BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032319
(143 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225439737|ref|XP_002274178.1| PREDICTED: glycine-rich RNA-binding protein 2 [Vitis vinifera]
gi|297741476|emb|CBI32608.3| unnamed protein product [Vitis vinifera]
Length = 140
Score = 202 bits (513), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 105/143 (73%), Positives = 122/143 (85%), Gaps = 3/143 (2%)
Query: 1 MAFASSFRRALSSGSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQL 60
MAFASSFRR L+ S+IL+SQ R+NST+TSP+LFVSGLSRLTTDEKLKEAF+PFGQL
Sbjct: 1 MAFASSFRRVLTGSSTILQSQFSPARFNSTVTSPKLFVSGLSRLTTDEKLKEAFSPFGQL 60
Query: 61 VYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREARPPPP 120
+ +KVITDR +GRSKGFGFV+YT++EEAE+AREGMNAK+LDGWVIFVDPAK RE P
Sbjct: 61 LEAKVITDRVSGRSKGFGFVTYTTLEEAEKAREGMNAKFLDGWVIFVDPAKPREP---RP 117
Query: 121 PPYPEQQPSEMGFRTNKTVGWSG 143
PP E + SE GFRTNKT+GW G
Sbjct: 118 PPQQEPESSETGFRTNKTIGWCG 140
>gi|388519245|gb|AFK47684.1| unknown [Lotus japonicus]
Length = 138
Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 97/144 (67%), Positives = 108/144 (75%), Gaps = 7/144 (4%)
Query: 1 MAFASSFRRALSSGSSILKSQLGSIRYNST-LTSPRLFVSGLSRLTTDEKLKEAFAPFGQ 59
MAF S +R L S L S+R ST LT+P+LF+SGLSR TTD KL EAFAPFGQ
Sbjct: 1 MAFFSGVQRFLRQSSH----NLTSVRLCSTTLTTPKLFISGLSRQTTDRKLNEAFAPFGQ 56
Query: 60 LVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREARPPP 119
L+ +KVITDRA+GRSKGFGFVSY SIEEAE+A +GMNAK+LDGWVIFVDPAK RE P P
Sbjct: 57 LIEAKVITDRASGRSKGFGFVSYASIEEAEKAGKGMNAKFLDGWVIFVDPAKPRE--PRP 114
Query: 120 PPPYPEQQPSEMGFRTNKTVGWSG 143
P QQPSE GF NKTVGW G
Sbjct: 115 PMQSESQQPSETGFTVNKTVGWCG 138
>gi|357510439|ref|XP_003625508.1| RNA binding protein [Medicago truncatula]
gi|355500523|gb|AES81726.1| RNA binding protein [Medicago truncatula]
Length = 141
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/144 (68%), Positives = 113/144 (78%), Gaps = 4/144 (2%)
Query: 1 MAFASSFRRAL-SSGSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQ 59
MAF F R L S S ++ S SIR NSTLTSP+LF+SGLSRLTTDEKL EAF+PFGQ
Sbjct: 1 MAFFFGFHRLLRHSQSPLVSSHFTSIRLNSTLTSPKLFISGLSRLTTDEKLTEAFSPFGQ 60
Query: 60 LVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREARPPP 119
L+ +KVITDR +GRSKGF FVSY++IEEAE+AREGMNAK+LDGWVIFVDPAK RE P
Sbjct: 61 LLEAKVITDRGSGRSKGFAFVSYSTIEEAEKAREGMNAKFLDGWVIFVDPAKPRE---PR 117
Query: 120 PPPYPEQQPSEMGFRTNKTVGWSG 143
PP + QPS+ GF NKTVGW G
Sbjct: 118 PPQQSQSQPSQTGFTVNKTVGWCG 141
>gi|449448655|ref|XP_004142081.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 146
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/149 (66%), Positives = 120/149 (80%), Gaps = 9/149 (6%)
Query: 1 MAFASSFRRALS------SGSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAF 54
MAF S+ RR L+ S SSIL+SQ ++R +STLTSP+LF+SGLSRLTTDEKL+EAF
Sbjct: 1 MAFFSTVRRVLNGSSSSSSSSSILRSQWNAVRLSSTLTSPKLFISGLSRLTTDEKLREAF 60
Query: 55 APFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSRE 114
+ FGQLV +KV+TDRATGRSKGF FV+Y++I+EAE+ARE MNAK+LDGWVIFVDPAK
Sbjct: 61 SSFGQLVDAKVVTDRATGRSKGFAFVTYSTIDEAEKAREEMNAKFLDGWVIFVDPAK--- 117
Query: 115 ARPPPPPPYPEQQPSEMGFRTNKTVGWSG 143
R P PPP P+ + SE G RTNKT+GW G
Sbjct: 118 PREPRPPPQPQSETSEFGIRTNKTIGWCG 146
>gi|356505124|ref|XP_003521342.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Glycine max]
Length = 139
Score = 178 bits (452), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 98/143 (68%), Positives = 112/143 (78%), Gaps = 4/143 (2%)
Query: 1 MAFASSFRRALSSGSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQL 60
MAF +R L + ++ S SIR +STLTSP+LFVSGLSRLT DE LKEAF+ FGQL
Sbjct: 1 MAFLYGAQRLLRH-TPLVHSHYASIRLSSTLTSPKLFVSGLSRLTKDENLKEAFSSFGQL 59
Query: 61 VYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREARPPPP 120
V +KVITDRA+GRSKGF FV+YT+IEEAERAREGMNAK+LDGWVIFVDPAK RE P P
Sbjct: 60 VEAKVITDRASGRSKGFAFVTYTTIEEAERAREGMNAKFLDGWVIFVDPAKPRE---PRP 116
Query: 121 PPYPEQQPSEMGFRTNKTVGWSG 143
P + QPSE+GF NKTVGW G
Sbjct: 117 PQQSQSQPSEIGFTVNKTVGWCG 139
>gi|351724829|ref|NP_001237071.1| uncharacterized protein LOC100306326 [Glycine max]
gi|255628209|gb|ACU14449.1| unknown [Glycine max]
Length = 139
Score = 178 bits (451), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 97/143 (67%), Positives = 111/143 (77%), Gaps = 4/143 (2%)
Query: 1 MAFASSFRRALSSGSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQL 60
MAF S +R L + ++ S SIR +STLTSP+LFVSGL RLT DEKLKEAF+ FGQL
Sbjct: 1 MAFMSGVQRLLRR-TPLVHSHYASIRLSSTLTSPKLFVSGLCRLTIDEKLKEAFSSFGQL 59
Query: 61 VYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREARPPPP 120
V +KVI DRA+GRSKGF FV+YT+IEEAE+AREGMNAK+LDGWVIFVDPAK RE P P
Sbjct: 60 VEAKVIIDRASGRSKGFAFVTYTTIEEAEKAREGMNAKFLDGWVIFVDPAKPRE---PRP 116
Query: 121 PPYPEQQPSEMGFRTNKTVGWSG 143
P + QPSE GF NKTVGW G
Sbjct: 117 PQQSQSQPSETGFTVNKTVGWCG 139
>gi|255581040|ref|XP_002531336.1| RNA binding protein, putative [Ricinus communis]
gi|223529058|gb|EEF31043.1| RNA binding protein, putative [Ricinus communis]
Length = 144
Score = 171 bits (433), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 99/145 (68%), Positives = 117/145 (80%), Gaps = 3/145 (2%)
Query: 1 MAFASSFRRALSSGSSILKSQLGSI--RYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFG 58
MAF+S RR L SS L + R++STLT PRLFVSGLSRLTTDEKLKEAF+PFG
Sbjct: 1 MAFSSIIRRGLFGSSSSLPASPALFLTRFHSTLTCPRLFVSGLSRLTTDEKLKEAFSPFG 60
Query: 59 QLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREARPP 118
QLV +KVI DRA+GRSKGFGF++Y +IEEAE+AREGMNAK+LDGWVIFVDPAK RE R P
Sbjct: 61 QLVDAKVIIDRASGRSKGFGFITYATIEEAEKAREGMNAKFLDGWVIFVDPAKPREQRLP 120
Query: 119 PPPPYPEQQPSEMGFRTNKTVGWSG 143
PPPP P+ + SE G++ N+T+GW G
Sbjct: 121 PPPP-PQPETSETGYKINRTIGWCG 144
>gi|357112848|ref|XP_003558218.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 168
Score = 168 bits (425), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 80/113 (70%), Positives = 92/113 (81%), Gaps = 3/113 (2%)
Query: 31 LTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAER 90
LT+P+LFVSGLSRLTTDEKLK AF PFGQ++ +KVITDR +GRSKGFGFV Y S++EAE
Sbjct: 59 LTTPKLFVSGLSRLTTDEKLKNAFIPFGQVLEAKVITDRISGRSKGFGFVRYVSLQEAEA 118
Query: 91 AREGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGFRTNKTVGWSG 143
AR+GMNAK+LDGWVIFVDPAK RE + P P P+ S GF TNKTVGW G
Sbjct: 119 ARQGMNAKFLDGWVIFVDPAKPREQK---PAPQPDSASSHTGFTTNKTVGWCG 168
>gi|125543335|gb|EAY89474.1| hypothetical protein OsI_11005 [Oryza sativa Indica Group]
Length = 173
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 79/113 (69%), Positives = 92/113 (81%), Gaps = 3/113 (2%)
Query: 31 LTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAER 90
LT+P+LF+SGLSRLTTDEKLK AFAPFGQL+ +KVITDR +GRSKGFGFV Y ++EEAE
Sbjct: 64 LTAPKLFISGLSRLTTDEKLKNAFAPFGQLLEAKVITDRISGRSKGFGFVRYATLEEAEN 123
Query: 91 AREGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGFRTNKTVGWSG 143
AR+ MNAK+LDGWVIFVDPAK R+ + P P P+ S GF TNKTVGW G
Sbjct: 124 ARQEMNAKFLDGWVIFVDPAKPRQQK---PAPRPDTDSSHTGFTTNKTVGWCG 173
>gi|115452257|ref|NP_001049729.1| Os03g0278800 [Oryza sativa Japonica Group]
gi|108707493|gb|ABF95288.1| RNA-binding protein, putative, expressed [Oryza sativa Japonica
Group]
gi|113548200|dbj|BAF11643.1| Os03g0278800 [Oryza sativa Japonica Group]
gi|125543333|gb|EAY89472.1| hypothetical protein OsI_11004 [Oryza sativa Indica Group]
gi|125585797|gb|EAZ26461.1| hypothetical protein OsJ_10350 [Oryza sativa Japonica Group]
Length = 173
Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/113 (69%), Positives = 92/113 (81%), Gaps = 3/113 (2%)
Query: 31 LTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAER 90
LT+P+LF+SGLSRLTTDEKLK AFAPFGQL+ +KVITDR +GRSKGFGFV Y ++EEAE
Sbjct: 64 LTAPKLFISGLSRLTTDEKLKNAFAPFGQLLEAKVITDRISGRSKGFGFVRYATLEEAEN 123
Query: 91 AREGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGFRTNKTVGWSG 143
AR+ MNAK+LDGWVIFVDPAK R+ + P P P+ S GF TNKTVGW G
Sbjct: 124 ARQEMNAKFLDGWVIFVDPAKPRQQK---PAPRPDTDSSHTGFTTNKTVGWCG 173
>gi|297827259|ref|XP_002881512.1| hypothetical protein ARALYDRAFT_902894 [Arabidopsis lyrata subsp.
