consensus 80 igp~RGskVrIlR~E 94 (143)
.|.++|+.|||.|+-
T Consensus 183 ~g~k~GdVvkI~R~s 197 (210)
T 3h0g_E 183 LGLKRGEVVKIVRRS 197 (210)
T ss_dssp HTCCTTCEEEEECCC
T ss_pred hCCCCCCEEEEEeCC
Confidence 599999999999983
No 89
>1spk_A RSGI RUH-010, riken cDNA 1300006M19; structural genomics, SH3 domain, five-stranded barrel, mouse cDNA; NMR {Mus musculus} SCOP: b.34.2.1
Probab=43.67 E-value=13 Score=22.69 Aligned_cols=22 Identities=14% Similarity=0.286 Sum_probs=17.2
Q ss_pred CCCCCCCCCeeEEeec--cceecc
Q 032316 78 PPIGPKRGAKVKILRR--ESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~--ESYWyn 99 (143)
.....++|+.|.|+++ +.-|+.
T Consensus 23 ~eLs~~~Gd~i~v~~~~~~~gWw~ 46 (72)
T 1spk_A 23 TLLSFAQGDVLTLLIPEEKDGWLY 46 (72)
T ss_dssp SBCCBCTTCEEEECCSSCBTTEEE
T ss_pred CCCcCCCCCEEEEeEccCCCCcEE
Confidence 3578999999999975 566664
No 90
>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A
Probab=43.17 E-value=23 Score=20.52 Aligned_cols=22 Identities=23% Similarity=0.533 Sum_probs=16.8
Q ss_pred CCCCCCCCCeeEEeecc-ceecc
Q 032316 78 PPIGPKRGAKVKILRRE-SYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~E-SYWyn 99 (143)
.....++|+.|.|+.++ +-|+.
T Consensus 16 ~eLs~~~Gd~i~v~~~~~~~Ww~ 38 (57)
T 1cka_A 16 EDLPFKKGDILRIRDKPEEQWWN 38 (57)
T ss_dssp TBCCBCTTCEEEEEECSSSSEEE
T ss_pred CCCCCCCCCEEEEEEecCCCcEE
Confidence 35789999999999873 55543
No 91
>2drm_A Acanthamoeba myosin IB; SH3 domain, contractIle protein; 1.35A {Acanthamoeba} PDB: 2drk_A
Probab=43.13 E-value=22 Score=20.61 Aligned_cols=21 Identities=14% Similarity=0.496 Sum_probs=16.5
Q ss_pred CCCCCCCCCeeEEeecc-ceec
Q 032316 78 PPIGPKRGAKVKILRRE-SYWY 98 (143)
Q Consensus 78 p~igp~RGskVrIlR~E-SYWy 98 (143)
.....++|+.|.|+.+. +-|+
T Consensus 18 ~eLs~~~Gd~i~v~~~~~~~W~ 39 (58)
T 2drm_A 18 DELTFKEGDTIIVHQKDPAGWW 39 (58)
T ss_dssp TBCCBCTTCEEEEEECCTTSEE
T ss_pred CCcCCCCCCEEEEEEecCCCEE
Confidence 35788999999999873 5555
No 92
>1x43_A Endophilin B1, SH3 domain GRB2-like protein B1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=43.12 E-value=19 Score=22.55 Aligned_cols=22 Identities=9% Similarity=0.250 Sum_probs=17.3
Q ss_pred CCCCCCCCCeeEEeec---cceecc
Q 032316 78 PPIGPKRGAKVKILRR---ESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~---ESYWyn 99 (143)
.....++|+.|.|+.+ +.-|+.
T Consensus 32 ~eLs~~~Gd~i~v~~~~~~~~~Ww~ 56 (81)
T 1x43_A 32 TELSLLADEVITVFSVVGMDSDWLM 56 (81)
T ss_dssp TBCCCCTTCEEEEECCTTCCTTEEE
T ss_pred CcCCCCCCCEEEEEEcCCCCCCcEE
Confidence 3678899999999998 456654
No 93
>2jxb_A T-cell surface glycoprotein CD3 epsilon chain, cytoplasmic protein NCK2; T-cell receptor, SH3 domain, immunology, SH2 domain; NMR {Homo sapiens}
Probab=43.08 E-value=18 Score=23.22 Aligned_cols=21 Identities=14% Similarity=0.482 Sum_probs=18.3
Q ss_pred CCCCCCCCeeEEeeccceecc
Q 032316 79 PIGPKRGAKVKILRRESYWYN 99 (143)
Q Consensus 79 ~igp~RGskVrIlR~ESYWyn 99 (143)
....++|+.|.|+.+++-|+.
T Consensus 47 eLs~~~Gd~i~v~~~~~~Ww~ 67 (86)
T 2jxb_A 47 ELDIKKNERLWLLDDSKTWWR 67 (86)
T ss_dssp BCCCCTTEEEEEEECCSSEEE
T ss_pred EeccCCCCEEEEEecCCCeEE
Confidence 577899999999999888875
No 94
>3reb_B Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain binding, signaling, HCK SH3 domain, PR binding; 3.45A {Homo sapiens}
Probab=43.05 E-value=19 Score=22.93 Aligned_cols=22 Identities=14% Similarity=0.528 Sum_probs=18.7
Q ss_pred CCCCCCCCCeeEEeeccceecc
Q 032316 78 PPIGPKRGAKVKILRRESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~ESYWyn 99 (143)
.....++|+.|.|++++.-|+.
T Consensus 18 ~eLs~~~Gd~i~v~~~~~~Ww~ 39 (90)
T 3reb_B 18 DDLSFQKGDQMVVLEESGEWWK 39 (90)
T ss_dssp TBCCBCTTCEEEEEECSSSEEE
T ss_pred CcCCCCCCCEEEEEEeCCCEEE
Confidence 3678999999999999877775
No 95
>2ak5_A RHO guanine nucleotide exchange factor 7; adaptor proteins, CIN85, PIX/COOL, protein-protein interaction, X-RAY, endocytosis; 1.85A {Rattus norvegicus} PDB: 1zsg_A
Probab=42.98 E-value=21 Score=21.15 Aligned_cols=22 Identities=18% Similarity=0.501 Sum_probs=17.0
Q ss_pred CCCCCCCCCeeEEeec-cceecc
Q 032316 78 PPIGPKRGAKVKILRR-ESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~-ESYWyn 99 (143)
.....++|+.|.|+++ ++-|+.
T Consensus 21 ~eLs~~~Gd~i~v~~~~~~~Ww~ 43 (64)
T 2ak5_A 21 DELSFSKGDVIHVTRVEEGGWWE 43 (64)
T ss_dssp TBCCBCTTCEEEEEECCTTSEEE
T ss_pred CcccCCCCCEEEEeEecCCCEEE
Confidence 3678999999999986 455553
No 96
>1wyx_A CRK-associated substrate; beta sheets, cell adhesion; 1.14A {Homo sapiens}
Probab=42.94 E-value=19 Score=21.72 Aligned_cols=21 Identities=14% Similarity=0.536 Sum_probs=17.1
Q ss_pred CCCCCCCCeeEEeecc----ceecc
Q 032316 79 PIGPKRGAKVKILRRE----SYWYN 99 (143)
Q Consensus 79 ~igp~RGskVrIlR~E----SYWyn 99 (143)
....++|+.|.|++++ .-|+.
T Consensus 19 eLs~~~Gd~i~v~~~~~~~~~~Ww~ 43 (69)
T 1wyx_A 19 ELSFRKGDIMTVLEQDTQGLDGWWL 43 (69)
T ss_dssp BCCBCTTCEEEEEETTGGGCTTEEE
T ss_pred ccCCcCCCEEEEeECCCCCCCCcEE
Confidence 6789999999999984 55654
No 97
>2do3_A Transcription elongation factor SPT5; KOW motif, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.34.5.5
Probab=42.63 E-value=18 Score=24.54 Aligned_cols=29 Identities=24% Similarity=0.332 Sum_probs=25.4
Q ss_pred CCCCCCCeeEEeeccceeccccceEEEEcCC
Q 032316 80 IGPKRGAKVKILRRESYWYNGIGSVVAVDQD 110 (143)
Q Consensus 80 igp~RGskVrIlR~ESYWyn~vGtVvsVDqs 110 (143)
.-.+.|+-|||+.- =|=.+.|.|+.||.+
T Consensus 16 K~F~~GDHVkVi~G--~~~getGlVV~v~~d 44 (69)
T 2do3_A 16 KYFKMGDHVKVIAG--RFEGDTGLIVRVEEN 44 (69)
T ss_dssp SSCCTTCEEEESSS--TTTTCEEEEEEECSS
T ss_pred eeccCCCeEEEecc--EEcCceEEEEEEeCC
Confidence 45788999999986 578999999999986
No 98
>3thk_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.70A {Rattus norvegicus} SCOP: b.34.2.1
Probab=42.53 E-value=23 Score=21.44 Aligned_cols=22 Identities=18% Similarity=0.522 Sum_probs=17.5
Q ss_pred CCCCCCCCCeeEEeec-cceecc
Q 032316 78 PPIGPKRGAKVKILRR-ESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~-ESYWyn 99 (143)
.....++|++|.|+.+ ++-|+.
T Consensus 20 ~eLs~~~Gd~i~v~~~~~~~Ww~ 42 (73)
T 3thk_A 20 REVTMKKGDILTLLNSTNKDWWK 42 (73)
T ss_dssp TBCCBCTTCEEEEEECCSSSEEE
T ss_pred CccCCCCCCEEEEEECCCCCeEE
Confidence 3578999999999998 555664
No 99
>2dbm_A SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH3 domain protein 2A, endophilin 1, EEN-B1, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2knb_B 3iql_A
Probab=42.08 E-value=18 Score=22.13 Aligned_cols=22 Identities=23% Similarity=0.640 Sum_probs=17.3
Q ss_pred CCCCCCCCCeeEEeec-cceecc
Q 032316 78 PPIGPKRGAKVKILRR-ESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~-ESYWyn 99 (143)
-....++|+.|.|+++ +.-|+.
T Consensus 22 ~eLs~~~Gd~i~v~~~~~~~Ww~ 44 (73)
T 2dbm_A 22 GELGFKEGDIITLTNQIDENWYE 44 (73)
T ss_dssp TCCCBCTTCEEECCBCSSSSEEE
T ss_pred CCccCCCCCEEEEEEecCCCEEE
Confidence 3678999999999987 555654
No 100
>2jng_A Cullin-7, CUL-7; P53 binding domain, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Homo sapiens} SCOP: b.34.9.4 PDB: 2juf_A
Probab=41.78 E-value=33 Score=25.25 Aligned_cols=39 Identities=21% Similarity=0.279 Sum_probs=29.6
Q ss_pred CCCCCeeEEeec-cceeccccceEEEEcCCCCCcccEEEEeee
Q 032316 82 PKRGAKVKILRR-ESYWYNGIGSVVAVDQDPKSRYPVVVRFNK 123 (143)
Q Consensus 82 p~RGskVrIlR~-ESYWyn~vGtVvsVDqs~girYPVvVRF~k 123 (143)
++.|..||.++. |.-=.-|+|.|. +|.+ |+. ||-|-...
T Consensus 22 l~pGM~VR~~~dyeev~~GD~G~vl-~s~~-Gl~-~vQv~W~~ 61 (105)
T 2jng_A 22 LQPGMRVRMLDDYEEISAGDEGEFR-QSNN-GVP-PVQVFWES 61 (105)
T ss_dssp CCTTCEEEECSCBTTBCTTCEEEEE-EECT-TSS-EEEEEETT
T ss_pred CCCccEEeeehhhhhhccCCceeEE-ecCC-CCc-cceeeehh
Confidence 578999999986 223346889999 8876 877 98887663
No 101
>2a28_A BZZ1 protein; SH3 domain, signaling protein; 1.07A {Saccharomyces cerevisiae}
Probab=41.73 E-value=26 Score=20.15 Aligned_cols=21 Identities=19% Similarity=0.457 Sum_probs=16.6
Q ss_pred CCCCCCCCCeeEEeeccc--eec
Q 032316 78 PPIGPKRGAKVKILRRES--YWY 98 (143)
Q Consensus 78 p~igp~RGskVrIlR~ES--YWy 98 (143)
.....++|+.|.|+++.. -|+
T Consensus 15 ~eLs~~~Gd~i~v~~~~~~~~W~ 37 (54)
T 2a28_A 15 DEISIDPGDIITVIRGDDGSGWT 37 (54)
T ss_dssp TBCCBCTTCEEEEEECCCSSSEE
T ss_pred CCccCCCCCEEEEEEecCCCCEE
Confidence 467889999999999863 454
No 102
>4a17_S RPL26, 60S ribosomal protein L21; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_S 4a1c_S 4a1e_S
Probab=41.39 E-value=27 Score=26.36 Aligned_cols=28 Identities=21% Similarity=0.331 Sum_probs=22.7
Q ss_pred CCCCCCeeEEeeccceeccccceEEEEcCC
Q 032316 81 GPKRGAKVKILRRESYWYNGIGSVVAVDQD 110 (143)
Q Consensus 81 gp~RGskVrIlR~ESYWyn~vGtVvsVDqs 110 (143)
-+++||.|.|++-. .=...|+|..|+..
T Consensus 48 ~IkkgD~V~Vi~Gk--dKGk~GkV~~V~~k 75 (135)
T 4a17_S 48 PVRKDDEVLIVRGK--FKGNKGKVTQVYRK 75 (135)
T ss_dssp ECCTTCEEEECSST--TTTCEEEEEEEETT
T ss_pred cccCCCEEEEeecC--CCCceeeEEEEEcC
Confidence 47899999999975 23456999999986
No 103
>1wjq_A KIAA1798 protein; MBT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.9.3
Probab=41.36 E-value=40 Score=24.09 Aligned_cols=43 Identities=21% Similarity=0.401 Sum_probs=32.0
Q ss_pred CCCCCCCCCCeeEEeeccceeccccceEEEEcCCCCCcccEEEEeeee
Q 032316 77 PPPIGPKRGAKVKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKV 124 (143)
Q Consensus 77 pp~igp~RGskVrIlR~ESYWyn~vGtVvsVDqs~girYPVvVRF~kV 124 (143)
.|+.+.+.|.|+...-+..=+.--+-||+.|+- +=+.|+||.-
T Consensus 9 ~p~~~F~~GMKLEAvD~~~p~~icvATV~~v~g-----~rl~v~fDGw 51 (107)
T 1wjq_A 9 KPPHGFQKKMKLEVVDKRNPMFIRVATVADTDD-----HRVKVHFDGW 51 (107)
T ss_dssp CCSSSCCSSCEEEEECTTCTTCEEEEEEEEECS-----SCEEEECSSS
T ss_pred CCcccCCCCCEEEEEcCCCCCcEEeEEEEEecC-----CEEEEEeCCC
Confidence 457899999999998777655555888888842 3478899853
No 104
>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early endosome, signaling protein/signaling protein complex; 1.70A {Mus musculus} SCOP: b.34.2.1
Probab=41.20 E-value=25 Score=20.81 Aligned_cols=22 Identities=18% Similarity=0.545 Sum_probs=16.6
Q ss_pred CCCCCCCCCeeEEeec-cceecc
Q 032316 78 PPIGPKRGAKVKILRR-ESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~-ESYWyn 99 (143)
.....++|+.|.|+.+ ++-|+.
T Consensus 20 ~eLs~~~Gd~i~v~~~~~~~Ww~ 42 (62)
T 1uj0_A 20 NELTFKHGELITVLDDSDANWWQ 42 (62)
T ss_dssp TBCCBCTTCEEEEEECCSSSEEE
T ss_pred CCcCCCCCCEEEEEEeCCCCEEE
Confidence 3578999999999986 344543
No 105
>2dl7_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=40.98 E-value=23 Score=21.68 Aligned_cols=21 Identities=19% Similarity=0.480 Sum_probs=16.6
Q ss_pred CCCCCCCCeeEEeec----cceecc
Q 032316 79 PIGPKRGAKVKILRR----ESYWYN 99 (143)
Q Consensus 79 ~igp~RGskVrIlR~----ESYWyn 99 (143)
....++|+.|.|+.+ +.-|+.
T Consensus 24 eLsf~~Gd~i~v~~~~~~~~~~Ww~ 48 (73)
T 2dl7_A 24 ELSFPEGAIIRILNKENQDDDGFWE 48 (73)
T ss_dssp BCCBCTTCEEEEEECCCSSSSSCEE
T ss_pred cCCCCCCCEEEEEECCCCCCCCcEE
Confidence 578899999999987 455654
No 106
>1zlm_A Osteoclast stimulating factor 1; beta barrel, signaling protein; 1.07A {Homo sapiens}
Probab=40.96 E-value=26 Score=20.44 Aligned_cols=22 Identities=14% Similarity=0.353 Sum_probs=16.9
Q ss_pred CCCCCCCCCeeEEeec-cceecc
Q 032316 78 PPIGPKRGAKVKILRR-ESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~-ESYWyn 99 (143)
.....++|+.|.|+.+ ++-|+.
T Consensus 18 ~eLs~~~Gd~i~v~~~~~~~Ww~ 40 (58)
T 1zlm_A 18 DELYFEEGDIIYITDMSDTNWWK 40 (58)
T ss_dssp TBCCBCTTCEEEEEECCSSSEEE
T ss_pred CCccCCCCCEEEEEEeCCCCEEE
Confidence 3678999999999986 345653
No 107
>2g6f_X RHO guanine nucleotide exchange factor 7; SH3 domain, peptide interaction, signaling protein; HET: NCO; 0.92A {Rattus norvegicus} PDB: 2df6_A* 2p4r_A 2esw_A
Probab=40.91 E-value=25 Score=20.58 Aligned_cols=22 Identities=18% Similarity=0.501 Sum_probs=16.9
Q ss_pred CCCCCCCCCeeEEeec-cceecc
Q 032316 78 PPIGPKRGAKVKILRR-ESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~-ESYWyn 99 (143)
-....++|+.|.|+++ ++-|+.
