Your job contains 1 sequence.
>032317
MKKIAPICLTKYDGDIPSSLDELLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNR
LGWVSQPGRKQKTSSPEQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRCGMCSVS
ELCPSAFKDSSSPSSKSRKSAQK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 032317
(143 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2061345 - symbol:ATNTH1 species:3702 "Arabidop... 576 6.8e-56 1
TAIR|locus:2198738 - symbol:NTH2 "endonuclease III 2" spe... 545 1.3e-52 1
DICTYBASE|DDB_G0277247 - symbol:apnB "putative endonuclea... 382 2.4e-35 1
UNIPROTKB|Q2KID2 - symbol:NTHL1 "Endonuclease III-like pr... 379 5.1e-35 1
UNIPROTKB|E2QX23 - symbol:NTHL1 "Uncharacterized protein"... 373 2.2e-34 1
UNIPROTKB|F1NQP6 - symbol:NTHL1 "Uncharacterized protein"... 371 3.6e-34 1
FB|FBgn0032907 - symbol:CG9272 species:7227 "Drosophila m... 368 7.4e-34 1
WB|WBGene00011201 - symbol:nth-1 species:6239 "Caenorhabd... 368 7.4e-34 1
UNIPROTKB|F1RFB3 - symbol:NTHL1 "Uncharacterized protein"... 364 2.0e-33 1
RGD|1309289 - symbol:Nthl1 "nth (endonuclease III)-like 1... 364 2.0e-33 1
UNIPROTKB|P78549 - symbol:NTHL1 "Endonuclease III-like pr... 362 3.2e-33 1
MGI|MGI:1313275 - symbol:Nthl1 "nth (endonuclease III)-li... 360 5.2e-33 1
ZFIN|ZDB-GENE-120511-4 - symbol:nthl1 "nth endonuclease I... 354 2.3e-32 1
UNIPROTKB|H3BPD5 - symbol:NTHL1 "Endonuclease III-like pr... 353 2.9e-32 1
POMBASE|SPAC30D11.07 - symbol:nth1 "DNA endonuclease III"... 340 6.9e-31 1
CGD|CAL0001822 - symbol:NTG1 species:5476 "Candida albica... 303 5.7e-27 1
UNIPROTKB|Q5A763 - symbol:NTG1 "Putative uncharacterized ... 303 5.7e-27 1
SGD|S000005403 - symbol:NTG2 "DNA N-glycosylase and apuri... 302 7.3e-27 1
TIGR_CMR|GSU_1450 - symbol:GSU_1450 "endonuclease III, pu... 291 1.1e-25 1
SGD|S000000013 - symbol:NTG1 "DNA N-glycosylase and apuri... 257 6.5e-22 1
ASPGD|ASPL0000064583 - symbol:AN10978 species:162425 "Eme... 247 1.4e-20 1
TIGR_CMR|CHY_1121 - symbol:CHY_1121 "endonuclease III" sp... 210 4.1e-17 1
TIGR_CMR|DET_0935 - symbol:DET_0935 "endonuclease III" sp... 203 2.3e-16 1
UNIPROTKB|Q97QE0 - symbol:nth "Endonuclease III" species:... 187 1.1e-14 1
UNIPROTKB|P0AB83 - symbol:nth "endonuclease III; specific... 181 4.9e-14 1
TIGR_CMR|BA_1570 - symbol:BA_1570 "endonuclease III" spec... 180 6.2e-14 1
UNIPROTKB|P63540 - symbol:nth "Endonuclease III" species:... 173 3.4e-13 1
TIGR_CMR|ECH_0857 - symbol:ECH_0857 "endonuclease III" sp... 172 4.4e-13 1
TIGR_CMR|SO_2514 - symbol:SO_2514 "endonuclease III" spec... 172 4.4e-13 1
UNIPROTKB|Q9KT92 - symbol:VC_1011 "Endonuclease III" spec... 164 3.1e-12 1
TIGR_CMR|CBU_1697 - symbol:CBU_1697 "endonuclease III" sp... 164 3.1e-12 1
TIGR_CMR|VC_1011 - symbol:VC_1011 "endonuclease III" spec... 164 3.1e-12 1
TIGR_CMR|APH_0897 - symbol:APH_0897 "endonuclease III" sp... 162 5.0e-12 1
TIGR_CMR|CJE_0698 - symbol:CJE_0698 "endonuclease III" sp... 157 1.7e-11 1
TIGR_CMR|SPO_3581 - symbol:SPO_3581 "endonuclease III" sp... 157 1.7e-11 1
UNIPROTKB|H3BRL9 - symbol:NTHL1 "Endonuclease III-like pr... 140 1.1e-09 1
UNIPROTKB|Q9KUR3 - symbol:VC_0452 "A/G-specific adenine g... 141 4.1e-09 1
TIGR_CMR|VC_0452 - symbol:VC_0452 "A/G-specific adenine g... 141 4.1e-09 1
TIGR_CMR|NSE_0246 - symbol:NSE_0246 "endonuclease III" sp... 134 4.7e-09 1
TIGR_CMR|SO_3368 - symbol:SO_3368 "A/G-specific adenine g... 135 2.0e-08 1
POMBASE|SPAC26A3.02 - symbol:myh1 "adenine DNA glycosylas... 136 2.4e-08 1
TIGR_CMR|CPS_4148 - symbol:CPS_4148 "A/G-specific adenine... 132 4.2e-08 1
TIGR_CMR|CBU_0940 - symbol:CBU_0940 "A/G-specific adenine... 128 1.1e-07 1
TIGR_CMR|SPO_3448 - symbol:SPO_3448 "A/G-specific adenine... 126 1.8e-07 1
UNIPROTKB|O53574 - symbol:mutY "PROBABLE ADENINE GLYCOSYL... 122 3.6e-07 1
TIGR_CMR|CJE_1792 - symbol:CJE_1792 "A/G-specific adenine... 122 4.5e-07 1
UNIPROTKB|Q5T418 - symbol:MUTYH "A/G-specific adenine DNA... 116 6.4e-07 1
ASPGD|ASPL0000003678 - symbol:AN10840 species:162425 "Eme... 106 9.2e-07 2
UNIPROTKB|Q5T413 - symbol:MUTYH "A/G-specific adenine DNA... 116 1.5e-06 1
UNIPROTKB|Q9UIF7 - symbol:MUTYH "A/G-specific adenine DNA... 116 4.4e-06 1
UNIPROTKB|E5KP25 - symbol:MUTYH "A/G-specific adenine DNA... 116 4.4e-06 1
TIGR_CMR|BA_0522 - symbol:BA_0522 "A/G-specific adenine g... 111 8.2e-06 1
UNIPROTKB|P17802 - symbol:mutY "adenine glycosylase; G.C ... 110 9.8e-06 1
MGI|MGI:1917853 - symbol:Mutyh "mutY homolog (E. coli)" s... 112 1.1e-05 1
RGD|620045 - symbol:Mutyh "mutY homolog (E. coli)" specie... 112 1.1e-05 1
UNIPROTKB|Q8R5G2 - symbol:Mutyh "A/G-specific adenine DNA... 112 1.1e-05 1
GENEDB_PFALCIPARUM|PF11_0306 - symbol:PF11_0306 "A/G-spec... 106 6.1e-05 1
UNIPROTKB|Q8II68 - symbol:PF11_0306 "A/G-specific adenine... 106 6.1e-05 1
UNIPROTKB|F1S368 - symbol:MUTYH "Uncharacterized protein"... 104 8.1e-05 1
UNIPROTKB|F1P514 - symbol:MUTYH "Uncharacterized protein"... 102 8.9e-05 1
UNIPROTKB|E1BZT8 - symbol:MUTYH "Uncharacterized protein"... 102 0.00011 1
TAIR|locus:2135828 - symbol:AT4G12740 species:3702 "Arabi... 103 0.00013 1
DICTYBASE|DDB_G0270764 - symbol:myh "monofunctional DNA g... 101 0.00019 1
TAIR|locus:2100138 - symbol:DML2 "demeter-like 2" species... 104 0.00025 1
ZFIN|ZDB-GENE-070112-932 - symbol:ogg1 "8-oxoguanine DNA ... 97 0.00030 1
UNIPROTKB|E2RG99 - symbol:MUTYH "Uncharacterized protein"... 99 0.00036 1
TAIR|locus:2124301 - symbol:DML3 "demeter-like protein 3"... 101 0.00040 1
UNIPROTKB|F1N4K4 - symbol:MUTYH "Uncharacterized protein"... 97 0.00046 1
TAIR|locus:2184432 - symbol:DME "DEMETER" species:3702 "A... 101 0.00081 1
ZFIN|ZDB-GENE-081104-193 - symbol:mutyh "mutY homolog (E.... 94 0.00096 1
>TAIR|locus:2061345 [details] [associations]
symbol:ATNTH1 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA;ISS;IDA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=IEA] [GO:0019104 "DNA N-glycosylase activity"
evidence=IDA] [GO:0042644 "chloroplast nucleoid" evidence=IDA]
InterPro:IPR000445 InterPro:IPR003265 InterPro:IPR003583
InterPro:IPR003651 InterPro:IPR004035 InterPro:IPR004036
InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730 PROSITE:PS00764
PROSITE:PS01155 SMART:SM00278 SMART:SM00478 SMART:SM00525
EMBL:CP002685 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677 GO:GO:0051539
EMBL:AC007169 GO:GO:0004519 GO:GO:0042644 GO:GO:0019104 KO:K10773
IPI:IPI00540590 PIR:H84720 RefSeq:NP_565725.1 UniGene:At.10180
HSSP:P20625 ProteinModelPortal:Q9SIC4 SMR:Q9SIC4 STRING:Q9SIC4
PRIDE:Q9SIC4 EnsemblPlants:AT2G31450.1 GeneID:817703
KEGG:ath:AT2G31450 TAIR:At2g31450 InParanoid:Q9SIC4 OMA:DIEDFAY
PhylomeDB:Q9SIC4 ProtClustDB:CLSN2688602 Genevestigator:Q9SIC4
Uniprot:Q9SIC4
Length = 379
Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
Identities = 102/124 (82%), Positives = 112/124 (90%)
Query: 1 MKKIAPICLTKYDGDIPSSLDELLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNR 60
MKKIA ICL KYDGDIPSSLD+LL LPGIGPKMAHL++++ WN+VQGICVDTHVHRICNR
Sbjct: 234 MKKIARICLVKYDGDIPSSLDDLLSLPGIGPKMAHLILHIAWNDVQGICVDTHVHRICNR 293
Query: 61 LGWVSQPGRKQKTSSPEQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRCGMCSVS 120
LGWVS+PG KQKT+SPE+TR LQ WLPKEEWV INPLLVGFGQ ICTPIRPRC CSVS
Sbjct: 294 LGWVSRPGTKQKTTSPEETRVALQQWLPKEEWVAINPLLVGFGQMICTPIRPRCEACSVS 353
Query: 121 ELCP 124
+LCP
Sbjct: 354 KLCP 357
>TAIR|locus:2198738 [details] [associations]
symbol:NTH2 "endonuclease III 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0004519
"endonuclease activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005739 "mitochondrion" evidence=ISM] [GO:0006281
"DNA repair" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA;ISS;IDA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=IEA] [GO:0019104 "DNA N-glycosylase activity"
evidence=IDA] [GO:0042644 "chloroplast nucleoid" evidence=IDA]
InterPro:IPR000445 InterPro:IPR003265 InterPro:IPR003583
InterPro:IPR003651 InterPro:IPR004036 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 PROSITE:PS01155 SMART:SM00278
SMART:SM00478 SMART:SM00525 EMBL:CP002684 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 GO:GO:0051539 GO:GO:0004519
GO:GO:0042644 GO:GO:0019104 KO:K10773 EMBL:AK316958 IPI:IPI00534650
RefSeq:NP_973767.1 UniGene:At.26529 ProteinModelPortal:B9DFZ0
PRIDE:B9DFZ0 EnsemblPlants:AT1G05900.2 GeneID:837100
KEGG:ath:AT1G05900 TAIR:At1g05900 OMA:CGINNIC PhylomeDB:B9DFZ0
Genevestigator:Q3EDI2 Uniprot:B9DFZ0
Length = 386
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 94/124 (75%), Positives = 110/124 (88%)
Query: 1 MKKIAPICLTKYDGDIPSSLDELLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNR 60
+KK+A ICL +YDGDIP +L+ELL LPG+GPK+AHLV++V WN+VQGICVDTHVHRICNR
Sbjct: 241 VKKVAKICLMEYDGDIPRTLEELLSLPGVGPKIAHLVLHVAWNDVQGICVDTHVHRICNR 300
Query: 61 LGWVSQPGRKQKTSSPEQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRCGMCSVS 120
LGWVS+PG KQKTSSPE+TR LQ WLPK EWV IN LLVGFGQTICTP+RP CG CS++
Sbjct: 301 LGWVSKPGTKQKTSSPEETRVALQQWLPKGEWVAINFLLVGFGQTICTPLRPHCGTCSIT 360
Query: 121 ELCP 124
E+CP
Sbjct: 361 EICP 364
>DICTYBASE|DDB_G0277247 [details] [associations]
symbol:apnB "putative endonuclease III" species:44689
"Dictyostelium discoideum" [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0004519
"endonuclease activity" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000445 InterPro:IPR003265 InterPro:IPR003651
InterPro:IPR004035 InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730
PROSITE:PS00764 SMART:SM00478 SMART:SM00525 dictyBase:DDB_G0277247
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677
GenomeReviews:CM000151_GR GO:GO:0051539 GO:GO:0004519
EMBL:AAFI02000019 eggNOG:COG0177 KO:K10773 OMA:CSECLNK
RefSeq:XP_642760.1 ProteinModelPortal:Q86K43 STRING:Q86K43
EnsemblProtists:DDB0232975 GeneID:8620949 KEGG:ddi:DDB_G0277247
InParanoid:Q86K43 ProtClustDB:CLSZ2846854 Uniprot:Q86K43
Length = 349
Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 68/124 (54%), Positives = 87/124 (70%)
Query: 1 MKKIAPICLTKYDGDIPSSLDELLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNR 60
+KKIA I KY+GDIP + E+ LPGIGPKM +L++ + W V+GI VD H+HRI NR
Sbjct: 214 LKKIAEILKNKYNGDIPPTFKEIEQLPGIGPKMTNLIVQIAWGRVEGIAVDVHMHRISNR 273
Query: 61 LGWVSQPGRKQKTSSPEQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRCGMCSVS 120
LGWV KT +PE+T + L+ WLPKE W +N LLVGFGQTIC+P+ P+C C V+
Sbjct: 274 LGWV-------KTKTPEETMKDLESWLPKENWATVNHLLVGFGQTICSPVNPKCSNCLVN 326
Query: 121 ELCP 124
LCP
Sbjct: 327 NLCP 330
>UNIPROTKB|Q2KID2 [details] [associations]
symbol:NTHL1 "Endonuclease III-like protein 1" species:9913
"Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0019104
"DNA N-glycosylase activity" evidence=IEA] [GO:0006296
"nucleotide-excision repair, DNA incision, 5'-to lesion"
evidence=IEA] [GO:0006285 "base-excision repair, AP site formation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=IEA] [GO:0003906
"DNA-(apurinic or apyrimidinic site) lyase activity" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0004519
"endonuclease activity" evidence=IEA] InterPro:IPR000445
InterPro:IPR003265 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730
PROSITE:PS00764 PROSITE:PS01155 SMART:SM00478 SMART:SM00525
GO:GO:0005739 GO:GO:0005634 GO:GO:0046872 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0051539 GO:GO:0003690 GO:GO:0004519 GO:GO:0003906
eggNOG:COG0177 GO:GO:0019104 KO:K10773 GO:GO:0006296 GO:GO:0006285
GeneTree:ENSGT00510000047513 HOGENOM:HOG000252209 OMA:CLNQALC
EMBL:BC112681 IPI:IPI00689580 RefSeq:NP_001039862.1 UniGene:Bt.6550
ProteinModelPortal:Q2KID2 STRING:Q2KID2 PRIDE:Q2KID2
Ensembl:ENSBTAT00000049780 GeneID:535203 KEGG:bta:535203 CTD:4913
HOVERGEN:HBG052675 InParanoid:Q2KID2 OrthoDB:EOG4933JH
NextBio:20876660 Uniprot:Q2KID2
Length = 305
Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 72/124 (58%), Positives = 84/124 (67%)
Query: 1 MKKIAPICLTKYDGDIPSSLDELLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNR 60
+K+ + I +YDGDIP+S+ EL+ LPG+GPKMAHL M V W V GI VDTHVHRI NR
Sbjct: 182 IKQTSAILQQRYDGDIPASVAELVALPGVGPKMAHLAMAVAWGTVSGIAVDTHVHRIANR 241
Query: 61 LGWVSQPGRKQKTSSPEQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRCGMCSVS 120
L W K+ T SPE+TR L+ WLP+E W IN LLVGFGQ C PIRPRC C
Sbjct: 242 LRWT-----KKATKSPEETRRALEEWLPRELWSEINGLLVGFGQQTCLPIRPRCQACLNR 296
Query: 121 ELCP 124
LCP
Sbjct: 297 ALCP 300
>UNIPROTKB|E2QX23 [details] [associations]
symbol:NTHL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019104 "DNA N-glycosylase activity"
evidence=IEA] [GO:0006296 "nucleotide-excision repair, DNA
incision, 5'-to lesion" evidence=IEA] [GO:0006285 "base-excision
repair, AP site formation" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003906 "DNA-(apurinic or apyrimidinic site) lyase activity"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0004519 "endonuclease activity" evidence=IEA]
InterPro:IPR000445 InterPro:IPR003265 InterPro:IPR003651
InterPro:IPR004035 InterPro:IPR004036 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 PROSITE:PS00764 PROSITE:PS01155
SMART:SM00478 SMART:SM00525 GO:GO:0005739 GO:GO:0005634
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0051539 GO:GO:0003690 GO:GO:0004519
GO:GO:0003906 GO:GO:0019104 KO:K10773 GO:GO:0006296 GO:GO:0006285
GeneTree:ENSGT00510000047513 OMA:CLNQALC CTD:4913 EMBL:AAEX03004629
RefSeq:XP_853674.1 Ensembl:ENSCAFT00000030911 GeneID:610981
KEGG:cfa:610981 Uniprot:E2QX23
Length = 312
Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 70/124 (56%), Positives = 84/124 (67%)
Query: 1 MKKIAPICLTKYDGDIPSSLDELLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNR 60
+K+ + I +Y GDIP+S+ EL+ LPG+GPKMAHL M V W V GI VDTHVHRI NR
Sbjct: 189 IKQTSAILQQRYGGDIPASVAELVALPGVGPKMAHLAMAVAWGTVSGIAVDTHVHRIANR 248
Query: 61 LGWVSQPGRKQKTSSPEQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRCGMCSVS 120
L W + T+SPE+TR L+ WLP+E W IN LLVGFGQ C P+RPRCG C
Sbjct: 249 LRWT-----RTTTTSPEKTRAALEEWLPRELWGEINGLLVGFGQQTCLPVRPRCGACLNR 303
Query: 121 ELCP 124
LCP
Sbjct: 304 SLCP 307
>UNIPROTKB|F1NQP6 [details] [associations]
symbol:NTHL1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0003690 "double-stranded DNA binding" evidence=IEA] [GO:0003906
"DNA-(apurinic or apyrimidinic site) lyase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0006285 "base-excision repair, AP site formation"
evidence=IEA] [GO:0006296 "nucleotide-excision repair, DNA
incision, 5'-to lesion" evidence=IEA] [GO:0019104 "DNA
N-glycosylase activity" evidence=IEA] InterPro:IPR000445
InterPro:IPR003265 InterPro:IPR003583 InterPro:IPR003651
InterPro:IPR004035 InterPro:IPR004036 InterPro:IPR005759
InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730 PIRSF:PIRSF001435
PROSITE:PS00764 PROSITE:PS01155 SMART:SM00278 SMART:SM00478