lyrata]
gi|297327351|gb|EFH57771.1| hypothetical protein ARALYDRAFT_902894 [Arabidopsis lyrata subsp.
lyrata]
Length = 142
Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 91/147 (61%), Positives = 110/147 (74%), Gaps = 11/147 (7%)
Query: 1 MAFASSFRRALSSGSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQL 60
MAF SSFRR ++ +S+L S +R STLTSPRLFVSGLSRLTT+EKL++AFA FGQL
Sbjct: 1 MAFVSSFRRLVAGSNSLLSSPSFCVRRCSTLTSPRLFVSGLSRLTTNEKLQDAFASFGQL 60
Query: 61 VYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREA----- 115
V ++VITDR TGRSKGFGFV+Y +IE+AE+A+ MNAK+LDGWVIFVDPA+ RE
Sbjct: 61 VDARVITDRETGRSKGFGFVTYATIEDAEKAKAEMNAKFLDGWVIFVDPARPREPRRPLQ 120
Query: 116 RPPPPPPYPEQQPSEMGFRTNKTVGWS 142
R PP + S GF TNKT+GW
Sbjct: 121 REPP------RSSSGSGFTTNKTIGWC 141
>gi|226529880|ref|NP_001150360.1| RNA binding protein [Zea mays]
gi|195638638|gb|ACG38787.1| RNA binding protein [Zea mays]
gi|414866145|tpg|DAA44702.1| TPA: RNA binding protein [Zea mays]
Length = 166
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/113 (69%), Positives = 91/113 (80%), Gaps = 3/113 (2%)
Query: 31 LTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAER 90
LT+P LFVSGLSRLTTDEKL+ AFAPFG+L+ +KV+TDR +GRSKGFGFV Y +IEEAER
Sbjct: 57 LTTPNLFVSGLSRLTTDEKLQGAFAPFGRLLEAKVVTDRVSGRSKGFGFVRYATIEEAER 116
Query: 91 AREGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGFRTNKTVGWSG 143
AR+ MNAK+LDGWVIFVDPAK R+ P P P + S GF TNKTVGW G
Sbjct: 117 ARQEMNAKFLDGWVIFVDPAKPRQ---PKPAPQQDTGSSHAGFTTNKTVGWCG 166
>gi|15224298|ref|NP_181287.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|20197470|gb|AAM15089.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|21536972|gb|AAM61313.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|114050677|gb|ABI49488.1| At2g37510 [Arabidopsis thaliana]
gi|330254316|gb|AEC09410.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 142
Score = 161 bits (408), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 92/142 (64%), Positives = 111/142 (78%), Gaps = 1/142 (0%)
Query: 1 MAFASSFRRALSSGSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQL 60
MAF SSFRR ++ SS+L S +R STLTSPRLFVSGLSRLTT+EKL++AFA FGQL
Sbjct: 1 MAFVSSFRRLVAGSSSLLSSPSLCVRRCSTLTSPRLFVSGLSRLTTNEKLQDAFASFGQL 60
Query: 61 VYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREARPPPP 120
V ++VITDR +GRSKGFGFV+Y +IE+AE+A+ MNAK+LDGWVIFVDPA+ RE R P
Sbjct: 61 VDARVITDRDSGRSKGFGFVTYATIEDAEKAKAEMNAKFLDGWVIFVDPARPREPRRPLQ 120
Query: 121 PPYPEQQPSEMGFRTNKTVGWS 142
P + SE GF TNKT+GW
Sbjct: 121 QE-PLRPSSESGFTTNKTIGWC 141
>gi|242036137|ref|XP_002465463.1| hypothetical protein SORBIDRAFT_01g039290 [Sorghum bicolor]
gi|241919317|gb|EER92461.1| hypothetical protein SORBIDRAFT_01g039290 [Sorghum bicolor]
Length = 169
Score = 161 bits (407), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 77/113 (68%), Positives = 93/113 (82%), Gaps = 3/113 (2%)
Query: 31 LTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAER 90
LT+P+LFVSGLSRLTTDEKL+ AFAPFG+++ +KV+TDR +GRSKGFGFV Y +IEEAE+
Sbjct: 60 LTTPKLFVSGLSRLTTDEKLQGAFAPFGRILEAKVVTDRVSGRSKGFGFVRYATIEEAEK 119
Query: 91 AREGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGFRTNKTVGWSG 143
AR+ MNAK+LDGWVIFVDPAK R+ P P P + S +GF TNKTVGW G
Sbjct: 120 ARQEMNAKFLDGWVIFVDPAKPRQ---PKPAPEQDTSSSHVGFTTNKTVGWCG 169
>gi|449516497|ref|XP_004165283.1| PREDICTED: glycine-rich RNA-binding protein 2-like, partial
[Cucumis sativus]
Length = 100
Score = 141 bits (355), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 73/103 (70%), Positives = 86/103 (83%), Gaps = 3/103 (2%)
Query: 41 LSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYL 100
LSRLTTDEKL+EAF+ FGQL +KV+TDRATGRSKGF FV+Y++I+EAE+ARE MNAK+L
Sbjct: 1 LSRLTTDEKLREAFSSFGQLADAKVVTDRATGRSKGFAFVTYSTIDEAEKAREEMNAKFL 60
Query: 101 DGWVIFVDPAKSREARPPPPPPYPEQQPSEMGFRTNKTVGWSG 143
DGWVIFVDPAK R P PPP P+ + SE G RTNKT+GW G
Sbjct: 61 DGWVIFVDPAKP---REPRPPPQPQSETSEFGIRTNKTIGWCG 100
>gi|224286824|gb|ACN41115.1| unknown [Picea sitchensis]
Length = 149
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/157 (47%), Positives = 97/157 (61%), Gaps = 22/157 (14%)
Query: 1 MAFASSFRRAL---SSGSSILKSQ-----------LGSIRYNSTLTSPRLFVSGLSRLTT 46
MA S RR L S+G +L LG++R +T +LF+SGLSR TT
Sbjct: 1 MALLSGIRRVLGGTSTGRLLLAKDPFCAVRSSPIGLGAVRDFTT----KLFISGLSRQTT 56
Query: 47 DEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIF 106
DE L+ F+ FGQLV ++V+TDR +GRS+GFGFV Y ++E+A + +EGM+ K+LDGWVIF
Sbjct: 57 DEGLRAKFSEFGQLVEARVVTDRISGRSRGFGFVRYATLEDAAKGKEGMDGKFLDGWVIF 116
Query: 107 VDPAKSREARPPPPPPYPEQQPSEMGFRTNKTVGWSG 143
D AK RE +PPPPP P G KT+GW G
Sbjct: 117 ADFAKPREPKPPPPPEEPNPH----GLNIQKTIGWCG 149
>gi|356543191|ref|XP_003540046.1| PREDICTED: nucleolin-like [Glycine max]
Length = 145
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 68/89 (76%), Gaps = 5/89 (5%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
+P LFVSGLS+ TT E+L+E FA FG++V+++V+TDR +G SKGFGFV Y +IEEA +
Sbjct: 48 NPNLFVSGLSKRTTTERLREEFAKFGEVVHARVVTDRVSGYSKGFGFVQYATIEEAAKGI 107
Query: 93 EGMNAKYLDGWVIFVDPAKSREARPPPPP 121
EGM+ K+LDGWVIF + ARP PPP
Sbjct: 108 EGMDGKFLDGWVIFAE-----YARPRPPP 131
>gi|115474735|ref|NP_001060964.1| Os08g0139000 [Oryza sativa Japonica Group]
gi|38636774|dbj|BAD03017.1| putative RNA recognition motif (RRM)-containing protein [Oryza
sativa Japonica Group]
gi|113622933|dbj|BAF22878.1| Os08g0139000 [Oryza sativa Japonica Group]
gi|215767574|dbj|BAG99802.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222639884|gb|EEE68016.1| hypothetical protein OsJ_25986 [Oryza sativa Japonica Group]
Length = 141
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 71/98 (72%), Gaps = 3/98 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
SP LF+SGLS+ TT + LKEAFA FG++++++V+TDR TG SKGFGFV Y ++E+A +
Sbjct: 35 SPNLFISGLSKRTTTDGLKEAFAKFGEVIHARVVTDRVTGFSKGFGFVRYATVEDAAKGI 94
Query: 93 EGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSE 130
EGM+ K+LDGWVIF + A+ R PP P QP +
Sbjct: 95 EGMDGKFLDGWVIFAEYARPRT---PPQQPEMNSQPQQ 129
>gi|357144628|ref|XP_003573359.1| PREDICTED: nucleolin-like [Brachypodium distachyon]
Length = 153
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/100 (55%), Positives = 72/100 (72%), Gaps = 7/100 (7%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
SP LFVSGLS+ TT + L+EAFA FG++++++V+TDR TG SKGFGFV Y S+E+A +
Sbjct: 47 SPNLFVSGLSKRTTTDGLREAFAKFGEVMHARVVTDRVTGFSKGFGFVRYASVEDASKGI 106
Query: 93 EGMNAKYLDGWVIFVDPAKSREARPPPPPPYPE--QQPSE 130
EGM+ K+LDGWVIF + ARP PPP E QP +