T Consensus 19 ~eLs~~~Gd~i~v~~~~~~~Ww~ 41 (59)
T 2g6f_X 19 DELSFSKGDVIHVTRVEEGGWWE 41 (59)
T ss_dssp TBCCBCTTCEEEEEEECTTSEEE
T ss_pred CCcCCCCCCEEEEEEecCCCEEE
Confidence 4678899999999986 455553
No 108
>1tuc_A Alpha-spectrin; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton; 2.02A {Gallus gallus} SCOP: b.34.2.1
Probab=40.56 E-value=23 Score=21.31 Aligned_cols=21 Identities=19% Similarity=0.561 Sum_probs=16.3
Q ss_pred CCCCCCCCeeEEeec-cceecc
Q 032316 79 PIGPKRGAKVKILRR-ESYWYN 99 (143)
Q Consensus 79 ~igp~RGskVrIlR~-ESYWyn 99 (143)
....++|+.|.|+++ ++-|+.
T Consensus 5 eLs~~~Gd~i~v~~~~~~~Ww~ 26 (63)
T 1tuc_A 5 EVTMKKGDILTLLNSTNKDWWK 26 (63)
T ss_dssp CCCBCTTCEEEEEECCSSSEEE
T ss_pred ccCCCCCCEEEEEEecCCCEEE
Confidence 567899999999987 455554
No 109
>1g2b_A Spectrin alpha chain; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton, metal binding protein; 1.12A {Gallus gallus} SCOP: b.34.2.1 PDB: 1tud_A
Probab=40.52 E-value=24 Score=21.02 Aligned_cols=20 Identities=20% Similarity=0.576 Sum_probs=15.7
Q ss_pred CCCCCCCCeeEEeec-cceec
Q 032316 79 PIGPKRGAKVKILRR-ESYWY 98 (143)
Q Consensus 79 ~igp~RGskVrIlR~-ESYWy 98 (143)
....++|+.+.|+++ +.-|+
T Consensus 37 eLsf~~Gd~i~v~~~~~~~Ww 57 (62)
T 1g2b_A 37 EVTMKKGDILTLLNSTNKDWW 57 (62)
T ss_dssp BCCBCTTCEEEEEECCSSSEE
T ss_pred ccCCCCCCEEEEEEecCCCEE
Confidence 577899999999997 34444
No 110
>2nwm_A Vinexin; cell adhesion; NMR {Homo sapiens}
Probab=40.49 E-value=23 Score=21.65 Aligned_cols=22 Identities=18% Similarity=0.451 Sum_probs=17.2
Q ss_pred CCCCCCCCCeeEEeec-cceecc
Q 032316 78 PPIGPKRGAKVKILRR-ESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~-ESYWyn 99 (143)
-....++|+.|.|+.+ ++-|+.
T Consensus 16 ~eLs~~~Gd~i~v~~~~~~~Ww~ 38 (65)
T 2nwm_A 16 KELTLQKGDIVYIHKEVDKNWLE 38 (65)
T ss_dssp TBCCBCTTCEEEEEECCTTTCEE
T ss_pred CccCCcCCCEEEEEEecCCCEEE
Confidence 3678999999999987 456663
No 111
>1s1n_A Nephrocystin 1; beta barrel, cell adhesion; NMR {Homo sapiens}
Probab=40.43 E-value=18 Score=21.75 Aligned_cols=22 Identities=14% Similarity=0.413 Sum_probs=17.0
Q ss_pred CCCCCCCCCCeeEEeec-cceec
Q 032316 77 PPPIGPKRGAKVKILRR-ESYWY 98 (143)
Q Consensus 77 pp~igp~RGskVrIlR~-ESYWy 98 (143)
+..+..++|+.|.|+.+ ++-|+
T Consensus 24 ~~eLs~~~Gd~i~v~~~~~~~Ww 46 (68)
T 1s1n_A 24 VGDLTFKKGEILLVIEKKPDGWW 46 (68)
T ss_dssp SSCCCBCSSEEEEECSCCSSSEE
T ss_pred CCcCCCCCCCEEEEEEcCCCCeE
Confidence 34688999999999987 34455
No 112
>2cub_A Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor, tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=40.41 E-value=20 Score=23.01 Aligned_cols=21 Identities=19% Similarity=0.588 Sum_probs=17.1
Q ss_pred CCCCCCCCeeEEeec-cceecc
Q 032316 79 PIGPKRGAKVKILRR-ESYWYN 99 (143)
Q Consensus 79 ~igp~RGskVrIlR~-ESYWyn 99 (143)
.+..++|++|.|+.+ +.-|+.
T Consensus 33 eLs~~~Gd~i~v~~~~~~gWw~ 54 (88)
T 2cub_A 33 ELSLIKGTKVIVMEKCSDGWWR 54 (88)
T ss_dssp BCCCCTTEEEEEEEECTTSEEE
T ss_pred CcCCCCCCEEEEEEccCCCeEE
Confidence 578999999999998 566663
No 113
>2rf0_A Mitogen-activated protein kinase kinase kinase 10; MAP3K10, MLK2, SH3 domain, TKL kinase, MKN28, structural GEN structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=40.38 E-value=22 Score=23.43 Aligned_cols=16 Identities=25% Similarity=0.586 Sum_probs=14.1
Q ss_pred CCCCCCCCCeeEEeec
Q 032316 78 PPIGPKRGAKVKILRR 93 (143)
Q Consensus 78 p~igp~RGskVrIlR~ 93 (143)
.....++|+.|.|+.+
T Consensus 44 ~ELsf~~GD~I~Vl~~ 59 (89)
T 2rf0_A 44 EELTLRRGDRVQVLSQ 59 (89)
T ss_dssp TBCCBCTTCEEEEEEC
T ss_pred CccccCCCCEEEEEec
Confidence 3578999999999997
No 114
>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3 domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A
Probab=40.01 E-value=26 Score=20.63 Aligned_cols=22 Identities=23% Similarity=0.428 Sum_probs=16.9
Q ss_pred CCCCCCCCCeeEEeec-cceecc
Q 032316 78 PPIGPKRGAKVKILRR-ESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~-ESYWyn 99 (143)
.....++|+.|.|+.+ ++-|+.
T Consensus 19 ~eLs~~~Gd~i~v~~~~~~~W~~ 41 (60)
T 1w70_A 19 LELNFKAGDVIFLLSRINKDWLE 41 (60)
T ss_dssp TBCCBCTTCEEEEEEECSSSEEE
T ss_pred CCccCCCCCEEEEEEeCCCCeEE
Confidence 3578999999999986 455553
No 115
>3c0c_A Endophilin-A2; endocytosis, SH3, voltage-gated calcium channel, endosome, L binding, membrane, phosphoprotein, proto-oncogene, SH3 DOMA; 1.70A {Rattus norvegicus}
Probab=39.75 E-value=25 Score=21.58 Aligned_cols=22 Identities=18% Similarity=0.632 Sum_probs=17.4
Q ss_pred CCCCCCCCCeeEEeec-cceecc
Q 032316 78 PPIGPKRGAKVKILRR-ESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~-ESYWyn 99 (143)
.....++|+.|.|+.+ ++-|+.
T Consensus 28 ~eLs~~~Gd~i~v~~~~~~~W~~ 50 (73)
T 3c0c_A 28 GELGFREGDLITLTNQIDENWYE 50 (73)
T ss_dssp TBCCBCTTCEEEEEEECSSSEEE
T ss_pred CCccCcCCCEEEEEEecCCCEEE
Confidence 3688999999999987 555654
No 116
>1uhc_A KIAA1010 protein; beta barrel, SH3, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=39.68 E-value=24 Score=21.97 Aligned_cols=17 Identities=24% Similarity=0.282 Sum_probs=14.6
Q ss_pred CCCCCCCCCeeEEeecc
Q 032316 78 PPIGPKRGAKVKILRRE 94 (143)
Q Consensus 78 p~igp~RGskVrIlR~E 94 (143)
-....++|++|.|++++
T Consensus 28 ~eLs~~~Gd~i~vl~~~ 44 (79)
T 1uhc_A 28 NELSVSANQKLKILEFK 44 (79)
T ss_dssp SBCCBCTTCEEEEEESC
T ss_pred CccCCCCCCEEEEEECC
Confidence 35789999999999985
No 117
>1ujy_A RHO guanine nucleotide exchange factor 6; structural genomics, SH3 domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=39.55 E-value=19 Score=22.20 Aligned_cols=22 Identities=18% Similarity=0.441 Sum_probs=17.2
Q ss_pred CCCCCCCCCeeEEeec-cceecc
Q 032316 78 PPIGPKRGAKVKILRR-ESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~-ESYWyn 99 (143)
-.+..++|+.|.|+.+ +.-|+.
T Consensus 25 ~eLs~~~Gd~i~v~~~~~~~Ww~ 47 (76)
T 1ujy_A 25 DELSVCKGDIIYVTRVEEGGWWE 47 (76)
T ss_dssp TSCCBCSSCCEEESSCCSSSCEE
T ss_pred CcccCCCCCEEEEEEecCCCEEE
Confidence 3678999999999987 455653
No 118
>4f14_A Nebulette; SH3 domain, heart muscle, actin-binding protein-peptide COMP; 1.20A {Homo sapiens} PDB: 1ark_A 1neb_A 3i35_A
Probab=39.46 E-value=28 Score=20.27 Aligned_cols=20 Identities=10% Similarity=0.335 Sum_probs=16.2
Q ss_pred CCCCCCCCeeEEeec-cceec
Q 032316 79 PIGPKRGAKVKILRR-ESYWY 98 (143)
Q Consensus 79 ~igp~RGskVrIlR~-ESYWy 98 (143)
....++|+.|.|+.+ ++-|+
T Consensus 22 eLs~~~Gd~i~v~~~~~~~W~ 42 (64)
T 4f14_A 22 EVSFRDGDYIVNVQPIDDGWM 42 (64)
T ss_dssp BCCBCTTCEEEEEEECSSSEE
T ss_pred cCCCCCCCEEEEEEeCCCCeE
Confidence 578999999999987 45555
No 119
>3h8z_A FragIle X mental retardation syndrome-related Pro; tudor domains, FXR2, structura genomics, structural genomics consortium, SGC; 1.92A {Homo sapiens} PDB: 3o8v_A 3kuf_A 2bkd_N*
Probab=39.27 E-value=58 Score=23.89 Aligned_cols=40 Identities=23% Similarity=0.488 Sum_probs=26.5
Q ss_pred CCCCCCCeeEEeeccc-----eeccccceEEEEcCCCCCcccEEEEeeeeeeccccc
Q 032316 80 IGPKRGAKVKILRRES-----YWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVST 131 (143)
Q Consensus 80 igp~RGskVrIlR~ES-----YWyn~vGtVvsVDqs~girYPVvVRF~kVNY~gvsT 131 (143)
..+.-|++|.++-+.. =|| .|+|..+.-+ |-.|.|.|..+
T Consensus 59 ~~f~~gd~VEV~~~~~d~ep~gWw--~a~I~~~kg~----------f~~V~y~~~~~ 103 (128)
T 3h8z_A 59 KEITEGDEVEVYSRANEQEPCGWW--LARVRMMKGD----------FYVIEYAACDA 103 (128)
T ss_dssp -CCCTTCEEEEEECC---CCCEEE--EEEEEEEETT----------EEEEEETTC--
T ss_pred cCCCCCCEEEEEecCCCCCcCccE--EEEEEEeeCC----------EEEEEEcCCCC
Confidence 4689999999998742 255 4788777533 55677887664
No 120
>3ulr_B SRC substrate cortactin; SH3, protein-protein interaction, hydrolase, protein binding; 1.65A {Mus musculus} SCOP: b.34.2.0 PDB: 2d1x_A
Probab=39.09 E-value=29 Score=20.43 Aligned_cols=22 Identities=9% Similarity=0.250 Sum_probs=17.3
Q ss_pred CCCCCCCCCeeEEeec-cceecc
Q 032316 78 PPIGPKRGAKVKILRR-ESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~-ESYWyn 99 (143)
.....++|+.|.|+.+ +.-|+.
T Consensus 24 ~eLs~~~Gd~i~v~~~~~~~Ww~ 46 (65)
T 3ulr_B 24 DEISFDPDDIITNIEMIDDGWWR 46 (65)
T ss_dssp TBCCBCTTCEEEEEECCSSSEEE
T ss_pred CEeeEecCCEEEEEEecCCCEEE
Confidence 3578999999999988 456664
No 121
>2kxc_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 1; IRTKS-SH3, espfu, complex structure, protein binding; NMR {Homo sapiens}
Probab=39.03 E-value=16 Score=21.96 Aligned_cols=21 Identities=14% Similarity=0.343 Sum_probs=16.7
Q ss_pred CCCCCCCCCeeEEeec--cceec
Q 032316 78 PPIGPKRGAKVKILRR--ESYWY 98 (143)
Q Consensus 78 p~igp~RGskVrIlR~--ESYWy 98 (143)
.....++|+.|.|+.+ ++-|+
T Consensus 22 ~eLs~~~Gd~i~v~~~~~~~~Ww 44 (67)
T 2kxc_A 22 TLLSFAQGDVITLLIPEEKDGWL 44 (67)
T ss_dssp SBCCBCTTCEEEESSSSCBTTEE
T ss_pred CCCcCCCCCEEEEeECCCCCCcE
Confidence 3578999999999975 56665
No 122
>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP: b.34.2.1
Probab=38.93 E-value=26 Score=21.23 Aligned_cols=22 Identities=18% Similarity=0.536 Sum_probs=17.1
Q ss_pred CCCCCCCCCeeEEee--ccceecc
Q 032316 78 PPIGPKRGAKVKILR--RESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR--~ESYWyn 99 (143)
..+..++|+.|.|+. .++-|+.
T Consensus 26 ~eLs~~~Gd~i~v~~~~~~~~Ww~ 49 (71)
T 1csk_A 26 QDLPFCKGDVLTIVAVTKDPNWYK 49 (71)
T ss_dssp TBCCBCTTCEEEEEEECSSTTEEE
T ss_pred CcCCCCCCCEEEEeECCCCCCCEE
Confidence 468899999999998 3455654
No 123
>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure, signaling protein; NMR {Homo sapiens}
Probab=38.85 E-value=25 Score=21.67 Aligned_cols=22 Identities=23% Similarity=0.640 Sum_probs=16.9
Q ss_pred CCCCCCCCCeeEEeec-cceecc
Q 032316 78 PPIGPKRGAKVKILRR-ESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~-ESYWyn 99 (143)
.....++|+.|.|+++ +.-|+.
T Consensus 18 ~eLsf~~Gd~i~v~~~~~~~Ww~ 40 (68)
T 2ew3_A 18 GELGFKEGDIITLTNQIDENWYE 40 (68)
T ss_dssp TBCCBCTTCEEEEEEESSSSEEE
T ss_pred CccCCCCCCEEEEEEecCCCEEE
Confidence 3678999999999986 455553
No 124
>1x69_A Cortactin isoform A; SH3 domain, CTTN, oncogene EMS1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=38.65 E-value=25 Score=21.93 Aligned_cols=22 Identities=9% Similarity=0.250 Sum_probs=17.1
Q ss_pred CCCCCCCCCeeEEeec-cceecc
Q 032316 78 PPIGPKRGAKVKILRR-ESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~-ESYWyn 99 (143)
.....++|+.|.|+.+ +.-|+.
T Consensus 32 ~eLs~~~Gd~i~v~~~~~~~Ww~ 54 (79)
T 1x69_A 32 DEISFDPDDIITNIEMIDDGWWR 54 (79)
T ss_dssp SBCCCCTTCEEEEEEECSSSEEE
T ss_pred CCcCcCCCCEEEEeEecCCCeEE
Confidence 4678999999999987 555553
No 125
>3dlm_A Histone-lysine N-methyltransferase setdb1; setdb1_human, structural genomics, structural genomics consortium, SGC, alternative splicing; 1.77A {Homo sapiens}
Probab=38.44 E-value=54 Score=26.39 Aligned_cols=41 Identities=27% Similarity=0.398 Sum_probs=33.8
Q ss_pred CCCCCCCCCCCCeeEEeeccceeccccceEEEEcCCCCCcccEEEEeee
Q 032316 75 PKPPPIGPKRGAKVKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNK 123 (143)
Q Consensus 75 ~kpp~igp~RGskVrIlR~ESYWyn~vGtVvsVDqs~girYPVvVRF~k 123 (143)
|-+|-+-.++|+.+++-|..-.|+ .+|..||-| =|.|+|+.
T Consensus 152 P~rpmv~~~~GQ~i~~E~~g~w~~---~~V~~vD~S-----Lv~v~f~~ 192 (213)
T 3dlm_A 152 PNRPMVLLKSGQLIKTEWEGTWWK---SRVEEVDGS-----LVRILFLD 192 (213)
T ss_dssp TCCCCCCCCTTCEEEEEETTEEEE---EEEEEEETT-----EEEEEETT
T ss_pred CCCceEEcCCCCEEEEEecCcEEE---EEEEEEcce-----eEEEEEcC
Confidence 467788899999999988877775 789999998 37788874
No 126
>1hsq_A Phospholipase C-gamma (SH3 domain); phosphoric diester hydrolase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2hsp_A
Probab=38.07 E-value=14 Score=22.58 Aligned_cols=23 Identities=13% Similarity=0.332 Sum_probs=17.8
Q ss_pred CCCCCCCCCCeeEEeec-cceecc
Q 032316 77 PPPIGPKRGAKVKILRR-ESYWYN 99 (143)
Q Consensus 77 pp~igp~RGskVrIlR~-ESYWyn 99 (143)
+..+..++|+.|.|+.+ ++-|+.
T Consensus 20 ~~eLs~~~Gd~i~v~~~~~~~Ww~ 43 (71)
T 1hsq_A 20 EDELTFIKSAIIQNVEKQEGGWWR 43 (71)
T ss_dssp SSSCCCCTTCCCBSCCCBTTTEEC
T ss_pred CCccCCCCCCEEEEEEecCCCEEE
Confidence 34688999999999986 555654
No 127
>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2, protei binding, chronic myeloid leukemia; 1.53A {Homo sapiens}
Probab=37.94 E-value=27 Score=20.95 Aligned_cols=22 Identities=14% Similarity=0.501 Sum_probs=16.9
Q ss_pred CCCCCCCCCeeEEeec-cceecc
Q 032316 78 PPIGPKRGAKVKILRR-ESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~-ESYWyn 99 (143)
.....++|+.|.|+.+ ++-|+.