SMART:SM00525 GO:GO:0005739 GO:GO:0005634 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0051539 GO:GO:0003690 GO:GO:0004519 GO:GO:0003906
GO:GO:0019104 GO:GO:0006296 GO:GO:0006285
GeneTree:ENSGT00510000047513 OMA:CLNQALC EMBL:AADN02023662
IPI:IPI00602448 Ensembl:ENSGALT00000009013 ArrayExpress:F1NQP6
Uniprot:F1NQP6
Length = 251
Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 68/124 (54%), Positives = 86/124 (69%)
Query: 1 MKKIAPICLTKYDGDIPSSLDELLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNR 60
+K+ I KY GDIP +++EL+ LPG+GPKMAHL MN+ WN+V GI VDTHVHRI NR
Sbjct: 128 IKQTTAILKQKYGGDIPGTVEELVKLPGVGPKMAHLAMNIAWNSVSGIAVDTHVHRITNR 187
Query: 61 LGWVSQPGRKQKTSSPEQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRCGMCSVS 120
L WV K++T PE+TR L+ WLP++ W IN LLVGFGQ C P+ PRC C
Sbjct: 188 LKWV-----KKETRYPEETRVALEDWLPRDLWREINWLLVGFGQQTCLPVNPRCKECLNQ 242
Query: 121 ELCP 124
++CP
Sbjct: 243 DICP 246
>FB|FBgn0032907 [details] [associations]
symbol:CG9272 species:7227 "Drosophila melanogaster"
[GO:0006281 "DNA repair" evidence=ISS] [GO:0000703 "oxidized
pyrimidine nucleobase lesion DNA N-glycosylase activity"
evidence=ISS] [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004036 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 PROSITE:PS01155 SMART:SM00478
SMART:SM00525 EMBL:AE014134 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0003677 GO:GO:0006974 GO:GO:0051539 GO:GO:0004519 KO:K10773
GeneTree:ENSGT00510000047513 RefSeq:NP_610078.2
ProteinModelPortal:Q9VIH0 SMR:Q9VIH0 IntAct:Q9VIH0 STRING:Q9VIH0
EnsemblMetazoa:FBtr0089944 GeneID:35365 KEGG:dme:Dmel_CG9272
UCSC:CG9272-RA FlyBase:FBgn0032907 InParanoid:Q9VIH0 OMA:QTICTPV
OrthoDB:EOG4ZGMV5 PhylomeDB:Q9VIH0 GenomeRNAi:35365 NextBio:793173
ArrayExpress:Q9VIH0 Bgee:Q9VIH0 Uniprot:Q9VIH0
Length = 388
Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
Identities = 65/124 (52%), Positives = 82/124 (66%)
Query: 1 MKKIAPICLTKYDGDIPSSLDELLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNR 60
+K+ I KY DIP ++ +L+ LPG+GPKMAH+ M V WN + GI VD HVHR+ NR
Sbjct: 256 LKQTVEILTDKYGSDIPDNVKDLVALPGVGPKMAHICMAVAWNKITGIGVDVHVHRLSNR 315
Query: 61 LGWVSQPGRKQKTSSPEQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRCGMCSVS 120
LGWV +P T PEQTR L+ WLP W +N L VGFGQTICTP++P CG C
Sbjct: 316 LGWVPKP-----TKEPEQTRVALEKWLPFSLWSEVNHLFVGFGQTICTPVKPNCGECLNK 370
Query: 121 ELCP 124
++CP
Sbjct: 371 DICP 374
>WB|WBGene00011201 [details] [associations]
symbol:nth-1 species:6239 "Caenorhabditis elegans"
[GO:0006281 "DNA repair" evidence=IEA;IMP] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA] [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0000703 "oxidized pyrimidine nucleobase lesion DNA
N-glycosylase activity" evidence=IDA] [GO:0045008
"depyrimidination" evidence=IDA] [GO:0034042 "5-formyluracil DNA
N-glycosylase activity" evidence=IDA] [GO:0034043
"5-hydroxymethyluracil DNA N-glycosylase activity" evidence=IDA]
[GO:0070301 "cellular response to hydrogen peroxide" evidence=IGI]
[GO:0005634 "nucleus" evidence=ISS] InterPro:IPR000445
InterPro:IPR003265 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730
PROSITE:PS00764 PROSITE:PS01155 SMART:SM00478 SMART:SM00525
GO:GO:0005634 GO:GO:0070301 GO:GO:0046872 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0003677 GO:GO:0051539 GO:GO:0004519 GO:GO:0045008
eggNOG:COG0177 EMBL:Z50874 GeneTree:ENSGT00510000047513
HOGENOM:HOG000252209 EMBL:AB518695 PIR:T24131 RefSeq:NP_001254906.1
RefSeq:NP_001254907.1 RefSeq:NP_001254908.1 RefSeq:NP_001254909.1
UniGene:Cel.10201 ProteinModelPortal:P54137 SMR:P54137
STRING:P54137 EnsemblMetazoa:R10E4.5d GeneID:187770
KEGG:cel:CELE_R10E4.5 CTD:187770 WormBase:R10E4.5a
WormBase:R10E4.5b WormBase:R10E4.5c WormBase:R10E4.5d
InParanoid:P54137 OMA:CLNQALC NextBio:936446 ArrayExpress:P54137
GO:GO:0034042 GO:GO:0034043 Uniprot:P54137
Length = 298
Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
Identities = 69/124 (55%), Positives = 84/124 (67%)
Query: 1 MKKIAPICLTKYDGDIPSSLDELLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNR 60
++K A I + GDIP SLD L LPG+GPKMA+LVM + W GI VDTHVHRI NR
Sbjct: 127 LQKTAKILKDDFSGDIPDSLDGLCALPGVGPKMANLVMQIAWGECVGIAVDTHVHRISNR 186
Query: 61 LGWVSQPGRKQKTSSPEQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRCGMCSVS 120
LGW+ KTS+PE+T++ L++ LPK EW PIN LLVGFGQ C P+RP+CG C
Sbjct: 187 LGWI-------KTSTPEKTQKALEILLPKSEWQPINHLLVGFGQMQCQPVRPKCGTCLCR 239
Query: 121 ELCP 124
CP
Sbjct: 240 FTCP 243
>UNIPROTKB|F1RFB3 [details] [associations]
symbol:NTHL1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019104 "DNA N-glycosylase activity" evidence=IEA]
[GO:0006296 "nucleotide-excision repair, DNA incision, 5'-to
lesion" evidence=IEA] [GO:0006285 "base-excision repair, AP site
formation" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003906 "DNA-(apurinic or
apyrimidinic site) lyase activity" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=IEA] [GO:0051539 "4 iron, 4
sulfur cluster binding" evidence=IEA] [GO:0004519 "endonuclease
activity" evidence=IEA] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004035 InterPro:IPR004036
InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730 PROSITE:PS00764
PROSITE:PS01155 SMART:SM00478 SMART:SM00525 GO:GO:0005739
GO:GO:0005634 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0051539 GO:GO:0003690
GO:GO:0004519 GO:GO:0003906 GO:GO:0019104 GO:GO:0006296
GO:GO:0006285 GeneTree:ENSGT00510000047513 OMA:CLNQALC
EMBL:FP102350 Ensembl:ENSSSCT00000008810 Uniprot:F1RFB3
Length = 313
Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 69/124 (55%), Positives = 82/124 (66%)
Query: 1 MKKIAPICLTKYDGDIPSSLDELLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNR 60
+K+ + I +Y GDIP+S+ EL+ LPG+GPKMAHL M V W V GI VDTHVHRI R
Sbjct: 190 IKQTSAILQQRYGGDIPASVPELVALPGVGPKMAHLAMAVAWGTVSGIAVDTHVHRIAGR 249
Query: 61 LGWVSQPGRKQKTSSPEQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRCGMCSVS 120
L W K+ T SPE+TR L+ WLP+E W IN LLVGFGQ C P+RPRC C
Sbjct: 250 LKWT-----KKATKSPEKTRTALEEWLPRELWSEINGLLVGFGQQTCLPVRPRCQACLNR 304
Query: 121 ELCP 124
LCP
Sbjct: 305 ALCP 308
>RGD|1309289 [details] [associations]
symbol:Nthl1 "nth (endonuclease III)-like 1 (E.coli)"
species:10116 "Rattus norvegicus" [GO:0003690 "double-stranded DNA
binding" evidence=IEA;ISO] [GO:0003906 "DNA-(apurinic or
apyrimidinic site) lyase activity" evidence=IEA;ISO] [GO:0004519
"endonuclease activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0006285 "base-excision repair, AP site formation"
evidence=IEA;ISO] [GO:0006296 "nucleotide-excision repair, DNA
incision, 5'-to lesion" evidence=IEA;ISO] [GO:0019104 "DNA
N-glycosylase activity" evidence=IEA;ISO] [GO:0051539 "4 iron, 4
sulfur cluster binding" evidence=IEA] InterPro:IPR000445
InterPro:IPR003265 InterPro:IPR003651 InterPro:IPR004036
InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730 PROSITE:PS01155
SMART:SM00478 SMART:SM00525 RGD:1309289 GO:GO:0005739 GO:GO:0005634
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0051539 GO:GO:0003690 GO:GO:0004519
GO:GO:0003906 EMBL:CH473948 GO:GO:0019104 KO:K10773 GO:GO:0006296
GO:GO:0006285 GeneTree:ENSGT00510000047513 OMA:CLNQALC CTD:4913
OrthoDB:EOG4933JH IPI:IPI00189546 RefSeq:NP_001099198.1
UniGene:Rn.14632 Ensembl:ENSRNOT00000016490 GeneID:29541
KEGG:rno:29541 UCSC:RGD:1309289 NextBio:609539 Uniprot:D4A4E8
Length = 300
Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 69/124 (55%), Positives = 82/124 (66%)
Query: 1 MKKIAPICLTKYDGDIPSSLDELLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNR 60
+K+ I +Y+GDIP+S+ EL+ LPG+GPKMAHL M V W V GI VDTHVHRI NR
Sbjct: 177 IKQTTAILQQRYEGDIPASVAELVALPGVGPKMAHLAMAVAWGTVSGIAVDTHVHRIANR 236
Query: 61 LGWVSQPGRKQKTSSPEQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRCGMCSVS 120
L W K+ T SPE+TR L+ WLP+ W IN LLVGFGQ IC P+ PRC C
Sbjct: 237 LKWT-----KKMTKSPEETRRNLEEWLPRVLWSEINGLLVGFGQQICLPVHPRCQACLNK 291
Query: 121 ELCP 124
LCP
Sbjct: 292 ALCP 295
>UNIPROTKB|P78549 [details] [associations]
symbol:NTHL1 "Endonuclease III-like protein 1" species:9606
"Homo sapiens" [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051539 "4 iron,
4 sulfur cluster binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0006296 "nucleotide-excision repair, DNA
incision, 5'-to lesion" evidence=IDA] [GO:0003906 "DNA-(apurinic or
apyrimidinic site) lyase activity" evidence=IDA] [GO:0019104 "DNA
N-glycosylase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0006285 "base-excision repair, AP site formation"
evidence=IDA;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006281 "DNA repair"
evidence=TAS] [GO:0006284 "base-excision repair" evidence=TAS]
[GO:0045008 "depyrimidination" evidence=TAS] Reactome:REACT_216
InterPro:IPR000445 InterPro:IPR003265 InterPro:IPR003651
InterPro:IPR004036 InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730
PROSITE:PS00764 PROSITE:PS01155 SMART:SM00478 SMART:SM00525
GO:GO:0005739 GO:GO:0005654 GO:GO:0046872 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0051539 GO:GO:0003690 GO:GO:0004519 GO:GO:0003906
BRENDA:4.2.99.18 GO:GO:0045008 eggNOG:COG0177 GO:GO:0019104
KO:K10773 GO:GO:0006296 EMBL:AB014460 EMBL:AC005600
HOGENOM:HOG000252209 OMA:CLNQALC CTD:4913 HOVERGEN:HBG052675
OrthoDB:EOG4933JH EMBL:U79718 EMBL:AF498098 EMBL:AB001575
EMBL:U81285 EMBL:BC003014 EMBL:BC000391 EMBL:Y09687 IPI:IPI00001722
RefSeq:NP_002519.1 UniGene:Hs.66196 ProteinModelPortal:P78549
SMR:P78549 STRING:P78549 PhosphoSite:P78549 DMDM:29840795
PaxDb:P78549 PRIDE:P78549 Ensembl:ENST00000219066 GeneID:4913
KEGG:hsa:4913 UCSC:uc002col.1 GeneCards:GC16M002089 HGNC:HGNC:8028
HPA:CAB025152 MIM:602656 neXtProt:NX_P78549 PharmGKB:PA31811
InParanoid:P78549 PhylomeDB:P78549 GenomeRNAi:4913 NextBio:18903
ArrayExpress:P78549 Bgee:P78549 CleanEx:HS_NTHL1
Genevestigator:P78549 GermOnline:ENSG00000065057 Uniprot:P78549
Length = 312
Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 69/124 (55%), Positives = 81/124 (65%)
Query: 1 MKKIAPICLTKYDGDIPSSLDELLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNR 60
+K+ + I Y GDIP+S+ EL+ LPG+GPKMAHL M V W V GI VDTHVHRI NR
Sbjct: 189 IKQTSAILQQHYGGDIPASVAELVALPGVGPKMAHLAMAVAWGTVSGIAVDTHVHRIANR 248
Query: 61 LGWVSQPGRKQKTSSPEQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRCGMCSVS 120
L W K+ T SPE+TR L+ WLP+E W IN LLVGFGQ C P+ PRC C
Sbjct: 249 LRWT-----KKATKSPEETRAALEEWLPRELWHEINGLLVGFGQQTCLPVHPRCHACLNQ 303
Query: 121 ELCP 124
LCP
Sbjct: 304 ALCP 307
>MGI|MGI:1313275 [details] [associations]
symbol:Nthl1 "nth (endonuclease III)-like 1 (E.coli)"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=ISO] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0003906 "DNA-(apurinic or apyrimidinic site) lyase activity"
evidence=ISO;IDA] [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006284
"base-excision repair" evidence=IEA] [GO:0006285 "base-excision
repair, AP site formation" evidence=ISO] [GO:0006296
"nucleotide-excision repair, DNA incision, 5'-to lesion"
evidence=ISO;IDA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016798
"hydrolase activity, acting on glycosyl bonds" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0019104 "DNA
N-glycosylase activity" evidence=ISO;IDA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004036 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 PROSITE:PS00764 PROSITE:PS01155
SMART:SM00478 SMART:SM00525 MGI:MGI:1313275 GO:GO:0005739
GO:GO:0005634 GO:GO:0046872 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0003677 GO:GO:0051539 GO:GO:0004519 GO:GO:0003906
BRENDA:4.2.99.18 eggNOG:COG0177 GO:GO:0019104 GO:GO:0006296
HOGENOM:HOG000252209 HOVERGEN:HBG052675 OrthoDB:EOG4933JH
EMBL:AB006812 EMBL:AB009371 EMBL:AJ001617 EMBL:Y09688 EMBL:AK033701
IPI:IPI00136370 UniGene:Mm.148315 ProteinModelPortal:O35980
SMR:O35980 STRING:O35980 PhosphoSite:O35980 PRIDE:O35980
InParanoid:O35980 ChiTaRS:NTHL1 CleanEx:MM_NTHL1
Genevestigator:O35980 GermOnline:ENSMUSG00000041429 Uniprot:O35980
Length = 300
Score = 360 (131.8 bits), Expect = 5.2e-33, P = 5.2e-33
Identities = 66/124 (53%), Positives = 83/124 (66%)
Query: 1 MKKIAPICLTKYDGDIPSSLDELLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNR 60
+K+ I +Y+GDIP+S+ EL+ LPG+GPKMAHL M V W + GI VDTHVHRI NR
Sbjct: 177 IKQTTAILQQRYEGDIPASVAELVALPGVGPKMAHLAMAVAWGTISGIAVDTHVHRIANR 236
Query: 61 LGWVSQPGRKQKTSSPEQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRCGMCSVS 120
L W K+ T +PE+TR+ L+ WLP+ W +N LLVGFGQ IC P+ PRC C
Sbjct: 237 LRWT-----KKMTKTPEETRKNLEEWLPRVLWSEVNGLLVGFGQQICLPVHPRCQACLNK 291
Query: 121 ELCP 124
LCP
Sbjct: 292 ALCP 295
>ZFIN|ZDB-GENE-120511-4 [details] [associations]
symbol:nthl1 "nth endonuclease III-like 1 (E. coli)"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
InterPro:IPR000445 InterPro:IPR003265 InterPro:IPR003651
InterPro:IPR004036 InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730
PROSITE:PS01155 SMART:SM00478 SMART:SM00525 ZFIN:ZDB-GENE-120511-4
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677 GO:GO:0051539
GO:GO:0004519 GeneTree:ENSGT00510000047513 EMBL:CABZ01067150
EMBL:CABZ01067151 IPI:IPI00628612 Ensembl:ENSDART00000062941
Bgee:F1QBP9 Uniprot:F1QBP9
Length = 402
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 62/124 (50%), Positives = 85/124 (68%)
Query: 1 MKKIAPICLTKYDGDIPSSLDELLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNR 60
+K+ + ++ GDIP++++ L+ LPG+GPKMAHL M++ WN V GI VDTHVHRI NR
Sbjct: 199 IKQATALIQQEFGGDIPNTVEGLIRLPGVGPKMAHLAMDIAWNQVSGIGVDTHVHRISNR 258
Query: 61 LGWVSQPGRKQKTSSPEQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRCGMCSVS 120
LGW K++T +PE+TR L+ WLP++ W IN LLVGFGQ +C P+ P C +C
Sbjct: 259 LGWT-----KKETKTPEETRRALEEWLPRDLWSEINWLLVGFGQQVCLPVGPLCSVCLNQ 313
Query: 121 ELCP 124
CP
Sbjct: 314 HTCP 317
>UNIPROTKB|H3BPD5 [details] [associations]
symbol:NTHL1 "Endonuclease III-like protein 1" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004519
"endonuclease activity" evidence=IEA] [GO:0006284 "base-excision
repair" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=IEA] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004036 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 PROSITE:PS01155 SMART:SM00478
SMART:SM00525 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677 GO:GO:0051539
GO:GO:0004519 HGNC:HGNC:8028 EMBL:AC093513 Ensembl:ENST00000566380
Uniprot:H3BPD5
Length = 236
Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 69/125 (55%), Positives = 81/125 (64%)
Query: 1 MKKIAPICLTKYDGDIPSSLDELLLLPGIGPKMAHLVMNVGWNNVQGIC-VDTHVHRICN 59
+K+ + I Y GDIP+S+ EL+ LPG+GPKMAHL M V W V GI VDTHVHRI N