Sbjct: 107 EGMDGKFLDGWVIFAE-----YARPRPPPQMGEGTSQPQQ 141
>gi|218200448|gb|EEC82875.1| hypothetical protein OsI_27755 [Oryza sativa Indica Group]
Length = 141
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 72/100 (72%), Gaps = 7/100 (7%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
SP LF+SGLS+ TT + LKEAFA FG++++++V+TDR TG SKGFGF+ Y ++E+A +
Sbjct: 35 SPNLFISGLSKRTTTDGLKEAFAKFGEVIHARVVTDRVTGFSKGFGFIRYATVEDAAKGI 94
Query: 93 EGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQ--QPSE 130
EGM+ K+LDGWVIF + ARP PP PE QP +
Sbjct: 95 EGMDGKFLDGWVIFAE-----YARPRTPPQQPEMNSQPQQ 129
>gi|226500552|ref|NP_001148723.1| ELAV-like protein 4 [Zea mays]
gi|195621654|gb|ACG32657.1| ELAV-like protein 4 [Zea mays]
Length = 127
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 66/89 (74%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
LFVSGL++ TT E LKEAF+ FGQ++ ++VITDR +G S+GFGFV Y +++EA A EGM
Sbjct: 36 LFVSGLNKRTTSEGLKEAFSKFGQVIEARVITDRISGYSRGFGFVKYATVQEAGEAIEGM 95
Query: 96 NAKYLDGWVIFVDPAKSREARPPPPPPYP 124
+ K+LDGWVIF + AK REA P P
Sbjct: 96 DGKFLDGWVIFAEYAKQREATQPSQQGAP 124
>gi|388511713|gb|AFK43918.1| unknown [Lotus japonicus]
Length = 141
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 70/98 (71%), Gaps = 8/98 (8%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFVSGL++ TT EKL+E FA FG++V+++V+TDR +G SKGFGFV Y +IEEA +
Sbjct: 43 STNLFVSGLNKRTTTEKLREEFAKFGEVVHARVVTDRVSGYSKGFGFVKYATIEEASKGI 102
Query: 93 EGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSE 130
+GM+ K+LDGWVIF + AKS P P QQP+
Sbjct: 103 QGMDGKFLDGWVIFAEYAKSS--------PAPGQQPAN 132
>gi|255580168|ref|XP_002530915.1| RNA binding protein, putative [Ricinus communis]
gi|223529509|gb|EEF31464.1| RNA binding protein, putative [Ricinus communis]
Length = 354
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 66/88 (75%), Gaps = 5/88 (5%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
LFVSGLS+ TT E LK+AF+ FG++V ++V+TDR +G SKGFGFV Y S+E+AE+ EG
Sbjct: 53 NLFVSGLSKRTTTEGLKQAFSKFGEVVQARVVTDRVSGYSKGFGFVRYGSLEDAEKGIEG 112
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPPP 122
M+ K+LDGWVIF + ARP PP P
Sbjct: 113 MDGKFLDGWVIFAE-----YARPRPPLP 135
>gi|115472673|ref|NP_001059935.1| Os07g0549800 [Oryza sativa Japonica Group]
gi|28564803|dbj|BAC57733.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|113611471|dbj|BAF21849.1| Os07g0549800 [Oryza sativa Japonica Group]
gi|125600644|gb|EAZ40220.1| hypothetical protein OsJ_24665 [Oryza sativa Japonica Group]
gi|215767980|dbj|BAH00209.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 133
Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 66/87 (75%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
LFVSGL++ TT + L+EAF+ FGQ++ ++VITDR +G S+GFGFV Y ++EEA +GM
Sbjct: 37 LFVSGLNKRTTSDGLREAFSKFGQVIEARVITDRISGYSRGFGFVKYATVEEAGEGIKGM 96
Query: 96 NAKYLDGWVIFVDPAKSREARPPPPPP 122
+ K+LDGWVIF + AK REA+ P P
Sbjct: 97 DGKFLDGWVIFAEYAKQREAQQPAQPA 123
>gi|125558733|gb|EAZ04269.1| hypothetical protein OsI_26412 [Oryza sativa Indica Group]
Length = 133
Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 66/87 (75%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
LFVSGL++ TT + L+EAF+ FGQ++ ++VITDR +G S+GFGFV Y ++EEA +GM
Sbjct: 37 LFVSGLNKRTTSDGLREAFSKFGQVIEARVITDRISGYSRGFGFVKYATVEEAGEGIKGM 96
Query: 96 NAKYLDGWVIFVDPAKSREARPPPPPP 122
+ K+LDGWVIF + AK REA+ P P
Sbjct: 97 DGKFLDGWVIFAEYAKQREAQQPAQPA 123
>gi|116792076|gb|ABK26221.1| unknown [Picea sitchensis]
Length = 151
Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 58/111 (52%), Positives = 75/111 (67%), Gaps = 8/111 (7%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
SP+LFVSGLS+ TTDE L+EAF+ FG+++ ++V+TD+ G SKGF FV Y + EEA++ +
Sbjct: 46 SPKLFVSGLSKRTTDEGLREAFSKFGRVLEARVVTDKMNGVSKGFAFVRYATQEEADKGK 105
Query: 93 EGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGFRTNKTVGWSG 143
EGM+ K+LDGWVIF D ARP PP Y P E G TN T G
Sbjct: 106 EGMDGKFLDGWVIFAD-----YARPRPPRTY--DNP-EGGNTTNATFAEGG 148
>gi|449468518|ref|XP_004151968.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
gi|449496932|ref|XP_004160266.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
Length = 174
Score = 108 bits (269), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 66/89 (74%), Gaps = 5/89 (5%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFVSGLS+ TT EKL EAFA FG++ +++V+TDR TG SKGFGFV Y ++E+A +
Sbjct: 78 STNLFVSGLSKRTTTEKLHEAFAKFGEVAHARVVTDRVTGYSKGFGFVKYATLEDAAKGI 137
Query: 93 EGMNAKYLDGWVIFVDPAKSREARPPPPP 121
EGM+ K+LDGWVIF + ARP PPP
Sbjct: 138 EGMDGKFLDGWVIFAE-----YARPRPPP 161
>gi|326514928|dbj|BAJ99825.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326517426|dbj|BAK00080.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 153
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/100 (54%), Positives = 71/100 (71%), Gaps = 11/100 (11%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
SP LFVSGLS+ TT + L+EAFA FG++ +++VITDR TG SKGFGFV Y ++E+A +
Sbjct: 47 SPNLFVSGLSKRTTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGI 106
Query: 93 EGMNAKYLDGWVIFVDPAKSREARPPPPP------PYPEQ 126
EGM+ ++LDGWVIF + ARP PPP P P+Q
Sbjct: 107 EGMDGEFLDGWVIFAE-----YARPRPPPQMGGATPQPQQ 141
>gi|242045928|ref|XP_002460835.1| hypothetical protein SORBIDRAFT_02g035890 [Sorghum bicolor]
gi|241924212|gb|EER97356.1| hypothetical protein SORBIDRAFT_02g035890 [Sorghum bicolor]
Length = 131
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/94 (53%), Positives = 67/94 (71%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
LFVSGL++ TT LKEAF+ FGQ++ ++VITDR +G S+GFGFV Y +++EA A +GM
Sbjct: 38 LFVSGLNKRTTSNGLKEAFSKFGQVIEARVITDRISGYSRGFGFVKYATVQEAGEAIKGM 97
Query: 96 NAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPS 129
+ K+LDGWVIF + AK REA P P + S
Sbjct: 98 DGKFLDGWVIFAEYAKQREATQPSQQGAPYEYSS 131
>gi|226496497|ref|NP_001150207.1| LOC100283837 [Zea mays]
gi|195621336|gb|ACG32498.1| nucleolin [Zea mays]
gi|195637560|gb|ACG38248.1| nucleolin [Zea mays]
gi|223948323|gb|ACN28245.1| unknown [Zea mays]
gi|413917478|gb|AFW57410.1| nucleolin [Zea mays]
Length = 140
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 69/98 (70%), Gaps = 3/98 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
SP LFVSGLS+ TT E L+EAFA FG++++++V+TDR +G SKGFGFV Y + EEA +
Sbjct: 34 SPNLFVSGLSKRTTSEGLREAFAEFGEVLHARVVTDRVSGFSKGFGFVRYATTEEAAKGI 93
Query: 93 EGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSE 130
EG + K+LDGWVIF + AK RPPP QP +