T Consensus 21 ~eLs~~~Gd~i~v~~~~~~~Ww~ 43 (69)
T 4esr_A 21 DELTIHRGDIIRVFFKDNEDWWY 43 (69)
T ss_dssp TBCCBCTTCEEEEEEECSSSEEE
T ss_pred CcCCCCCCCEEEEEEecCCCeEE
Confidence 3578999999999987 355554
No 128
>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A
Probab=37.77 E-value=32 Score=20.03 Aligned_cols=21 Identities=10% Similarity=0.246 Sum_probs=15.9
Q ss_pred CCCCCCCCCeeEEeec-cceec
Q 032316 78 PPIGPKRGAKVKILRR-ESYWY 98 (143)
Q Consensus 78 p~igp~RGskVrIlR~-ESYWy 98 (143)
.....++|+.|.|+++ ++-|+
T Consensus 15 ~eLs~~~Gd~i~v~~~~~~~Ww 36 (58)
T 1jo8_A 15 NELTFVENDKIINIEFVDDDWW 36 (58)
T ss_dssp TBCCBCTTCEEEEEECCSSSEE
T ss_pred CCcccCCCCEEEEEEecCCCcE
Confidence 3678899999999996 34443
No 129
>2fei_A CD2-associated protein; CMS SH3 domain, structural protein; NMR {Homo sapiens}
Probab=37.77 E-value=22 Score=21.80 Aligned_cols=22 Identities=23% Similarity=0.430 Sum_probs=17.3
Q ss_pred CCCCCCCCCeeEEeec-cceecc
Q 032316 78 PPIGPKRGAKVKILRR-ESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~-ESYWyn 99 (143)
.....++|+.|.|+.+ ++-|+.
T Consensus 16 ~eLs~~~Gd~i~v~~~~~~gWw~ 38 (65)
T 2fei_A 16 DELELKVGDIIDINEEVEEGWWS 38 (65)
T ss_dssp TBCCCCTTCEEECCCCSSSSEEE
T ss_pred CccCCCCCCEEEEEEecCCCEEE
Confidence 3678899999999987 456664
No 130
>1uff_A Intersectin 2; beta barrel, SH3 domain, endocytosis, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=37.50 E-value=25 Score=22.77 Aligned_cols=21 Identities=14% Similarity=0.366 Sum_probs=16.7
Q ss_pred CCCCCCCCeeEEeec---cceecc
Q 032316 79 PIGPKRGAKVKILRR---ESYWYN 99 (143)
Q Consensus 79 ~igp~RGskVrIlR~---ESYWyn 99 (143)
....++|+.|.|+++ +.-|+.
T Consensus 21 eLsf~~Gd~i~v~~~~~~~~gWw~ 44 (93)
T 1uff_A 21 EMSFNSGDIIQVDEKTVGEPGWLY 44 (93)
T ss_dssp CCCBCTTCEEEECSSCCCSSSEEE
T ss_pred CcCCCCCCEEEEeEccCCCCCEEE
Confidence 578999999999987 455553
No 131
>2ekh_A SH3 and PX domain-containing protein 2A; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.50 E-value=31 Score=21.70 Aligned_cols=21 Identities=29% Similarity=0.643 Sum_probs=16.0
Q ss_pred CCCCCCCCCeeEEeecc-ceec
Q 032316 78 PPIGPKRGAKVKILRRE-SYWY 98 (143)
Q Consensus 78 p~igp~RGskVrIlR~E-SYWy 98 (143)
..+..++|++|.|+++. +-|+
T Consensus 23 ~eLs~~~Gd~i~vl~~~~~gWw 44 (80)
T 2ekh_A 23 SEISFPAGVEVQVLEKQESGWW 44 (80)
T ss_dssp TSCCBCTTCEEEEEEECTTSEE
T ss_pred CccCcCCCCEEEEEEeCCCCeE
Confidence 35789999999999874 3344
No 132
>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1
Probab=37.32 E-value=32 Score=20.91 Aligned_cols=21 Identities=19% Similarity=0.498 Sum_probs=15.9
Q ss_pred CCCCCCCCCeeEEeecc-ceec
Q 032316 78 PPIGPKRGAKVKILRRE-SYWY 98 (143)
Q Consensus 78 p~igp~RGskVrIlR~E-SYWy 98 (143)
.....++|+.|.|+.+. +=|+
T Consensus 18 ~eLsf~~Gd~i~v~~~~~~~Ww 39 (65)
T 1b07_A 18 EDLPFKKGDILRIRDKPEEQWW 39 (65)
T ss_dssp TBCCBCTTCEEEEEECSSSSEE
T ss_pred CccCCcCCCEEEEEEecCCCeE
Confidence 35778999999999973 4444
No 133
>4e6r_A Cytoplasmic protein NCK2; SH3 domain, protein binding, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MLY; 2.20A {Homo sapiens} PDB: 2frw_A 2js0_A
Probab=37.16 E-value=32 Score=19.67 Aligned_cols=23 Identities=17% Similarity=0.527 Sum_probs=17.8
Q ss_pred CCCCCCCCCeeEEeecc-ceeccc
Q 032316 78 PPIGPKRGAKVKILRRE-SYWYNG 100 (143)
Q Consensus 78 p~igp~RGskVrIlR~E-SYWyn~ 100 (143)
.....++|+.|.|+.+. +-|+..
T Consensus 16 ~eLs~~~Gd~i~v~~~~~~~W~~g 39 (58)
T 4e6r_A 16 DELSLVXGSRVTVMEXCSDGWWRG 39 (58)
T ss_dssp TBCCBCTTCEEEEEEECTTSEEEE
T ss_pred CEeeEeCCCEEEEeEcCCCCEEEE
Confidence 35789999999999885 556643
No 134
>2biv_A SCML2 protein, sex COMB on midleg-like protein 2; MBT, malignant brain tumor, transcription factor; 1.7A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 PDB: 1oi1_A 2vyt_A* 2p0k_A
Probab=37.13 E-value=75 Score=25.11 Aligned_cols=43 Identities=21% Similarity=0.319 Sum_probs=29.0
Q ss_pred CCCCCCCCCCCeeEEeeccceeccccceEEEEcCCCCCcccEEEEeee
Q 032316 76 KPPPIGPKRGAKVKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNK 123 (143)
Q Consensus 76 kpp~igp~RGskVrIlR~ESYWyn~vGtVvsVDqs~girYPVvVRF~k 123 (143)
.++.-+.+.|.|+..+-+-.=..--+.||+.|.- -| +.|+||.
T Consensus 166 ~~~~~~F~~GmKLEavD~~~p~~icvATV~~v~g---~r--l~v~fDg 208 (243)
T 2biv_A 166 KPPLNNFKVGMKLEAIDKKNPYLICPATIGDVKG---DE--VHITFDG 208 (243)
T ss_dssp CCSSCCCCTTCEEEEECTTSTTCEEEEEEEEEET---TE--EEEEETT
T ss_pred CCccccccCCCEEEEEccCCCCeEEEEEEEEecC---CE--EEEEECC
Confidence 4456799999999998544322333778888864 35 4688874
No 135
>2e6z_A Transcription elongation factor SPT5; KOW motif, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.05 E-value=19 Score=22.67 Aligned_cols=30 Identities=27% Similarity=0.406 Sum_probs=24.7
Q ss_pred CCCCCCCCeeEEeeccceeccccceEEEEcCC
Q 032316 79 PIGPKRGAKVKILRRESYWYNGIGSVVAVDQD 110 (143)
Q Consensus 79 ~igp~RGskVrIlR~ESYWyn~vGtVvsVDqs 110 (143)
.+.++.|+.|+|..-+ |=+-.|+|..||.+
T Consensus 5 ~~~f~~GD~V~V~~Gp--f~g~~G~V~evd~e 34 (59)
T 2e6z_A 5 SSGFQPGDNVEVCEGE--LINLQGKILSVDGN 34 (59)
T ss_dssp CSSCCTTSEEEECSST--TTTCEEEECCCBTT
T ss_pred cccCCCCCEEEEeecC--CCCCEEEEEEEeCC
Confidence 3567899999999766 67788999999974
No 136
>1wi7_A SH3-domain kinase binding protein 1; beta barrel, SH3KBP1, RUK, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=36.53 E-value=18 Score=21.81 Aligned_cols=22 Identities=18% Similarity=0.478 Sum_probs=17.0
Q ss_pred CCCCCCCCCeeEEeec-cceecc
Q 032316 78 PPIGPKRGAKVKILRR-ESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~-ESYWyn 99 (143)
.....++|+.|.|+.+ +.-|+.
T Consensus 22 ~eLs~~~Gd~i~v~~~~~~~Ww~ 44 (68)
T 1wi7_A 22 DELELKVGDIIEVVGEVEEGWWE 44 (68)
T ss_dssp TBCCBCTTCEECCCEEEETTEEE
T ss_pred CCccCcCCCEEEEEEcCCCCeEE
Confidence 3678999999999987 455553
No 137
>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1
Probab=36.37 E-value=31 Score=20.71 Aligned_cols=21 Identities=24% Similarity=0.540 Sum_probs=16.6
Q ss_pred CCCCCCCCCeeEEeecc-ceec
Q 032316 78 PPIGPKRGAKVKILRRE-SYWY 98 (143)
Q Consensus 78 p~igp~RGskVrIlR~E-SYWy 98 (143)
-.+..++|+.|.|+++. .-|+
T Consensus 17 ~eLs~~~Gd~i~v~~~~~~~Ww 38 (67)
T 1gl5_A 17 HDLRLERGQEYIILEKNDLHWW 38 (67)
T ss_dssp SBCCBCTTCEEEEEECSSSSEE
T ss_pred CeecCCcCCEEEEEEccCCCcE
Confidence 36789999999999984 4555
No 138
>1x2q_A Signal transducing adapter molecule 2; SH3 domain, signal transducing adaptor molecule, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=36.29 E-value=32 Score=21.89 Aligned_cols=21 Identities=19% Similarity=0.551 Sum_probs=16.5
Q ss_pred CCCCCCCCeeEEeec-cceecc
Q 032316 79 PIGPKRGAKVKILRR-ESYWYN 99 (143)
Q Consensus 79 ~igp~RGskVrIlR~-ESYWyn 99 (143)
....++|+.|.|+.+ +.-|+.
T Consensus 33 eLsf~~Gd~i~v~~~~~~~Ww~ 54 (88)
T 1x2q_A 33 ELTFKHGEIIIVLDDSDANWWK 54 (88)
T ss_dssp CCCCCSSCEEEEEECSCSSSEE
T ss_pred ccCCCCCCEEEEEEeCCCCEEE
Confidence 578999999999987 345553
No 139
>2dl8_A SLIT-ROBO RHO GTPase-activating protein 2; SH3 domain, formin-binding protein 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=36.19 E-value=27 Score=21.37 Aligned_cols=21 Identities=24% Similarity=0.602 Sum_probs=16.2
Q ss_pred CCCCCCCCCeeEEeec-cceec
Q 032316 78 PPIGPKRGAKVKILRR-ESYWY 98 (143)
Q Consensus 78 p~igp~RGskVrIlR~-ESYWy 98 (143)
.....++|+.|.|+.+ +.-|+
T Consensus 24 ~eLs~~~Gd~i~v~~~~~~~Ww 45 (72)
T 2dl8_A 24 RELSFKKGASLLLYQRASDDWW 45 (72)
T ss_dssp SBCCBCTTCEEEEEEEEETTEE
T ss_pred CEeccCCCCEEEEEeecCCCEE
Confidence 3578999999999987 34454
No 140
>2bc3_A Streptavidin; T7 TAG, biotin binding protein; 1.54A {Streptomyces avidinii} SCOP: b.61.1.1 PDB: 2wpu_A* 3pk2_A* 2qcb_A* 1stp_A*
Probab=35.95 E-value=24 Score=27.16 Aligned_cols=28 Identities=36% Similarity=0.707 Sum_probs=21.7
Q ss_pred cceeccccceEEEEcCCCC---------------CcccEEEEe
Q 032316 94 ESYWYNGIGSVVAVDQDPK---------------SRYPVVVRF 121 (143)
Q Consensus 94 ESYWyn~vGtVvsVDqs~g---------------irYPVvVRF 121 (143)
...||||.|+...|..+.. .-||++.++
T Consensus 18 ~GtW~NqlGS~MtI~~~~~G~itG~Y~Tavg~~gg~~~lsG~~ 60 (159)
T 2bc3_A 18 TGTWYNQLGSTFIVTAGADGALTGTYESAVGNAESRYVLTGRY 60 (159)
T ss_dssp SEEEECTTCCEEEEEECTTSEEEEEEEC--CCGGGEEEEEEEE
T ss_pred ceEEEcCCCCEEEEEECCCCEEEEEEeccccccCCccccceEe
Confidence 4689999999998876421 468888877
No 141
>2m0y_A Dedicator of cytokinesis protein 1; apoptosis; NMR {Mus musculus}
Probab=35.90 E-value=18 Score=22.00 Aligned_cols=22 Identities=27% Similarity=0.504 Sum_probs=18.3
Q ss_pred CCCCCCCCCeeEEeeccceecc
Q 032316 78 PPIGPKRGAKVKILRRESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~ESYWyn 99 (143)
.....++|+.|.|+.++.-|+.
T Consensus 26 ~eLs~~~Gd~i~v~~~~~~W~~ 47 (74)
T 2m0y_A 26 DELSLQIGDTVHILETYEGWYR 47 (74)
T ss_dssp SBCCEETTEEEEEEEBSSSCEE
T ss_pred CcccCCCCCEEEEEEcCCCeEE
Confidence 3578999999999999776774
No 142
>3ngp_A Spectrin alpha chain, brain; beta barrel, structural protein; 1.08A {Gallus gallus} PDB: 1e7o_A 1e6g_A 1e6h_A 1uue_A 1h8k_A 2lj3_A 1aey_A 1m8m_A 1shg_A 1u06_A 2nuz_A 2cdt_A 1hd3_A 2f2v_A 2f2w_A 2jm8_A 2jm9_A 2jma_A 3m0r_A 3m0p_A ...
Probab=35.76 E-value=35 Score=19.80 Aligned_cols=22 Identities=18% Similarity=0.511 Sum_probs=17.1
Q ss_pred CCCCCCCCCeeEEeecc-ceecc
Q 032316 78 PPIGPKRGAKVKILRRE-SYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~E-SYWyn 99 (143)
.....++|+.|.|+.+. .-|+.
T Consensus 21 ~eLs~~~Gd~i~v~~~~~~~Ww~ 43 (62)
T 3ngp_A 21 RELTVKKGDILTLLNSTNKDWWK 43 (62)
T ss_dssp TBCCBCTTCEEEEEECCSSSEEE
T ss_pred CCccCCCCCEEEEeEecCCCeEE
Confidence 36789999999999984 45554
No 143
>2csi_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.68 E-value=28 Score=21.57 Aligned_cols=23 Identities=9% Similarity=0.145 Sum_probs=17.2
Q ss_pred CCCCCCCCCCeeEEeecc--ceecc
Q 032316 77 PPPIGPKRGAKVKILRRE--SYWYN 99 (143)
Q Consensus 77 pp~igp~RGskVrIlR~E--SYWyn 99 (143)
+-....++|+.|.|+.+. .-|+.
T Consensus 28 ~~eLsf~~Gd~i~v~~~~~~~gWw~ 52 (76)
T 2csi_A 28 EAELTFCTGDIITVFGEIDEDGFYY 52 (76)
T ss_dssp TTSCCCCTTCEEEEESSCCSSSEEE
T ss_pred CCcccCCCCCEEEEeEecCCCCeEE
Confidence 346789999999999873 34554
No 144
>1aww_A ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linked agammaglobulinemia, XLA, BTK, SH3 domain, transferase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 1awx_A 1qly_A
Probab=35.49 E-value=25 Score=21.10 Aligned_cols=23 Identities=17% Similarity=0.423 Sum_probs=17.2
Q ss_pred CCCCCCCCCCeeEEeecc-ceecc
Q 032316 77 PPPIGPKRGAKVKILRRE-SYWYN 99 (143)
Q Consensus 77 pp~igp~RGskVrIlR~E-SYWyn 99 (143)
+..+..++|+.|.|+.++ .-|+.
T Consensus 22 ~~eLs~~~Gd~i~v~~~~~~~Ww~ 45 (67)
T 1aww_A 22 ANDLQLRKGDEYFILEESNLPWWR 45 (67)
T ss_dssp SSSCCCCSSCEEECCCCCSSSEEC
T ss_pred CCCccCCCCCEEEEEEccCCCcEE
Confidence 346889999999999874 45553
No 145
>1x2k_A OSTF1, osteoclast stimulating factor 1; SH3 domain, human osteoclast stimulating factor 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=35.48 E-value=35 Score=20.53 Aligned_cols=22 Identities=14% Similarity=0.353 Sum_probs=16.7
Q ss_pred CCCCCCCCCeeEEeec-cceecc
Q 032316 78 PPIGPKRGAKVKILRR-ESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~-ESYWyn 99 (143)
..+..++|+.|.|+.+ ++-|+.
T Consensus 22 ~eLs~~~Gd~i~v~~~~~~~Ww~ 44 (68)
T 1x2k_A 22 DELYFEEGDIIYITDMSDTNWWK 44 (68)
T ss_dssp TBCCCCSSCEEEEEECSCSSEEE
T ss_pred CcccCCCCCEEEEEEcCCCCEEE
Confidence 3678999999999976 345653
No 146
>1g5v_A SurviVal motor neuron protein 1; mRNA processing, translation; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=35.04 E-value=65 Score=21.97 Aligned_cols=40 Identities=18% Similarity=0.283 Sum_probs=28.7
Q ss_pred CCCCCCCCCCeeEEeec-cceeccccceEEEEcCCCCCcccEEEEe
Q 032316 77 PPPIGPKRGAKVKILRR-ESYWYNGIGSVVAVDQDPKSRYPVVVRF 121 (143)
Q Consensus 77 pp~igp~RGskVrIlR~-ESYWyn~vGtVvsVDqs~girYPVvVRF 121 (143)
+|...+++|+.+.-+-. .--||. ++|.+|+.+ +-. +.|+|
T Consensus 6 ~~~~~~kvGd~C~A~ys~Dg~wYr--A~I~~i~~~-~~~--~~V~f 46 (88)
T 1g5v_A 6 ASLQQWKVGDKCSAIWSEDGCIYP--ATIASIDFK-RET--CVVVY 46 (88)
T ss_dssp ---CCCCSSCEEEEECTTTCCEEE--EEEEEEETT-TTE--EEEEE
T ss_pred CccCCCCCCCEEEEEECCCCCEEE--EEEEEecCC-CCE--EEEEE
Confidence 34457899999998875 558997 689999875 223 57888
No 147
>2ege_A Uncharacterized protein KIAA1666; SH3 domain, KIAA1666 protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.72 E-value=26 Score=21.76 Aligned_cols=22 Identities=14% Similarity=0.264 Sum_probs=16.4
Q ss_pred CCCCCCCCCeeEEeec--cceecc
Q 032316 78 PPIGPKRGAKVKILRR--ESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~--ESYWyn 99 (143)
.....++|+.|+|+.+ +.-|+.