Sbjct: 112 IKQTSAILQQHYGGDIPASVAELVALPGVGPKMAHLAMAVAWGTVSGIAAVDTHVHRIAN 171
Query: 60 RLGWVSQPGRKQKTSSPEQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRCGMCSV 119
RL W K+ T SPE+TR L+ WLP+E W IN LLVGFGQ C P+ PRC C
Sbjct: 172 RLRWT-----KKATKSPEETRAALEEWLPRELWHEINGLLVGFGQQTCLPVHPRCHACLN 226
Query: 120 SELCP 124
LCP
Sbjct: 227 QALCP 231
>POMBASE|SPAC30D11.07 [details] [associations]
symbol:nth1 "DNA endonuclease III" species:4896
"Schizosaccharomyces pombe" [GO:0000703 "oxidized pyrimidine
nucleobase lesion DNA N-glycosylase activity" evidence=IMP]
[GO:0003677 "DNA binding" evidence=ISM] [GO:0004519 "endonuclease
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005759 "mitochondrial matrix" evidence=ISS] [GO:0006285
"base-excision repair, AP site formation" evidence=IMP;IDA]
[GO:0008534 "oxidized purine nucleobase lesion DNA N-glycosylase
activity" evidence=IMP] [GO:0034039 "8-oxo-7,8-dihydroguanine DNA
N-glycosylase activity" evidence=IDA] [GO:0034042 "5-formyluracil
DNA N-glycosylase activity" evidence=IDA] [GO:0034043
"5-hydroxymethyluracil DNA N-glycosylase activity" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051539 "4 iron,
4 sulfur cluster binding" evidence=IEA] InterPro:IPR000445
InterPro:IPR003265 InterPro:IPR003651 InterPro:IPR004036
InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730 PROSITE:PS00764
PROSITE:PS01155 SMART:SM00478 SMART:SM00525 PomBase:SPAC30D11.07
GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0005759
GO:GO:0046872 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677 GO:GO:0051539
GO:GO:0004519 eggNOG:COG0177 KO:K10773 GO:GO:0034039 GO:GO:0006285
HOGENOM:HOG000252209 OrthoDB:EOG4T1MWS GO:GO:0034042 GO:GO:0034043
EMBL:AB191154 PIR:JC6066 RefSeq:NP_593210.1
ProteinModelPortal:Q09907 STRING:Q09907 EnsemblFungi:SPAC30D11.07.1
GeneID:2543510 KEGG:spo:SPAC30D11.07 OMA:CSECLNK NextBio:20804520
Uniprot:Q09907
Length = 355
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 65/126 (51%), Positives = 83/126 (65%)
Query: 1 MKKIAPICLTKYDGDIPSSLDELLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNR 60
+K++A I K+ GDIP ++++L+ LPG+GPKM +L M++ WN GI VD HVHRICN
Sbjct: 111 LKQMARILSEKFQGDIPDTVEDLMTLPGVGPKMGYLCMSIAWNKTVGIGVDVHVHRICNL 170
Query: 61 LGWVSQPGRKQKTSSPEQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRCGMCSVS 120
L W + T + EQTR LQ WLPKE W +N LVGFGQTIC P RC MC++S
Sbjct: 171 LHWCN-------TKTEEQTRAALQSWLPKELWFELNHTLVGFGQTICLPRGRRCDMCTLS 223
Query: 121 E--LCP 124
LCP
Sbjct: 224 SKGLCP 229
>CGD|CAL0001822 [details] [associations]
symbol:NTG1 species:5476 "Candida albicans" [GO:0000703
"oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity"
evidence=ISA] [GO:0006285 "base-excision repair, AP site formation"
evidence=IEA;ISA] [GO:0005634 "nucleus" evidence=IEA] [GO:0034043
"5-hydroxymethyluracil DNA N-glycosylase activity" evidence=IEA]
[GO:0034039 "8-oxo-7,8-dihydroguanine DNA N-glycosylase activity"
evidence=IEA] [GO:0034042 "5-formyluracil DNA N-glycosylase
activity" evidence=IEA] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR004036 InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730
PROSITE:PS01155 SMART:SM00478 CGD:CAL0001822 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0003677 EMBL:AACQ01000053 EMBL:AACQ01000052 GO:GO:0004519
eggNOG:COG0177 KO:K10773 GO:GO:0000703 GO:GO:0006285
RefSeq:XP_717561.1 RefSeq:XP_717635.1 ProteinModelPortal:Q5A763
STRING:Q5A763 GeneID:3640746 GeneID:3640793 KEGG:cal:CaO19.12564
KEGG:cal:CaO19.5098 Uniprot:Q5A763
Length = 320
Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 57/125 (45%), Positives = 80/125 (64%)
Query: 1 MKKIAPICLTKYDGDIPSSLDELLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNR 60
++K I + +DGDIP +++E++ LPG+GPKM L++ GW GI VD H+HR+
Sbjct: 166 IRKTCSILMENHDGDIPKTIEEIVALPGVGPKMGFLLLQSGWGINAGIGVDVHLHRLALM 225
Query: 61 LGWVSQPGRKQKTSSPEQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRCGMCSVS 120
GWVS P K ++PE+ R LQ WLPK+ W INPL+VGFGQ IC P C +C+++
Sbjct: 226 WGWVS-P----KANTPEKARIELQEWLPKDYWTDINPLVVGFGQVICVPRAANCDICTLA 280
Query: 121 E--LC 123
LC
Sbjct: 281 RDGLC 285
>UNIPROTKB|Q5A763 [details] [associations]
symbol:NTG1 "Putative uncharacterized protein NTG1"
species:237561 "Candida albicans SC5314" [GO:0000703 "oxidized
pyrimidine nucleobase lesion DNA N-glycosylase activity"
evidence=ISA] [GO:0006285 "base-excision repair, AP site formation"
evidence=ISA] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR004036 InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730
PROSITE:PS01155 SMART:SM00478 CGD:CAL0001822 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0003677 EMBL:AACQ01000053 EMBL:AACQ01000052 GO:GO:0004519
eggNOG:COG0177 KO:K10773 GO:GO:0000703 GO:GO:0006285
RefSeq:XP_717561.1 RefSeq:XP_717635.1 ProteinModelPortal:Q5A763
STRING:Q5A763 GeneID:3640746 GeneID:3640793 KEGG:cal:CaO19.12564
KEGG:cal:CaO19.5098 Uniprot:Q5A763
Length = 320
Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 57/125 (45%), Positives = 80/125 (64%)
Query: 1 MKKIAPICLTKYDGDIPSSLDELLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNR 60
++K I + +DGDIP +++E++ LPG+GPKM L++ GW GI VD H+HR+
Sbjct: 166 IRKTCSILMENHDGDIPKTIEEIVALPGVGPKMGFLLLQSGWGINAGIGVDVHLHRLALM 225
Query: 61 LGWVSQPGRKQKTSSPEQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRCGMCSVS 120
GWVS P K ++PE+ R LQ WLPK+ W INPL+VGFGQ IC P C +C+++
Sbjct: 226 WGWVS-P----KANTPEKARIELQEWLPKDYWTDINPLVVGFGQVICVPRAANCDICTLA 280
Query: 121 E--LC 123
LC
Sbjct: 281 RDGLC 285
>SGD|S000005403 [details] [associations]
symbol:NTG2 "DNA N-glycosylase and apurinic/apyrimidinic (AP)
lyase" species:4932 "Saccharomyces cerevisiae" [GO:0003906
"DNA-(apurinic or apyrimidinic site) lyase activity" evidence=IDA]
[GO:0006284 "base-excision repair" evidence=IEA;IDA] [GO:0006285
"base-excision repair, AP site formation" evidence=IDA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0000703 "oxidized pyrimidine
nucleobase lesion DNA N-glycosylase activity" evidence=ISS;IDA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0016798 "hydrolase activity, acting on glycosyl
bonds" evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0004519
"endonuclease activity" evidence=IEA] InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004036 InterPro:IPR011257
Pfam:PF00730 PROSITE:PS00764 PROSITE:PS01155 SMART:SM00478
SMART:SM00525 SGD:S000005403 GO:GO:0005634 EMBL:BK006948
GO:GO:0046872 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0051539 GO:GO:0004519
eggNOG:COG0177 KO:K10773 GO:GO:0000703 GO:GO:0006285
GeneTree:ENSGT00510000047513 HOGENOM:HOG000252209 EMBL:Z74785
PIR:S66728 RefSeq:NP_014599.1 ProteinModelPortal:Q08214 SMR:Q08214
DIP:DIP-2956N IntAct:Q08214 MINT:MINT-570318 STRING:Q08214
PeptideAtlas:Q08214 EnsemblFungi:YOL043C GeneID:854114
KEGG:sce:YOL043C CYGD:YOL043c OMA:CDLCLAN OrthoDB:EOG4T1MWS
NextBio:975807 Genevestigator:Q08214 GermOnline:YOL043C
Uniprot:Q08214
Length = 380
Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 56/123 (45%), Positives = 77/123 (62%)
Query: 1 MKKIAPICLTKYDGDIPSSLDELLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNR 60
+K+ A + + +D DIP ++ +L LPG+GPKM +L + GW + GICVD HVHR+C
Sbjct: 217 IKRTAQLLVDNFDSDIPYDIEGILSLPGVGPKMGYLTLQKGWGLIAGICVDVHVHRLCKM 276
Query: 61 LGWVSQPGRKQKTSSPEQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRCGMCSVS 120
WV P K KT+ E TR+ LQ+WLP W IN +LVGFGQ IC RC +C +
Sbjct: 277 WNWVD-P-IKCKTA--EHTRKELQVWLPHSLWYEINTVLVGFGQLICMARGKRCDLCLAN 332
Query: 121 ELC 123
++C
Sbjct: 333 DVC 335
>TIGR_CMR|GSU_1450 [details] [associations]
symbol:GSU_1450 "endonuclease III, putative"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003906
"DNA-(apurinic or apyrimidinic site) lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004035 InterPro:IPR005759
InterPro:IPR011257 Pfam:PF00730 Pfam:PF10576 PIRSF:PIRSF001435
PROSITE:PS00764 SMART:SM00478 SMART:SM00525 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0051539 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0004519 GO:GO:0016798 KO:K10773
HOGENOM:HOG000252209 RefSeq:NP_952501.2 GeneID:2687781
KEGG:gsu:GSU1450 PATRIC:22025743 ProtClustDB:CLSK2306769
BioCyc:GSUL243231:GH27-1429-MONOMER Uniprot:Q74D69
Length = 218
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 57/121 (47%), Positives = 76/121 (62%)
Query: 3 KIAPICLTKYDGDIPSSLDELLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNRLG 62
+I + L +YDG +P LDELL G+G K A+LV+ +G+ GICVDTHVHRICNR G
Sbjct: 97 EICRVLLERYDGGVPDELDELLAFKGVGRKTANLVITLGFGK-PGICVDTHVHRICNRWG 155
Query: 63 WVSQPGRKQKTSSPEQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRCGMCSVSEL 122
++ +T +PEQT L+ LP W+ IN LV FGQ CTP+ PRC C +++
Sbjct: 156 YI-------RTKTPEQTEFSLRRILPHRYWLVINDYLVTFGQNHCTPVSPRCSTCVLAQW 208
Query: 123 C 123
C
Sbjct: 209 C 209
>SGD|S000000013 [details] [associations]
symbol:NTG1 "DNA N-glycosylase and apurinic/apyrimidinic (AP)
lyase" species:4932 "Saccharomyces cerevisiae" [GO:0006284
"base-excision repair" evidence=IEA;IDA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0008534 "oxidized purine
nucleobase lesion DNA N-glycosylase activity" evidence=IDA]
[GO:0000703 "oxidized pyrimidine nucleobase lesion DNA
N-glycosylase activity" evidence=ISS;IDA] [GO:0006281 "DNA repair"
evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016798 "hydrolase activity,
acting on glycosyl bonds" evidence=IEA] [GO:0003906 "DNA-(apurinic
or apyrimidinic site) lyase activity" evidence=IDA] [GO:0090297
"positive regulation of mitochondrial DNA replication"
evidence=IMP] [GO:0034599 "cellular response to oxidative stress"
evidence=IMP] [GO:0006285 "base-excision repair, AP site formation"
evidence=IDA] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR004036 InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730
PROSITE:PS01155 SMART:SM00478 SGD:S000000013 GO:GO:0005739
GO:GO:0005634 EMBL:L05146 EMBL:BK006935 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0003677 GO:GO:0034599 GO:GO:0004519 eggNOG:COG0177 KO:K10773
GO:GO:0008534 GO:GO:0000703 GO:GO:0006285 GO:GO:0090297 PIR:S36719
RefSeq:NP_009387.1 ProteinModelPortal:P31378 SMR:P31378
DIP:DIP-6614N IntAct:P31378 MINT:MINT-673918 STRING:P31378
PaxDb:P31378 EnsemblFungi:YAL015C GeneID:851218 KEGG:sce:YAL015C
CYGD:YAL015c GeneTree:ENSGT00510000047513 HOGENOM:HOG000252209
OMA:LNIMRYC OrthoDB:EOG432477 NextBio:968109 Genevestigator:P31378
GermOnline:YAL015C Uniprot:P31378
Length = 399
Score = 257 (95.5 bits), Expect = 6.5e-22, P = 6.5e-22
Identities = 48/96 (50%), Positives = 63/96 (65%)
Query: 11 KYDGDIPSSLDELLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNRLGWVSQPGRK 70
++ D+P++++ELL LPG+GPKMA+L + W ++GICVD HV R+ WV
Sbjct: 222 QFSSDVPATINELLGLPGVGPKMAYLTLQKAWGKIEGICVDVHVDRLTKLWKWVDA---- 277
Query: 71 QKTSSPEQTREVLQLWLPKEEWVPINPLLVGFGQTI 106
QK +P+QTR LQ WLPK W IN LLVGFGQ I
Sbjct: 278 QKCKTPDQTRTQLQNWLPKGLWTEINGLLVGFGQII 313
>ASPGD|ASPL0000064583 [details] [associations]
symbol:AN10978 species:162425 "Emericella nidulans"
[GO:0006285 "base-excision repair, AP site formation" evidence=IEA]
[GO:0034599 "cellular response to oxidative stress" evidence=IEA]
[GO:0090297 "positive regulation of mitochondrial DNA replication"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0034043 "5-hydroxymethyluracil
DNA N-glycosylase activity" evidence=IEA] [GO:0034039
"8-oxo-7,8-dihydroguanine DNA N-glycosylase activity" evidence=IEA]
[GO:0034042 "5-formyluracil DNA N-glycosylase activity"
evidence=IEA] [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000445
InterPro:IPR003265 InterPro:IPR004036 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 PROSITE:PS01155 SMART:SM00478
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677 EMBL:BN001304
GO:GO:0004519 HOGENOM:HOG000252209 EnsemblFungi:CADANIAT00000774
OMA:WHEINKL Uniprot:C8VC05
Length = 429
Score = 247 (92.0 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 50/101 (49%), Positives = 64/101 (63%)
Query: 1 MKKIAPICLTKYDGDIPSSLDELLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNR 60
+KK A I +Y+ DIPS+ EL+ LPG+GPKMA+L M+ W +GI VD HVHRI N
Sbjct: 287 IKKAAEIIRDQYNSDIPSTPAELMKLPGVGPKMAYLCMSAAWGKHEGIGVDVHVHRITNL 346
Query: 61 LGWVSQPGRKQKTSSPEQTREVLQLWLPKEEWVPINPLLVG 101
GW KT +PE+TR L+ WLPK++W IN L G
Sbjct: 347 WGW-------HKTKTPEETRMSLESWLPKDKWHEINKLRCG 380
>TIGR_CMR|CHY_1121 [details] [associations]
symbol:CHY_1121 "endonuclease III" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003906
"DNA-(apurinic or apyrimidinic site) lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR000445
InterPro:IPR003265 InterPro:IPR003583 InterPro:IPR003651
InterPro:IPR004036 InterPro:IPR005759 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 PIRSF:PIRSF001435 PROSITE:PS01155
SMART:SM00278 SMART:SM00478 SMART:SM00525 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0051539 GO:GO:0005622 GO:GO:0004519
GO:GO:0003906 eggNOG:COG0177 HOGENOM:HOG000252206 KO:K10773
OMA:NNKSKHL TIGRFAMs:TIGR01083 RefSeq:YP_359967.1
ProteinModelPortal:Q3AD17 STRING:Q3AD17 GeneID:3726382
KEGG:chy:CHY_1121 PATRIC:21275382
BioCyc:CHYD246194:GJCN-1120-MONOMER Uniprot:Q3AD17
Length = 210
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 46/121 (38%), Positives = 63/121 (52%)
Query: 3 KIAPICLTKYDGDIPSSLDELLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNRLG 62
KIA I +Y G +P S ELL LPG+GPK A +++ VG+N VDTHV R+ RLG
Sbjct: 91 KIAEILDREYHGQVPDSFAELLKLPGVGPKTAEVIVGVGFNK-PSFPVDTHVFRVARRLG 149
Query: 63 WVSQPGRKQKTSSPEQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRCGMCSVSEL 122
K +PE L+ P W+ ++ L+ FG+ IC +P C +C E
Sbjct: 150 L-------SKARTPEGVSFDLKKIFPPNSWIDLHHRLIFFGRRICKAQKPSCNICPFPEF 202
Query: 123 C 123
C
Sbjct: 203 C 203
>TIGR_CMR|DET_0935 [details] [associations]
symbol:DET_0935 "endonuclease III" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003906 "DNA-(apurinic or
apyrimidinic site) lyase activity" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004035 InterPro:IPR004036
InterPro:IPR005759 InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730
PIRSF:PIRSF001435 PROSITE:PS00764 PROSITE:PS01155 SMART:SM00478
SMART:SM00525 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677 GO:GO:0051539
GO:GO:0005622 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0004519
GO:GO:0003906 eggNOG:COG0177 KO:K10773 OMA:NNKSKHL
TIGRFAMs:TIGR01083 HOGENOM:HOG000252208 RefSeq:YP_181660.1
ProteinModelPortal:Q3Z7Y9 STRING:Q3Z7Y9 GeneID:3229754
KEGG:det:DET0935 PATRIC:21608917 ProtClustDB:CLSK837188
BioCyc:DETH243164:GJNF-936-MONOMER Uniprot:Q3Z7Y9
Length = 218
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 37/116 (31%), Positives = 69/116 (59%)
Query: 9 LTKYDGDIPSSLDELLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNRLGWVSQPG 68
++++ GD+P ++ ++L LPG+G K A++V++ + V+GI VDTHV R+ RLG +
Sbjct: 101 VSRFGGDVPRNMADMLTLPGVGRKTANVVLHNAFGLVEGIAVDTHVKRLAGRLGLSTN-- 158
Query: 69 RKQKTSSPEQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRCGMCSVSELCP 124
+ P + + L +P+ EW + L+ G+ +C +PRC C ++++CP
Sbjct: 159 -----TDPVKIEQDLMALIPRSEWGNFSYYLIDHGRAVCDAKKPRCPECVLNDICP 209
>UNIPROTKB|Q97QE0 [details] [associations]
symbol:nth "Endonuclease III" species:170187 "Streptococcus
pneumoniae TIGR4" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000445 InterPro:IPR003265 InterPro:IPR003583
InterPro:IPR004036 InterPro:IPR005759 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 PIRSF:PIRSF001435 PROSITE:PS01155
SMART:SM00278 SMART:SM00478 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0003677 GO:GO:0005622 EMBL:AE005672 GenomeReviews:AE005672_GR
GO:GO:0004519 GO:GO:0003906 KO:K10773 OMA:NNKSKHL
TIGRFAMs:TIGR01083 HOGENOM:HOG000252208 HSSP:P20625 PIR:D98016
PIR:F95148 RefSeq:NP_345743.1 ProteinModelPortal:Q97QE0
EnsemblBacteria:EBSTRT00000027009 GeneID:931793 KEGG:spn:SP_1279
PATRIC:19706957 ProtClustDB:CLSK884066 Uniprot:Q97QE0
Length = 209
Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 42/115 (36%), Positives = 66/115 (57%)
Query: 1 MKKIAPICLTKYDGDIPSSLDELLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNR 60
+KK A L +DG +P + +EL L G+G K A++VM+VG+ + VDTHV RIC
Sbjct: 91 LKKCAQQLLDDFDGQVPQTREELESLAGVGRKTANVVMSVGFG-IPAFAVDTHVERICKH 149
Query: 61 LGWVSQPGRKQKTSSP-EQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRC 114
V +K+++P E + V+ + LP E+W+ + ++ FG+ IC P P C
Sbjct: 150 HDIV------KKSATPLEVEKRVMDI-LPPEQWLAAHQAMIYFGRAICHPKNPEC 197
>UNIPROTKB|P0AB83 [details] [associations]
symbol:nth "endonuclease III; specific for apurinic and/or
apyrimidinic sites" species:83333 "Escherichia coli K-12"
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0051539 "4 iron, 4
sulfur cluster binding" evidence=IEA] [GO:0051536 "iron-sulfur
cluster binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0016798 "hydrolase activity, acting on glycosyl bonds"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003906 "DNA-(apurinic or apyrimidinic site) lyase activity"
evidence=IEA] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003583 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR005759 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 Pfam:PF10576 PIRSF:PIRSF001435
PROSITE:PS00764 PROSITE:PS01155 SMART:SM00278 SMART:SM00478
SMART:SM00525 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046872 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 GO:GO:0051539 GO:GO:0005622
GO:GO:0004519 GO:GO:0003906 GO:GO:0016798 eggNOG:COG0177
EMBL:J02857 PIR:A32412 RefSeq:NP_416150.1 RefSeq:YP_489897.1
PDB:2ABK PDBsum:2ABK ProteinModelPortal:P0AB83 SMR:P0AB83
DIP:DIP-48071N IntAct:P0AB83 MINT:MINT-1223379
EnsemblBacteria:EBESCT00000001176 EnsemblBacteria:EBESCT00000001177
EnsemblBacteria:EBESCT00000015357 GeneID:12933192 GeneID:947122
KEGG:ecj:Y75_p1610 KEGG:eco:b1633 PATRIC:32118568 EchoBASE:EB0656
EcoGene:EG10662 HOGENOM:HOG000252206 KO:K10773 OMA:NNKSKHL
ProtClustDB:PRK10702 BioCyc:EcoCyc:EG10662-MONOMER
BioCyc:ECOL316407:JW1625-MONOMER EvolutionaryTrace:P0AB83
Genevestigator:P0AB83 TIGRFAMs:TIGR01083 Uniprot:P0AB83
Length = 211
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 44/123 (35%), Positives = 65/123 (52%)
Query: 3 KIAPICLTKYDGDIPSSLDELLLLPGIGPKMAHLVMNV--GWNNVQGICVDTHVHRICNR 60
K I L +++G++P L LPG+G K A++V+N GW I VDTH+ R+CNR
Sbjct: 91 KTCRILLEQHNGEVPEDRAALEALPGVGRKTANVVLNTAFGWPT---IAVDTHIFRVCNR 147
Query: 61 LGWVSQPGRKQKTSSPEQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRCGMCSVS 120
+ PG+ + EQ E L +P E V + L+ G+ C +PRCG C +
Sbjct: 148 TQFA--PGK-----NVEQVEEKLLKVVPAEFKVDCHHWLILHGRYTCIARKPRCGSCIIE 200
Query: 121 ELC 123
+LC
Sbjct: 201 DLC 203
>TIGR_CMR|BA_1570 [details] [associations]
symbol:BA_1570 "endonuclease III" species:198094 "Bacillus
anthracis str. Ames" [GO:0000703 "oxidized pyrimidine nucleobase
lesion DNA N-glycosylase activity" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003583 InterPro:IPR003651 InterPro:IPR004036
InterPro:IPR005759 InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730
Pfam:PF10576 PIRSF:PIRSF001435 PROSITE:PS01155 SMART:SM00278
SMART:SM00478 SMART:SM00525 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003677
GO:GO:0051539 GO:GO:0005622 GO:GO:0004519 GO:GO:0003906 KO:K10773
OMA:NNKSKHL TIGRFAMs:TIGR01083 HOGENOM:HOG000252208 HSSP:P20625
RefSeq:NP_844020.1 RefSeq:YP_018193.1 RefSeq:YP_027725.1
ProteinModelPortal:Q81SS5 SMR:Q81SS5 DNASU:1083694
EnsemblBacteria:EBBACT00000010838 EnsemblBacteria:EBBACT00000014468
EnsemblBacteria:EBBACT00000019730 GeneID:1083694 GeneID:2815568
GeneID:2851771 KEGG:ban:BA_1570 KEGG:bar:GBAA_1570 KEGG:bat:BAS1456
ProtClustDB:CLSK2521133 BioCyc:BANT260799:GJAJ-1530-MONOMER
BioCyc:BANT261594:GJ7F-1594-MONOMER Uniprot:Q81SS5
Length = 215
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 41/123 (33%), Positives = 66/123 (53%)
Query: 1 MKKIAPICLTKYDGDIPSSLDELLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNR 60
++K+ + L Y+G++P DEL LPG+G K A++V++V + + I VDTHV R+ R
Sbjct: 90 IQKLCRMLLDDYNGEVPKDRDELTKLPGVGRKTANVVVSVAFG-IPAIAVDTHVERVSKR 148
Query: 61 LGWVSQPGRKQKTSSPEQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRCGMCSVS 120
L K E+T L +P +EW + ++ FG+ C RP+C C +
Sbjct: 149 LAICRW---KDSVLEVEKT---LMKKIPMDEWSVTHHRMIFFGRYHCKAQRPQCEECPLL 202
Query: 121 ELC 123
E+C
Sbjct: 203 EVC 205
>UNIPROTKB|P63540 [details] [associations]
symbol:nth "Endonuclease III" species:1773 "Mycobacterium
tuberculosis" [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0005618 "cell wall" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0006281 "DNA repair"
evidence=IDA] [GO:0019104 "DNA N-glycosylase activity"
evidence=IDA] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003583 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR005759 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 Pfam:PF10576 PIRSF:PIRSF001435
PROSITE:PS00764 PROSITE:PS01155 SMART:SM00278 SMART:SM00478
SMART:SM00525 GO:GO:0005886 GO:GO:0005618 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0046872
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 EMBL:BX842583 GO:GO:0006281
GO:GO:0051539 GO:GO:0005622 GO:GO:0003690 GO:GO:0004519
GO:GO:0003906 eggNOG:COG0177 GO:GO:0019104 KO:K10773 OMA:NNKSKHL
TIGRFAMs:TIGR01083 PIR:C70790 RefSeq:NP_218191.2 RefSeq:NP_338328.1
RefSeq:YP_006517162.1 ProteinModelPortal:P63540 SMR:P63540
PRIDE:P63540 EnsemblBacteria:EBMYCT00000000148
EnsemblBacteria:EBMYCT00000071122 GeneID:13317283 GeneID:885058
GeneID:926474 KEGG:mtc:MT3775 KEGG:mtu:Rv3674c KEGG:mtv:RVBD_3674c
PATRIC:18130064 TubercuList:Rv3674c HOGENOM:HOG000252208
ProtClustDB:CLSK799395 Uniprot:P63540
Length = 245
Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 31/114 (27%), Positives = 65/114 (57%)
Query: 11 KYDGDIPSSLDELLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNRLGWVSQPGRK 70
++ G++P+++D+L+ LPG+G K A++++ + + GI VDTH R+ R W +
Sbjct: 110 RFGGEVPATMDKLVTLPGVGRKTANVILGNAFG-IPGITVDTHFGRLVRRWRWTT----- 163
Query: 71 QKTSSPEQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRCGMCSVSELCP 124
P + + + + ++EW ++ ++ G+ +C RP CG+C +++ CP
Sbjct: 164 --AEDPVKVEQAVGELIERKEWTLLSHRVIFHGRRVCHARRPACGVCVLAKDCP 215
>TIGR_CMR|ECH_0857 [details] [associations]
symbol:ECH_0857 "endonuclease III" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0003906 "DNA-(apurinic or
apyrimidinic site) lyase activity" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] InterPro:IPR003265 InterPro:IPR003583
InterPro:IPR003651 InterPro:IPR004035 InterPro:IPR005759
InterPro:IPR011257 Pfam:PF00730 Pfam:PF10576 PIRSF:PIRSF001435
PROSITE:PS00764 SMART:SM00278 SMART:SM00478 SMART:SM00525
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0051539 GO:GO:0005622 GO:GO:0004519
GO:GO:0003906 eggNOG:COG0177 HOGENOM:HOG000252206 KO:K10773
OMA:NNKSKHL TIGRFAMs:TIGR01083 RefSeq:YP_507652.1
ProteinModelPortal:Q2GFY1 SMR:Q2GFY1 STRING:Q2GFY1 GeneID:3928070
KEGG:ech:ECH_0857 PATRIC:20577124 ProtClustDB:CLSK749547
BioCyc:ECHA205920:GJNR-860-MONOMER Uniprot:Q2GFY1
Length = 210
Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 38/120 (31%), Positives = 67/120 (55%)
Query: 4 IAPICLTKYDGDIPSSLDELLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNRLGW 63
++ I + +++ ++P + L+ LPG+G K A++ +N W N+ + VDTHV R+ NR+G
Sbjct: 92 LSGIIINQHNSNVPLDFNTLVALPGVGRKSANVFLNT-WLNLPTVAVDTHVFRVSNRIGL 150
Query: 64 VSQPGRKQKTSSPEQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRCGMCSVSELC 123
V K S+ +T + L +PK+ + + LV G+ +C +P C C V +LC
Sbjct: 151 V-------KESNVLKTEDALLNVIPKKWLLYAHHWLVLHGRYVCKSRKPLCSQCVVQDLC 203
>TIGR_CMR|SO_2514 [details] [associations]
symbol:SO_2514 "endonuclease III" species:211586
"Shewanella oneidensis MR-1" [GO:0003906 "DNA-(apurinic or
apyrimidinic site) lyase activity" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003583 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR005759 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 Pfam:PF10576 PIRSF:PIRSF001435
PROSITE:PS00764 PROSITE:PS01155 SMART:SM00278 SMART:SM00478
SMART:SM00525 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677 GO:GO:0051539
GO:GO:0005622 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0004519
GO:GO:0003906 HOGENOM:HOG000252206 KO:K10773 OMA:NNKSKHL
TIGRFAMs:TIGR01083 HSSP:P20625 RefSeq:NP_718101.1
ProteinModelPortal:Q8EE75 SMR:Q8EE75 GeneID:1170225
KEGG:son:SO_2514 PATRIC:23524657 Uniprot:Q8EE75
Length = 231
Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 41/123 (33%), Positives = 66/123 (53%)
Query: 3 KIAPICLTKYDGDIPSSLDELLLLPGIGPKMAHLVMNV--GWNNVQGICVDTHVHRICNR 60
K I + KY+G++P + L LPG+G K A++V+N GW I VDTH+ R+ NR
Sbjct: 91 KACEILIEKYNGEVPEDREALESLPGVGRKTANVVLNTAFGWPT---IAVDTHIFRLANR 147
Query: 61 LGWVSQPGRKQKTSSPEQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRCGMCSVS 120
+ PG+ + E +L++ +P E V ++ + G+ C +PRCG C +
Sbjct: 148 TKFA--PGK----NVVEVEERMLKV-VPAEFKVDVHHWFILHGRYTCLARKPRCGSCIIE 200
Query: 121 ELC 123
+LC
Sbjct: 201 DLC 203
>UNIPROTKB|Q9KT92 [details] [associations]
symbol:VC_1011 "Endonuclease III" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0003906 "DNA-(apurinic
or apyrimidinic site) lyase activity" evidence=ISS] [GO:0006281
"DNA repair" evidence=ISS] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003583 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR005759 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 Pfam:PF10576 PIRSF:PIRSF001435
PROSITE:PS00764 PROSITE:PS01155 SMART:SM00278 SMART:SM00478
SMART:SM00525 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006281 GO:GO:0051539 GO:GO:0005622
GO:GO:0004519 GO:GO:0003906 KO:K10773 OMA:NNKSKHL
TIGRFAMs:TIGR01083 HSSP:P20625 PIR:A82252 RefSeq:NP_230657.1
ProteinModelPortal:Q9KT92 SMR:Q9KT92 DNASU:2614264 GeneID:2614264
KEGG:vch:VC1011 PATRIC:20081122 ProtClustDB:CLSK874181
Uniprot:Q9KT92
Length = 213
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 40/123 (32%), Positives = 66/123 (53%)
Query: 3 KIAPICLTKYDGDIPSSLDELLLLPGIGPKMAHLVMNV--GWNNVQGICVDTHVHRICNR 60
K I L K+ G++P + L LPG+G K A++V+N GW I VDTH+ R+ NR
Sbjct: 91 KTCRILLEKHQGEVPEDREALEALPGVGRKTANVVLNTAFGWPT---IAVDTHIFRVSNR 147
Query: 61 LGWVSQPGRKQKTSSPEQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRCGMCSVS 120
+ G+ + E ++L++ +P E + ++ L+ G+ C +PRCG C +
Sbjct: 148 TKFAV--GK----NVDEVEHKLLKV-VPNEFKLDVHHWLILHGRYTCVARKPRCGSCIIE 200
Query: 121 ELC 123
+LC
Sbjct: 201 DLC 203
>TIGR_CMR|CBU_1697 [details] [associations]
symbol:CBU_1697 "endonuclease III" species:227377
"Coxiella burnetii RSA 493" [GO:0003906 "DNA-(apurinic or
apyrimidinic site) lyase activity" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003583 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR005759 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 Pfam:PF10576 PIRSF:PIRSF001435
PROSITE:PS00764 PROSITE:PS01155 SMART:SM00278 SMART:SM00478
SMART:SM00525 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677 GO:GO:0051539
GO:GO:0005622 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0004519
GO:GO:0003906 HOGENOM:HOG000252206 KO:K10773 OMA:NNKSKHL
TIGRFAMs:TIGR01083 HSSP:P20625 RefSeq:NP_820678.1
ProteinModelPortal:Q83B22 SMR:Q83B22 PRIDE:Q83B22 GeneID:1209608
KEGG:cbu:CBU_1697 PATRIC:17932131 ProtClustDB:CLSK914967
BioCyc:CBUR227377:GJ7S-1668-MONOMER Uniprot:Q83B22
Length = 218
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 39/121 (32%), Positives = 61/121 (50%)
Query: 3 KIAPICLTKYDGDIPSSLDELLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNRLG 62
K I + Y +P + +EL LPG+G K A++++N + I VDTH+ R+ NR G
Sbjct: 91 KTCKILVENYHSKVPRTREELEALPGVGRKTANVILNTAFGE-HAIAVDTHIFRVANRTG 149
Query: 63 WVSQPGRKQKTSSPEQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRCGMCSVSEL 122
+ KT P + L +PK+ + LV G+ IC RP+C C +++L
Sbjct: 150 LA-----RGKT--PLAVEKKLMEVVPKKYLADAHHWLVLHGRYICIARRPKCSECLINDL 202
Query: 123 C 123
C
Sbjct: 203 C 203
>TIGR_CMR|VC_1011 [details] [associations]
symbol:VC_1011 "endonuclease III" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003906 "DNA-(apurinic or
apyrimidinic site) lyase activity" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003583 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR005759 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 Pfam:PF10576 PIRSF:PIRSF001435
PROSITE:PS00764 PROSITE:PS01155 SMART:SM00278 SMART:SM00478
SMART:SM00525 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006281 GO:GO:0051539 GO:GO:0005622
GO:GO:0004519 GO:GO:0003906 KO:K10773 OMA:NNKSKHL
TIGRFAMs:TIGR01083 HSSP:P20625 PIR:A82252 RefSeq:NP_230657.1
ProteinModelPortal:Q9KT92 SMR:Q9KT92 DNASU:2614264 GeneID:2614264
KEGG:vch:VC1011 PATRIC:20081122 ProtClustDB:CLSK874181
Uniprot:Q9KT92
Length = 213
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 40/123 (32%), Positives = 66/123 (53%)
Query: 3 KIAPICLTKYDGDIPSSLDELLLLPGIGPKMAHLVMNV--GWNNVQGICVDTHVHRICNR 60
K I L K+ G++P + L LPG+G K A++V+N GW I VDTH+ R+ NR
Sbjct: 91 KTCRILLEKHQGEVPEDREALEALPGVGRKTANVVLNTAFGWPT---IAVDTHIFRVSNR 147
Query: 61 LGWVSQPGRKQKTSSPEQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRCGMCSVS 120
+ G+ + E ++L++ +P E + ++ L+ G+ C +PRCG C +
Sbjct: 148 TKFAV--GK----NVDEVEHKLLKV-VPNEFKLDVHHWLILHGRYTCVARKPRCGSCIIE 200
Query: 121 ELC 123
+LC
Sbjct: 201 DLC 203
>TIGR_CMR|APH_0897 [details] [associations]
symbol:APH_0897 "endonuclease III" species:212042
"Anaplasma phagocytophilum HZ" [GO:0003906 "DNA-(apurinic or