Sbjct: 94 EGKDGKFLDGWVIFAEYAKP---RPPPEETGMNSQPQQ 128
>gi|357122488|ref|XP_003562947.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like
[Brachypodium distachyon]
Length = 138
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 65/84 (77%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
LFVSGL++ TT + L+EAF+ FGQ+ ++VITDR +G S+GFGFV Y ++EEA +GM
Sbjct: 42 LFVSGLNKRTTTDGLREAFSKFGQVTEARVITDRISGYSRGFGFVKYATVEEAGEGIKGM 101
Query: 96 NAKYLDGWVIFVDPAKSREARPPP 119
+ K+LDGWVIF + AK REA+ PP
Sbjct: 102 DGKFLDGWVIFAEYAKQREAQQPP 125
>gi|242080503|ref|XP_002445020.1| hypothetical protein SORBIDRAFT_07g002960 [Sorghum bicolor]
gi|241941370|gb|EES14515.1| hypothetical protein SORBIDRAFT_07g002960 [Sorghum bicolor]
Length = 140
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 67/95 (70%), Gaps = 5/95 (5%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
SP LFVSGLS+ TT E L++AFA FG++V+++V+TDR +G SKGFGFV Y + EEA +
Sbjct: 34 SPNLFVSGLSKRTTTEGLRDAFAKFGEVVHARVVTDRVSGFSKGFGFVRYATTEEATKGI 93
Query: 93 EGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQ 127
EGM+ K+LDGWVIF + ARP PP E
Sbjct: 94 EGMDGKFLDGWVIFAE-----YARPRAPPEQAEMN 123
>gi|356517261|ref|XP_003527307.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Glycine max]
Length = 145
Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 66/89 (74%), Gaps = 5/89 (5%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
LFVSGLS+ T E+L+E FA FG++V+++V+TDR +G SKGFGFV Y +IE+A + EGM
Sbjct: 51 LFVSGLSKRTNTERLREEFAKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGM 110
Query: 96 NAKYLDGWVIFVDPAKSREARPPPPPPYP 124
+ K+LDGWVIF + ARP PPP P
Sbjct: 111 DGKFLDGWVIFAE-----YARPRPPPGQP 134
>gi|326527061|dbj|BAK04472.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 139
Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 64/84 (76%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
LFVSGL++ TT + L+EAF+ FGQ+ ++VITDR +G S+GFGFV Y ++EEA +GM
Sbjct: 42 LFVSGLNKRTTSDGLREAFSKFGQVTDARVITDRISGYSRGFGFVKYATVEEAAEGIKGM 101
Query: 96 NAKYLDGWVIFVDPAKSREARPPP 119
+ K+ DGWVIF + AK REA+ PP
Sbjct: 102 DGKFFDGWVIFAEYAKQREAQQPP 125
>gi|388512901|gb|AFK44512.1| unknown [Medicago truncatula]
Length = 144
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 66/89 (74%), Gaps = 5/89 (5%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFVSGLS+ TT E L+EAF FG++V+++V+TDR +G SKGFGFV Y ++E+A +
Sbjct: 50 STNLFVSGLSKRTTTETLREAFQKFGEVVHARVVTDRVSGYSKGFGFVKYATLEDAAKGI 109
Query: 93 EGMNAKYLDGWVIFVDPAKSREARPPPPP 121
EGM+ K+L+GWVIF + ARP PPP
Sbjct: 110 EGMDGKFLEGWVIFAE-----YARPRPPP 133
>gi|225461185|ref|XP_002283144.1| PREDICTED: glycine-rich RNA-binding protein 2 [Vitis vinifera]
gi|147854770|emb|CAN78606.1| hypothetical protein VITISV_024164 [Vitis vinifera]
gi|302143178|emb|CBI20473.3| unnamed protein product [Vitis vinifera]
Length = 135
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 65/89 (73%), Gaps = 3/89 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFVSGLS+ TT E L EAF+ FGQ+V ++V+TDR +G SKGFGFV Y S+E+A
Sbjct: 40 STNLFVSGLSKRTTSEGLHEAFSKFGQVVNARVVTDRVSGYSKGFGFVRYVSLEDAAEGI 99
Query: 93 EGMNAKYLDGWVIFVDPAKSREARPPPPP 121
+GM+ K+LDGWVIF + A+ RPPP P
Sbjct: 100 KGMDGKFLDGWVIFAEYAR---PRPPPSP 125
>gi|225440312|ref|XP_002263021.1| PREDICTED: glycine-rich RNA-binding protein blt801 [Vitis vinifera]
gi|297740398|emb|CBI30580.3| unnamed protein product [Vitis vinifera]
Length = 133
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 68/91 (74%), Gaps = 5/91 (5%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LF+SGL++ TT EKL E + FG++V+++V+TDR++G SKGFGFV Y +I +AE+
Sbjct: 34 STTLFISGLNKRTTSEKLNEEASKFGEVVHARVVTDRSSGYSKGFGFVKYATIAQAEQGI 93
Query: 93 EGMNAKYLDGWVIFVDPAKSREARPPPPPPY 123
+G++A++LDGWVIF + A+SR PP Y
Sbjct: 94 KGLDAQFLDGWVIFAEFARSR-----TPPGY 119
>gi|224124176|ref|XP_002319264.1| predicted protein [Populus trichocarpa]
gi|118487492|gb|ABK95573.1| unknown [Populus trichocarpa]
gi|222857640|gb|EEE95187.1| predicted protein [Populus trichocarpa]
Length = 149
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 65/90 (72%), Gaps = 5/90 (5%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
LFVSGLS+ TT E L+EAF+ FG++V +KV+TDR +G SKGFGFV Y ++E+A +GM
Sbjct: 56 LFVSGLSKRTTTEGLQEAFSKFGEVVQAKVVTDRTSGYSKGFGFVRYGTLEDAAEGIKGM 115
Query: 96 NAKYLDGWVIFVDPAKSREARPPPPPPYPE 125
+ ++LDGWVIF + ARP PP P+
Sbjct: 116 DGQFLDGWVIFAE-----YARPKQPPSQPQ 140
>gi|224115158|ref|XP_002316957.1| predicted protein [Populus trichocarpa]
gi|222860022|gb|EEE97569.1| predicted protein [Populus trichocarpa]
Length = 153
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 68/98 (69%), Gaps = 6/98 (6%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
LFVSGLS+ TT E L+EAF+ FG++V ++V+TDR +G SKGFGFV Y ++E+A +GM
Sbjct: 57 LFVSGLSKRTTSEGLQEAFSKFGEVVQARVVTDRVSGYSKGFGFVKYATLEDAAEGIKGM 116
Query: 96 NAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
+ ++LDGWVIF + ARP PP P Q + MG
Sbjct: 117 DGQFLDGWVIFAE-----YARPRQPPSEP-QNNTGMGL 148
>gi|297792921|ref|XP_002864345.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297310180|gb|EFH40604.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 156
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 67/102 (65%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFVSGLS+ TT E L+ AFA FG++ +KV+TDR +G SKGFGFV Y ++E++ +
Sbjct: 55 STNLFVSGLSKRTTSEGLRTAFAQFGEVADAKVVTDRVSGYSKGFGFVRYATLEDSAKGI 114
Query: 93 EGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGFR 134
GM+ K+LDGWVIF + A+ RE P P +P G R
Sbjct: 115 AGMDGKFLDGWVIFAEYARPREQSQPYQPQNNMSRPPYYGNR 156
>gi|346469013|gb|AEO34351.1| hypothetical protein [Amblyomma maculatum]
Length = 139
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 60/76 (78%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
+ LFVSGLS+ TT E L+EAFA FG++V+++V+TDR +G SKGFGFV Y ++E+A
Sbjct: 35 NTNLFVSGLSKRTTTEGLREAFAKFGEVVHARVVTDRVSGYSKGFGFVKYATLEDAAEGI 94
Query: 93 EGMNAKYLDGWVIFVD 108
+GM+ K+LDGWVIF +
Sbjct: 95 KGMDGKFLDGWVIFAE 110
>gi|15239676|ref|NP_200269.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|9758950|dbj|BAB09337.1| unnamed protein product [Arabidopsis thaliana]
gi|18175762|gb|AAL59923.1| unknown protein [Arabidopsis thaliana]
gi|20465513|gb|AAM20239.1| unknown protein [Arabidopsis thaliana]
gi|21553374|gb|AAM62467.1| unknown [Arabidopsis thaliana]
gi|332009129|gb|AED96512.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 156