T Consensus 29 ~eLsf~~Gd~i~v~~~~~~~gWw~ 52 (75)
T 2ege_A 29 GRLALRAGDVVMVYGPMDDQGFYY 52 (75)
T ss_dssp CBCCBCTTCEEEEESCCCTTCEEE
T ss_pred CcceECCCCEEEEeEccCCCCEEE
Confidence 3577899999999963 555554
No 148
>3u23_A CD2-associated protein; structural genomics, structural genomics consortium, SGC, BE barrel, adaptor protein, protein binding; 1.11A {Homo sapiens} PDB: 2krn_A
Probab=34.59 E-value=32 Score=20.06 Aligned_cols=22 Identities=23% Similarity=0.430 Sum_probs=17.0
Q ss_pred CCCCCCCCCeeEEeec-cceecc
Q 032316 78 PPIGPKRGAKVKILRR-ESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~-ESYWyn 99 (143)
.....++|+.|.|+.+ ++-|+.
T Consensus 22 ~eLs~~~Gd~i~v~~~~~~~W~~ 44 (65)
T 3u23_A 22 DELELKVGDIIDINEEVEEGWWS 44 (65)
T ss_dssp TBCCBCTTCEEEEEEEEETTEEE
T ss_pred CCcCCCCCCEEEEEEecCCCEEE
Confidence 3578999999999987 355654
No 149
>2yup_A Vinexin; sorbin and SH3 domain-containing protein 3, SH3-containing adapter molecule 1, SCAM-1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=34.50 E-value=28 Score=22.27 Aligned_cols=22 Identities=18% Similarity=0.670 Sum_probs=16.8
Q ss_pred CCCCCCCCCCeeEEeec-cceec
Q 032316 77 PPPIGPKRGAKVKILRR-ESYWY 98 (143)
Q Consensus 77 pp~igp~RGskVrIlR~-ESYWy 98 (143)
+..+..++|+.|.|+.+ +.-|+
T Consensus 31 ~~eLsf~~Gd~i~v~~~~~~~Ww 53 (90)
T 2yup_A 31 EVELSFRKGEHICLIRKVNENWY 53 (90)
T ss_dssp SSBCCCCTTCEEEESSCCCSSEE
T ss_pred cCcCCCCCCCEEEEEEEcCCCeE
Confidence 34588999999999986 45554
No 150
>2dm1_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=34.49 E-value=26 Score=21.53 Aligned_cols=17 Identities=24% Similarity=0.376 Sum_probs=14.5
Q ss_pred CCCCCCCCCeeEEeecc
Q 032316 78 PPIGPKRGAKVKILRRE 94 (143)
Q Consensus 78 p~igp~RGskVrIlR~E 94 (143)
-....++|++|.|+.+.
T Consensus 22 ~eLs~~~Gd~i~v~~~~ 38 (73)
T 2dm1_A 22 RELSLREGDVVRIYSRI 38 (73)
T ss_dssp TBCCBCTTCEEECCBSS
T ss_pred CcCCCCCCCEEEEEEec
Confidence 36789999999999974
No 151
>1i1j_A Melanoma derived growth regulatory protein; SH3 subdomain, hormone/growth factor complex; 1.39A {Homo sapiens} SCOP: b.34.2.1 PDB: 1k0x_A 1hjd_A
Probab=34.41 E-value=30 Score=23.84 Aligned_cols=16 Identities=19% Similarity=0.279 Sum_probs=14.2
Q ss_pred CCCCCCCCCeeEEeec
Q 032316 78 PPIGPKRGAKVKILRR 93 (143)
Q Consensus 78 p~igp~RGskVrIlR~ 93 (143)
-....++|+.|.|+++
T Consensus 37 ~ELsf~~GDiI~Vl~k 52 (108)
T 1i1j_A 37 RFLTIHRGQVVYVFSK 52 (108)
T ss_dssp TBCCBCTTCEEEEEEE
T ss_pred CccccCCCCEEEEEEe
Confidence 3578999999999998
No 152
>2f01_A Streptavidin; protein/ligand interactions, biotin, biotin BI protein; HET: BTN BTQ; 0.85A {Streptomyces avidinii} SCOP: b.61.1.1 PDB: 1swa_A 1swb_A 1swc_A 1swd_A* 1swe_A* 1mk5_A* 2g5l_A* 2gh7_A* 3ry1_A* 3ry2_A* 1i9h_A* 1hqq_A 1hxl_A 1hxz_A 1hy2_A 3t6f_A* 3t6l_A 1swu_A 1ndj_A 1rst_B ...
Probab=34.02 E-value=29 Score=25.43 Aligned_cols=28 Identities=36% Similarity=0.716 Sum_probs=21.6
Q ss_pred cceeccccceEEEEcCCC---------------CCcccEEEEe
Q 032316 94 ESYWYNGIGSVVAVDQDP---------------KSRYPVVVRF 121 (143)
Q Consensus 94 ESYWyn~vGtVvsVDqs~---------------girYPVvVRF 121 (143)
...||||.|++..|.++. +.-||++.++
T Consensus 6 ~GtW~NqlGS~m~I~~~~~G~i~G~Y~Tav~~~~~~~~~sG~~ 48 (127)
T 2f01_A 6 TGTWYNQLGSTFIVTAGADGALTGTYESAVGNAESRYVLTGRY 48 (127)
T ss_dssp CEEEEETTCCEEEEEECTTSEEEEEEECSSSSCCSCEEEEEEE
T ss_pred cEEEEeCCCCEEEEEECCCCEEEEEEecccccCCCcccceeEE
Confidence 467999999998887642 2468998887
No 153
>2ebp_A SAM and SH3 domain-containing protein 1; proline-glutamate repeat-containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2kea_A
Probab=33.88 E-value=32 Score=21.40 Aligned_cols=22 Identities=14% Similarity=0.223 Sum_probs=17.0
Q ss_pred CCCCCCCCCeeEEeec-cceecc
Q 032316 78 PPIGPKRGAKVKILRR-ESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~-ESYWyn 99 (143)
-....++|+.|.|+++ +.-|+.
T Consensus 26 ~eLs~~~Gd~i~v~~~~~~gWw~ 48 (73)
T 2ebp_A 26 DSLKLKKGDIIDIISKPPMGTWM 48 (73)
T ss_dssp SBCCBCSSCEEEEEECCSSSCEE
T ss_pred CccCCCCCCEEEEEEeCCCCeEE
Confidence 3678999999999987 455553
No 154
>3rnj_A Brain-specific angiogenesis inhibitor 1-associate 2; structural genomics, structural genomics consortium, SGC, BE barrel; HET: EDT; 1.50A {Homo sapiens} SCOP: b.34.2.1
Probab=32.53 E-value=35 Score=20.39 Aligned_cols=20 Identities=20% Similarity=0.365 Sum_probs=15.4
Q ss_pred CCCCCCCeeEEeec--cceecc
Q 032316 80 IGPKRGAKVKILRR--ESYWYN 99 (143)
Q Consensus 80 igp~RGskVrIlR~--ESYWyn 99 (143)
...++|+.+.|+++ ++-|+.
T Consensus 25 Lsf~~Gd~i~v~~~~~~~gW~~ 46 (67)
T 3rnj_A 25 LSFKEGDLITLLVPEARDGWHY 46 (67)
T ss_dssp CCBCTTCEEEECSSSCBTTEEE
T ss_pred ccCCCCCEEEEeeccCCCCCEE
Confidence 78999999999964 445553
No 155
>4d8k_A Tyrosine-protein kinase LCK; protein kinases, SH2 domain, SH3 domain, structural genomics center for structural genomics, JCSG; 2.36A {Homo sapiens} PDB: 1lck_A* 1x27_A*
Probab=32.48 E-value=34 Score=24.18 Aligned_cols=22 Identities=23% Similarity=0.708 Sum_probs=18.8
Q ss_pred CCCCCCCCCeeEEeeccceecc
Q 032316 78 PPIGPKRGAKVKILRRESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~ESYWyn 99 (143)
-....++|+.++|+.++.-|+.
T Consensus 27 ~eLs~~~Gd~i~v~~~~~~Ww~ 48 (175)
T 4d8k_A 27 GDLGFEKGEQLRILEQSGEWWK 48 (175)
T ss_dssp SBCCBCTTCEEEEEECCSSEEE
T ss_pred cccccccCCEEEEEccCCCEEE
Confidence 4678999999999999887875
No 156
>2eqi_A Phospholipase C, gamma 2; SH3 domain, PLCG2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=31.86 E-value=31 Score=20.78 Aligned_cols=21 Identities=19% Similarity=0.396 Sum_probs=16.1
Q ss_pred CCCCCCCCCeeEEeec-cceec
Q 032316 78 PPIGPKRGAKVKILRR-ESYWY 98 (143)
Q Consensus 78 p~igp~RGskVrIlR~-ESYWy 98 (143)
.....++|+.|.|+.+ +.-|+
T Consensus 22 ~eLs~~~Gd~i~v~~~~~~~Ww 43 (69)
T 2eqi_A 22 DELTFCRGALIHNVSKEPGGWW 43 (69)
T ss_dssp SCCCBCTTCEEESCCCCSSSCE
T ss_pred CccCCCCCCEEEEEEcCCCCeE
Confidence 3678999999999965 44554
No 157
>2epd_A RHO GTPase-activating protein 4; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.45 E-value=23 Score=22.02 Aligned_cols=20 Identities=25% Similarity=0.655 Sum_probs=16.0
Q ss_pred CCCCCCCCeeEEeec-cceec
Q 032316 79 PIGPKRGAKVKILRR-ESYWY 98 (143)
Q Consensus 79 ~igp~RGskVrIlR~-ESYWy 98 (143)
....++|+.|.|+++ +.-|+
T Consensus 26 eLs~~~Gd~i~v~~~~~~~Ww 46 (76)
T 2epd_A 26 ELSFRRGDVLRLHERASSDWW 46 (76)
T ss_dssp BCEECTTCEEEEEEEEETTEE
T ss_pred ccCCCCCCEEEEEEeCCCCEE
Confidence 577899999999997 45555
No 158
>2kt8_A Probable surface protein; SH3 family, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Clostridium perfringens} PDB: 2kyb_A
Probab=31.34 E-value=20 Score=23.09 Aligned_cols=19 Identities=26% Similarity=0.424 Sum_probs=16.0
Q ss_pred CCCCCCeeEEeeccceecc
Q 032316 81 GPKRGAKVKILRRESYWYN 99 (143)
Q Consensus 81 gp~RGskVrIlR~ESYWyn 99 (143)
.+.+|++|+|+.++.-||+
T Consensus 28 ~l~~G~~v~vl~~~~~W~k 46 (76)
T 2kt8_A 28 SLSGNTKVTIVGEEGAFYK 46 (76)
T ss_dssp EECTTCEEEEEEEETTEEE
T ss_pred EECCCCEEEEEEEeCCEEE
Confidence 3568999999998888886
No 159
>2yrv_A AT-rich interactive domain-containing protein 4A; ARID domain-containing protein 4A, retinoblastoma-binding protein 1, RBBP-1, structural genomics; NMR {Homo sapiens}
Probab=31.27 E-value=26 Score=26.10 Aligned_cols=23 Identities=30% Similarity=0.455 Sum_probs=17.7
Q ss_pred cceEEEEcCCC--CCcccEEEEeee
Q 032316 101 IGSVVAVDQDP--KSRYPVVVRFNK 123 (143)
Q Consensus 101 vGtVvsVDqs~--girYPVvVRF~k 123 (143)
+|+||+|+.++ +.=||.+|-=..
T Consensus 13 lGkVV~V~~~~kk~~WfPALVVsPs 37 (117)
T 2yrv_A 13 LGKVVSVVSATERTEWYPALVISPS 37 (117)
T ss_dssp TTSEEEEECSSCSSCEEEEEEECCS
T ss_pred cCcEEEEecCCCCCceeeeEEECCC
Confidence 89999999874 355999985443
No 160
>2v1r_A Peroxisomal membrane protein PAS20; protein transport, translocation, transmembrane, peptide COM structural genomics, peroxisome; 2.1A {Saccharomyces cerevisiae} SCOP: b.34.2.1
Probab=30.99 E-value=39 Score=20.79 Aligned_cols=16 Identities=25% Similarity=0.497 Sum_probs=14.4
Q ss_pred CCCCCCCCeeEEeecc
Q 032316 79 PIGPKRGAKVKILRRE 94 (143)
Q Consensus 79 ~igp~RGskVrIlR~E 94 (143)
....++|+.|.|+++.
T Consensus 31 eLs~~~Gd~i~v~~~~ 46 (80)
T 2v1r_A 31 EVALKKGDLMAILSKK 46 (80)
T ss_dssp BCCBCTTCEEEEEEEE
T ss_pred EecCCCCCEEEEEECC
Confidence 6789999999999986
No 161
>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein; 2.00A {Caenorhabditis elegans} SCOP: b.34.2.1 PDB: 2sem_A 3sem_A 1k76_A 1kfz_A
Probab=30.92 E-value=47 Score=19.11 Aligned_cols=21 Identities=19% Similarity=0.662 Sum_probs=16.2
Q ss_pred CCCCCCCCCeeEEeecc-ceec
Q 032316 78 PPIGPKRGAKVKILRRE-SYWY 98 (143)
Q Consensus 78 p~igp~RGskVrIlR~E-SYWy 98 (143)
-....++|+.|.|+.+. +-|+
T Consensus 17 ~eLs~~~Gd~i~v~~~~~~~Ww 38 (58)
T 1sem_A 17 GELAFKRGDVITLINKDDPNWW 38 (58)
T ss_dssp TBCCBCTTCEEEEEECSSSSEE
T ss_pred CCcCCCCCCEEEEEEecCCCEE
Confidence 36789999999999974 3454
No 162
>4hcz_A PHD finger protein 1; protein-peptide complex, tudor, histone binding, H3K36ME3, N nucleus, transcription; HET: M3L; 1.85A {Homo sapiens}
Probab=30.89 E-value=30 Score=23.15 Aligned_cols=38 Identities=21% Similarity=0.379 Sum_probs=25.8
Q ss_pred CCCCCCeeEEeeccceeccccceEEEEcCCCCCcccEEEEeee
Q 032316 81 GPKRGAKVKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNK 123 (143)
Q Consensus 81 gp~RGskVrIlR~ESYWyn~vGtVvsVDqs~girYPVvVRF~k 123 (143)
+...|+.|-+.-..--.| .|||..||+. +-. .+|||+.
T Consensus 3 ~f~~GedVLarwsDG~fY--lGtI~~V~~~-~~~--clV~F~D 40 (58)
T 4hcz_A 3 RLWEGQDVLARWTDGLLY--LGTIKKVDSA-REV--CLVQFED 40 (58)
T ss_dssp SCCTTCEEEEECTTSCEE--EEEEEEEETT-TTE--EEEEETT
T ss_pred ccccCCEEEEEecCCCEE--eEEEEEEecC-CCE--EEEEEcC
Confidence 456677777654443333 6999999997 334 5889975
No 163
>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3, signaling protein; NMR {Homo sapiens}
Probab=30.68 E-value=27 Score=21.17 Aligned_cols=21 Identities=19% Similarity=0.197 Sum_probs=16.3
Q ss_pred CCCCCCCCeeEEeec-cceecc
Q 032316 79 PIGPKRGAKVKILRR-ESYWYN 99 (143)
Q Consensus 79 ~igp~RGskVrIlR~-ESYWyn 99 (143)
....++|+.|.|+++ ++-|+.
T Consensus 24 eLs~~~Gd~i~v~~~~~~gWw~ 45 (67)
T 2eyx_A 24 ALALEVGELVKVTKINVSGQWE 45 (67)
T ss_dssp BCCBCSSEEEEEEEECTTSEEE
T ss_pred ccccCCCCEEEEEEecCCCEEE
Confidence 677899999999987 445553
No 164
>3r8s_U 50S ribosomal protein L24; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 2j28_U* 3fik_U 3j19_U 2wwq_U 3oat_U* 3oas_U* 3ofd_U 3ofc_U 3ofr_U* 3ofz_U* 3og0_U 3ofq_U 3r8t_U 3i1n_U 1vs8_U 1vs6_U 1vt2_U 3i1p_U 3i1r_U 3i1t_U ...
Probab=30.66 E-value=40 Score=23.92 Aligned_cols=27 Identities=22% Similarity=0.220 Sum_probs=22.3
Q ss_pred CCCCCeeEEeeccceeccccceEEEEcCC
Q 032316 82 PKRGAKVKILRRESYWYNGIGSVVAVDQD 110 (143)
Q Consensus 82 p~RGskVrIlR~ESYWyn~vGtVvsVDqs 110 (143)
+++||.|.|++-.. -...|+|..|+..
T Consensus 4 IkkGD~V~Vi~Gkd--KGk~GkV~~V~~~ 30 (102)
T 3r8s_U 4 IRRDDEVIVLTGKD--KGKRGKVKNVLSS 30 (102)
T ss_dssp SCSSCEEEECSSSS--TTCEEEEEEEETT
T ss_pred ccCCCEEEEeEcCC--CCeeeEEEEEEeC
Confidence 78999999998752 3567999999985
No 165
>2j05_A RAS GTPase-activating protein 1; GTPase activation, SH3 domain, SH2 domain, SRC homology 3, RAS signaling pathway, proto- oncogene, phosphorylation; 1.5A {Homo sapiens} PDB: 2j06_A
Probab=30.61 E-value=44 Score=19.89 Aligned_cols=22 Identities=18% Similarity=0.234 Sum_probs=16.7
Q ss_pred CCCCCCCCCeeEEeec-cceecc
Q 032316 78 PPIGPKRGAKVKILRR-ESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~-ESYWyn 99 (143)
.....++|+.+.|+.+ ++-|+.