apyrimidinic site) lyase activity" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003583 InterPro:IPR003651 InterPro:IPR005759
InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730 PIRSF:PIRSF001435
SMART:SM00278 SMART:SM00478 SMART:SM00525 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 GO:GO:0051539 GO:GO:0005622
EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0004519 GO:GO:0003906
eggNOG:COG0177 HOGENOM:HOG000252206 KO:K10773 OMA:NNKSKHL
TIGRFAMs:TIGR01083 ProtClustDB:CLSK749547 RefSeq:YP_505472.1
ProteinModelPortal:Q2GJH9 SMR:Q2GJH9 STRING:Q2GJH9 GeneID:3930592
KEGG:aph:APH_0897 PATRIC:20950500
BioCyc:APHA212042:GHPM-910-MONOMER Uniprot:Q2GJH9
Length = 209
Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 44/122 (36%), Positives = 63/122 (51%)
Query: 3 KIAPICLTKYDGDIPSSLDELLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNRLG 62
+++ I Y G IP D L LPG+G K A++ +N V I VDTHV R+ NR+G
Sbjct: 89 QLSEIIENTYGGTIPRDFDALTALPGVGRKSANVFLN-SCLGVPTIAVDTHVFRVSNRIG 147
Query: 63 WVSQPGRKQKTSSPEQTREVLQLWLPKEEW-VPINPLLVGFGQTICTPIRPRCGMCSVSE 121
V + SS + L+ +P E+W + + LV G+ +C P CG C VS+
Sbjct: 148 LVQE-------SSVLGVEKSLEKVVP-EKWKLYAHHWLVLHGRYVCKARTPLCGKCIVSD 199
Query: 122 LC 123
LC
Sbjct: 200 LC 201
>TIGR_CMR|CJE_0698 [details] [associations]
symbol:CJE_0698 "endonuclease III" species:195099
"Campylobacter jejuni RM1221" [GO:0003906 "DNA-(apurinic or
apyrimidinic site) lyase activity" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] InterPro:IPR003265 InterPro:IPR003651
InterPro:IPR004035 InterPro:IPR005759 InterPro:IPR011257
Pfam:PF00730 PIRSF:PIRSF001435 PROSITE:PS00764 SMART:SM00478
SMART:SM00525 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0051539 GO:GO:0005622
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0004519 GO:GO:0003906
eggNOG:COG0177 HOGENOM:HOG000252206 KO:K10773 OMA:NNKSKHL
TIGRFAMs:TIGR01083 PIR:B81407 RefSeq:YP_178710.1
ProteinModelPortal:Q5HVH5 STRING:Q5HVH5 GeneID:3231980
KEGG:cjr:CJE0698 PATRIC:20043124 ProtClustDB:CLSK872385
BioCyc:CJEJ195099:GJC0-715-MONOMER Uniprot:Q5HVH5
Length = 208
Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 43/121 (35%), Positives = 62/121 (51%)
Query: 3 KIAPICLTKYDGDIPSSLDELLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNRLG 62
K+A +DG+IP L L G+G K AH+V+ + W + VDTHV R+ +RLG
Sbjct: 89 KMAKAVCENFDGEIPLDEQNLKSLAGVGQKTAHVVL-IEWCGANFMAVDTHVFRVSHRLG 147
Query: 63 WVSQPGRKQKTSSPEQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRCGMCSVSEL 122
+S K KT PE T E L K+ ++ +V FG+ C +P C C ++ L
Sbjct: 148 -LS----KAKT--PEATEEDLTRTF-KDNLNYLHQAMVLFGRYTCKAKKPLCKECFLNHL 199
Query: 123 C 123
C
Sbjct: 200 C 200
>TIGR_CMR|SPO_3581 [details] [associations]
symbol:SPO_3581 "endonuclease III" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003906 "DNA-(apurinic or
apyrimidinic site) lyase activity" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003583 InterPro:IPR003651 InterPro:IPR005759
InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730 Pfam:PF10576
PIRSF:PIRSF001435 SMART:SM00278 SMART:SM00478 SMART:SM00525
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 GO:GO:0051539 GO:GO:0005622
GO:GO:0004519 GO:GO:0003906 HOGENOM:HOG000252206 KO:K10773
OMA:NNKSKHL TIGRFAMs:TIGR01083 RefSeq:YP_168776.1
ProteinModelPortal:Q5LMI2 SMR:Q5LMI2 GeneID:3196325
KEGG:sil:SPO3581 PATRIC:23380639 ProtClustDB:CLSK934216
Uniprot:Q5LMI2
Length = 214
Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 37/121 (30%), Positives = 63/121 (52%)
Query: 3 KIAPICLTKYDGDIPSSLDELLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNRLG 62
K++ I + +Y G++P+S L LPG+G K A++V+N+ W + VDTH+ R+ NR G
Sbjct: 95 KLSRILVEQYGGEVPNSRAALQSLPGVGRKTANVVLNMWWR-IPAQAVDTHIFRVGNRTG 153
Query: 63 WVSQPGRKQKTSSPEQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRCGMCSVSEL 122
PG+ T ++ +P + + L+ G+ C +P CG C + +L
Sbjct: 154 IC--PGKDVDT-----VERAIEDNIPADFQQHAHHWLILHGRYHCKARKPMCGTCLIRDL 206
Query: 123 C 123
C
Sbjct: 207 C 207
>UNIPROTKB|H3BRL9 [details] [associations]
symbol:NTHL1 "Endonuclease III-like protein 1" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004519
"endonuclease activity" evidence=IEA] [GO:0006284 "base-excision
repair" evidence=IEA] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR004036 InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730
PROSITE:PS01155 SMART:SM00478 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 GO:GO:0003677 GO:GO:0004519 HGNC:HGNC:8028
EMBL:AC093513 Ensembl:ENST00000561841 Uniprot:H3BRL9
Length = 218
Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 28/56 (50%), Positives = 36/56 (64%)
Query: 1 MKKIAPICLTKYDGDIPSSLDELLLLPGIGPKMAHLVMNVGWNNVQGI--CVDTHV 54
+K+ + I Y GDIP+S+ EL+ LPG+GPKMAHL M V W V GI C H+
Sbjct: 155 IKQTSAILQQHYGGDIPASVAELVALPGVGPKMAHLAMAVAWGTVSGIGVCGPDHL 210
>UNIPROTKB|Q9KUR3 [details] [associations]
symbol:VC_0452 "A/G-specific adenine glycosylase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0006281 "DNA repair" evidence=ISS] [GO:0019104 "DNA
N-glycosylase activity" evidence=ISS] InterPro:IPR000445
InterPro:IPR003265 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR005760 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00633 Pfam:PF00730 Pfam:PF10576
PROSITE:PS00764 PROSITE:PS01155 SMART:SM00478 SMART:SM00525
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006281 Gene3D:3.90.79.10
SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0005622 GO:GO:0004519
GO:GO:0019104 KO:K03575 TIGRFAMs:TIGR01084 OMA:FHLDIQP HSSP:P17802
PIR:D82320 RefSeq:NP_230106.1 ProteinModelPortal:Q9KUR3 SMR:Q9KUR3
DNASU:2615114 GeneID:2615114 KEGG:vch:VC0452 PATRIC:20079999
ProtClustDB:CLSK2391029 Uniprot:Q9KUR3
Length = 353
Score = 141 (54.7 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 36/127 (28%), Positives = 61/127 (48%)
Query: 1 MKKIAPICLTKYDGDIPSSLDELLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNR 60
+ K A + +++Y G+ P+ L+++ LPG+G A V++ + I +D +V R R
Sbjct: 87 LHKAAQMVVSEYGGEFPTDLEQMNALPGVGRSTAAAVLSSVYKKPHAI-LDGNVKRTLAR 145
Query: 61 L----GWVSQPGRKQKTSSPEQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRCGM 116
GW PG+K S Q ++ PK + N ++ G ICT +P+C +
Sbjct: 146 CFAVEGW---PGQK---SVENQLWHYAEMHTPKVDVDKYNQAMMDMGAMICTRSKPKCSL 199
Query: 117 CSVSELC 123
C V C
Sbjct: 200 CPVESFC 206
>TIGR_CMR|VC_0452 [details] [associations]
symbol:VC_0452 "A/G-specific adenine glycosylase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006281 "DNA
repair" evidence=ISS] [GO:0019104 "DNA N-glycosylase activity"
evidence=ISS] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004035 InterPro:IPR004036
InterPro:IPR005760 InterPro:IPR011257 InterPro:IPR015797
Pfam:PF00633 Pfam:PF00730 Pfam:PF10576 PROSITE:PS00764
PROSITE:PS01155 SMART:SM00478 SMART:SM00525 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006281 Gene3D:3.90.79.10
SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0005622 GO:GO:0004519
GO:GO:0019104 KO:K03575 TIGRFAMs:TIGR01084 OMA:FHLDIQP HSSP:P17802
PIR:D82320 RefSeq:NP_230106.1 ProteinModelPortal:Q9KUR3 SMR:Q9KUR3
DNASU:2615114 GeneID:2615114 KEGG:vch:VC0452 PATRIC:20079999
ProtClustDB:CLSK2391029 Uniprot:Q9KUR3
Length = 353
Score = 141 (54.7 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 36/127 (28%), Positives = 61/127 (48%)
Query: 1 MKKIAPICLTKYDGDIPSSLDELLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNR 60
+ K A + +++Y G+ P+ L+++ LPG+G A V++ + I +D +V R R
Sbjct: 87 LHKAAQMVVSEYGGEFPTDLEQMNALPGVGRSTAAAVLSSVYKKPHAI-LDGNVKRTLAR 145
Query: 61 L----GWVSQPGRKQKTSSPEQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRCGM 116
GW PG+K S Q ++ PK + N ++ G ICT +P+C +
Sbjct: 146 CFAVEGW---PGQK---SVENQLWHYAEMHTPKVDVDKYNQAMMDMGAMICTRSKPKCSL 199
Query: 117 CSVSELC 123
C V C
Sbjct: 200 CPVESFC 206
>TIGR_CMR|NSE_0246 [details] [associations]
symbol:NSE_0246 "endonuclease III" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003906 "DNA-(apurinic
or apyrimidinic site) lyase activity" evidence=ISS] [GO:0006281
"DNA repair" evidence=ISS] InterPro:IPR003265 InterPro:IPR003583
InterPro:IPR003651 InterPro:IPR004036 InterPro:IPR005759
InterPro:IPR011257 Pfam:PF00730 PIRSF:PIRSF001435 PROSITE:PS01155
SMART:SM00278 SMART:SM00478 SMART:SM00525 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 GO:GO:0051539 GO:GO:0005622
GO:GO:0004519 GO:GO:0003906 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0177 HOGENOM:HOG000252206 KO:K10773 OMA:NNKSKHL
TIGRFAMs:TIGR01083 RefSeq:YP_506140.1 ProteinModelPortal:Q2GEF6
STRING:Q2GEF6 GeneID:3931594 KEGG:nse:NSE_0246 PATRIC:22680583
ProtClustDB:CLSK2528191 BioCyc:NSEN222891:GHFU-276-MONOMER
Uniprot:Q2GEF6
Length = 216
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 36/110 (32%), Positives = 56/110 (50%)
Query: 15 DIPSSLDELLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNRLGWVSQPGRKQKTS 74
DIP++ L LPGIG K A++++ + + I VDTHV R+ NR+G V R
Sbjct: 109 DIPNNFQYLQSLPGIGRKSANVILCTLFGEKR-IAVDTHVFRVSNRIGLVH--ARNVLEV 165
Query: 75 SPEQTREVLQLWLPKEE-WVPINPLLVGFGQTICTPIRPRCGMCSVSELC 123
+ + + +LP+ W LV G+ IC +P C C +++LC
Sbjct: 166 EKQLLENIPKTFLPQAHLW------LVLHGRYICKARKPECKNCIINDLC 209
>TIGR_CMR|SO_3368 [details] [associations]
symbol:SO_3368 "A/G-specific adenine glycosylase"
species:211586 "Shewanella oneidensis MR-1" [GO:0006281 "DNA
repair" evidence=ISS] [GO:0019104 "DNA N-glycosylase activity"
evidence=ISS] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003583 InterPro:IPR003651 InterPro:IPR004036
InterPro:IPR005760 InterPro:IPR011257 InterPro:IPR015797
Pfam:PF00633 Pfam:PF00730 PROSITE:PS01155 SMART:SM00278
SMART:SM00478 SMART:SM00525 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0003677 Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0051539
GO:GO:0005622 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0004519
GO:GO:0019104 KO:K03575 TIGRFAMs:TIGR01084 HOGENOM:HOG000028744
OMA:FHLDIQP HSSP:P17802 RefSeq:NP_718922.1
ProteinModelPortal:Q8EBX7 SMR:Q8EBX7 GeneID:1171048
KEGG:son:SO_3368 PATRIC:23526410 ProtClustDB:CLSK907131
Uniprot:Q8EBX7
Length = 365
Score = 135 (52.6 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 36/124 (29%), Positives = 59/124 (47%)
Query: 1 MKKIAPICLTKYDGDIPSSLDELLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNR 60
+ K A + +Y G P+ +++L LPGIG A V+++ I +D +V R+ R
Sbjct: 90 LHKAAKMIRDEYQGQFPTDFEQVLALPGIGRSTAGAVLSLSLGQHHPI-LDGNVKRVLAR 148
Query: 61 LGWVSQ-PGRKQKTSSPEQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRCGMCSV 119
G + PG+K Q E L P+++ N ++ G +ICT +P C C V
Sbjct: 149 HGAIEGWPGQKPVEERLWQLTEQLT---PQQDIQKYNQAMMDIGASICTRSKPNCAACPV 205
Query: 120 SELC 123
+ C
Sbjct: 206 AVDC 209
>POMBASE|SPAC26A3.02 [details] [associations]
symbol:myh1 "adenine DNA glycosylase Myh1" species:4896
"Schizosaccharomyces pombe" [GO:0000077 "DNA damage checkpoint"
evidence=IGI] [GO:0000701 "purine-specific mismatch base pair DNA
N-glycosylase activity" evidence=IMP] [GO:0000702 "oxidized base
lesion DNA N-glycosylase activity" evidence=TAS] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IC;IDA] [GO:0006281 "DNA repair"
evidence=IC] [GO:0006284 "base-excision repair" evidence=IC]
[GO:0019104 "DNA N-glycosylase activity" evidence=IDA] [GO:0034644
"cellular response to UV" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=ISM] InterPro:IPR003265 InterPro:IPR003651
InterPro:IPR004035 InterPro:IPR004036 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00730 Pfam:PF10576 PROSITE:PS00764
PROSITE:PS00893 PROSITE:PS01155 PROSITE:PS51462 SMART:SM00478
SMART:SM00525 PomBase:SPAC26A3.02 GO:GO:0005634 GO:GO:0000077
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0046872 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 Gene3D:3.90.79.10 SUPFAM:SSF55811
GO:GO:0051539 GO:GO:0034644 GO:GO:0004519 KO:K03575 eggNOG:COG1194
EMBL:AF053340 PIR:T38390 PIR:T43679 RefSeq:NP_594145.1
ProteinModelPortal:Q10159 IntAct:Q10159 MINT:MINT-1209697
STRING:Q10159 EnsemblFungi:SPAC26A3.02.1 GeneID:2542727
KEGG:spo:SPAC26A3.02 OMA:MVRAFKE OrthoDB:EOG4HDX3M NextBio:20803772
GO:GO:0000702 GO:GO:0000701 Uniprot:Q10159
Length = 461
Score = 136 (52.9 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 39/128 (30%), Positives = 63/128 (49%)
Query: 2 KKIAPIC--LTK-YDGDIPSSLDELLL-LPGIGPKMAHLVMNVGWNNVQGICVDTHVHRI 57
K++ C L K + +IP + DE +PG+GP A V+++ W GI VD +V R+
Sbjct: 120 KRLHQACQHLAKLHPSEIPRTGDEWAKGIPGVGPYTAGAVLSIAWKQPTGI-VDGNVIRV 178
Query: 58 CNRLGWVSQPGRKQKTSSP--EQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRCG 115
+R + K K ++ + E++ P + N L+ G CTP PRC
Sbjct: 179 LSRALAIHSDCSKGKANALIWKLANELVDPVRPGD----FNQALMELGAITCTPQSPRCS 234
Query: 116 MCSVSELC 123
+C +SE+C
Sbjct: 235 VCPISEIC 242
>TIGR_CMR|CPS_4148 [details] [associations]
symbol:CPS_4148 "A/G-specific adenine glycosylase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004844 "uracil
DNA N-glycosylase activity" evidence=ISS] [GO:0006260 "DNA
replication" evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
[GO:0006310 "DNA recombination" evidence=ISS] InterPro:IPR000445
InterPro:IPR003265 InterPro:IPR003583 InterPro:IPR003651
InterPro:IPR004036 InterPro:IPR005760 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00633 Pfam:PF00730 PROSITE:PS01155
SMART:SM00278 SMART:SM00478 SMART:SM00525 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 Gene3D:3.90.79.10 SUPFAM:SSF55811
GO:GO:0051539 GO:GO:0005622 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0004519 GO:GO:0019104 KO:K03575 eggNOG:COG1194
TIGRFAMs:TIGR01084 HOGENOM:HOG000028744 RefSeq:YP_270802.1
ProteinModelPortal:Q47WM0 SMR:Q47WM0 STRING:Q47WM0 GeneID:3522464
KEGG:cps:CPS_4148 PATRIC:21471157 OMA:LPWRETY
BioCyc:CPSY167879:GI48-4160-MONOMER Uniprot:Q47WM0
Length = 362
Score = 132 (51.5 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 33/123 (26%), Positives = 57/123 (46%)
Query: 1 MKKIAPICLTKYDGDIPSSLDELLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNR 60
+ K A I L YDG P +++++ LPGIG A ++++ I +D +V R+ R
Sbjct: 98 LHKSAKIMLNDYDGHFPIEIEQVIALPGIGRSTAGAILSLSLKQYHPI-LDGNVKRVLAR 156
Query: 61 LGWVSQPGRKQKTSSPEQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRCGMCSVS 120
V G + + ++ + P E N ++ G T+CT +P C +C V
Sbjct: 157 SYLVE--GYNGLSKFDKALWQLSEKLTPAIETDSFNQAMMDLGATVCTRSKPSCDICPVE 214
Query: 121 ELC 123
+ C
Sbjct: 215 QSC 217
>TIGR_CMR|CBU_0940 [details] [associations]
symbol:CBU_0940 "A/G-specific adenine glycosylase"
species:227377 "Coxiella burnetii RSA 493" [GO:0006281 "DNA repair"
evidence=ISS] [GO:0019104 "DNA N-glycosylase activity"
evidence=ISS] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003583 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR005760 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00633 Pfam:PF00730 PROSITE:PS00764