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 61/82 (74%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFVSGLS+ TT E L+ AFA FG++ +KV+TDR +G SKGFGFV Y ++E++ +
Sbjct: 55 STNLFVSGLSKRTTSEGLRTAFAQFGEVADAKVVTDRVSGYSKGFGFVRYATLEDSAKGI 114
Query: 93 EGMNAKYLDGWVIFVDPAKSRE 114
GM+ K+LDGWVIF + A+ RE
Sbjct: 115 AGMDGKFLDGWVIFAEYARPRE 136
>gi|357167535|ref|XP_003581210.1| PREDICTED: 40S ribosomal protein S19, mitochondrial-like
[Brachypodium distachyon]
Length = 137
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 67/100 (67%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
+ +LF+ GLS+ T++ L EAFA +GQ++ + ++TD+ T RSKGFGFV + S EEA +AR
Sbjct: 35 THKLFIGGLSQFATEDTLAEAFARYGQVLEATIVTDKMTNRSKGFGFVKFASEEEANKAR 94
Query: 93 EGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMG 132
+ MN K L+G VI+VD AK+++ R P P +G
Sbjct: 95 DEMNGKVLNGRVIYVDIAKAKQDRATDVLPIASGPPKPIG 134
>gi|226509825|ref|NP_001150518.1| ELAV-like protein 4 [Zea mays]
gi|195639828|gb|ACG39382.1| ELAV-like protein 4 [Zea mays]
gi|414590519|tpg|DAA41090.1| TPA: ELAV-like protein 4 [Zea mays]
Length = 129
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 61/95 (64%), Gaps = 8/95 (8%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
LFVSGL++ TT E LKEAF+ FGQ++ ++VITDR +G S+GFGFV Y +++EA A
Sbjct: 33 CNNLFVSGLNKRTTSEGLKEAFSKFGQVIEARVITDRISGYSRGFGFVKYATVQEAGEAI 92
Query: 93 EGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQ 127
+GM+ K+LD WVIF A P E Q
Sbjct: 93 KGMDGKFLDSWVIF--------AETPHNHHNKEHQ 119
>gi|224091949|ref|XP_002309412.1| predicted protein [Populus trichocarpa]
gi|222855388|gb|EEE92935.1| predicted protein [Populus trichocarpa]
Length = 139
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 66/101 (65%), Gaps = 8/101 (7%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
+ +LFV GLS TT+ L EAF+ +GQ+V +K++ DRA RSKGFGFV+Y S +EA++A
Sbjct: 38 TTKLFVGGLSIYTTENGLSEAFSQYGQVVEAKIVMDRALDRSKGFGFVTYASEDEAQKAL 97
Query: 93 EGMNAKYLDGWVIFVDPAKSRE--------ARPPPPPPYPE 125
+ MN K L+G VI+VD AK + AR PP P E
Sbjct: 98 DEMNGKALNGRVIYVDYAKLKTNFGGGIPIARGPPEPTTSE 138
>gi|297842099|ref|XP_002888931.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297334772|gb|EFH65190.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 181
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 32 TSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERA 91
T +L+VSGLS TT++ L++ F FG+L++ ++ D+ R +GF F+ Y + EEA +A
Sbjct: 75 TKTKLYVSGLSFRTTEDTLRDTFEQFGKLIHMNLVMDKVANRPRGFAFLRYETEEEAMKA 134
Query: 92 REGMNAKYLDGWVIFVDPAKSRE--ARPPPPPPYPEQQPSEMGFRT 135
+GM+ K+LDG VIFV+ AK+R +R P P +P+ Q FRT
Sbjct: 135 IQGMHGKFLDGRVIFVEEAKTRSDISRAKPRPDFPKPQSKPRTFRT 180
>gi|38344030|emb|CAE01512.2| OJ991214_12.1 [Oryza sativa Japonica Group]
gi|38346331|emb|CAE02067.2| OJ000126_13.13 [Oryza sativa Japonica Group]
gi|116309334|emb|CAH66418.1| H0622F05.1 [Oryza sativa Indica Group]
gi|116309399|emb|CAH66476.1| OSIGBa0137L20.5 [Oryza sativa Indica Group]
Length = 137
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 63/97 (64%), Gaps = 10/97 (10%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
RLF+ GLS+ T++ L EAF+ +GQ++ + ++TD+ T R KGFGFV + S E A +A+E
Sbjct: 38 RLFIGGLSQFATEDSLAEAFSQYGQVLEATIVTDKMTNRPKGFGFVKFASEEAANKAKEE 97
Query: 95 MNAKYLDGWVIFVDPAKSREAR----------PPPPP 121
MN K L+G VI+VD AK++ R PP PP
Sbjct: 98 MNGKVLNGRVIYVDIAKAKMNRTTDSSPRATGPPKPP 134
>gi|351725383|ref|NP_001238370.1| uncharacterized protein LOC100527079 [Glycine max]
gi|255631508|gb|ACU16121.1| unknown [Glycine max]
Length = 130
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 62/95 (65%), Gaps = 8/95 (8%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS TT+ L EAF+ +GQ++ +K++TDR + RSKGFGFV++ S +EAE A E
Sbjct: 30 KLFVGGLSFYTTENALSEAFSNYGQVIEAKIVTDRVSDRSKGFGFVTFASQDEAENAIED 89
Query: 95 MNAKYLDGWVIFVDPAKSR--------EARPPPPP 121
M K L+G VIFVD AK AR PP P
Sbjct: 90 MKGKTLNGRVIFVDYAKPNINTRGEIPIARGPPEP 124
>gi|255563618|ref|XP_002522811.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223538049|gb|EEF39662.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 134
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 66/106 (62%), Gaps = 3/106 (2%)
Query: 18 LKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGF 77
+ S L SIR ++S +LF+ GLS T D+ LK+AF+ FG +V ++VITDR TGRS+GF
Sbjct: 23 VSSMLNSIR---CMSSSKLFIGGLSYGTNDDSLKDAFSGFGDVVTARVITDRDTGRSRGF 79
Query: 78 GFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREARPPPPPPY 123
GFV ++S++ A A M+ + L G I V A R RP P +
Sbjct: 80 GFVDFSSVDSASSALSAMDGQELHGRNIRVSYATERAPRPGGPRSF 125
>gi|326490373|dbj|BAJ84850.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 299
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 79/121 (65%), Gaps = 11/121 (9%)
Query: 1 MAF----ASSFRRALSSGSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAP 56
MAF ++ +R+ SGS++L++ +R +++S ++FV G+S T D+ L +AF+
Sbjct: 1 MAFLQKVGNALKRSAGSGSAMLQA----VR---SMSSSKVFVGGISYGTDDQSLGDAFSN 53
Query: 57 FGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREAR 116
+GQ+ +KVI DR +GRS+GFGFV++TS EEA A GM+ K L G ++ V A R +R
Sbjct: 54 YGQVTEAKVIMDRESGRSRGFGFVTFTSSEEAGAAITGMDGKDLQGRIVRVSYAHDRGSR 113
Query: 117 P 117
P
Sbjct: 114 P 114
>gi|297844820|ref|XP_002890291.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297336133|gb|EFH66550.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 158
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 67/104 (64%), Gaps = 7/104 (6%)
Query: 9 RALSSGSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITD 68
RAL + +++L+ L +LT +LFV GLS T E LKEAF FG++V + V+ D
Sbjct: 18 RALQASNAMLQGNL-------SLTPSKLFVGGLSPATDVELLKEAFGSFGKIVDAVVVLD 70
Query: 69 RATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKS 112
R +G S+GFGFV+Y SIE+A A + M+ K LDG +I V PA S
Sbjct: 71 RESGLSRGFGFVTYDSIEDANNAMQCMHNKELDGRIIGVSPADS 114
>gi|351725889|ref|NP_001237108.1| uncharacterized protein LOC100305561 [Glycine max]
gi|255625921|gb|ACU13305.1| unknown [Glycine max]
Length = 180
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 58/84 (69%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+VSGLS TT+E L+ AF FGQLV K++ DR R +GF F+ Y + EE+++A EG
Sbjct: 89 KLYVSGLSFRTTEESLRNAFKNFGQLVEVKLVMDRIANRPRGFAFLRYATEEESQKAIEG 148
Query: 95 MNAKYLDGWVIFVDPAKSREARPP 118
M+ K+LDG VIFV+ AK R P
Sbjct: 149 MHGKFLDGRVIFVEVAKPRSELAP 172
>gi|297806641|ref|XP_002871204.1| hypothetical protein ARALYDRAFT_487428 [Arabidopsis lyrata subsp.
lyrata]
gi|297317041|gb|EFH47463.1| hypothetical protein ARALYDRAFT_487428 [Arabidopsis lyrata subsp.