T Consensus 21 ~eLs~~~Gd~i~v~~~~~~gW~~ 43 (65)
T 2j05_A 21 DEISFLKGDMFIVHNELEDGWMW 43 (65)
T ss_dssp SBCCBCTTCEEEEEEECTTSEEE
T ss_pred CcCcCCCCCEEEEeEecCCCEEE
Confidence 3578899999999986 455553
No 166
>1tg0_A BBC1 protein, myosin tail region-interacting protein MTI1; yeast, SH3 domain, structural genomics, contractIle protein; 0.97A {Saccharomyces cerevisiae} PDB: 1zuk_A 1wdx_A
Probab=30.48 E-value=47 Score=19.95 Aligned_cols=23 Identities=9% Similarity=0.336 Sum_probs=17.0
Q ss_pred CCCCCCCCCCeeEEeec-cceecc
Q 032316 77 PPPIGPKRGAKVKILRR-ESYWYN 99 (143)
Q Consensus 77 pp~igp~RGskVrIlR~-ESYWyn 99 (143)
+.....++|+.|.|+.+ ++-|+.
T Consensus 21 ~~eLsf~~Gd~i~v~~~~~~~Ww~ 44 (68)
T 1tg0_A 21 EDDLNFEKDQEIIVTSVEDAEWYF 44 (68)
T ss_dssp TTBCCBCTTCEEEEEEECSSSEEE
T ss_pred cCCCCCCCCCEEEEEEecCCCeEE
Confidence 34678999999999985 345553
No 167
>3szh_A Avidin/streptavidin; high affinity systems, biotin, shwanav biotin-binding protein; 1.07A {Shewanella denitrificans} PDB: 3szi_A 3szj_A* 3t2x_A 3t2w_A
Probab=30.30 E-value=20 Score=26.65 Aligned_cols=16 Identities=31% Similarity=0.484 Sum_probs=13.3
Q ss_pred ccceeccccceEEEEc
Q 032316 93 RESYWYNGIGSVVAVD 108 (143)
Q Consensus 93 ~ESYWyn~vGtVvsVD 108 (143)
--|.|+||.|++..|.
T Consensus 9 ~~~tW~NqlGS~m~I~ 24 (122)
T 3szh_A 9 AMSAWVNQDGSTLYIN 24 (122)
T ss_dssp SSEEEECTTSCEEEEE
T ss_pred CCceeEccCCCEEEEE
Confidence 3489999999988776
No 168
>2ckk_A KIN17; beta barrel, ribosomal protein, ribonucleoprotein, nuclear protein; 1.45A {Homo sapiens}
Probab=30.26 E-value=95 Score=22.31 Aligned_cols=39 Identities=23% Similarity=0.271 Sum_probs=30.5
Q ss_pred CCCCCCCCeeEEeecc---ceeccccceEEEEcCCCCCcccEEEEee
Q 032316 79 PIGPKRGAKVKILRRE---SYWYNGIGSVVAVDQDPKSRYPVVVRFN 122 (143)
Q Consensus 79 ~igp~RGskVrIlR~E---SYWyn~vGtVvsVDqs~girYPVvVRF~ 122 (143)
+.=+.+|=.|||..+. . +|++.|.|.+| .+ .|-..|++.
T Consensus 12 ~~Wl~~~I~Vrii~k~~~~g-~y~~KgvV~~V-~~---~~~c~V~l~ 53 (127)
T 2ckk_A 12 DYWLQPEIIVKIITKKLGEK-YHKKKAIVKEV-ID---KYTAVVKMI 53 (127)
T ss_dssp SCCCCTTBEEEECCSTTCGG-GTTCEEEEEEE-ET---TTEEEEEET
T ss_pred CCcccCCeEEEEEEccCCCc-ccCceEEEEEe-cC---CCeEEEEEC
Confidence 4456789999999873 4 99999999999 33 377888883
No 169
>2l0a_A STAM-1, signal transducing adapter molecule 1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=29.76 E-value=37 Score=21.47 Aligned_cols=22 Identities=18% Similarity=0.517 Sum_probs=16.7
Q ss_pred CCCCCCCCCeeEEeec-cceecc
Q 032316 78 PPIGPKRGAKVKILRR-ESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~-ESYWyn 99 (143)
.....++|+.|.|+.+ +.-|+.
T Consensus 32 ~eLsf~~Gd~i~Vl~~~~~gWw~ 54 (72)
T 2l0a_A 32 NELTFKAGEIITVLDDSDPNWWK 54 (72)
T ss_dssp TBCCBCTTCEEEEEEEEETTEEE
T ss_pred CccCCCCCCEEEEEEecCCCEEE
Confidence 3678999999999986 345553
No 170
>2d8h_A SH3YL1 protein; SH3 domain, hypothetical protein SH3YL1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.54 E-value=30 Score=21.54 Aligned_cols=17 Identities=6% Similarity=0.364 Sum_probs=14.6
Q ss_pred CCCCCCCCCeeEEeecc
Q 032316 78 PPIGPKRGAKVKILRRE 94 (143)
Q Consensus 78 p~igp~RGskVrIlR~E 94 (143)
.....++|+.|.|+.+.
T Consensus 32 ~eLsf~~Gd~i~v~~~~ 48 (80)
T 2d8h_A 32 GDLNFQAGDRITVISKT 48 (80)
T ss_dssp TBCEECTTCEEEEEECC
T ss_pred CeeeEcCCCEEEEeECc
Confidence 36788999999999985
No 171
>2pqh_A Spectrin alpha chain, brain; SH3 domain, chimera, , structural protein; 1.75A {Gallus gallus}
Probab=29.50 E-value=44 Score=20.84 Aligned_cols=20 Identities=20% Similarity=0.576 Sum_probs=15.7
Q ss_pred CCCCCCCCeeEEeec-cceec
Q 032316 79 PIGPKRGAKVKILRR-ESYWY 98 (143)
Q Consensus 79 ~igp~RGskVrIlR~-ESYWy 98 (143)
.+..++|+.|.|+.+ ++=|+
T Consensus 18 eLs~~~Gd~i~v~~~~~~~Ww 38 (80)
T 2pqh_A 18 EVTMKKGDILTLLNSTNKDWW 38 (80)
T ss_dssp BCCBCTTCEEEEEECCSSSEE
T ss_pred ccCCCCCCEEEEEEecCCCEE
Confidence 678899999999997 33344
No 172
>1ugv_A KIAA0621, olygophrenin-1 like protein; beta barrel, GRAF protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=29.44 E-value=28 Score=21.35 Aligned_cols=22 Identities=14% Similarity=0.285 Sum_probs=16.8
Q ss_pred CCCCCCCCCeeEEeec--cceecc
Q 032316 78 PPIGPKRGAKVKILRR--ESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~--ESYWyn 99 (143)
.....++|+.|.|+.+ +.-|+.
T Consensus 25 ~eLsf~~Gd~i~v~~~~~~~~Ww~ 48 (72)
T 1ugv_A 25 SELSFTAGTVFDNVHPSQEPGWLE 48 (72)
T ss_dssp SBCCBCTTCEEBSCCBCSSTTEEE
T ss_pred CEeCCcCCCEEEEEEecCCCCeEE
Confidence 3578999999999874 556664
No 173
>2rqr_A CED-12 homolog, engulfment and cell motility protein 1, linker, D of cytokinesis protein 2; KIAA0209, KIAA0281, apoptosis, membrane, phagocytosis; NMR {Homo sapiens}
Probab=29.32 E-value=38 Score=23.30 Aligned_cols=23 Identities=26% Similarity=0.550 Sum_probs=18.6
Q ss_pred CCCCCCCCCCeeEEeeccceecc
Q 032316 77 PPPIGPKRGAKVKILRRESYWYN 99 (143)
Q Consensus 77 pp~igp~RGskVrIlR~ESYWyn 99 (143)
+.....++|+.|.|++++.=|+.
T Consensus 73 ~~eLsf~~Gd~i~vl~~~~gWw~ 95 (119)
T 2rqr_A 73 APQLSLQIGDVVRIQETCGDWYR 95 (119)
T ss_dssp TTBCCBCTTCEEEEEEEETTEEE
T ss_pred CCcccCcCCCEEEEEEcCCCEEE
Confidence 34577899999999998777764
No 174
>3e4w_A Putative uncharacterized protein; heme enzyme, catalase, peroxidase, oxidoreductase; HET: HEM; 1.80A {Mycobacterium avium subsp} PDB: 3e4y_A*
Probab=29.22 E-value=21 Score=29.34 Aligned_cols=14 Identities=29% Similarity=0.558 Sum_probs=12.1
Q ss_pred CCcccEEEEeeeee
Q 032316 112 KSRYPVVVRFNKVN 125 (143)
Q Consensus 112 girYPVvVRF~kVN 125 (143)
|-+|||+|||..+.
T Consensus 62 g~~tpv~vRFSt~~ 75 (320)
T 3e4w_A 62 GSTVPALIRFSNGS 75 (320)
T ss_dssp SCEEEEEEEEEESS
T ss_pred CceeEEEEEeccCC
Confidence 67999999999873
No 175
>2fpe_A C-JUN-amino-terminal kinase interacting protein 1; SRC-homology 3 (SH3) domain, all beta structure, signaling protein; HET: P6G; 1.75A {Rattus norvegicus} PDB: 2fpd_A*
Probab=29.09 E-value=50 Score=19.41 Aligned_cols=22 Identities=18% Similarity=0.471 Sum_probs=16.7
Q ss_pred CCCCCCCCCeeEEeec-cceecc
Q 032316 78 PPIGPKRGAKVKILRR-ESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~-ESYWyn 99 (143)
.....++|+.|.|+.+ ++-|+.
T Consensus 18 ~eLs~~~Gd~i~v~~~~~~~W~~ 40 (62)
T 2fpe_A 18 DELELEVDDPLLVELQAEDYWYE 40 (62)
T ss_dssp TBCCBCTTCEEEEEEECTTSEEE
T ss_pred CcCcCCCCCEEEEEEecCCCEEE
Confidence 3578899999999875 456664
No 176
>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding, cell adhesion, cytoskeleton, LIPO magnesium, manganese, metal-binding, myristate; 1.40A {Homo sapiens} PDB: 3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A 1bbz_A 1awo_A
Probab=29.04 E-value=51 Score=19.11 Aligned_cols=20 Identities=20% Similarity=0.574 Sum_probs=15.6
Q ss_pred CCCCCCCCeeEEeecc--ceec
Q 032316 79 PIGPKRGAKVKILRRE--SYWY 98 (143)
Q Consensus 79 ~igp~RGskVrIlR~E--SYWy 98 (143)
....++|+.|.|+.++ .-|+
T Consensus 21 eLs~~~Gd~i~v~~~~~~~~W~ 42 (63)
T 3eg3_A 21 TLSITKGEKLRVLGYNHNGEWC 42 (63)
T ss_dssp BCCBCTTCEEEEEEECTTSSEE
T ss_pred ccCCCCCCEEEEEEeCCCCCeE
Confidence 5789999999999853 4455
No 177
>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel, ATP-binding, developmental protein, lipoprotein, manganese, metal-binding; 1.60A {Gallus gallus} PDB: 2l2p_A
Probab=28.99 E-value=45 Score=21.05 Aligned_cols=21 Identities=29% Similarity=0.640 Sum_probs=16.3
Q ss_pred CCCCCCCCCeeEEeec-cceec
Q 032316 78 PPIGPKRGAKVKILRR-ESYWY 98 (143)
Q Consensus 78 p~igp~RGskVrIlR~-ESYWy 98 (143)
-....++|+.|.|+.+ +.-|+
T Consensus 20 ~eLs~~~Gd~i~vl~~~~~~Ww 41 (79)
T 3cqt_A 20 DDLSFHKGEKFQILNSSEGDWW 41 (79)
T ss_dssp TBCCBCTTCEEEEEECTTSSEE
T ss_pred CcCCCCCCCEEEEEEecCCCeE
Confidence 3678999999999975 35565
No 178
>2e5k_A Suppressor of T-cell receptor signaling 1; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.79 E-value=41 Score=21.54 Aligned_cols=15 Identities=7% Similarity=-0.060 Sum_probs=13.6
Q ss_pred CCCCCCCCeeEEeec
Q 032316 79 PIGPKRGAKVKILRR 93 (143)
Q Consensus 79 ~igp~RGskVrIlR~ 93 (143)
....++|+.|.|+.+
T Consensus 32 eLs~~~Gd~i~v~~~ 46 (94)
T 2e5k_A 32 ELELVPGDFIFMSPM 46 (94)
T ss_dssp BCCBCTTCEEEECGG
T ss_pred CcCCCCCCEEEEEEC
Confidence 578999999999998
No 179
>1jqq_A PEX13P, peroxisomal membrane protein PAS20, PAS20P, roxin-13; compact beta-barrel of five anti-parrallel beta-strands; 2.65A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1n5z_A
Probab=28.47 E-value=44 Score=21.23 Aligned_cols=17 Identities=24% Similarity=0.477 Sum_probs=14.7
Q ss_pred CCCCCCCCeeEEeeccc
Q 032316 79 PIGPKRGAKVKILRRES 95 (143)
Q Consensus 79 ~igp~RGskVrIlR~ES 95 (143)
....++|+.|.|+.+..
T Consensus 31 eLsf~~Gd~i~v~~~~~ 47 (92)
T 1jqq_A 31 EVALKKGDLMAILSKKD 47 (92)
T ss_dssp BCCBCTTCEEEEEEEEC
T ss_pred CcCCCCCCEEEEEECCC
Confidence 67899999999999863
No 180
>1d1n_A Initiation factor 2; beta-barrel, gene regulation; NMR {Geobacillus stearothermophilus} SCOP: b.43.3.1
Probab=28.37 E-value=25 Score=25.05 Aligned_cols=24 Identities=25% Similarity=0.512 Sum_probs=17.3
Q ss_pred CCCCCeeEEeeccceeccccceEEEE
Q 032316 82 PKRGAKVKILRRESYWYNGIGSVVAV 107 (143)
Q Consensus 82 p~RGskVrIlR~ESYWyn~vGtVvsV 107 (143)
++|+++||++|.---=|. |++.|.
T Consensus 33 i~r~~~vRv~Rd~~vI~e--G~i~SL 56 (99)
T 1d1n_A 33 ITRDSKVRLIRQGIVVYE--GEIDSL 56 (99)
T ss_dssp CCSSSEEEEECSSSEEEE--EECSEE
T ss_pred EEcCCeEEEEECCEEEEE--eEEhhh
Confidence 789999999998655443 455554
No 181
>1neg_A Spectrin alpha chain, brain; SH3-domain fold, five antiparallel beta sheets, structural protein; 2.30A {Gallus gallus} SCOP: b.34.2.1
Probab=28.36 E-value=45 Score=21.61 Aligned_cols=22 Identities=18% Similarity=0.522 Sum_probs=17.0
Q ss_pred CCCCCCCCCeeEEeec-cceecc
Q 032316 78 PPIGPKRGAKVKILRR-ESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~-ESYWyn 99 (143)
..+..++|+.|.|+.+ +.-|+.
T Consensus 32 ~eLsf~~Gd~i~Vl~~~~~gWw~ 54 (83)
T 1neg_A 32 REVTMKKGDILTLLNSTNKDWWK 54 (83)
T ss_dssp TBCCBCTTCEEEEEECCSSSEEE
T ss_pred CccccCCCCEEEEEEecCCCEEE
Confidence 3678999999999996 445553
No 182
>3h6z_A Polycomb protein SFMBT; MBT, MBR repeat, aromatic CAGE, chromatin regulator, DNA-BIN metal-binding, nucleus, repressor, transcription; HET: MLZ SUC; 2.80A {Drosophila melanogaster}
Probab=28.28 E-value=38 Score=29.18 Aligned_cols=37 Identities=19% Similarity=0.320 Sum_probs=27.3
Q ss_pred CCCCCCCCeeEEe--------------eccceeccccceEEEEcCCCCCcccEEEEeee
Q 032316 79 PIGPKRGAKVKIL--------------RRESYWYNGIGSVVAVDQDPKSRYPVVVRFNK 123 (143)
Q Consensus 79 ~igp~RGskVrIl--------------R~ESYWyn~vGtVvsVDqs~girYPVvVRF~k 123 (143)
.-+++.|.||.+. .+.+|| |++|.+--| |=+.+||+.
T Consensus 34 ~~~~~~GMklEv~~~~~~~~~~~~~~~~p~~~W------vAtV~~~~G--~rLlLry~G 84 (447)
T 3h6z_A 34 WDNLGVGMKVEVENTDCDSIEVIQPGQTPTSFW------VATILEIKG--YKALMSYEG 84 (447)
T ss_dssp HTTCCTTCEEEEC----------------CCBE------EEEEEEEET--TEEEEEETT
T ss_pred hhhcCCCCEEEEecCCcccccccccccCCCcEE------EEEEhhhcc--cEEEEEEcc
Confidence 4689999999985 356899 677777534 558999874
No 183
>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel, transferase; HET: PG4; 1.76A {Homo sapiens} SCOP: b.34.2.1 PDB: 3h0i_A 3h0f_A*
Probab=28.20 E-value=53 Score=19.76 Aligned_cols=21 Identities=24% Similarity=0.612 Sum_probs=16.3
Q ss_pred CCCCCCCCeeEEeecc-ceecc
Q 032316 79 PIGPKRGAKVKILRRE-SYWYN 99 (143)
Q Consensus 79 ~igp~RGskVrIlR~E-SYWyn 99 (143)
....++|+.|.|+.++ .-|+.