PROSITE:PS01155 SMART:SM00278 SMART:SM00478 SMART:SM00525
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677
Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0005622
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0004519 GO:GO:0019104
KO:K03575 TIGRFAMs:TIGR01084 HOGENOM:HOG000028744 OMA:FHLDIQP
HSSP:P17802 RefSeq:NP_819952.1 ProteinModelPortal:Q83D07 SMR:Q83D07
GeneID:1208834 KEGG:cbu:CBU_0940 PATRIC:17930589
ProtClustDB:CLSK914429 BioCyc:CBUR227377:GJ7S-932-MONOMER
Uniprot:Q83D07
Length = 354
Score = 128 (50.1 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 32/123 (26%), Positives = 58/123 (47%)
Query: 1 MKKIAPICLTKYDGDIPSSLDELLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNR 60
+ + A I Y G PS+++ L LPGIG A V+++G + + +D +V R+ R
Sbjct: 89 LHRAAQIIHVTYHGRFPSTVETLSSLPGIGRSTAGAVLSLGMHQY-AVILDGNVKRVLAR 147
Query: 61 LGWVSQPGRKQKTSSPEQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRCGMCSVS 120
+ P +Q + + + + + PK N ++ G ICT +P+C +C +
Sbjct: 148 YNALDVPINQQVGINILWS--LAEKYTPKNRCWDYNQAMMDIGAMICTRTKPKCSLCPLK 205
Query: 121 ELC 123
C
Sbjct: 206 SSC 208
>TIGR_CMR|SPO_3448 [details] [associations]
symbol:SPO_3448 "A/G-specific adenine glycosylase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004844 "uracil DNA
N-glycosylase activity" evidence=ISS] [GO:0006260 "DNA replication"
evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS] [GO:0006310
"DNA recombination" evidence=ISS] InterPro:IPR000445
InterPro:IPR003265 InterPro:IPR003583 InterPro:IPR003651
InterPro:IPR004036 InterPro:IPR005760 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00633 Pfam:PF00730 PROSITE:PS01155
SMART:SM00278 SMART:SM00478 SMART:SM00525 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0003677 Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0051539
GO:GO:0005622 GO:GO:0004519 GO:GO:0019104 KO:K03575
HOGENOM:HOG000028743 TIGRFAMs:TIGR01084 RefSeq:YP_168644.1
ProteinModelPortal:Q5LMW4 GeneID:3195498 KEGG:sil:SPO3448
PATRIC:23380357 OMA:QAVKPYF ProtClustDB:CLSK934171 Uniprot:Q5LMW4
Length = 351
Score = 126 (49.4 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 35/121 (28%), Positives = 54/121 (44%)
Query: 3 KIAPICLTKYDGDIPSSLDELLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNRLG 62
K A ++ G P S + L+ LPGIGP A + + ++ + + +D +V R+ RL
Sbjct: 102 KCARAVSEEHGGQFPDSYEGLIALPGIGPYTAAAIAAIAFDRAETV-LDGNVERVMARLY 160
Query: 63 WVSQPGRKQKTSSPEQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRCGMCSVSEL 122
V +P K E + P + + L G TICTP P CG+C +
Sbjct: 161 DVQEPLPGVKPVLKEHAAALTPTARPGDHAQAVMDL----GATICTPRAPACGICPLRAP 216
Query: 123 C 123
C
Sbjct: 217 C 217
>UNIPROTKB|O53574 [details] [associations]
symbol:mutY "PROBABLE ADENINE GLYCOSYLASE MUTY"
species:1773 "Mycobacterium tuberculosis" [GO:0005886 "plasma
membrane" evidence=IDA] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730
SMART:SM00478 SMART:SM00525 GO:GO:0005886 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 EMBL:BX842583 GO:GO:0051539
GO:GO:0004519 GO:GO:0016798 KO:K03575 EMBL:AL123456 PIR:F70804
RefSeq:NP_218106.1 RefSeq:NP_338239.1 RefSeq:YP_006517079.1
HSSP:P17802 SMR:O53574 EnsemblBacteria:EBMYCT00000003804
EnsemblBacteria:EBMYCT00000070555 GeneID:13317198 GeneID:886639
GeneID:926528 KEGG:mtc:MT3695 KEGG:mtu:Rv3589 KEGG:mtv:RVBD_3589
PATRIC:18129879 TubercuList:Rv3589 HOGENOM:HOG000028742 OMA:IMLQQTP
ProtClustDB:CLSK792583 Uniprot:O53574
Length = 304
Score = 122 (48.0 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 35/118 (29%), Positives = 54/118 (45%)
Query: 1 MKKIAPICLTKYDGDIPSSLDELLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNR 60
+ + A + ++ +P ++ L+ LPG+G A V + + VDT+V R+ R
Sbjct: 100 LHECATVIARDHNDVVPDDIEILVTLPGVGSYTARAVACFAYRQRVPV-VDTNVRRVVAR 158
Query: 61 LGWVSQPGRKQKTSSPEQTREVLQLWLPKEEWVP-INPLLVGFGQTICTPIRPRCGMC 117
V S P +VL L LP E P + L+ G T+CT PRCG+C
Sbjct: 159 A--VHGRADAGAPSVPRDHADVLAL-LPHRETAPEFSVALMELGATVCTARTPRCGLC 213
>TIGR_CMR|CJE_1792 [details] [associations]
symbol:CJE_1792 "A/G-specific adenine glycosylase"
species:195099 "Campylobacter jejuni RM1221" [GO:0004844 "uracil
DNA N-glycosylase activity" evidence=ISS] [GO:0006260 "DNA
replication" evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
[GO:0006310 "DNA recombination" evidence=ISS] InterPro:IPR000445
InterPro:IPR003265 InterPro:IPR003583 InterPro:IPR003651
InterPro:IPR004036 InterPro:IPR005760 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 PROSITE:PS01155 SMART:SM00278
SMART:SM00478 SMART:SM00525 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0003677 GO:GO:0051539 GO:GO:0005622 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0004519 GO:GO:0019104 KO:K03575
eggNOG:COG1194 HOGENOM:HOG000028743 TIGRFAMs:TIGR01084
RefSeq:YP_179763.1 ProteinModelPortal:Q5HSH2 STRING:Q5HSH2
GeneID:3232419 KEGG:cjr:CJE1792 PATRIC:20045396 OMA:WQGAGYY
ProtClustDB:CLSK879335 BioCyc:CJEJ195099:GJC0-1822-MONOMER
Uniprot:Q5HSH2
Length = 339
Score = 122 (48.0 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 31/123 (25%), Positives = 58/123 (47%)
Query: 1 MKKIAPICLTKYDGDIPSSLDELLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNR 60
+KK A C+ K++ +P +++L L GIG A + G++ VD ++ R+ +R
Sbjct: 105 LKKAALECVDKFEAKLPKEVEDLKKLSGIGAYTAGAIACFGYDQKVSF-VDGNIRRVLSR 163
Query: 61 LGWVSQPGRKQKTSSPEQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRCGMCSVS 120
L + P K+ ++ +E+L L N L+ G +C +CG+C +
Sbjct: 164 LFALENPSMKELE---KRAKELLNL----NHAFDHNQALLDIGALVCVSKNAKCGICPLY 216
Query: 121 ELC 123
+ C
Sbjct: 217 DFC 219
>UNIPROTKB|Q5T418 [details] [associations]
symbol:MUTYH "A/G-specific adenine DNA glycosylase"
species:9606 "Homo sapiens" [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
InterPro:IPR003265 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR011257 Pfam:PF00730 Pfam:PF10576
PROSITE:PS00764 PROSITE:PS01155 SMART:SM00478 SMART:SM00525
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0051539 GO:GO:0004519
EMBL:AL359540 UniGene:Hs.271353 HGNC:HGNC:7527 HOGENOM:HOG000028743
IPI:IPI00647822 SMR:Q5T418 MINT:MINT-1380954 STRING:Q5T418
Ensembl:ENST00000412971 Uniprot:Q5T418
Length = 215
Score = 116 (45.9 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 35/117 (29%), Positives = 53/117 (45%)
Query: 14 GDIPSSLDELL-LLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNRLGWVSQPGRKQK 72
G +P + + L LLPG+G A + ++ + G+ VD +V R+ R+ +
Sbjct: 43 GHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATGV-VDGNVARVLCRVRAIG------- 94
Query: 73 TSSPEQTREVLQLWLPKEEWV-PINP-----LLVGFGQTICTPIRPRCGMCSVSELC 123
+ P T QLW ++ V P P + G T+CTP RP C C V LC
Sbjct: 95 -ADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVESLC 150
>ASPGD|ASPL0000003678 [details] [associations]
symbol:AN10840 species:162425 "Emericella nidulans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003265 InterPro:IPR003583 InterPro:IPR011257
Pfam:PF00730 SMART:SM00278 SMART:SM00478 GO:GO:0003824
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677 EMBL:BN001301
EnsemblFungi:CADANIAT00007418 HOGENOM:HOG000201727 OMA:CGEVPSV
Uniprot:C8V1C2
Length = 502
Score = 106 (42.4 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 34/97 (35%), Positives = 50/97 (51%)
Query: 20 LDELLLLPGIGPKMAHLVMNVGWNNVQGIC--VDTHVHRICNRLGWVSQPGRKQKTSSPE 77
+ EL+ PGIGPK A V+ +Q C VDTH+ RIC L WV P R + ++
Sbjct: 376 MTELMKYPGIGPKTAACVLLFC---LQRPCFAVDTHIFRICKWLNWVP-PDRATEITAFS 431
Query: 78 QTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRC 114
L++ +P P++ LL+ G++ C PRC
Sbjct: 432 H----LEVRIPDHLKYPLHQLLIRHGKS-C----PRC 459
Score = 37 (18.1 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 14 GDIPSSLDELL--LLPG 28
G++PS LD L+ LL G
Sbjct: 231 GEVPSVLDALIRTLLSG 247
>UNIPROTKB|Q5T413 [details] [associations]
symbol:MUTYH "A/G-specific adenine DNA glycosylase"
species:9606 "Homo sapiens" [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004035 InterPro:IPR004036
InterPro:IPR011257 Pfam:PF00730 PROSITE:PS00764 PROSITE:PS01155
SMART:SM00478 SMART:SM00525 GO:GO:0005739 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0051539 GO:GO:0004519 EMBL:AL359540
UniGene:Hs.271353 HGNC:HGNC:7527 HOVERGEN:HBG052540
HOGENOM:HOG000028743 IPI:IPI00975588 SMR:Q5T413 STRING:Q5T413
Ensembl:ENST00000435155 Uniprot:Q5T413
Length = 291
Score = 116 (45.9 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 35/117 (29%), Positives = 53/117 (45%)
Query: 14 GDIPSSLDELL-LLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNRLGWVSQPGRKQK 72
G +P + + L LLPG+G A + ++ + G+ VD +V R+ R+ +
Sbjct: 182 GHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATGV-VDGNVARVLCRVRAIG------- 233
Query: 73 TSSPEQTREVLQLWLPKEEWV-PINP-----LLVGFGQTICTPIRPRCGMCSVSELC 123
+ P T QLW ++ V P P + G T+CTP RP C C V LC
Sbjct: 234 -ADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVESLC 289
>UNIPROTKB|Q9UIF7 [details] [associations]
symbol:MUTYH "A/G-specific adenine DNA glycosylase"
species:9606 "Homo sapiens" [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0016798 "hydrolase activity, acting on glycosyl
bonds" evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0006298 "mismatch
repair" evidence=TAS] [GO:0032405 "MutLalpha complex binding"
evidence=IDA] [GO:0032407 "MutSalpha complex binding" evidence=IDA]
[GO:0032408 "MutSbeta complex binding" evidence=IDA] [GO:0032406
"MutLbeta complex binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006281 "DNA repair" evidence=TAS] [GO:0006284 "base-excision
repair" evidence=TAS] [GO:0006285 "base-excision repair, AP site
formation" evidence=TAS] [GO:0045007 "depurination" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] Reactome:REACT_216
InterPro:IPR000086 InterPro:IPR003265 InterPro:IPR003651
InterPro:IPR004035 InterPro:IPR004036 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00730 PROSITE:PS00764 PROSITE:PS00893
PROSITE:PS01155 PROSITE:PS51462 SMART:SM00478 SMART:SM00525
GO:GO:0005739 GO:GO:0005654 GO:GO:0046872 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0045007 EMBL:CH471059 Gene3D:3.90.79.10 SUPFAM:SSF55811
GO:GO:0051539 GO:GO:0006298 GO:GO:0004519 MIM:613659 GO:GO:0016798
GO:GO:0032407 Orphanet:26106 EMBL:AL359540 KO:K03575 EMBL:U63329
EMBL:AB032920 EMBL:AB032921 EMBL:AB032922 EMBL:AB032923
EMBL:AB032924 EMBL:AB032925 EMBL:AB032926 EMBL:AB032927
EMBL:AB032928 EMBL:AB032929 EMBL:HQ205466 EMBL:HQ205468
EMBL:HQ205469 EMBL:HQ205470 EMBL:HQ205472 EMBL:HQ205473
EMBL:HQ205474 EMBL:HQ205475 EMBL:HQ205476 EMBL:HQ205477
EMBL:HQ205479 EMBL:HQ205480 EMBL:HQ205481 EMBL:HQ205482
EMBL:HQ205483 EMBL:HQ205484 EMBL:HQ205485 EMBL:HQ205486
EMBL:HQ205487 EMBL:HQ205488 EMBL:HQ205489 EMBL:HQ205490
EMBL:HQ205491 EMBL:HQ205492 EMBL:HQ205493 EMBL:HQ205494
EMBL:HQ205495 EMBL:HQ205496 EMBL:HQ205497 EMBL:HQ205498
EMBL:HQ205499 EMBL:HQ205500 EMBL:HQ205501 EMBL:HQ205502
EMBL:HQ205503 EMBL:HQ205505 EMBL:AF527839 EMBL:BC003178
IPI:IPI00414235 IPI:IPI00414236 IPI:IPI00414237 IPI:IPI00456700
IPI:IPI00746950 IPI:IPI00844241 RefSeq:NP_001041636.1
RefSeq:NP_001041637.1 RefSeq:NP_001041638.1 RefSeq:NP_001041639.1
RefSeq:NP_001121897.1 RefSeq:NP_036354.1 UniGene:Hs.271353 PDB:1X51
PDB:3N5N PDBsum:1X51 PDBsum:3N5N ProteinModelPortal:Q9UIF7
SMR:Q9UIF7 DIP:DIP-41972N IntAct:Q9UIF7 STRING:Q9UIF7
PhosphoSite:Q9UIF7 DMDM:48428272 PRIDE:Q9UIF7
Ensembl:ENST00000354383 Ensembl:ENST00000355498
Ensembl:ENST00000372098 Ensembl:ENST00000372100
Ensembl:ENST00000372104 Ensembl:ENST00000372110
Ensembl:ENST00000372115 Ensembl:ENST00000448481
Ensembl:ENST00000456914 GeneID:4595 KEGG:hsa:4595 UCSC:uc001cnf.3
UCSC:uc001cng.3 UCSC:uc001cnn.3 CTD:4595 GeneCards:GC01M045794
HGNC:HGNC:7527 HPA:HPA008732 MIM:604933 MIM:608456
neXtProt:NX_Q9UIF7 Orphanet:733 Orphanet:247798 PharmGKB:PA31328
eggNOG:COG1194 HOVERGEN:HBG052540 InParanoid:Q9UIF7
OrthoDB:EOG4HX50Q EvolutionaryTrace:Q9UIF7 GenomeRNAi:4595
NextBio:17664 ArrayExpress:Q9UIF7 Bgee:Q9UIF7 CleanEx:HS_MUTYH
Genevestigator:Q9UIF7 GermOnline:ENSG00000132781 Uniprot:Q9UIF7
Length = 546
Score = 116 (45.9 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 35/117 (29%), Positives = 53/117 (45%)
Query: 14 GDIPSSLDELL-LLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNRLGWVSQPGRKQK 72
G +P + + L LLPG+G A + ++ + G+ VD +V R+ R+ +
Sbjct: 196 GHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATGV-VDGNVARVLCRVRAIG------- 247
Query: 73 TSSPEQTREVLQLWLPKEEWV-PINP-----LLVGFGQTICTPIRPRCGMCSVSELC 123
+ P T QLW ++ V P P + G T+CTP RP C C V LC
Sbjct: 248 -ADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVESLC 303
>UNIPROTKB|E5KP25 [details] [associations]
symbol:MUTYH "A/G-specific adenine DNA glycosylase"
species:9606 "Homo sapiens" [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR000086
InterPro:IPR003265 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR011257 InterPro:IPR015797
Pfam:PF00730 PROSITE:PS00764 PROSITE:PS01155 PROSITE:PS51462
SMART:SM00478 SMART:SM00525 GO:GO:0005634 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0051539
GO:GO:0004519 EMBL:AL359540 KO:K03575 EMBL:HQ205466 EMBL:HQ205468
EMBL:HQ205469 EMBL:HQ205470 EMBL:HQ205472 EMBL:HQ205473
EMBL:HQ205474 EMBL:HQ205475 EMBL:HQ205476 EMBL:HQ205477
EMBL:HQ205479 EMBL:HQ205480 EMBL:HQ205481 EMBL:HQ205482
EMBL:HQ205483 EMBL:HQ205484 EMBL:HQ205485 EMBL:HQ205486
EMBL:HQ205487 EMBL:HQ205488 EMBL:HQ205489 EMBL:HQ205490
EMBL:HQ205491 EMBL:HQ205492 EMBL:HQ205493 EMBL:HQ205494
EMBL:HQ205495 EMBL:HQ205496 EMBL:HQ205497 EMBL:HQ205498
EMBL:HQ205499 EMBL:HQ205500 EMBL:HQ205501 EMBL:HQ205502
EMBL:HQ205503 EMBL:HQ205505 IPI:IPI00414236 RefSeq:NP_001121897.1
UniGene:Hs.271353 GeneID:4595 KEGG:hsa:4595 CTD:4595 HGNC:HGNC:7527
GenomeRNAi:4595 NextBio:17664 OMA:HLGEVVH SMR:E5KP25
Ensembl:ENST00000450313 UCSC:uc009vxp.3 Uniprot:E5KP25
Length = 549
Score = 116 (45.9 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 35/117 (29%), Positives = 53/117 (45%)
Query: 14 GDIPSSLDELL-LLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNRLGWVSQPGRKQK 72
G +P + + L LLPG+G A + ++ + G+ VD +V R+ R+ +
Sbjct: 199 GHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATGV-VDGNVARVLCRVRAIG------- 250
Query: 73 TSSPEQTREVLQLWLPKEEWV-PINP-----LLVGFGQTICTPIRPRCGMCSVSELC 123
+ P T QLW ++ V P P + G T+CTP RP C C V LC
Sbjct: 251 -ADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVESLC 306
>TIGR_CMR|BA_0522 [details] [associations]
symbol:BA_0522 "A/G-specific adenine glycosylase"
species:198094 "Bacillus anthracis str. Ames" [GO:0006281 "DNA
repair" evidence=ISS] [GO:0019104 "DNA N-glycosylase activity"
evidence=ISS] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004035 InterPro:IPR005760