lyrata]
Length = 144
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 65/99 (65%), Gaps = 9/99 (9%)
Query: 32 TSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERA 91
+ +LFV GLS TT++ L EAF+ GQ+V ++++ DR + RSKGFGFV++ S++EA++A
Sbjct: 32 VASKLFVGGLSFCTTEQGLSEAFSKCGQVVEAQIVMDRVSDRSKGFGFVTFASVDEAQKA 91
Query: 92 REGMNAKYLDGWVIFVDPAKSRE---------ARPPPPP 121
N + +G VIFVD AK+++ AR PP P
Sbjct: 92 LMEFNGQQFNGRVIFVDYAKAKQSFGGGRYPIARGPPDP 130
>gi|225464267|ref|XP_002271224.1| PREDICTED: cold-inducible RNA-binding protein [Vitis vinifera]
gi|296088019|emb|CBI35302.3| unnamed protein product [Vitis vinifera]
Length = 170
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 57/79 (72%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
RL+VSGLS TT+E L+ AF FGQLV ++ D+ R +GF F+ Y++ EE+E+A EG
Sbjct: 80 RLYVSGLSFRTTEESLRNAFETFGQLVEVNLVMDKIANRPRGFAFLRYSTEEESEKAIEG 139
Query: 95 MNAKYLDGWVIFVDPAKSR 113
M+ K+LDG VIFV+ AK R
Sbjct: 140 MHGKFLDGRVIFVEVAKPR 158
>gi|359482021|ref|XP_002276063.2| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Vitis vinifera]
gi|297740158|emb|CBI30340.3| unnamed protein product [Vitis vinifera]
Length = 133
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 63/95 (66%), Gaps = 8/95 (8%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS TT++ L E F+ +GQ+V +K++ DR + RSKGFGFV++ S EEA++AR
Sbjct: 35 KLFVGGLSFYTTEKGLSEHFSQYGQVVEAKIVMDRVSDRSKGFGFVTFASEEEAQKARTE 94
Query: 95 MNAKYLDGWVIFVDPAKSRE--------ARPPPPP 121
M+ K L+G IFVD AK R AR PP P
Sbjct: 95 MDGKELNGRTIFVDYAKPRADFGGGMPIARGPPEP 129
>gi|363543257|ref|NP_001241843.1| uncharacterized protein LOC100857047 [Zea mays]
gi|238007748|gb|ACR34909.1| unknown [Zea mays]
gi|413916459|gb|AFW56391.1| putative glycine-rich protein [Zea mays]
Length = 261
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 67/109 (61%), Gaps = 12/109 (11%)
Query: 17 ILKSQLGSIRYNST------------LTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSK 64
+L ++LG + N+T ++S +LFV GLS T D L++ FA +GQ++ +K
Sbjct: 2 MLANKLGGLLKNATSSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAK 61
Query: 65 VITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSR 113
+I DR +GRS+GFGF++YTS EEA A M+ K LDG I V+ A R
Sbjct: 62 IILDRESGRSRGFGFITYTSSEEASAAITAMDGKTLDGRNIRVNHANER 110
>gi|255579369|ref|XP_002530529.1| RNA binding protein, putative [Ricinus communis]
gi|223529933|gb|EEF31861.1| RNA binding protein, putative [Ricinus communis]
Length = 127
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 61/95 (64%), Gaps = 8/95 (8%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS TTD+ L EAF+ +GQ+V + +++DR RSKGFGFV++ S +EA A
Sbjct: 32 KLFVGGLSFYTTDKGLTEAFSQYGQVVEATIVSDRVLDRSKGFGFVTFASEDEAHNALSE 91
Query: 95 MNAKYLDGWVIFVDPAKSRE--------ARPPPPP 121
MN K L+G VI+VD AK R AR PP P
Sbjct: 92 MNGKTLNGRVIYVDYAKPRTDSRNEVPIARGPPEP 126
>gi|15219486|ref|NP_177494.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|11120799|gb|AAG30979.1|AC012396_15 RNA-binding glycine-rich protein, putative [Arabidopsis thaliana]
gi|62867629|gb|AAY17418.1| At1g73530 [Arabidopsis thaliana]
gi|114050615|gb|ABI49457.1| At1g73530 [Arabidopsis thaliana]
gi|332197351|gb|AEE35472.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 181
Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 66/103 (64%), Gaps = 2/103 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+VSGLS TT++ L++ F FG L++ ++ D+ R KGF F+ Y + EEA +A +G
Sbjct: 78 KLYVSGLSFRTTEDTLRDTFEQFGNLIHMNMVMDKVANRPKGFAFLRYETEEEAMKAIQG 137
Query: 95 MNAKYLDGWVIFVDPAKSRE--ARPPPPPPYPEQQPSEMGFRT 135
M+ K+LDG VIFV+ AK+R +R P +P+ Q FRT
Sbjct: 138 MHGKFLDGRVIFVEEAKTRSDMSRAKPRRDFPKPQSKPRTFRT 180
>gi|215697937|dbj|BAG92098.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 111
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 56/75 (74%), Gaps = 5/75 (6%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
SP LF+SGLS+ TT + LKEAFA FG++++++V+TDR TG SKGFGFV Y ++E+A +
Sbjct: 35 SPNLFISGLSKRTTTDGLKEAFAKFGEVIHARVVTDRVTGFSKGFGFVRYATVEDAAKGI 94
Query: 93 EGMNAKYLDGWVIFV 107
EGM DG V F+
Sbjct: 95 EGM-----DGKVCFI 104
>gi|413938711|gb|AFW73262.1| chloroplast protein synthesis 4 [Zea mays]
Length = 400
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 69/111 (62%), Gaps = 2/111 (1%)
Query: 3 FASSFRRALSSGSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVY 62
F S + SG +KS G+ + + + RLFV+GLS T+++ L+ AF PFG+LV
Sbjct: 272 FGSDNKNYKVSGDDGVKSSEGTGAVD--IKTKRLFVTGLSFYTSEKTLRAAFEPFGELVE 329
Query: 63 SKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSR 113
K+I DR + RSKG+ FV YT+ E A + MN + ++GW+I VD AK+R
Sbjct: 330 VKIIMDRISKRSKGYAFVEYTTEEAGGAALKAMNGQIINGWMIVVDVAKTR 380
>gi|242073000|ref|XP_002446436.1| hypothetical protein SORBIDRAFT_06g016070 [Sorghum bicolor]
gi|241937619|gb|EES10764.1| hypothetical protein SORBIDRAFT_06g016070 [Sorghum bicolor]
Length = 135
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 70/119 (58%), Gaps = 16/119 (13%)
Query: 12 SSGSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRAT 71
++ S+L +Q I Y +LFV GLS+ T+E L EAF+ +GQ++ + V+ D+ T
Sbjct: 20 AAARSMLLAQSRGITY-------KLFVGGLSQFATEESLAEAFSRYGQVIEATVVRDKVT 72
Query: 72 GRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSRE---------ARPPPPP 121
KGFGFV + S EEA ARE MN K L+G VI+VD AK++ AR PP P
Sbjct: 73 DIPKGFGFVKFASPEEANNAREEMNGKALNGRVIYVDIAKAKPDRATDALPIARGPPKP 131
>gi|226510389|ref|NP_001150093.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195636652|gb|ACG37794.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 135
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 61/96 (63%), Gaps = 9/96 (9%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS+ T+ L EAF+ +GQ++ + V+ D+ T KGFGFV + S EEA ARE
Sbjct: 36 KLFVGGLSQFATEASLAEAFSRYGQVIEATVVRDKVTDVPKGFGFVKFASPEEANNAREE 95
Query: 95 MNAKYLDGWVIFVDPAKSRE---------ARPPPPP 121
MN K L+G VI+VD AK+R+ AR PP P
Sbjct: 96 MNGKALNGRVIYVDIAKARQDRAADALPIARGPPKP 131
>gi|194699346|gb|ACF83757.1| unknown [Zea mays]
gi|414587318|tpg|DAA37889.1| TPA: glycine-rich RNA-binding protein 2 [Zea mays]
Length = 135
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 61/96 (63%), Gaps = 9/96 (9%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS+ T+ L EAF+ +GQ++ + V+ D+ T KGFGFV + S EEA ARE
Sbjct: 36 KLFVGGLSQFATEASLAEAFSRYGQVIEATVVRDKVTDVPKGFGFVKFASPEEANNAREE 95
Query: 95 MNAKYLDGWVIFVDPAKSRE---------ARPPPPP 121
MN K L+G VI+VD AK+R+ AR PP P
Sbjct: 96 MNGKALNGRVIYVDIAKARQDRAADALPIARGPPKP 131
>gi|226532482|ref|NP_001150574.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|195640298|gb|ACG39617.1| glycine-rich RNA-binding protein 7 [Zea mays]
Length = 253
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 67/112 (59%), Gaps = 15/112 (13%)
Query: 17 ILKSQLGSIRYNST---------------LTSPRLFVSGLSRLTTDEKLKEAFAPFGQLV 61
+L ++LG + N+T ++S +LFV GLS T D L++ FA +GQ++
Sbjct: 2 MLANKLGGLLKNATSSKSSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYGQVI 61
Query: 62 YSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSR 113
+K+I DR +GRS+GFGF++YTS EEA A M+ K LDG I V+ A R
Sbjct: 62 EAKIILDRESGRSRGFGFITYTSSEEASAAITAMDGKTLDGRNIRVNHANER 113
>gi|222623613|gb|EEE57745.1| hypothetical protein OsJ_08262 [Oryza sativa Japonica Group]
Length = 369
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 31 LTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAER 90
+ + RLFV+GLS T+++ L+ AF PFG+LV K+I D+ + RSKG+ F+ YT+ E
Sbjct: 262 VKTKRLFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDKISKRSKGYAFIEYTTEEAGGA 321