T Consensus 31 eLs~~~Gd~i~v~~~~~~~Ww~ 52 (73)
T 3h0h_A 31 DLSFHKGEKFQILNSSEGDWWE 52 (73)
T ss_dssp BCCBCTTCEEEEEECSSSSEEE
T ss_pred cceEeCCCEEEEEEecCCCeEE
Confidence 6789999999999863 45553
No 184
>2ed0_A ABL interactor 2; coiled coil, cytoskeleton, nuclear protein, phosphorylation, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.17 E-value=48 Score=20.57 Aligned_cols=21 Identities=19% Similarity=0.643 Sum_probs=16.3
Q ss_pred CCCCCCCCCeeEEeec-cceec
Q 032316 78 PPIGPKRGAKVKILRR-ESYWY 98 (143)
Q Consensus 78 p~igp~RGskVrIlR~-ESYWy 98 (143)
-....++|+.|.|+.+ +.-|+
T Consensus 32 ~eLsf~~Gd~i~v~~~~~~gWw 53 (78)
T 2ed0_A 32 DELSFQEGAIIYVIKKNDDGWY 53 (78)
T ss_dssp TBCCBCSSCEEEEEEECSSSEE
T ss_pred CcccccCCCEEEEEEeCCCCEE
Confidence 3678999999999987 34455
No 185
>2krs_A Probable enterotoxin; all beta, SH3, ENTD, CPF_0587, CPE0606, structural genomics, PSI-2, protein structure initiative; NMR {Clostridium perfringens}
Probab=27.94 E-value=19 Score=22.81 Aligned_cols=19 Identities=26% Similarity=0.613 Sum_probs=15.8
Q ss_pred CCCCCCeeEEeeccceecc
Q 032316 81 GPKRGAKVKILRRESYWYN 99 (143)
Q Consensus 81 gp~RGskVrIlR~ESYWyn 99 (143)
.+.+|++|+|+....=||+
T Consensus 26 ~l~~G~~v~v~~~~~~W~k 44 (74)
T 2krs_A 26 TLRNNDKVEIIKEVDGWYE 44 (74)
T ss_dssp EEETTCEEEEEEEETTEEE
T ss_pred EECCCCEEEEEEEeCCEEE
Confidence 3678999999998888885
No 186
>1yn8_A NBP2, NAP1-binding protein 2; SH3 domain, unknown function; 1.70A {Saccharomyces cerevisiae}
Probab=27.50 E-value=50 Score=18.99 Aligned_cols=19 Identities=16% Similarity=0.095 Sum_probs=15.1
Q ss_pred CCCCCCCCCCeeEEeeccc
Q 032316 77 PPPIGPKRGAKVKILRRES 95 (143)
Q Consensus 77 pp~igp~RGskVrIlR~ES 95 (143)
+.....++|+.|.|+.+..
T Consensus 15 ~~eLs~~~Gd~i~v~~~~~ 33 (59)
T 1yn8_A 15 DNELRLAEGDIVFISYKHG 33 (59)
T ss_dssp TTBCCBCTTCEEEEEEEEE
T ss_pred CCCcCCCCCCEEEEEEcCC
Confidence 3467899999999998643
No 187
>2jqo_A Hypothetical protein YOBA; OB-fold, beta barrel, structural genomics, PSI-2, protein structure initiative; NMR {Bacillus subtilis}
Probab=27.46 E-value=19 Score=26.67 Aligned_cols=12 Identities=42% Similarity=0.589 Sum_probs=10.2
Q ss_pred CCCCCCCCeeEE
Q 032316 79 PIGPKRGAKVKI 90 (143)
Q Consensus 79 ~igp~RGskVrI 90 (143)
--++++|+||||
T Consensus 68 ~~~lK~GdKIKV 79 (108)
T 2jqo_A 68 TDDLKRGEKIKV 79 (108)
T ss_dssp GGGCCTTEEEEE
T ss_pred ccccCCCCEEEE
Confidence 346899999998
No 188
>2jvv_A Transcription antitermination protein NUSG; transcription factor, transcription regulation, transcription termination; NMR {Escherichia coli} PDB: 2k06_A 2kvq_G
Probab=27.36 E-value=86 Score=22.59 Aligned_cols=39 Identities=31% Similarity=0.292 Sum_probs=28.4
Q ss_pred CCCCCCCCCeeEEeeccceeccccceEEEEcCCCCCcccEEE
Q 032316 78 PPIGPKRGAKVKILRRESYWYNGIGSVVAVDQDPKSRYPVVV 119 (143)
Q Consensus 78 p~igp~RGskVrIlR~ESYWyn~vGtVvsVDqs~girYPVvV 119 (143)
+.+..+.|++|||.- -=+-+-.|+|..||.+ .-|.=|.|
T Consensus 124 ~~~~~~~Gd~V~V~~--GPf~g~~G~v~~v~~~-k~r~~V~v 162 (181)
T 2jvv_A 124 PKTLFEPGEMVRVND--GPFADFNGVVEEVDYE-KSRLKVSV 162 (181)
T ss_dssp CCCCCCTTEEEEECS--STTTTEEEEEEEEETT-TTEEEEEE
T ss_pred ccccCCCCCEEEEec--cCCCCcEEEEEEEeCC-CCEEEEEE
Confidence 456788999999984 4466778999999976 33444444
No 189
>2eqj_A Metal-response element-binding transcription factor 2; structure genomics,tudor domain, zinc-regulated factor 1, ZIRF1; NMR {Mus musculus}
Probab=27.33 E-value=1.5e+02 Score=20.08 Aligned_cols=45 Identities=16% Similarity=0.330 Sum_probs=30.6
Q ss_pred CCCCCCCCCCCCCeeEEeeccceeccccceEEEEcCCCCCcccEEEEeee
Q 032316 74 KPKPPPIGPKRGAKVKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNK 123 (143)
Q Consensus 74 ~~kpp~igp~RGskVrIlR~ESYWyn~vGtVvsVDqs~girYPVvVRF~k 123 (143)
+.+-+....+-|+-|+--=..---| .|+|.+|++..| -.+|||+.
T Consensus 6 ~~~~~~~~f~vGddVLA~wtDGl~Y--~gtI~~V~~~~g---tC~V~F~D 50 (66)
T 2eqj_A 6 SGKKPACKFEEGQDVLARWSDGLFY--LGTIKKINILKQ---SCFIIFED 50 (66)
T ss_dssp CCCCCCCCSCTTCEEEEECTTSCEE--EEEEEEEETTTT---EEEEEETT
T ss_pred ccccccccccCCCEEEEEEccCcEE--EeEEEEEccCCc---EEEEEEcc
Confidence 3455667889999997652222222 599999999644 36889864
No 190
>1u5u_A Allene oxide synthase-lipoxygenase protein; catalase, heme, eicosanoid, fusion PR lyase; HET: HEM; 2.00A {Plexaura homomalla} SCOP: e.5.1.2
Probab=27.25 E-value=25 Score=29.59 Aligned_cols=13 Identities=15% Similarity=0.462 Sum_probs=12.0
Q ss_pred CCcccEEEEeeee
Q 032316 112 KSRYPVVVRFNKV 124 (143)
Q Consensus 112 girYPVvVRF~kV 124 (143)
|-+|||+|||..+
T Consensus 94 gk~tpv~vRFSt~ 106 (374)
T 1u5u_A 94 GRTFPARLRHANL 106 (374)
T ss_dssp TCEEEEEEEEEBS
T ss_pred CCeeeEEEEecCC
Confidence 6799999999998
No 191
>1nm7_A Peroxisomal membrane protein PAS20; yeast, PEX5P, PEX14P, PEX13P, import machine, SH3 domain, protein transport; NMR {Saccharomyces cerevisiae} SCOP: b.34.2.1
Probab=27.25 E-value=48 Score=20.97 Aligned_cols=16 Identities=25% Similarity=0.497 Sum_probs=14.2
Q ss_pred CCCCCCCCeeEEeecc
Q 032316 79 PIGPKRGAKVKILRRE 94 (143)
Q Consensus 79 ~igp~RGskVrIlR~E 94 (143)
....++|+.|+|+++.
T Consensus 24 ELsf~~Gd~i~Vl~~~ 39 (69)
T 1nm7_A 24 EVALKKGDLMAILSKK 39 (69)
T ss_dssp CCCCCTTCEEEECCSS
T ss_pred ccCCCCCCEEEEEecC
Confidence 5678999999999986
No 192
>2dmo_A Neutrophil cytosol factor 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.97 E-value=56 Score=19.67 Aligned_cols=20 Identities=20% Similarity=0.406 Sum_probs=16.0
Q ss_pred CCCCCCCCeeEEeecc-ceec
Q 032316 79 PIGPKRGAKVKILRRE-SYWY 98 (143)
Q Consensus 79 ~igp~RGskVrIlR~E-SYWy 98 (143)
....++|+.|.|+.+. +-|+
T Consensus 23 eLs~~~Gd~i~v~~~~~~~Ww 43 (68)
T 2dmo_A 23 ELQVMPGNIVFVLKKGNDNWA 43 (68)
T ss_dssp SCCCCTTCEEEECEECSSSCE
T ss_pred CCCCCCCCEEEEEEeCCCCEE
Confidence 5788999999999864 4566
No 193
>3bbo_R Ribosomal protein L19; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=26.90 E-value=11 Score=31.07 Aligned_cols=12 Identities=33% Similarity=0.443 Sum_probs=0.0
Q ss_pred eeeEEeeccccC
Q 032316 44 FRLVVRASEEAA 55 (143)
Q Consensus 44 ~rlvvra~e~~a 55 (143)
.+.||||+.++.
T Consensus 72 ~~f~~r~~~~~~ 83 (233)
T 3bbo_R 72 NSFVVRSEAEDS 83 (233)
T ss_dssp ------------
T ss_pred cceeEeeccccC
Confidence 567899975543
No 194
>3ew1_A Rhizavidin; high affinity, biotin, unknown function; 1.50A {Rhizobium etli} PDB: 3ew2_A*
Probab=26.87 E-value=22 Score=26.79 Aligned_cols=20 Identities=30% Similarity=0.469 Sum_probs=15.3
Q ss_pred EeeccceeccccceEEEEcC
Q 032316 90 ILRRESYWYNGIGSVVAVDQ 109 (143)
Q Consensus 90 IlR~ESYWyn~vGtVvsVDq 109 (143)
|---...||||.|++..|..
T Consensus 12 ~~~~~GtW~NqlGS~m~I~~ 31 (135)
T 3ew1_A 12 IASASSSWQNQSGSTMIIQV 31 (135)
T ss_dssp TBTSEEEEEETTSCEEEEEE
T ss_pred hhcCceeEEcCCCCEEEEEE
Confidence 33446789999999988764
No 195
>2uyw_A Xenavidin; beta-barrel, biotin-binding protein, glycoprotein; HET: BTN; 1.7A {Xenopus tropicalis} PDB: 2uz2_A*
Probab=26.85 E-value=27 Score=25.68 Aligned_cols=16 Identities=25% Similarity=0.615 Sum_probs=14.0
Q ss_pred ccceeccccceEEEEc
Q 032316 93 RESYWYNGIGSVVAVD 108 (143)
Q Consensus 93 ~ESYWyn~vGtVvsVD 108 (143)
-+..||||.|++..|.
T Consensus 8 l~G~W~NqlGS~m~I~ 23 (130)
T 2uyw_A 8 LQGQWRNKLGSNLIIE 23 (130)
T ss_dssp CCEEEEETTCCEEEEC
T ss_pred CcEEEEeCCCCEEEEE
Confidence 4678999999999887
No 196
>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain, NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B
Probab=26.50 E-value=49 Score=24.03 Aligned_cols=22 Identities=23% Similarity=0.549 Sum_probs=17.5
Q ss_pred CCCCCCCCCCeeEEeec-cceec
Q 032316 77 PPPIGPKRGAKVKILRR-ESYWY 98 (143)
Q Consensus 77 pp~igp~RGskVrIlR~-ESYWy 98 (143)
+-.+..++|+.|.|+.+ ++-|+
T Consensus 25 ~~eLs~~~Gd~i~vl~~~~~gWw 47 (193)
T 1ng2_A 25 GSEMALSTGDVVEVVEKSESGWW 47 (193)
T ss_dssp TTCCCBCTTCEEEEEECCTTSCC
T ss_pred CCcCCCCCCCEEEEEEecCCCeE
Confidence 44688999999999997 55555
No 197
>2yt6_A Adult MALE urinary bladder cDNA, riken FULL- length enriched library, clone:9530076O17...; SH3_1 domain; NMR {Mus musculus}
Probab=26.18 E-value=58 Score=21.17 Aligned_cols=22 Identities=23% Similarity=0.637 Sum_probs=17.0
Q ss_pred CCCCCCCCCCeeEEeec-cceec
Q 032316 77 PPPIGPKRGAKVKILRR-ESYWY 98 (143)
Q Consensus 77 pp~igp~RGskVrIlR~-ESYWy 98 (143)
+-.+..++|+.|.|+.+ +.-|+
T Consensus 41 ~~eLs~~~Gd~i~v~~~~~~~Ww 63 (109)
T 2yt6_A 41 TEDLSFKKGERFQIINNTEGDWW 63 (109)
T ss_dssp TTSCCCCTTCEEEEEECSCTTCE
T ss_pred CCccCCCCCCEEEEEEccCCCcE
Confidence 34678999999999975 55555
No 198
>3mea_A SAGA-associated factor 29 homolog; structural genomics consortium, SGC, nucleus, transcription, transcription regulation, chromosomal protein, DNA-binding; HET: M3L; 1.26A {Homo sapiens} PDB: 3meu_A* 3met_A* 3me9_A* 3mev_A* 3lx7_A 3mew_A
Probab=25.89 E-value=1.1e+02 Score=23.70 Aligned_cols=39 Identities=21% Similarity=0.352 Sum_probs=29.3
Q ss_pred CCCCCCCCCCCeeEEeec----cceeccccceEEEEcCCCCCcccE
Q 032316 76 KPPPIGPKRGAKVKILRR----ESYWYNGIGSVVAVDQDPKSRYPV 117 (143)
Q Consensus 76 kpp~igp~RGskVrIlR~----ESYWyn~vGtVvsVDqs~girYPV 117 (143)
..+-.-++.|++|-.+.+ |.=|.. +.|++++.+ +.||=|
T Consensus 39 ~~~~~~~~~G~~VAakvk~~~~~~~WIL--a~Vv~~~~~-~~rYeV 81 (180)
T 3mea_A 39 ASGDYVARPGDKVAARVKAVDGDEQWIL--AEVVSYSHA-TNKYEV 81 (180)
T ss_dssp CCTTCCCCTTCEEEEEEECCC--EEEEE--EEEEEEETT-TTEEEE
T ss_pred CCCCcccCCCCEEEEEcCCCCCCccEEE--EEEEEEcCC-CCEEEE
Confidence 344567889999988876 567986 789999886 778855
No 199
>2egc_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.79 E-value=43 Score=20.72 Aligned_cols=18 Identities=22% Similarity=0.493 Sum_probs=14.8
Q ss_pred CCCCCCCCCeeEEeeccc
Q 032316 78 PPIGPKRGAKVKILRRES 95 (143)
Q Consensus 78 p~igp~RGskVrIlR~ES 95 (143)
.....++|++|.|+.++.
T Consensus 24 ~eLs~~~Gd~i~vl~~~~ 41 (75)
T 2egc_A 24 ETAGFQEGVSMEVLERNP 41 (75)
T ss_dssp SSCCBCTTCEEEECEECT
T ss_pred CcCCCCCCCEEEEEEcCC
Confidence 357899999999998743
No 200
>2csq_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.72 E-value=42 Score=21.86 Aligned_cols=20 Identities=15% Similarity=0.348 Sum_probs=15.4
Q ss_pred CCCCCCCCeeEEeec--cc-eec
Q 032316 79 PIGPKRGAKVKILRR--ES-YWY 98 (143)
Q Consensus 79 ~igp~RGskVrIlR~--ES-YWy 98 (143)
....++|++|.|+.+ +. +|+
T Consensus 41 eLsf~~Gd~i~vl~~~~~~gWw~ 63 (97)
T 2csq_A 41 ELPFKEGQIIKVYGDKDADGFYR 63 (97)
T ss_dssp BCCBCTTCEEEEEEEECTTCEEE
T ss_pred ccCCCCCCEEEEEEecCCCCeEE
Confidence 577899999999954 45 554
No 201
>1si8_A Catalase; N-terminal ARM, anti-parallel beta-barrel, wrapping region, terminal helical region, tetramer, heme group, oxidoreducta; HET: HEM; 2.30A {Enterococcus faecalis} SCOP: e.5.1.1
Probab=25.54 E-value=27 Score=30.65 Aligned_cols=14 Identities=29% Similarity=0.510 Sum_probs=12.4
Q ss_pred CCCcccEEEEeeee
Q 032316 111 PKSRYPVVVRFNKV 124 (143)
Q Consensus 111 ~girYPVvVRF~kV 124 (143)
+|-+|||+|||..|
T Consensus 82 ~Gk~tpv~vRFStv 95 (484)
T 1si8_A 82 VGKETPLFARFSTV 95 (484)
T ss_dssp TTCEEEEEEEEECS
T ss_pred CCceeeEEEEecCC
Confidence 47899999999887
No 202
>2dbk_A CRK-like protein; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.52 E-value=51 Score=21.00 Aligned_cols=20 Identities=20% Similarity=0.197 Sum_probs=16.0
Q ss_pred CCCCCCCCeeEEeec-cceec
Q 032316 79 PIGPKRGAKVKILRR-ESYWY 98 (143)
Q Consensus 79 ~igp~RGskVrIlR~-ESYWy 98 (143)
....++|+.|.|+.+ +.-|+
T Consensus 34 eLsf~~Gd~i~v~~~~~~~Ww 54 (88)
T 2dbk_A 34 ALALEVGDIVKVTRMNINGQW 54 (88)
T ss_dssp BCCBCTTCEEEEEEECTTSCE
T ss_pred cccCCCCCEEEEEEecCCCEE
Confidence 578999999999987 44555
No 203
>1wxu_A Peroxisomal biogenesis factor 13; SH3 domain, PEX13, protein-protein interaction, structural genomics; NMR {Mus musculus}
Probab=25.34 E-value=39 Score=21.72 Aligned_cols=17 Identities=18% Similarity=0.307 Sum_probs=15.0
Q ss_pred CCCCCCCCeeEEeeccc
Q 032316 79 PIGPKRGAKVKILRRES 95 (143)
Q Consensus 79 ~igp~RGskVrIlR~ES 95 (143)
.+..++|++|.|++++.
T Consensus 33 eLsf~~Gd~i~v~~~~~ 49 (93)
T 1wxu_A 33 EISFRAGDMLNLALKEQ 49 (93)
T ss_dssp BCCBCSSCBCEECCTTT
T ss_pred ccCcCCCCEEEEEECCC
Confidence 68899999999999864
No 204
>2o2o_A SH3-domain kinase-binding protein 1; CIN85, protein binding; NMR {Homo sapiens}
Probab=25.28 E-value=48 Score=21.89 Aligned_cols=21 Identities=19% Similarity=0.512 Sum_probs=17.2
Q ss_pred CCCCCCCCeeEEeec-cceecc
Q 032316 79 PIGPKRGAKVKILRR-ESYWYN 99 (143)
Q Consensus 79 ~igp~RGskVrIlR~-ESYWyn 99 (143)
....++|+.|.|+.+ ++-|+.