InterPro:IPR011257 InterPro:IPR015797 Pfam:PF00633 Pfam:PF00730
PROSITE:PS00764 SMART:SM00478 SMART:SM00525 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003677 Gene3D:3.90.79.10
SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0005622 GO:GO:0004519
GO:GO:0019104 KO:K03575 HOGENOM:HOG000028743 TIGRFAMs:TIGR01084
HSSP:P17802 OMA:QAVKPYF RefSeq:NP_843058.1 RefSeq:YP_017141.1
RefSeq:YP_026771.1 ProteinModelPortal:Q81YV8 SMR:Q81YV8
DNASU:1087779 EnsemblBacteria:EBBACT00000010013
EnsemblBacteria:EBBACT00000017545 EnsemblBacteria:EBBACT00000019690
GeneID:1087779 GeneID:2817839 GeneID:2853132 KEGG:ban:BA_0522
KEGG:bar:GBAA_0522 KEGG:bat:BAS0491 ProtClustDB:CLSK886914
BioCyc:BANT260799:GJAJ-534-MONOMER
BioCyc:BANT261594:GJ7F-559-MONOMER Uniprot:Q81YV8
Length = 365
Score = 111 (44.1 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 33/114 (28%), Positives = 52/114 (45%)
Query: 12 YDGDIPSSLDELLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNRLGWVSQPGRKQ 71
Y G +PS + ++ L G+GP ++++ + + VD +V R+ +R+ V K
Sbjct: 107 YGGIVPSDVKKIEKLKGVGPYTKGAILSIAYG-IPEPAVDGNVVRVLSRILSVWDDIAKP 165
Query: 72 KTSS--PEQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRCGMCSVSELC 123
KT E RE++ P N L+ G IC P P C +C V E C
Sbjct: 166 KTRKVFEEIVREIISAENPSY----FNQGLMELGALICIPKNPACLLCPVREHC 215
>UNIPROTKB|P17802 [details] [associations]
symbol:mutY "adenine glycosylase; G.C --> T.A
transversions" species:83333 "Escherichia coli K-12" [GO:0019104
"DNA N-glycosylase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0051539
"4 iron, 4 sulfur cluster binding" evidence=IEA] [GO:0051536
"iron-sulfur cluster binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016798 "hydrolase activity, acting on
glycosyl bonds" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA;IDA] [GO:0006284 "base-excision repair"
evidence=IEA;IDA] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003583 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR005760 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00633 Pfam:PF00730 Pfam:PF10576
PROSITE:PS00764 PROSITE:PS01155 SMART:SM00278 SMART:SM00478
SMART:SM00525 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046872 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 Gene3D:3.90.79.10 SUPFAM:SSF55811
GO:GO:0051539 GO:GO:0005622 GO:GO:0016787 DrugBank:DB00173
EMBL:U28377 GO:GO:0004519 GO:GO:0019104 KO:K03575 eggNOG:COG1194
TIGRFAMs:TIGR01084 EMBL:X52391 EMBL:M59471 PIR:B38535
RefSeq:NP_417436.1 RefSeq:YP_491160.1 PDB:1KG2 PDB:1KG3 PDB:1KG4
PDB:1KG5 PDB:1KG6 PDB:1KG7 PDB:1KQJ PDB:1MUD PDB:1MUN PDB:1MUY
PDB:1WEF PDB:1WEG PDB:1WEI PDBsum:1KG2 PDBsum:1KG3 PDBsum:1KG4
PDBsum:1KG5 PDBsum:1KG6 PDBsum:1KG7 PDBsum:1KQJ PDBsum:1MUD
PDBsum:1MUN PDBsum:1MUY PDBsum:1WEF PDBsum:1WEG PDBsum:1WEI
ProteinModelPortal:P17802 SMR:P17802 DIP:DIP-10289N IntAct:P17802
MINT:MINT-1240449 PRIDE:P17802 EnsemblBacteria:EBESCT00000003975
EnsemblBacteria:EBESCT00000004732 EnsemblBacteria:EBESCT00000004734
EnsemblBacteria:EBESCT00000004736 EnsemblBacteria:EBESCT00000018160
EnsemblBacteria:EBESCT00000232596 EnsemblBacteria:EBESCT00000232600
GeneID:12933365 GeneID:947447 KEGG:ecj:Y75_p2891 KEGG:eco:b2961
PATRIC:32121336 EchoBASE:EB0622 EcoGene:EG10627
HOGENOM:HOG000028744 OMA:FHLDIQP ProtClustDB:PRK10880
BioCyc:EcoCyc:EG10627-MONOMER BioCyc:ECOL316407:JW2928-MONOMER
EvolutionaryTrace:P17802 Genevestigator:P17802 Uniprot:P17802
Length = 350
Score = 110 (43.8 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 32/124 (25%), Positives = 57/124 (45%)
Query: 1 MKKIAPICLTKYDGDIPSSLDELLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNR 60
+ K A T + G P + +E+ LPG+G A ++++ I +D +V R+ R
Sbjct: 89 LHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPI-LDGNVKRVLAR 147
Query: 61 LGWVSQ-PGRKQKTSSPEQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRCGMCSV 119
VS PG+K+ + E + + E + N ++ G ICT +P+C +C +
Sbjct: 148 CYAVSGWPGKKEVENKLWSLSEQVTPAVGVERF---NQAMMDLGAMICTRSKPKCSLCPL 204
Query: 120 SELC 123
C
Sbjct: 205 QNGC 208
>MGI|MGI:1917853 [details] [associations]
symbol:Mutyh "mutY homolog (E. coli)" species:10090 "Mus
musculus" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=ISO;IDA] [GO:0006281 "DNA repair" evidence=TAS]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0006979
"response to oxidative stress" evidence=ISO] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016798 "hydrolase activity, acting on glycosyl
bonds" evidence=IEA] [GO:0019104 "DNA N-glycosylase activity"
evidence=ISO;TAS] [GO:0032407 "MutSalpha complex binding"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051536 "iron-sulfur cluster binding" evidence=IEA] [GO:0051539
"4 iron, 4 sulfur cluster binding" evidence=IEA] InterPro:IPR000086
InterPro:IPR003265 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR011257 InterPro:IPR015797
Pfam:PF00730 Pfam:PF10576 PROSITE:PS00764 PROSITE:PS00893
PROSITE:PS01155 PROSITE:PS51462 SMART:SM00478 SMART:SM00525
MGI:MGI:1917853 GO:GO:0005739 GO:GO:0005634 GO:GO:0046872
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0006281
Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0004519
GO:GO:0019104 KO:K03575 CTD:4595 eggNOG:COG1194 HOVERGEN:HBG052540
OrthoDB:EOG4HX50Q EMBL:AY007717 EMBL:AB117938 EMBL:AL683847
EMBL:BC057942 IPI:IPI00620073 RefSeq:NP_001153053.1
RefSeq:NP_573513.2 UniGene:Mm.180333 ProteinModelPortal:Q99P21
SMR:Q99P21 STRING:Q99P21 PhosphoSite:Q99P21 PRIDE:Q99P21
Ensembl:ENSMUST00000102699 GeneID:70603 KEGG:mmu:70603
GeneTree:ENSGT00510000047220 HOGENOM:HOG000028743 InParanoid:A2AGE3
OMA:HLGEVVH NextBio:331956 Bgee:Q99P21 CleanEx:MM_MUTYH
Genevestigator:Q99P21 GermOnline:ENSMUSG00000028687 Uniprot:Q99P21
Length = 515
Score = 112 (44.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 35/117 (29%), Positives = 54/117 (46%)
Query: 14 GDIPSSLDELL-LLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNRLGWVSQPGRKQK 72
G +P + + L LLPG+G A + ++ ++ V G+ VD +V R+ R+ +
Sbjct: 170 GHMPRTAETLQQLLPGVGRYTAGAIASIAFDQVTGV-VDGNVLRVLCRVRAIG------- 221
Query: 73 TSSPEQTREVLQLWLPKEEWV-PINP-----LLVGFGQTICTPIRPRCGMCSVSELC 123
+ P T LW ++ V P P + G T+CTP RP C C V LC
Sbjct: 222 -ADPTSTLVSHHLWNLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSHCPVQSLC 277
>RGD|620045 [details] [associations]
symbol:Mutyh "mutY homolog (E. coli)" species:10116 "Rattus
norvegicus" [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO;IDA] [GO:0005739
"mitochondrion" evidence=IEA;ISO;IDA] [GO:0006284 "base-excision
repair" evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IDA] [GO:0019104 "DNA N-glycosylase activity"
evidence=IEA;IDA] [GO:0032407 "MutSalpha complex binding"
evidence=IEA;ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0032405 "MutLalpha complex binding" evidence=ISO] [GO:0032406
"MutLbeta complex binding" evidence=ISO] [GO:0032408 "MutSbeta
complex binding" evidence=ISO] InterPro:IPR000086
InterPro:IPR003265 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR005760 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00730 PROSITE:PS00764 PROSITE:PS00893
PROSITE:PS01155 PROSITE:PS51462 SMART:SM00478 SMART:SM00525
RGD:620045 GO:GO:0005739 GO:GO:0005634 GO:GO:0006979 GO:GO:0046872
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 Gene3D:3.90.79.10
SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0004519 GO:GO:0019104 KO:K03575
CTD:4595 eggNOG:COG1194 HOVERGEN:HBG052540 OrthoDB:EOG4HX50Q
HOGENOM:HOG000028743 EMBL:AF478683 IPI:IPI00201702
RefSeq:NP_579850.1 UniGene:Rn.44045 ProteinModelPortal:Q8R5G2
STRING:Q8R5G2 PhosphoSite:Q8R5G2 PRIDE:Q8R5G2 GeneID:170841
KEGG:rno:170841 UCSC:RGD:620045 InParanoid:Q8R5G2 NextBio:621257
Genevestigator:Q8R5G2 GermOnline:ENSRNOG00000017887
TIGRFAMs:TIGR01084 Uniprot:Q8R5G2
Length = 516
Score = 112 (44.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 31/111 (27%), Positives = 50/111 (45%)
Query: 14 GDIPSSLDELL-LLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNRLGWVSQPGRKQK 72
G +P + + L LLPG+G A + ++ ++ V G+ VD +V R+ R+ +
Sbjct: 170 GHVPRTAETLQQLLPGVGRYTAGAIASIAFDQVTGV-VDGNVIRVLCRVRAIGADPTSSF 228
Query: 73 TSSPEQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRCGMCSVSELC 123
S ++ Q + N + G T+CTP RP C C V LC
Sbjct: 229 VS--HHLWDLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCNHCPVQSLC 277
>UNIPROTKB|Q8R5G2 [details] [associations]
symbol:Mutyh "A/G-specific adenine DNA glycosylase"
species:10116 "Rattus norvegicus" [GO:0004519 "endonuclease
activity" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA] InterPro:IPR000086 InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004035 InterPro:IPR004036
InterPro:IPR005760 InterPro:IPR011257 InterPro:IPR015797
Pfam:PF00730 PROSITE:PS00764 PROSITE:PS00893 PROSITE:PS01155
PROSITE:PS51462 SMART:SM00478 SMART:SM00525 RGD:620045
GO:GO:0005739 GO:GO:0005634 GO:GO:0006979 GO:GO:0046872
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 Gene3D:3.90.79.10
SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0004519 GO:GO:0019104 KO:K03575
CTD:4595 eggNOG:COG1194 HOVERGEN:HBG052540 OrthoDB:EOG4HX50Q
HOGENOM:HOG000028743 EMBL:AF478683 IPI:IPI00201702
RefSeq:NP_579850.1 UniGene:Rn.44045 ProteinModelPortal:Q8R5G2
STRING:Q8R5G2 PhosphoSite:Q8R5G2 PRIDE:Q8R5G2 GeneID:170841
KEGG:rno:170841 UCSC:RGD:620045 InParanoid:Q8R5G2 NextBio:621257
Genevestigator:Q8R5G2 GermOnline:ENSRNOG00000017887
TIGRFAMs:TIGR01084 Uniprot:Q8R5G2
Length = 516
Score = 112 (44.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 31/111 (27%), Positives = 50/111 (45%)
Query: 14 GDIPSSLDELL-LLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNRLGWVSQPGRKQK 72
G +P + + L LLPG+G A + ++ ++ V G+ VD +V R+ R+ +
Sbjct: 170 GHVPRTAETLQQLLPGVGRYTAGAIASIAFDQVTGV-VDGNVIRVLCRVRAIGADPTSSF 228
Query: 73 TSSPEQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRCGMCSVSELC 123
S ++ Q + N + G T+CTP RP C C V LC
Sbjct: 229 VS--HHLWDLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCNHCPVQSLC 277
>GENEDB_PFALCIPARUM|PF11_0306 [details] [associations]
symbol:PF11_0306 "A/G-specific adenine
glycosylase, putative" species:5833 "Plasmodium falciparum"
[GO:0000703 "oxidized pyrimidine nucleobase lesion DNA
N-glycosylase activity" evidence=ISS] [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR003265 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00730 SMART:SM00478 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 Gene3D:3.90.79.10 EMBL:AE014186 GO:GO:0000703
KO:K03575 RefSeq:XP_001347977.2 ProteinModelPortal:Q8II68
EnsemblProtists:PF11_0306:mRNA GeneID:810853 KEGG:pfa:PF11_0306
EuPathDB:PlasmoDB:PF3D7_1129500 HOGENOM:HOG000282401
ProtClustDB:CLSZ2446653 Uniprot:Q8II68
Length = 613
Score = 106 (42.4 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 29/118 (24%), Positives = 55/118 (46%)
Query: 7 ICLTKYDGDIPSSLDELLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNRL-GWVS 65
I + KY+G P+ L L LPGIG + + + N + IC+DT++ RI +R+ ++
Sbjct: 276 IVVDKYNGIFPNDLKLLKTLPGIGDYTSKAIC-IHLYNRKDICIDTNIIRIFSRITDTIN 334
Query: 66 QPGRKQKTSSPEQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRCGMCSVSELC 123
E+ E+L + + ++ + G ++C P C C +++ C
Sbjct: 335 YYNSGTLLKHCEKVSEIL--CSGESNYSDLSQAFMDLGSSVCNN-SPDCSQCPINKYC 389
>UNIPROTKB|Q8II68 [details] [associations]
symbol:PF11_0306 "A/G-specific adenine glycosylase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000703
"oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity"
evidence=ISS] [GO:0020011 "apicoplast" evidence=RCA]
InterPro:IPR003265 InterPro:IPR011257 InterPro:IPR015797
Pfam:PF00730 SMART:SM00478 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
Gene3D:3.90.79.10 EMBL:AE014186 GO:GO:0000703 KO:K03575
RefSeq:XP_001347977.2 ProteinModelPortal:Q8II68
EnsemblProtists:PF11_0306:mRNA GeneID:810853 KEGG:pfa:PF11_0306
EuPathDB:PlasmoDB:PF3D7_1129500 HOGENOM:HOG000282401
ProtClustDB:CLSZ2446653 Uniprot:Q8II68
Length = 613
Score = 106 (42.4 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 29/118 (24%), Positives = 55/118 (46%)
Query: 7 ICLTKYDGDIPSSLDELLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNRL-GWVS 65
I + KY+G P+ L L LPGIG + + + N + IC+DT++ RI +R+ ++
Sbjct: 276 IVVDKYNGIFPNDLKLLKTLPGIGDYTSKAIC-IHLYNRKDICIDTNIIRIFSRITDTIN 334
Query: 66 QPGRKQKTSSPEQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRCGMCSVSELC 123
E+ E+L + + ++ + G ++C P C C +++ C
Sbjct: 335 YYNSGTLLKHCEKVSEIL--CSGESNYSDLSQAFMDLGSSVCNN-SPDCSQCPINKYC 389
>UNIPROTKB|F1S368 [details] [associations]
symbol:MUTYH "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0032407 "MutSalpha complex binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA]
InterPro:IPR000086 InterPro:IPR003265 InterPro:IPR003651
InterPro:IPR004036 InterPro:IPR011257 InterPro:IPR015797
Pfam:PF00293 Pfam:PF00730 PROSITE:PS01155 PROSITE:PS51462
SMART:SM00478 SMART:SM00525 GO:GO:0005739 GO:GO:0005634
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 Gene3D:3.90.79.10
SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0004519
GeneTree:ENSGT00510000047220 OMA:HLGEVVH EMBL:CU657926
Ensembl:ENSSSCT00000004334 Uniprot:F1S368
Length = 524
Score = 104 (41.7 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 29/111 (26%), Positives = 47/111 (42%)
Query: 14 GDIPSSLDELL-LLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNRLGWVSQPGRKQK 72
G +P + + L LLPG+G A + ++ + G+ +V R+ R+ + R
Sbjct: 173 GHMPRTAETLQRLLPGVGRYTAGAIASIAFGQAAGVMYG-NVFRVLCRVRAIGADPRSTL 231
Query: 73 TSSPEQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRCGMCSVSELC 123
S +Q + Q + N + G T+CTP P C C V LC
Sbjct: 232 VS--QQLWSLAQQLVDPARPGDFNQAAMELGATVCTPQHPLCSQCPVQSLC 280
>UNIPROTKB|F1P514 [details] [associations]
symbol:MUTYH "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0051539 "4
iron, 4 sulfur cluster binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0032407
"MutSalpha complex binding" evidence=IEA] InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004035 InterPro:IPR004036
InterPro:IPR011257 InterPro:IPR015797 Pfam:PF00730 PROSITE:PS00764
PROSITE:PS01155 SMART:SM00478 SMART:SM00525 GO:GO:0005739
GO:GO:0005634 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 Gene3D:3.90.79.10
SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0004519
GeneTree:ENSGT00510000047220 EMBL:AADN02012669 IPI:IPI00821549
Ensembl:ENSGALT00000038451 Uniprot:F1P514
Length = 398
Score = 102 (41.0 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 30/124 (24%), Positives = 57/124 (45%)
Query: 1 MKKIAPICLTKYDGDIPSSLDELL-LLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICN 59
+++ A +++ G +P + ++L LLPG+G A + ++ + G+ VD +V R+
Sbjct: 102 LQEAARKVVSELAGRMPRTAEDLQRLLPGVGRYTAGAIASISFGQATGV-VDGNVIRVLC 160