Query: 91 AREGMNAKYLDGWVIFVDPAKSREARPPPP 120
A + MN + ++GW+I VD AK R PP
Sbjct: 322 ALKAMNGQIINGWMIVVDVAKHRSRDRQPP 351
>gi|115481496|ref|NP_001064341.1| Os10g0321700 [Oryza sativa Japonica Group]
gi|110288867|gb|ABG66004.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113638950|dbj|BAF26255.1| Os10g0321700 [Oryza sativa Japonica Group]
Length = 317
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 72/111 (64%), Gaps = 11/111 (9%)
Query: 1 MAF----ASSFRRALSSGSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAP 56
MAF + R++ SGS + ++ +R ++S +LF+ G+S T D+ LKEAFA
Sbjct: 1 MAFLRKVGNLVRQSAGSGSPLFQA----VR---CMSSSKLFIGGISYGTDDQSLKEAFAN 53
Query: 57 FGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFV 107
+G+++ ++VI DR TGRS+GFGFV+YTS +EA A GM+ K L G ++ V
Sbjct: 54 YGEVIEARVIVDRTTGRSRGFGFVTYTSTDEAAAAITGMDGKDLQGRIVRV 104
>gi|116781215|gb|ABK22008.1| unknown [Picea sitchensis]
Length = 140
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/111 (45%), Positives = 67/111 (60%), Gaps = 2/111 (1%)
Query: 1 MAFASSFRRALSSGSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQL 60
M+ FRR L G+ + S + S + +LFV GLS TT++ L EAF+ FG++
Sbjct: 1 MSMVPGFRRLL--GNYLSSPCPRSTVFFSRGVTTKLFVGGLSFYTTEKALTEAFSRFGEV 58
Query: 61 VYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAK 111
V KV+ DR + RSKGFGFV Y S +AERA+ MN K L G +IFVD K
Sbjct: 59 VEVKVVMDRVSQRSKGFGFVQYASEADAERAKAEMNGKVLSGRIIFVDTVK 109
>gi|259490527|ref|NP_001159310.1| uncharacterized protein LOC100304402 [Zea mays]
gi|223943329|gb|ACN25748.1| unknown [Zea mays]
gi|413938710|gb|AFW73261.1| chloroplast protein synthesis 4 [Zea mays]
Length = 398
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 58/83 (69%)
Query: 31 LTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAER 90
+ + RLFV+GLS T+++ L+ AF PFG+LV K+I DR + RSKG+ FV YT+ E
Sbjct: 296 IKTKRLFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDRISKRSKGYAFVEYTTEEAGGA 355
Query: 91 AREGMNAKYLDGWVIFVDPAKSR 113
A + MN + ++GW+I VD AK+R
Sbjct: 356 ALKAMNGQIINGWMIVVDVAKTR 378
>gi|15239958|ref|NP_196239.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
gi|9759319|dbj|BAB09686.1| unnamed protein product [Arabidopsis thaliana]
gi|17065276|gb|AAL32792.1| Unknown protein [Arabidopsis thaliana]
gi|20260002|gb|AAM13348.1| unknown protein [Arabidopsis thaliana]
gi|21593170|gb|AAM65119.1| unknown [Arabidopsis thaliana]
gi|332003601|gb|AED90984.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
Length = 146
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 64/100 (64%), Gaps = 10/100 (10%)
Query: 32 TSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERA 91
+ +LF+ GLS TT++ L EAF+ GQ+V ++++ DR + RSKGFGFV++ S +EA++A
Sbjct: 32 VASKLFIGGLSFCTTEQGLSEAFSKCGQVVEAQIVMDRVSDRSKGFGFVTFASADEAQKA 91
Query: 92 REGMNAKYLDGWVIFVDPAKSRE----------ARPPPPP 121
N + L+G IFVD AK+++ AR PP P
Sbjct: 92 LMEFNGQQLNGRTIFVDYAKAKQSLGGGGGYPIARGPPDP 131
>gi|115448473|ref|NP_001048016.1| Os02g0730800 [Oryza sativa Japonica Group]
gi|46390469|dbj|BAD15930.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|46390865|dbj|BAD16369.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|113537547|dbj|BAF09930.1| Os02g0730800 [Oryza sativa Japonica Group]
gi|218191513|gb|EEC73940.1| hypothetical protein OsI_08808 [Oryza sativa Indica Group]
Length = 399
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 31 LTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAER 90
+ + RLFV+GLS T+++ L+ AF PFG+LV K+I D+ + RSKG+ F+ YT+ E
Sbjct: 292 VKTKRLFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDKISKRSKGYAFIEYTTEEAGGA 351
Query: 91 AREGMNAKYLDGWVIFVDPAKSREARPPPP 120
A + MN + ++GW+I VD AK R PP
Sbjct: 352 ALKAMNGQIINGWMIVVDVAKHRSRDRQPP 381
>gi|2826811|emb|CAA05727.1| AtGRP2 [Arabidopsis thaliana]
Length = 150
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 73/122 (59%), Gaps = 9/122 (7%)
Query: 1 MAFASSF----RRALSSGSSI-LKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFA 55
MAF + R+ +SS ++ + S LGS+R L S +LF+ GLS T D L++AFA
Sbjct: 1 MAFCNKLGGLLRQNISSNGNVPVTSMLGSLR----LMSTKLFIGGLSWGTDDASLRDAFA 56
Query: 56 PFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREA 115
FG +V +KVI DR TGRS+GFGFV++ A A M+ K L+G I V+PA R +
Sbjct: 57 HFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPANDRPS 116
Query: 116 RP 117
P
Sbjct: 117 AP 118
>gi|388505224|gb|AFK40678.1| unknown [Lotus japonicus]
Length = 187
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 55/79 (69%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
RL+VSGLS TT+E L+ F FGQLV ++ D+ R +GF F+ Y + EE+++A EG
Sbjct: 95 RLYVSGLSFRTTEESLRNCFKNFGQLVDVNLVMDKLANRPRGFAFLRYATEEESQKAIEG 154
Query: 95 MNAKYLDGWVIFVDPAKSR 113
M+ K+LDG VIFV+ AK R
Sbjct: 155 MHGKFLDGRVIFVEVAKPR 173
>gi|30682622|ref|NP_849377.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|332657934|gb|AEE83334.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 153
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 73/122 (59%), Gaps = 9/122 (7%)
Query: 1 MAFASSF----RRALSSGSSI-LKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFA 55
MAF + R+ +SS ++ + S LGS+R L S +LF+ GLS T D L++AFA
Sbjct: 1 MAFCNKLGGLLRQNISSNGNVPVTSMLGSLR----LMSTKLFIGGLSWGTDDASLRDAFA 56
Query: 56 PFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREA 115
FG +V +KVI DR TGRS+GFGFV++ A A M+ K L+G I V+PA R +
Sbjct: 57 HFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPANDRPS 116
Query: 116 RP 117
P
Sbjct: 117 AP 118
>gi|15236359|ref|NP_193121.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|25090505|sp|Q9SVM8.1|GRP2_ARATH RecName: Full=Glycine-rich RNA-binding protein 2, mitochondrial;
Short=AtGRP2; Flags: Precursor
gi|4455314|emb|CAB36849.1| glycine-rich RNA-binding protein AtGRP2-like [Arabidopsis thaliana]
gi|7268089|emb|CAB78427.1| glycine-rich RNA-binding protein AtGRP2-like [Arabidopsis thaliana]
gi|18252853|gb|AAL62353.1| glycine-rich RNA-binding protein AtGRP2 - like [Arabidopsis
thaliana]
gi|21553749|gb|AAM62842.1| glycine-rich RNA-binding protein AtGRP2-like [Arabidopsis thaliana]
gi|25084267|gb|AAN72208.1| glycine-rich RNA-binding protein AtGRP2 - like [Arabidopsis
thaliana]
gi|332657933|gb|AEE83333.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 158
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 73/122 (59%), Gaps = 9/122 (7%)
Query: 1 MAFASSF----RRALSSGSSI-LKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFA 55
MAF + R+ +SS ++ + S LGS+R L S +LF+ GLS T D L++AFA
Sbjct: 1 MAFCNKLGGLLRQNISSNGNVPVTSMLGSLR----LMSTKLFIGGLSWGTDDASLRDAFA 56
Query: 56 PFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREA 115
FG +V +KVI DR TGRS+GFGFV++ A A M+ K L+G I V+PA R +
Sbjct: 57 HFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPANDRPS 116
Query: 116 RP 117
P
Sbjct: 117 AP 118
>gi|145333039|ref|NP_001078385.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|332657935|gb|AEE83335.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 144
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 73/122 (59%), Gaps = 9/122 (7%)
Query: 1 MAFASSF----RRALSSGSSI-LKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFA 55
MAF + R+ +SS ++ + S LGS+R L S +LF+ GLS T D L++AFA
Sbjct: 1 MAFCNKLGGLLRQNISSNGNVPVTSMLGSLR----LMSTKLFIGGLSWGTDDASLRDAFA 56
Query: 56 PFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREA 115
FG +V +KVI DR TGRS+GFGFV++ A A M+ K L+G I V+PA R +