T Consensus 34 eLsf~~Gd~i~V~~~~~~gWw~ 55 (92)
T 2o2o_A 34 ELELKVGDIIEVVGEVEEGWWE 55 (92)
T ss_dssp CCCBCSSCEEECCCGGGSSCBC
T ss_pred cccccCCCEEEEeEecCCCEEE
Confidence 678999999999987 566664
No 205
>1x6g_A Megakaryocyte-associated tyrosine-protein kinase; MATK, CTK, HYL, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.15 E-value=70 Score=20.10 Aligned_cols=22 Identities=27% Similarity=0.561 Sum_probs=16.7
Q ss_pred CCCCCCCCCeeEEeecc-c-eecc
Q 032316 78 PPIGPKRGAKVKILRRE-S-YWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~E-S-YWyn 99 (143)
.....++|+.|.|+.+. . -|+.
T Consensus 32 ~eLsf~~Gd~i~v~~~~~~~~Ww~ 55 (81)
T 1x6g_A 32 GELAFRKGDVVTILEACENKSWYR 55 (81)
T ss_dssp TCCCBCTTCEEEEEECCCSSSEEE
T ss_pred CCCCCCCCCEEEEEeccCCCCeEE
Confidence 36789999999999863 2 4654
No 206
>2isa_A Catalase; peroxidase, heme, oxidoreductase, iron, hydrogen peroxide; HET: OMT HEM; 1.97A {Vibrio salmonicida} PDB: 1m85_A* 1mqf_A* 1nm0_A* 2cag_A* 2cah_A* 1e93_A* 1h7k_A* 1h6n_A* 3hb6_A*
Probab=25.07 E-value=28 Score=30.50 Aligned_cols=15 Identities=20% Similarity=0.315 Sum_probs=12.8
Q ss_pred CCCcccEEEEeeeee
Q 032316 111 PKSRYPVVVRFNKVN 125 (143)
Q Consensus 111 ~girYPVvVRF~kVN 125 (143)
+|-+|||+|||..|-
T Consensus 81 ~Gk~tpv~vRFStv~ 95 (483)
T 2isa_A 81 IGKKTDMFARFSTVA 95 (483)
T ss_dssp TTCEEEEEEEEECSS
T ss_pred CCceeeEEEEeecCC
Confidence 478999999999873
No 207
>4ag1_C Fynomer; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Synthetic construct} PDB: 4afz_C 4ag2_C* 4afq_C* 4afs_C 4afu_C 1azg_B 1nyf_A 1nyg_A 1a0n_B 3ua7_A 3ua6_A 1fyn_A 1m27_C* 1shf_A 1zbj_A 1efn_A 1avz_C 1nlo_C* 1nlp_C* 1qwe_A ...
Probab=24.98 E-value=56 Score=20.85 Aligned_cols=22 Identities=23% Similarity=0.527 Sum_probs=17.1
Q ss_pred CCCCCCCCCeeEEeecc-ceecc
Q 032316 78 PPIGPKRGAKVKILRRE-SYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~E-SYWyn 99 (143)
.....++|+.|.|+.+. +-|+.
T Consensus 21 ~eLsf~~Gd~i~vl~~~~~~Ww~ 43 (84)
T 4ag1_C 21 TDLSFHKGEKFQILEFGPGDWWE 43 (84)
T ss_dssp TBCCBCTTCEEEEEECCSSSEEE
T ss_pred CcccccCCCEEEEEEecCCCeEE
Confidence 36789999999999874 55653
No 208
>2y32_A BLR5658 protein, bradavidin; biotin-binding protein; 1.78A {Bradyrhizobium japonicum}
Probab=24.85 E-value=29 Score=26.19 Aligned_cols=15 Identities=33% Similarity=0.583 Sum_probs=12.4
Q ss_pred cceeccccceEEEEc
Q 032316 94 ESYWYNGIGSVVAVD 108 (143)
Q Consensus 94 ESYWyn~vGtVvsVD 108 (143)
+-.||||.|++..|.
T Consensus 4 ~G~W~NqlGS~mtI~ 18 (138)
T 2y32_A 4 NWTWTNQYGSTLAIT 18 (138)
T ss_dssp EEEEECTTSCEEEEE
T ss_pred ceEEEcCCCCEEEEE
Confidence 458999999887775
No 209
>1gbq_A GRB2; complex (signal transduction/peptide), SH3 domain; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 1gbr_A 2gbq_A 3gbq_A 4gbq_A
Probab=24.77 E-value=49 Score=20.35 Aligned_cols=16 Identities=38% Similarity=0.571 Sum_probs=14.4
Q ss_pred CCCCCCCCeeEEeecc
Q 032316 79 PIGPKRGAKVKILRRE 94 (143)
Q Consensus 79 ~igp~RGskVrIlR~E 94 (143)
....++|+.|.|+++.
T Consensus 25 eLs~~~Gd~i~v~~~~ 40 (74)
T 1gbq_A 25 ELSFKRGDILKVLNEE 40 (74)
T ss_dssp BCCBCTTCEEECCBCS
T ss_pred eeeEcCCCEEEEeEec
Confidence 6789999999999976
No 210
>2zsc_A Tamavidin2; biotin binding protein, avidin-like structure; HET: BTN; 1.30A {Pleurotus cornucopiae}
Probab=24.72 E-value=25 Score=26.67 Aligned_cols=27 Identities=26% Similarity=0.626 Sum_probs=20.0
Q ss_pred ceeccccceEEEEcCCC---------------CCcccEEEEe
Q 032316 95 SYWYNGIGSVVAVDQDP---------------KSRYPVVVRF 121 (143)
Q Consensus 95 SYWyn~vGtVvsVDqs~---------------girYPVvVRF 121 (143)
--||||.|+...|.++. +.-||+..++
T Consensus 10 GtW~NqlGStmtI~~~~~G~itGtY~Tav~~~~~~~~~sg~~ 51 (141)
T 2zsc_A 10 GTWYNELNSKMELTANKDGTLTGKYLSKVGDVYVPYPLSGRY 51 (141)
T ss_dssp EEEEETTCCEEEEEECTTSEEEEEEECSSSSCCSCEEEEEEE
T ss_pred EEEEcCCCCEEEEEECCCCEEEEEEeccccccCCCcccceEE
Confidence 46999999999987542 2357777776
No 211
>2r58_A Polycomb protein SCM; MBT repeat, sex COMB on midleg, DI-methyl lysine, regulator, developmental protein, metal-binding, nucleus; HET: MLY; 2.00A {Drosophila melanogaster} PDB: 2r57_A* 2r5a_A* 2r5m_A*
Probab=24.61 E-value=1.6e+02 Score=23.67 Aligned_cols=56 Identities=23% Similarity=0.272 Sum_probs=0.0
Q ss_pred ccCCCcCCCCCCCCCCCCCCCCCCCeeEEeeccceeccccceEEEEcCCCCCcccEEEEee
Q 032316 62 TTAAPAEGEAAPKPKPPPIGPKRGAKVKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFN 122 (143)
Q Consensus 62 ~~~~~~~~~~~~~~kpp~igp~RGskVrIlR~ESYWyn~vGtVvsVDqs~girYPVvVRF~ 122 (143)
+.++|+.-=....+.+..-+.+.|.|+...-+-.=..=-+.||+.|+-. | +.|+||
T Consensus 124 a~~aP~~lF~~~~~~~~~~~F~vGMKLEavD~~np~~icvATV~~v~g~---r--l~v~fD 179 (265)
T 2r58_A 124 AMVAPEEIFQPEPPEPEENLFKVGQKLEAVDKKNPQLICCATVDAIKDD---Q--IHVTFD 179 (265)
T ss_dssp CCBCCGGGSCCCCCCCSSCCCCTTCEEEEECTTSTTCEEEEEEEEEETT---E--EEEEET
T ss_pred CccCCHHHhcccCCCCcccccccCcEEEeccCCCCCCEEEEEEEEecCC---E--EEEEeC
No 212
>1dgf_A Catalase; heme, NADPH, hydrogen peroxide, oxidoreductase; HET: HEM NDP; 1.50A {Homo sapiens} SCOP: e.5.1.1 PDB: 1dgg_A* 1f4j_A* 1qqw_A* 1dgh_A* 1dgb_A* 3rgp_A* 3re8_A* 3rgs_A* 3nwl_A* 4blc_A* 1th2_A* 1th3_A* 1th4_A* 1tgu_A* 7cat_A* 8cat_A*
Probab=24.53 E-value=29 Score=30.56 Aligned_cols=14 Identities=36% Similarity=0.655 Sum_probs=12.4
Q ss_pred CCCcccEEEEeeee
Q 032316 111 PKSRYPVVVRFNKV 124 (143)
Q Consensus 111 ~girYPVvVRF~kV 124 (143)
+|-+|||+|||..|
T Consensus 99 ~Gk~tpv~vRFStv 112 (497)
T 1dgf_A 99 IGKKTPIAVRFSTV 112 (497)
T ss_dssp TTCEEEEEEEEECS
T ss_pred CCceeeEEEEeecC
Confidence 47899999999887
No 213
>3i5r_A Phosphatidylinositol 3-kinase regulatory subunit alpha; SH3 domain, peptide complex, alternative splicing, disease mutation, HOST-virus interaction, phosphoprotein, polymorphism; 1.70A {Homo sapiens} SCOP: b.34.2.1 PDB: 3i5s_A 1pht_A 1pnj_A 2pni_A 1pks_A 1pkt_A
Probab=24.49 E-value=40 Score=21.13 Aligned_cols=17 Identities=12% Similarity=0.128 Sum_probs=14.2
Q ss_pred CCCCCCCCCCeeEEeec
Q 032316 77 PPPIGPKRGAKVKILRR 93 (143)
Q Consensus 77 pp~igp~RGskVrIlR~ 93 (143)
+.....++|+.|.|+++
T Consensus 19 ~~eLs~~~Gd~I~V~~~ 35 (83)
T 3i5r_A 19 EEDIDLHLGDILTVNKG 35 (83)
T ss_dssp TTBCCBCTTCEEEEEHH
T ss_pred CCccccCCCCEEEEeec
Confidence 34678999999999975
No 214
>2j2m_A Catalase; functional class, oxidoreductase; HET: HEM; 2.4A {Exiguobacterium oxidotolerans}
Probab=24.29 E-value=30 Score=30.47 Aligned_cols=14 Identities=36% Similarity=0.631 Sum_probs=12.4
Q ss_pred CCCcccEEEEeeee
Q 032316 111 PKSRYPVVVRFNKV 124 (143)
Q Consensus 111 ~girYPVvVRF~kV 124 (143)
+|-+|||+|||..|
T Consensus 84 ~Gk~tpv~vRFStv 97 (491)
T 2j2m_A 84 EGTEVPVFARFSTV 97 (491)
T ss_dssp TTCEEEEEEEEECS
T ss_pred CCccceeEeeccCC
Confidence 47899999999987
No 215
>1a4e_A Catalase A; oxidoreductase, peroxidase; HET: HEM; 2.40A {Saccharomyces cerevisiae} SCOP: e.5.1.1
Probab=24.26 E-value=30 Score=30.44 Aligned_cols=15 Identities=27% Similarity=0.377 Sum_probs=12.8
Q ss_pred CCCcccEEEEeeeee
Q 032316 111 PKSRYPVVVRFNKVN 125 (143)
Q Consensus 111 ~girYPVvVRF~kVN 125 (143)
+|-+|||+|||..|-
T Consensus 84 ~Gk~tpv~vRFStv~ 98 (488)
T 1a4e_A 84 IGKRTKCLTRFSTVG 98 (488)
T ss_dssp TTCEEEEEEEEECSS
T ss_pred CCceeeEEEEeecCC
Confidence 478999999999873
No 216
>1qwl_A KATA catalase; beta barrel, azide complex, oxyferryl complex, oxidoreductas; HET: HEM; 1.60A {Helicobacter pylori} SCOP: e.5.1.1 PDB: 1qwm_A* 2a9e_A* 2iqf_A*
Probab=24.09 E-value=30 Score=30.59 Aligned_cols=14 Identities=21% Similarity=0.330 Sum_probs=12.4
Q ss_pred CCCcccEEEEeeee
Q 032316 111 PKSRYPVVVRFNKV 124 (143)
Q Consensus 111 ~girYPVvVRF~kV 124 (143)
+|-+|||+|||..|
T Consensus 84 ~Gk~tpv~vRFStv 97 (505)
T 1qwl_A 84 VGKKTECFFRFSTV 97 (505)
T ss_dssp TTCEEEEEEEEECS
T ss_pred CCceeeEEEEeccC
Confidence 47899999999887
No 217
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=24.00 E-value=46 Score=21.61 Aligned_cols=46 Identities=17% Similarity=0.311 Sum_probs=29.8
Q ss_pred CCCCCCCCCCCeeEEe--ec----cceeccccceEEEEcCCCCCcccEEEEeee
Q 032316 76 KPPPIGPKRGAKVKIL--RR----ESYWYNGIGSVVAVDQDPKSRYPVVVRFNK 123 (143)
Q Consensus 76 kpp~igp~RGskVrIl--R~----ESYWyn~vGtVvsVDqs~girYPVvVRF~k 123 (143)
.|+.+-+++|+.|++. .. -+++..+.|. +.+-.||-.+-+...+++
T Consensus 36 ~p~~i~v~~G~~V~~~~~n~d~~~H~~~i~~~~~--~~~i~pG~~~~~~f~~~~ 87 (112)
T 1iby_A 36 EPETLVVKKGDAVKVVVENKSPISEGFSIDAFGV--QEVIKAGETKTISFTADK 87 (112)
T ss_dssp ESCEEEEETTCEEEEEEEECSSSCEEEEEGGGTE--EEEECTTCEEEEEEECCS
T ss_pred cCCEEEEeCCCEEEEEEEECCCCeEEEEEcCCCc--eeEeCCCCEEEEEEECCC
Confidence 3567889999999973 33 3455555563 556666776666655554
No 218
>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural protein; NMR {Dictyostelium discoideum}
Probab=23.97 E-value=59 Score=20.32 Aligned_cols=16 Identities=19% Similarity=0.191 Sum_probs=14.0
Q ss_pred CCCCCCCCeeEEeecc
Q 032316 79 PIGPKRGAKVKILRRE 94 (143)
Q Consensus 79 ~igp~RGskVrIlR~E 94 (143)
....++|+.|.|+.++
T Consensus 26 eLsf~~Gd~i~v~~~~ 41 (80)
T 2i0n_A 26 LLPFKRNDIITITFKD 41 (80)
T ss_dssp SCCBCSSEEEEEEEES
T ss_pred CcCCCCCCEEEEEEec
Confidence 5789999999999973
No 219
>2xq1_A Peroxisomal catalase; oxidoreductase, hydrogen peroxide detoxification, PTS1; HET: HEM; 2.90A {Pichia angusta}
Probab=23.81 E-value=30 Score=30.56 Aligned_cols=16 Identities=19% Similarity=0.351 Sum_probs=13.2
Q ss_pred CCCCcccEEEEeeeee
Q 032316 110 DPKSRYPVVVRFNKVN 125 (143)
Q Consensus 110 s~girYPVvVRF~kVN 125 (143)
.+|-+|||+|||..|-
T Consensus 94 ~~Gk~tpv~vRFStv~ 109 (509)
T 2xq1_A 94 TVGKKTRIFTRFSTVG 109 (509)
T ss_dssp STTCEEEEEEEEECSS
T ss_pred CCCceeeEEEEeecCC
Confidence 3478999999999873
No 220
>2kq8_A Cell WALL hydrolase; GFT protein structure, NESG, PSI, SH3 domain, structural genomics, protein structure initiative; NMR {Bacillus thuringiensis serovarkonkukian}
Probab=23.73 E-value=19 Score=22.49 Aligned_cols=19 Identities=26% Similarity=0.560 Sum_probs=15.9
Q ss_pred CCCCCCeeEEeeccceecc
Q 032316 81 GPKRGAKVKILRRESYWYN 99 (143)
Q Consensus 81 gp~RGskVrIlR~ESYWyn 99 (143)
.+.+|++|+|+..+.=||+
T Consensus 27 ~l~~G~~v~v~~~~~~W~~ 45 (70)
T 2kq8_A 27 ALPQGQKVQVISENSGWSK 45 (70)
T ss_dssp CCCSSSSCCCCEEETTEEE
T ss_pred EECCCCEEEEEEecCCEEE
Confidence 4778999999998877875
No 221
>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein; NMR {Saccharomyces cerevisiae}
Probab=23.60 E-value=61 Score=20.13 Aligned_cols=21 Identities=19% Similarity=0.259 Sum_probs=15.9
Q ss_pred CCCCCCCCCeeEEeeccc-eec
Q 032316 78 PPIGPKRGAKVKILRRES-YWY 98 (143)
Q Consensus 78 p~igp~RGskVrIlR~ES-YWy 98 (143)
.....++|+.|.|+.+.. -|+
T Consensus 20 ~eLs~~~Gd~i~v~~~~~~gWw 41 (73)
T 2lcs_A 20 NELRLAEGDIVFISYKHGQGWL 41 (73)
T ss_dssp TBCCBCTTCEEEEEEEETTTEE
T ss_pred CccCCcCCCEEEEEEEcCCCEE
Confidence 367899999999998643 254
No 222
>1nnx_A Protein YGIW; structural genomics, hypothetical protein, OB-fold, structure 2 function project, S2F, unknown function; 1.45A {Escherichia coli} SCOP: b.40.10.1
Probab=23.60 E-value=20 Score=25.70 Aligned_cols=22 Identities=23% Similarity=0.508 Sum_probs=18.1
Q ss_pred CCCCeeEEeeccceecccc-ceE
Q 032316 83 KRGAKVKILRRESYWYNGI-GSV 104 (143)
Q Consensus 83 ~RGskVrIlR~ESYWyn~v-GtV 104 (143)
=+|-.|+-++.|.|+|.|- |+|
T Consensus 42 L~G~Iv~~~~~d~Y~F~D~TG~I 64 (109)
T 1nnx_A 42 LRGNIVERISDDLYVFKDASGTI 64 (109)
T ss_dssp EEEEEEEEEETTEEEEEETTEEE
T ss_pred EEEEEEEEeCCCeEEEECCCccE
Confidence 3688999999999999874 543
No 223
>1m7s_A Catalase; beta barrel, alpha helical domain, oxidoreductase; HET: HEM; 1.80A {Pseudomonas syringae} SCOP: e.5.1.1
Probab=23.50 E-value=31 Score=30.26 Aligned_cols=15 Identities=40% Similarity=0.638 Sum_probs=12.8
Q ss_pred CCCcccEEEEeeeee
Q 032316 111 PKSRYPVVVRFNKVN 125 (143)
Q Consensus 111 ~girYPVvVRF~kVN 125 (143)
+|-+|||+|||..|-
T Consensus 79 ~Gk~tpv~vRFStv~ 93 (484)
T 1m7s_A 79 SGEKTPVFVRFSSVV 93 (484)
T ss_dssp TTCEEEEEEEEECSS
T ss_pred CCCeeEEEEEeccCC
Confidence 478999999999873
No 224
>1dj7_B Ferredoxin thioredoxin reductase: variable chain; 4Fe-4S cluster binding fold with CXCX16CXCX8CXC binding MOTI electron transport; 1.60A {Synechocystis SP} SCOP: b.34.4.3 PDB: 2pu9_B 2pvo_B 2puo_B 2puk_B 2pvd_B 2pvg_B
Probab=23.28 E-value=35 Score=23.77 Aligned_cols=55 Identities=27% Similarity=0.580 Sum_probs=33.0
Q ss_pred CCCCeeEEe-----------eccceeccc-cceEEEEc---CC-C-CCcccEEEEeeeeeecccccCccccccceec
Q 032316 83 KRGAKVKIL-----------RRESYWYNG-IGSVVAVD---QD-P-KSRYPVVVRFNKVNYANVSTNNYALDEIEEV 142 (143)
Q Consensus 83 ~RGskVrIl-----------R~ESYWyn~-vGtVvsVD---qs-~-girYPVvVRF~kVNY~gvsTNNfa~~El~ev 142 (143)
+.|++||+. |.+.+=.+. -|+|.++= |. + --.||+.|.|+ +-|. -.|.+||||.+
T Consensus 2 k~GdrVrV~~sv~Vyh~P~~r~~~fDl~GmEGeV~~~v~~wkGr~ISanlP~~V~F~-~kF~----aHlredElE~i 73 (75)
T 1dj7_B 2 NVGDRVRVTSSVVVYHHPEHKKTAFDLQGMEGEVAAVLTEWQGRPISANLPVLVKFE-QRFK----AHFRPDEVTLI 73 (75)
T ss_dssp CTTCEEEECSCCEESCCTTSTTSCEECTTCEEEEEEECSEETTEECCCSSCEEEEET-TTEE----EEECGGGEEEC
T ss_pred CCCCEEEEcccEEEEeCCccCCCCcccccCEEEEEEEEeeccCcEecCCCCEEEEEe-hHhh----hhcchhheeec
Confidence 568888875 223332222 36777765 21 1 24799999997 2222 25678999865
No 225
>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export; 2.5A {Homo sapiens} PDB: 2bzx_A
Probab=23.22 E-value=57 Score=19.59 Aligned_cols=21 Identities=19% Similarity=0.189 Sum_probs=16.4
Q ss_pred CCCCCCCCCeeEEeec-cceec
Q 032316 78 PPIGPKRGAKVKILRR-ESYWY 98 (143)
Q Consensus 78 p~igp~RGskVrIlR~-ESYWy 98 (143)
.....++|+.|.|+.+ ++-|+
T Consensus 18 ~eLsf~~Gd~i~v~~~~~~~Ww 39 (67)
T 2bzy_A 18 TALALEVGDIVKVTRMNINGQW 39 (67)
T ss_dssp TBCCBCTTCEEEEEEECSSSEE
T ss_pred CccccCCCCEEEEEEecCCCeE
Confidence 3678899999999986 44555
No 226
>1z9q_A Neutrophil cytosol factor 4; oxidoreductase activator; NMR {Homo sapiens}
Probab=22.90 E-value=39 Score=21.86 Aligned_cols=22 Identities=23% Similarity=0.428 Sum_probs=17.2
Q ss_pred CCCCCCCCCeeEEeec-cceecc
Q 032316 78 PPIGPKRGAKVKILRR-ESYWYN 99 (143)
Q Consensus 78 p~igp~RGskVrIlR~-ESYWyn 99 (143)
.....++|+.|.|+.+ ++-|+.