Query: 60 RLGWVSQPGRKQKTSSPEQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRCGMCSV 119
RL + + + ++ + + N L+ G T+CTP P C C V
Sbjct: 161 RLRCIGAD--TSSLAVIDCLWDMANTLVDRSRPGDFNQALMELGATVCTPKSPLCRECPV 218
Query: 120 SELC 123
E C
Sbjct: 219 KEHC 222
>UNIPROTKB|E1BZT8 [details] [associations]
symbol:MUTYH "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0051539 "4
iron, 4 sulfur cluster binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0032407
"MutSalpha complex binding" evidence=IEA] InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004035 InterPro:IPR004036
InterPro:IPR011257 InterPro:IPR015797 Pfam:PF00730 PROSITE:PS00764
PROSITE:PS01155 SMART:SM00478 SMART:SM00525 GO:GO:0005739
GO:GO:0005634 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 Gene3D:3.90.79.10
SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0004519
GeneTree:ENSGT00510000047220 EMBL:AADN02012669 IPI:IPI00595820
ProteinModelPortal:E1BZT8 Ensembl:ENSGALT00000016624 Uniprot:E1BZT8
Length = 461
Score = 102 (41.0 bits), Expect = 0.00011, P = 0.00011
Identities = 30/124 (24%), Positives = 57/124 (45%)
Query: 1 MKKIAPICLTKYDGDIPSSLDELL-LLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICN 59
+++ A +++ G +P + ++L LLPG+G A + ++ + G+ VD +V R+
Sbjct: 148 LQEAARKVVSELAGRMPRTAEDLQRLLPGVGRYTAGAIASISFGQATGV-VDGNVIRVLC 206
Query: 60 RLGWVSQPGRKQKTSSPEQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRCGMCSV 119
RL + + + ++ + + N L+ G T+CTP P C C V
Sbjct: 207 RLRCIGAD--TSSLAVIDCLWDMANTLVDRSRPGDFNQALMELGATVCTPKSPLCRECPV 264
Query: 120 SELC 123
E C
Sbjct: 265 KEHC 268
>TAIR|locus:2135828 [details] [associations]
symbol:AT4G12740 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=IEA;ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006306 "DNA methylation"
evidence=RCA] InterPro:IPR003265 InterPro:IPR003583
InterPro:IPR011257 InterPro:IPR015797 Pfam:PF00730 PROSITE:PS00764
PROSITE:PS00893 PROSITE:PS01155 PROSITE:PS51462 SMART:SM00278
SMART:SM00478 EMBL:CP002687 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0003677 Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0016787
EMBL:AL049640 EMBL:AL161534 IPI:IPI00528123 PIR:T06632
RefSeq:NP_193010.2 UniGene:At.54294 ProteinModelPortal:F4JRF4
SMR:F4JRF4 PRIDE:F4JRF4 EnsemblPlants:AT4G12740.1 GeneID:826886
KEGG:ath:AT4G12740 GeneFarm:2854 TAIR:At4g12740 KO:K03575
OMA:FWKLAAQ Uniprot:F4JRF4
Length = 630
Score = 103 (41.3 bits), Expect = 0.00013, P = 0.00013
Identities = 30/107 (28%), Positives = 48/107 (44%)
Query: 17 PSSLDELLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNRLGWVSQPGRKQKTSSP 76
P+ L+ + GIG A + ++ +N + VD +V R+ RL +S K + ++
Sbjct: 254 PNQASSLMKVKGIGQYTAGAIASIAFNEAVPV-VDGNVIRVLARLKAISA-NPKDRLTAR 311
Query: 77 EQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRCGMCSVSELC 123
+ QL P N L+ G T+CT +P C C VS C
Sbjct: 312 NFWKLAAQLVDPSRPG-DFNQSLMELGATLCTVSKPSCSSCPVSSQC 357
>DICTYBASE|DDB_G0270764 [details] [associations]
symbol:myh "monofunctional DNA glycosylase"
species:44689 "Dictyostelium discoideum" [GO:0051539 "4 iron, 4
sulfur cluster binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA;ISS] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0006298 "mismatch repair"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR003265 InterPro:IPR003651 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00730 SMART:SM00478 SMART:SM00525
dictyBase:DDB_G0270764 GO:GO:0005634 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0006298
GO:GO:0004519 KO:K03575 eggNOG:COG1194 RefSeq:XP_001134477.1
ProteinModelPortal:Q1ZXP7 STRING:Q1ZXP7 EnsemblProtists:DDB0232996
GeneID:8617615 KEGG:ddi:DDB_G0270764 InParanoid:Q1ZXP7 OMA:RSIGANP
ProtClustDB:CLSZ2847450 Uniprot:Q1ZXP7
Length = 574
Score = 101 (40.6 bits), Expect = 0.00019, P = 0.00019
Identities = 34/114 (29%), Positives = 52/114 (45%)
Query: 12 YDGDIPSSLDELLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNRLGWVSQPGRKQ 71
++ IPS + LL + GIGP A + ++ +N + VD +V R+ +R V G
Sbjct: 199 FNSKIPSDVKSLLEINGIGPYTAGAISSIAFNKPVPL-VDGNVIRVLSR---VRSIGANP 254
Query: 72 KTSSPEQTREVLQLWLPKEEWVP--INPLLVGFGQTICTPIRPRCGMCSVSELC 123
K SS + L L + P N L+ G TIC+ P+C C + C
Sbjct: 255 KLSSTVKLFWELGNDLVESVENPCNFNQSLMELGATICSVQSPQCKQCPIQSNC 308
>TAIR|locus:2100138 [details] [associations]
symbol:DML2 "demeter-like 2" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=IEA;ISS] [GO:0051539 "4
iron, 4 sulfur cluster binding" evidence=IEA] [GO:0006306 "DNA
methylation" evidence=RCA] InterPro:IPR003265 InterPro:IPR003651
InterPro:IPR011257 Pfam:PF00730 PROSITE:PS00764 SMART:SM00525
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006355
GO:GO:0046872 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677 GO:GO:0006351
GO:GO:0051539 GO:GO:0004519 eggNOG:COG0177 EMBL:AC010927
IPI:IPI00533587 RefSeq:NP_187612.5 UniGene:At.40005
ProteinModelPortal:Q9SR66 STRING:Q9SR66 PaxDb:Q9SR66 PRIDE:Q9SR66
GeneID:820162 KEGG:ath:AT3G10010 TAIR:At3g10010 InParanoid:Q9SR66
OMA:STHCELN Genevestigator:Q9SR66 GermOnline:AT3G10010
Uniprot:Q9SR66
Length = 1332
Score = 104 (41.7 bits), Expect = 0.00025, P = 0.00025
Identities = 34/122 (27%), Positives = 56/122 (45%)
Query: 15 DIP--SSLDELLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNRLGWVS-QPGRKQ 71
D+P + + LL + G+G K V + + + VDT+V RI RLGWV QP +
Sbjct: 866 DVPPDKAKEYLLSINGLGLKSVECVRLLSLHQI-AFPVDTNVGRIAVRLGWVPLQPLPDE 924
Query: 72 KTSSPEQTREVLQ-----LW-----LPKEEWVPINPLLVGFGQTICTPIRPRCGMCSVSE 121
+ VL+ LW L ++ ++ ++ FG+ CT ++P C C +
Sbjct: 925 LQMHLLELYPVLESVQKYLWPRLCKLDQKTLYELHYHMITFGKVFCTKVKPNCNACPMKA 984
Query: 122 LC 123
C
Sbjct: 985 EC 986
>ZFIN|ZDB-GENE-070112-932 [details] [associations]
symbol:ogg1 "8-oxoguanine DNA glycosylase"
species:7955 "Danio rerio" [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008534 "oxidized purine nucleobase lesion DNA
N-glycosylase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR003265
InterPro:IPR011257 InterPro:IPR012904 Pfam:PF00730 Pfam:PF07934
SMART:SM00478 ZFIN:ZDB-GENE-070112-932 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003684 GO:GO:0006289 GO:GO:0008534
KO:K03660 CTD:4968 GeneTree:ENSGT00640000091554 HOVERGEN:HBG001047
OrthoDB:EOG4P8FJN HOGENOM:HOG000180756 EMBL:AL935148 EMBL:CR450703
IPI:IPI00803741 RefSeq:NP_001116780.1 UniGene:Dr.65762
Ensembl:ENSDART00000084081 GeneID:791194 KEGG:dre:791194
OMA:AWEALIG NextBio:20930595 Uniprot:B0R135
Length = 391
Score = 97 (39.2 bits), Expect = 0.00030, P = 0.00030
Identities = 26/76 (34%), Positives = 38/76 (50%)
Query: 21 DELLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNRLGWVSQPGRKQKTSSPEQTR 80
D L LPG+G K+A V + + + + VDTHV +I R + PG QKT + +
Sbjct: 265 DALRTLPGVGLKVADCVCLMSLDKFEALPVDTHVWQIAKR-DYNFAPGTSQKTLTDRVYK 323
Query: 81 EV----LQLWLPKEEW 92
E+ +LW P W
Sbjct: 324 EIGDFYRKLWGPYAGW 339
>UNIPROTKB|E2RG99 [details] [associations]
symbol:MUTYH "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0019104 "DNA N-glycosylase activity"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0004519 "endonuclease
activity" evidence=IEA] InterPro:IPR000086 InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004036 InterPro:IPR005760
InterPro:IPR011257 InterPro:IPR015797 Pfam:PF00730 PROSITE:PS01155
PROSITE:PS51462 SMART:SM00478 SMART:SM00525 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0051539
GO:GO:0005622 GO:GO:0004519 GO:GO:0019104
GeneTree:ENSGT00510000047220 OMA:HLGEVVH TIGRFAMs:TIGR01084
EMBL:AAEX03009783 Ensembl:ENSCAFT00000007437 Uniprot:E2RG99
Length = 636
Score = 99 (39.9 bits), Expect = 0.00036, P = 0.00036
Identities = 28/111 (25%), Positives = 46/111 (41%)
Query: 14 GDIPSSLDELL-LLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNRLGWVSQPGRKQK 72
G +P + + L LLPG+G A + ++ + G+ VD +V R+ R+ +
Sbjct: 285 GHVPHTAETLQRLLPGVGRYTAGAIASIAFGQATGV-VDGNVIRVLCRVRAIGADSSSTL 343
Query: 73 TSSPEQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRCGMCSVSELC 123
S + + Q + N + G +CTP P C C V LC
Sbjct: 344 VS--QHLWGLAQQLVDPARPGDFNQAAMELGALVCTPQHPHCSQCPVRSLC 392
>TAIR|locus:2124301 [details] [associations]
symbol:DML3 "demeter-like protein 3" species:3702
"Arabidopsis thaliana" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0010216 "maintenance of DNA methylation" evidence=IMP]
[GO:0019104 "DNA N-glycosylase activity" evidence=IDA]
InterPro:IPR003265 InterPro:IPR003651 InterPro:IPR011257
PROSITE:PS00764 SMART:SM00478 SMART:SM00525 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0046872
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677 GO:GO:0006351
GO:GO:0051539 GO:GO:0004519 EMBL:AL021961 EMBL:AL161584
GO:GO:0010216 eggNOG:COG0177 GO:GO:0019104 EMBL:AY735663
IPI:IPI00525973 PIR:T05430 RefSeq:NP_195132.3 UniGene:At.51042
ProteinModelPortal:O49498 SMR:O49498 STRING:O49498 PRIDE:O49498
EnsemblPlants:AT4G34060.1 GeneID:829552 KEGG:ath:AT4G34060
TAIR:At4g34060 HOGENOM:HOG000064650 OMA:WARIASS PhylomeDB:O49498
ProtClustDB:CLSN2681626 Genevestigator:O49498 Uniprot:O49498
Length = 1044
Score = 101 (40.6 bits), Expect = 0.00040, P = 0.00040
Identities = 38/120 (31%), Positives = 55/120 (45%)
Query: 17 PSSLDE--LLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNRLGWVS-QP---GRK 70
PS L + LL + GIG K A V +G + VDT+V RI RLG V +P G +
Sbjct: 576 PSHLVKRYLLEIEGIGLKSAECVRLLGLKH-HAFPVDTNVGRIAVRLGLVPLEPLPNGVQ 634
Query: 71 QKTSSPEQTREVLQ--LW-----LPKEEWVPINPLLVGFGQTICTPIRPRCGMCSVSELC 123
+ + +Q LW LP+E ++ ++ FG+ CT P C C + C
Sbjct: 635 MHQLFEYPSMDSIQKYLWPRLCKLPQETLYELHYQMITFGKVFCTKTIPNCNACPMKSEC 694
>UNIPROTKB|F1N4K4 [details] [associations]
symbol:MUTYH "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032407 "MutSalpha complex binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA]
InterPro:IPR000086 InterPro:IPR003265 InterPro:IPR003651
InterPro:IPR004035 InterPro:IPR004036 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00730 Pfam:PF10576 PROSITE:PS00764
PROSITE:PS01155 PROSITE:PS51462 SMART:SM00478 SMART:SM00525
GO:GO:0005739 GO:GO:0005634 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0004519
GeneTree:ENSGT00510000047220 OMA:HLGEVVH EMBL:DAAA02009006
IPI:IPI00703676 UniGene:Bt.38838 Ensembl:ENSBTAT00000014928
NextBio:20870678 Uniprot:F1N4K4
Length = 526
Score = 97 (39.2 bits), Expect = 0.00046, P = 0.00046
Identities = 28/111 (25%), Positives = 46/111 (41%)
Query: 14 GDIPSSLDELL-LLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNRLGWVSQPGRKQK 72
G +P + + L LPG+G A + ++ + G+ VD +V R+ R+ +
Sbjct: 173 GHMPRTAETLQQFLPGVGRYTAGAIASIAFGQAAGV-VDGNVIRVLCRVRAIGADSSSTL 231
Query: 73 TSSPEQTREVLQLWLPKEEWVPINPLLVGFGQTICTPIRPRCGMCSVSELC 123
S + + Q + N + G +CTP RP C C V LC
Sbjct: 232 VS--QHLWSLAQQLVDPARPGDFNQAAMELGAIVCTPKRPLCSHCPVQNLC 280
>TAIR|locus:2184432 [details] [associations]
symbol:DME "DEMETER" species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0004519
"endonuclease activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;ISS] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0051539 "4
iron, 4 sulfur cluster binding" evidence=IEA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=IMP] [GO:0019104 "DNA
N-glycosylase activity" evidence=ISS;IDA] [GO:0043078 "polar
nucleus" evidence=IDA] [GO:0006349 "regulation of gene expression
by genetic imprinting" evidence=IMP] [GO:0003906 "DNA-(apurinic or
apyrimidinic site) lyase activity" evidence=IDA] [GO:0006306 "DNA
methylation" evidence=RCA;IDA] InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR011257 Pfam:PF00730 PROSITE:PS00764
SMART:SM00525 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
GO:GO:0046872 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677 GO:GO:0006351
GO:GO:0051539 GO:GO:0009793 GO:GO:0043078 GO:GO:0006306
GO:GO:0004519 GO:GO:0003906 GO:GO:0006349 EMBL:AF521596
EMBL:DQ335243 EMBL:AL162875 EMBL:AK117994 EMBL:BT005357
IPI:IPI00516439 IPI:IPI00534354 IPI:IPI00760328 PIR:T48452
PIR:T48453 PIR:T48454 RefSeq:NP_001078527.1 RefSeq:NP_196076.2
UniGene:At.33104 ProteinModelPortal:Q8LK56 SMR:Q8LK56 STRING:Q8LK56
PaxDb:Q8LK56 PRIDE:Q8LK56 EnsemblPlants:AT5G04560.2 GeneID:830335
KEGG:ath:AT5G04560 TAIR:At5g04560 eggNOG:COG0177
HOGENOM:HOG000112227 InParanoid:Q8LK56 OMA:CTEITES PhylomeDB:Q8LK56
ProtClustDB:CLSN2690787 Genevestigator:Q8LK56 GO:GO:0019104
Uniprot:Q8LK56
Length = 1987
Score = 101 (40.6 bits), Expect = 0.00081, P = 0.00081
Identities = 35/114 (30%), Positives = 51/114 (44%)
Query: 21 DELLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNRLGWVS-QPGRKQKTSSPEQT 79
D LL + G+G K V + +N+ VDT+V RI R+GWV QP + +
Sbjct: 1533 DYLLSIRGLGLKSVECVRLLTLHNL-AFPVDTNVGRIAVRMGWVPLQPLPESLQLHLLEL 1591
Query: 80 REVLQ-----LW-----LPKEEWVPINPLLVGFGQTICTPIRPRCGMCSVSELC 123
VL+ LW L + ++ L+ FG+ CT RP C C + C
Sbjct: 1592 YPVLESIQKFLWPRLCKLDQRTLYELHYQLITFGKVFCTKSRPNCNACPMRGEC 1645
>ZFIN|ZDB-GENE-081104-193 [details] [associations]
symbol:mutyh "mutY homolog (E. coli)" species:7955
"Danio rerio" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0006284
"base-excision repair" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur
cluster binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR003265 InterPro:IPR003651 InterPro:IPR004036
InterPro:IPR011257 InterPro:IPR015797 Pfam:PF00730 PROSITE:PS01155
SMART:SM00478 SMART:SM00525 ZFIN:ZDB-GENE-081104-193 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0051539
GO:GO:0004519 KO:K03575 CTD:4595 eggNOG:COG1194 HOVERGEN:HBG052540
OrthoDB:EOG4HX50Q GeneTree:ENSGT00510000047220 HOGENOM:HOG000028743
OMA:HLGEVVH EMBL:CT025742 IPI:IPI00900622 RefSeq:XP_686698.2
UniGene:Dr.74965 STRING:B8JJK1 Ensembl:ENSDART00000114177
GeneID:558403 KEGG:dre:558403 NextBio:20882452 Uniprot:B8JJK1
Length = 526
Score = 94 (38.1 bits), Expect = 0.00096, P = 0.00096
Identities = 31/119 (26%), Positives = 53/119 (44%)
Query: 9 LTKYDGDIPSSLDELLL-LPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNRLGWVSQP 67
+++ DG +P + LL LPG+G A + ++ V G VD +V R+ R+ +
Sbjct: 157 VSELDGQMPKTTAGLLKQLPGVGRYTAGAIGSIALGQVTG-AVDGNVIRVLCRVRAIGAD 215
Query: 68 GRKQKTSSPEQTREVLQL---WLPKEEWVPINPLLVGFGQTICTPIRPRCGMCSVSELC 123
+SSP T + ++ + E N ++ G +CTP P C C + C
Sbjct: 216 -----SSSPAVTDALWRIADALVDPERPGDFNQAMMELGARVCTPKSPVCSQCPIQTHC 269
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.139 0.466 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 143 127 0.00091 102 3 11 22 0.38 31
29 0.40 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 70
No. of states in DFA: 605 (64 KB)
Total size of DFA: 157 KB (2093 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 12.57u 0.12s 12.69t Elapsed: 00:00:00
Total cpu time: 12.57u 0.13s 12.70t Elapsed: 00:00:00
Start: Sat May 11 01:17:26 2013 End: Sat May 11 01:17:26 2013