T Consensus 33 ~eLsf~~Gd~I~Vl~~~~~gWw~ 55 (79)
T 1z9q_A 33 LELNFKAGDVIFLLSRINKDWLE 55 (79)
T ss_dssp TBCCCCTTCCBCCCEESSSSEEE
T ss_pred CcccccCCCEEEEeEecCCCEEE
Confidence 3578899999999986 556663
No 227
>2dlp_A KIAA1783 protein; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.88 E-value=54 Score=20.68 Aligned_cols=20 Identities=30% Similarity=0.489 Sum_probs=15.7
Q ss_pred CCCCCCCCeeEEeec---cceec
Q 032316 79 PIGPKRGAKVKILRR---ESYWY 98 (143)
Q Consensus 79 ~igp~RGskVrIlR~---ESYWy 98 (143)
....++|+.|.|+.+ +.-|+
T Consensus 24 eLsf~~Gd~i~v~~~~~~~~~Ww 46 (85)
T 2dlp_A 24 LLSFHRGDLIKLLPVATLEPGWQ 46 (85)
T ss_dssp BCCBCTTCEEEECCCSCCCTTEE
T ss_pred CccCcCCCEEEEEEccCCCCCeE
Confidence 578899999999985 45554
No 228
>2c1s_A Biotin binding protein A; HET: BSO; 1.75A {Gallus gallus} PDB: 2c1q_A*
Probab=22.79 E-value=33 Score=25.29 Aligned_cols=16 Identities=25% Similarity=0.677 Sum_probs=13.2
Q ss_pred cceeccccceEEEEcC
Q 032316 94 ESYWYNGIGSVVAVDQ 109 (143)
Q Consensus 94 ESYWyn~vGtVvsVDq 109 (143)
+--||||.|+...|..
T Consensus 8 ~G~W~NqlGS~mtI~~ 23 (126)
T 2c1s_A 8 QGLWRNELGSNMTISA 23 (126)
T ss_dssp CEEEEETTSCEEEECC
T ss_pred cEEEEcCCCCEEEEEE
Confidence 4569999999988873
No 229
>3rdo_A Streptavidin; improved desthiobiotin binding, opene destabilization, biotin binding protein; HET: BTN; 1.40A {Streptomyces avidinii} PDB: 3rdm_A* 3rdq_A* 3rds_A* 3rdu_A* 3rdx_A 3re6_A 3re5_A
Probab=22.77 E-value=24 Score=27.08 Aligned_cols=28 Identities=36% Similarity=0.680 Sum_probs=15.6
Q ss_pred CCCCeeEEeeccc----eeccccceEEEEcCC
Q 032316 83 KRGAKVKILRRES----YWYNGIGSVVAVDQD 110 (143)
Q Consensus 83 ~RGskVrIlR~ES----YWyn~vGtVvsVDqs 110 (143)
-||+.++-.|-+. -||||.|++..|.++
T Consensus 16 ~~~~~~~~~~a~c~l~GtW~NqlGS~m~I~~~ 47 (153)
T 3rdo_A 16 GRGRLIKHMTAEAGITGTWYNQLGSTLIVTAG 47 (153)
T ss_dssp ---------CHHHHHSEEEEETTSCEEEEEEC
T ss_pred ccceEEEEehhccCccEEEEcCCCCEEEEEEC
Confidence 3788888777654 899999999998754
No 230
>4glm_A Dynamin-binding protein; SH3 domain, DNMBP, structural genomics, structural genomics consortium, SGC, SRC homology 3 domains, cell junctions; 1.90A {Homo sapiens}
Probab=22.46 E-value=77 Score=18.78 Aligned_cols=23 Identities=26% Similarity=0.520 Sum_probs=17.2
Q ss_pred CCCCCCCCCCeeEEeecc-ceecc
Q 032316 77 PPPIGPKRGAKVKILRRE-SYWYN 99 (143)
Q Consensus 77 pp~igp~RGskVrIlR~E-SYWyn 99 (143)
+.....++|+.|.|++++ .-|+.
T Consensus 27 ~~eLs~~~Gd~i~v~~~~~~~W~~ 50 (72)
T 4glm_A 27 PNELDFEVGDKIRILATLEDGWLE 50 (72)
T ss_dssp TTBCCBCTTCEEEEEEECSTTEEE
T ss_pred CCcCCCCCCCEEEEEEccCCCEEE
Confidence 335789999999999863 45653
No 231
>1a62_A RHO; transcription termination, termination, RNA binding domain, transcription regulation, OB fold, F1-ATPase; 1.55A {Escherichia coli BL21} SCOP: a.140.3.1 b.40.4.5 PDB: 1a63_A 2a8v_A 1a8v_A
Probab=22.45 E-value=1e+02 Score=22.15 Aligned_cols=32 Identities=22% Similarity=0.443 Sum_probs=24.2
Q ss_pred CCCCCCeeEEe-eccceeccccceEEEEcCCCCCcccEEEEeeeeeec
Q 032316 81 GPKRGAKVKIL-RRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYA 127 (143)
Q Consensus 81 gp~RGskVrIl-R~ESYWyn~vGtVvsVDqs~girYPVvVRF~kVNY~ 127 (143)
|...||.|... |+. +. |-||+-+++-+.||+-
T Consensus 90 ~lr~GD~V~g~vr~~--------------~~-~ek~~~l~~v~~vng~ 122 (130)
T 1a62_A 90 NLRTGDTISGKIRPP--------------KE-GERYFALLKVNEVNFD 122 (130)
T ss_dssp TCCTTCEEEEEEECC--------------CT-TCCSEEEEEEEEETTB
T ss_pred CCCCCCEEEEEEeCC--------------CC-CCcccceeEEEeECCC
Confidence 77889998653 322 22 6799999999999974
No 232
>4dne_A Streptavidin; biotin, biotin-binding protein; HET: DTB; 1.88A {Streptomyces avidinii}
Probab=22.24 E-value=29 Score=27.10 Aligned_cols=17 Identities=35% Similarity=0.733 Sum_probs=14.1
Q ss_pred cceeccccceEEEEcCC
Q 032316 94 ESYWYNGIGSVVAVDQD 110 (143)
Q Consensus 94 ESYWyn~vGtVvsVDqs 110 (143)
+-.||||.|+...|..+
T Consensus 42 ~GtW~NelGS~mtI~~~ 58 (183)
T 4dne_A 42 TGTWYNQLGSTFIVTAG 58 (183)
T ss_dssp CEEEEETTSCEEEEEEC
T ss_pred cEEEEcCCCCEEEEEEC
Confidence 45799999999888765
No 233
>2kgt_A Tyrosine-protein kinase 6; SH3 domain, SRC kinase, PTK6, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=22.15 E-value=58 Score=19.59 Aligned_cols=20 Identities=20% Similarity=0.557 Sum_probs=15.5
Q ss_pred CCCCCCCCCeeEEeec-cceec
Q 032316 78 PPIGPKRGAKVKILRR-ESYWY 98 (143)
Q Consensus 78 p~igp~RGskVrIlR~-ESYWy 98 (143)
.....++|+.|.| .+ ++-|+
T Consensus 25 ~eLs~~~Gd~i~v-~~~~~~Ww 45 (72)
T 2kgt_A 25 EELSFRAGDVFHV-ARKEEQWW 45 (72)
T ss_dssp TSCBCCTTCCEEE-EEECSSCE
T ss_pred CCcCCCCCCEEEE-eeCCCCEE
Confidence 4678999999999 66 55555
No 234
>2yuq_A Tyrosine-protein kinase ITK/TSK; T-cell-specific kinase, tyrosine-protein kinase LYK, kinase EMT, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.79 E-value=61 Score=20.42 Aligned_cols=22 Identities=18% Similarity=0.513 Sum_probs=17.0
Q ss_pred CCCCCCCCCCeeEEeecc-ceec
Q 032316 77 PPPIGPKRGAKVKILRRE-SYWY 98 (143)
Q Consensus 77 pp~igp~RGskVrIlR~E-SYWy 98 (143)
+..+..++|++|+|+.+. .-|+
T Consensus 33 ~~eLs~~~Gd~i~v~~~~~~~Ww 55 (85)
T 2yuq_A 33 PQELALRRNEEYCLLDSSEIHWW 55 (85)
T ss_dssp SSBCCCCBTEEEEEEECCSSSEE
T ss_pred CCcCCCCCCCEEEEEEecCCCeE
Confidence 346789999999999974 3455
No 235
>2ed1_A 130 kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; GTPase activation, membrane, metal-binding, SH3 domain; NMR {Homo sapiens} PDB: 2rqt_A 2rqu_A
Probab=21.67 E-value=64 Score=19.81 Aligned_cols=20 Identities=10% Similarity=0.356 Sum_probs=15.6
Q ss_pred CCCCCCCCeeEEeec-cceec
Q 032316 79 PIGPKRGAKVKILRR-ESYWY 98 (143)
Q Consensus 79 ~igp~RGskVrIlR~-ESYWy 98 (143)
....++|+.|.|+.+ +.-|+
T Consensus 26 eLsf~~Gd~i~v~~~~~~~Ww 46 (76)
T 2ed1_A 26 ELTFIEGEVIIVTGEEDQEWW 46 (76)
T ss_dssp BCCCCSSCEEEESSCCSSSEE
T ss_pred CcCcCCCCEEEEEEecCCCEE
Confidence 578899999999984 34454
No 236
>1udl_A Intersectin 2, KIAA1256; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=21.12 E-value=86 Score=20.23 Aligned_cols=24 Identities=8% Similarity=0.524 Sum_probs=18.1
Q ss_pred CCCCCCCCCCCeeEEeecc-ceecc
Q 032316 76 KPPPIGPKRGAKVKILRRE-SYWYN 99 (143)
Q Consensus 76 kpp~igp~RGskVrIlR~E-SYWyn 99 (143)
.+-.+..++|+.|.|+.+. .-|+.
T Consensus 47 ~~~eLs~~~Gd~i~v~~~~~~~Ww~ 71 (98)
T 1udl_A 47 NEDELSFSKGQLINVMNKDDPDWWQ 71 (98)
T ss_dssp STTSCCCCTTCEEEECBCCSSSEEB
T ss_pred CCCccCCcCCCEEEEEEecCCCEEE
Confidence 3447889999999999874 45554
No 237
>2kbt_A Chimera of proto-oncogene VAV, linker, immunoglobulin G-binding protein G; sortase, protein ligation, intein, inset, solubility enhancement; NMR {Mus musculus}
Probab=21.00 E-value=69 Score=22.69 Aligned_cols=20 Identities=30% Similarity=0.695 Sum_probs=15.8
Q ss_pred CCCCCCCCeeEEeec--cceec
Q 032316 79 PIGPKRGAKVKILRR--ESYWY 98 (143)
Q Consensus 79 ~igp~RGskVrIlR~--ESYWy 98 (143)
....++|+.|.|+++ ++=|+
T Consensus 21 ELsf~~Gd~i~Vl~~~~~~gWw 42 (142)
T 2kbt_A 21 ELSLKEGDIIKILNKKGQQGWW 42 (142)
T ss_dssp BCCCCTTCEEEEEECCCSSSEE
T ss_pred cCCCCCCCEEEEEEecCCCCeE
Confidence 578999999999987 34454
No 238
>2yuo_A CIP85, RUN and TBC1 domain containing 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=20.59 E-value=82 Score=19.34 Aligned_cols=20 Identities=10% Similarity=0.394 Sum_probs=15.6
Q ss_pred CCCCCCCCeeEEeec-cceec
Q 032316 79 PIGPKRGAKVKILRR-ESYWY 98 (143)
Q Consensus 79 ~igp~RGskVrIlR~-ESYWy 98 (143)
.+..++|+.|.|+.+ +.-|+
T Consensus 23 eLs~~~Gd~i~v~~~~~~~Ww 43 (78)
T 2yuo_A 23 ELGFRKNDIITIISQKDEHCW 43 (78)
T ss_dssp BCCBCTTCEEEEEECCSSSEE
T ss_pred CccCCCCCEEEEEEecCCCEE
Confidence 578999999999984 34454
No 239
>1xov_A PLY protein, plypsa; alpha/beta hydrolase, multi-domain, hydrolase; 1.80A {Listeria phage psa} SCOP: b.34.11.4 c.56.5.6
Probab=20.46 E-value=43 Score=27.51 Aligned_cols=18 Identities=28% Similarity=0.791 Sum_probs=16.1
Q ss_pred CCCCCeeEEeeccceecc
Q 032316 82 PKRGAKVKILRRESYWYN 99 (143)
Q Consensus 82 p~RGskVrIlR~ESYWyn 99 (143)
...|++|.|++++.|||+
T Consensus 220 l~~G~~v~V~~~~g~Wy~ 237 (326)
T 1xov_A 220 YKAGSSLLVYEHNKYWYK 237 (326)
T ss_dssp EETTCEEEEEECSSSEEE
T ss_pred EeCCCEEEEEecCCCEEE
Confidence 457999999999999997
No 240
>1sy7_A Catalase 1; heme oxidation, singlet oxygen, oxidoreductase; HET: HDD HEM; 1.75A {Neurospora crassa} SCOP: c.23.16.3
Probab=20.36 E-value=42 Score=30.53 Aligned_cols=15 Identities=40% Similarity=0.580 Sum_probs=12.7
Q ss_pred CCCcccEEEEeeeee
Q 032316 111 PKSRYPVVVRFNKVN 125 (143)
Q Consensus 111 ~girYPVvVRF~kVN 125 (143)
+|-+|||+|||..|-
T Consensus 99 ~Gk~tpv~vRFStv~ 113 (715)
T 1sy7_A 99 TSRETPVFVRFSTVL 113 (715)
T ss_dssp SSCCEEEEEEEECSS
T ss_pred CCceEEEEEEeccCC
Confidence 477999999999873
Done!