Sbjct: 57 HFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPANDRPS 116
Query: 116 RP 117
P
Sbjct: 117 AP 118
>gi|224128992|ref|XP_002328863.1| predicted protein [Populus trichocarpa]
gi|118482403|gb|ABK93124.1| unknown [Populus trichocarpa]
gi|222839293|gb|EEE77630.1| predicted protein [Populus trichocarpa]
Length = 131
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 72/119 (60%), Gaps = 6/119 (5%)
Query: 3 FASSFRRALSSGSSI-LKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLV 61
F S R+++S + + S L SIR ++S +LF+ GL+ T D+ LK+AF+ FG++
Sbjct: 7 FGSLVRQSVSQNGQVPMASMLNSIR---CMSSSKLFIGGLAWSTDDQSLKDAFSGFGEVT 63
Query: 62 YSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREARPPPP 120
++VITDR TGRS+GFGFVSY S E A A M+ + L G I V A + R P P
Sbjct: 64 EARVITDRDTGRSRGFGFVSYESTESASEALSAMDGQELGGRNIRVGYATDK--RQPQP 120
>gi|449441097|ref|XP_004138320.1| PREDICTED: uncharacterized protein LOC101218446 [Cucumis sativus]
Length = 232
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 76/122 (62%), Gaps = 9/122 (7%)
Query: 1 MAFASSFRRALSSGSS------ILKSQLG---SIRYNSTLTSPRLFVSGLSRLTTDEKLK 51
MAF S F L G++ + +S L ++R+ S++ S ++FV G+S T D+ L+
Sbjct: 1 MAFLSKFGNILRQGANKRIGLDLHRSSLSLSQAVRWMSSMESSKVFVGGISFSTDDQSLR 60
Query: 52 EAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAK 111
EAF +G+++ ++VI DR TGRS+GFGFV+YTS EEA A + ++ + L G + V+ A
Sbjct: 61 EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120
Query: 112 SR 113
R
Sbjct: 121 DR 122
>gi|21553495|gb|AAM62588.1| glycine-rich RNA-binding protein, putative [Arabidopsis thaliana]
Length = 152
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 65/104 (62%), Gaps = 7/104 (6%)
Query: 9 RALSSGSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITD 68
RAL + +++L+ L +LT ++FV GLS T E LKEAF FG++V + V+ D
Sbjct: 15 RALQASNAMLQGNL-------SLTPSKIFVGGLSPSTDVELLKEAFGSFGKIVDAVVVLD 67
Query: 69 RATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKS 112
R +G S+GFGFV+Y SIE A A + M K LDG +I V PA S
Sbjct: 68 RESGLSRGFGFVTYDSIEVANNAMQAMQNKELDGRIIGVHPADS 111
>gi|388502672|gb|AFK39402.1| unknown [Medicago truncatula]
Length = 140
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 59/77 (76%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS TT++ L +AF+ +GQ+V +KVITDR + +SKG+GFV++ S +EAE+A
Sbjct: 33 KLFVGGLSFHTTEKTLSDAFSNYGQVVEAKVITDRISEKSKGYGFVTFASQDEAEKAITE 92
Query: 95 MNAKYLDGWVIFVDPAK 111
MN K L+G V+FVD AK
Sbjct: 93 MNEKALNGRVVFVDYAK 109
>gi|15221825|ref|NP_173298.1| glycine-rich RNA-binding protein 6 [Arabidopsis thaliana]
gi|9795594|gb|AAF98412.1|AC026238_4 Similar to glycine-rich RNA-binding proteins [Arabidopsis thaliana]
gi|29029110|gb|AAO64934.1| At1g18630 [Arabidopsis thaliana]
gi|110743184|dbj|BAE99483.1| hypothetical protein [Arabidopsis thaliana]
gi|332191616|gb|AEE29737.1| glycine-rich RNA-binding protein 6 [Arabidopsis thaliana]
Length = 155
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 65/104 (62%), Gaps = 7/104 (6%)
Query: 9 RALSSGSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITD 68
RAL + +++L+ L +LT ++FV GLS T E LKEAF FG++V + V+ D
Sbjct: 18 RALQASNAMLQGNL-------SLTPSKIFVGGLSPSTDVELLKEAFGSFGKIVDAVVVLD 70
Query: 69 RATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKS 112
R +G S+GFGFV+Y SIE A A + M K LDG +I V PA S
Sbjct: 71 RESGLSRGFGFVTYDSIEVANNAMQAMQNKELDGRIIGVHPADS 114
>gi|387861095|gb|AFK08577.1| glycine-rich RNA binding protein 2b [Camelina sativa]
gi|387861101|gb|AFK08580.1| glycine-rich RNA binding protein 2b [Camelina sativa]
Length = 156
Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 67/106 (63%), Gaps = 4/106 (3%)
Query: 12 SSGSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRAT 71
S G+ + S LGS+R L S +LFV GLS T D L++AFA FG++V +KVI DR T
Sbjct: 18 SGGNVPVTSMLGSLR----LMSTKLFVGGLSWGTDDASLRDAFAHFGEVVDAKVIVDRET 73
Query: 72 GRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREARP 117
GRS+GFGFV+++ A A M+ K L+G I V+PA R + P
Sbjct: 74 GRSRGFGFVNFSDETAASAAISEMDGKDLNGRNIRVNPANDRPSAP 119
>gi|449477140|ref|XP_004154942.1| PREDICTED: uncharacterized LOC101218446 [Cucumis sativus]
Length = 287
Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 76/122 (62%), Gaps = 9/122 (7%)
Query: 1 MAFASSFRRALSSGSS------ILKSQLG---SIRYNSTLTSPRLFVSGLSRLTTDEKLK 51
MAF S F L G++ + +S L ++R+ S++ S ++FV G+S T D+ L+
Sbjct: 1 MAFLSKFGNILRQGANKRIGLDLHRSSLSLSQAVRWMSSMESSKVFVGGISFSTDDQSLR 60
Query: 52 EAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAK 111
EAF +G+++ ++VI DR TGRS+GFGFV+YTS EEA A + ++ + L G + V+ A
Sbjct: 61 EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN 120
Query: 112 SR 113
R
Sbjct: 121 DR 122
>gi|544423|sp|Q99070.1|GRP2_SORBI RecName: Full=Glycine-rich RNA-binding protein 2
gi|21625|emb|CAA40862.1| glycine-rich RNA-binding protein [Sorghum bicolor]
Length = 168
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 56/78 (71%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T +E L++AFA FGQ++ SKVITDR TGRS+GFGFV+++S + A E
Sbjct: 9 RCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIEN 68
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN K LDG I V+ A+S
Sbjct: 69 MNGKELDGRNITVNQAQS 86
>gi|145333041|ref|NP_001078386.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|332657936|gb|AEE83336.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 129
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 71/118 (60%), Gaps = 9/118 (7%)
Query: 1 MAFASSF----RRALSSGSSI-LKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFA 55
MAF + R+ +SS ++ + S LGS+R L S +LF+ GLS T D L++AFA
Sbjct: 1 MAFCNKLGGLLRQNISSNGNVPVTSMLGSLR----LMSTKLFIGGLSWGTDDASLRDAFA 56
Query: 56 PFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSR 113
FG +V +KVI DR TGRS+GFGFV++ A A M+ K L+G I V+PA R
Sbjct: 57 HFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPANDR 114
>gi|224120444|ref|XP_002318331.1| predicted protein [Populus trichocarpa]
gi|222859004|gb|EEE96551.1| predicted protein [Populus trichocarpa]
Length = 181
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 56/79 (70%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+VSGLS TT+E L+ AF FGQLV ++ D+ R +GF F+ Y + EEA++A EG
Sbjct: 91 KLYVSGLSFRTTEESLRNAFQNFGQLVDVNLVMDKVAKRPRGFAFLRYETEEEAQKAIEG 150
Query: 95 MNAKYLDGWVIFVDPAKSR 113
M+ K+LDG VIFV+ AK R
Sbjct: 151 MHGKFLDGRVIFVEVAKPR 169
>gi|218195435|gb|EEC77862.1| hypothetical protein OsI_17125 [Oryza sativa Indica Group]
Length = 152
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 54/79 (68%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
RL+VSGLS TT+E L+ AF FGQL ++ +R R +GF F+SY S EE++ A EG
Sbjct: 71 RLYVSGLSFRTTEESLRNAFERFGQLTEVNLVMERVAKRPRGFAFLSYASEEESKNAMEG 130
Query: 95 MNAKYLDGWVIFVDPAKSR 113
M K+LDG VIFV+ A+ R
Sbjct: 131 MQGKFLDGRVIFVEVARQR 149
>gi|222629430|gb|EEE61562.1| hypothetical protein OsJ_15917 [Oryza sativa Japonica Group]
Length = 149
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 54/79 (68%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
RL+VSGLS TT+E L+ AF FGQL ++ +R R +GF F+SY S EE++ A EG
Sbjct: 68 RLYVSGLSFRTTEESLRNAFERFGQLTEVNLVMERVAKRPRGFAFLSYASEEESKNAMEG 127
Query: 95 MNAKYLDGWVIFVDPAKSR 113
M K+LDG VIFV+ A+ R
Sbjct: 128 MQGKFLDGRVIFVEVARQR 146
>gi|222612603|gb|EEE50735.1| hypothetical protein OsJ_31052 [Oryza sativa Japonica Group]
Length = 118
Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 56/78 (71%), Gaps = 4/78 (5%)
Query: 30 TLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAE 89
++S +LF+ G+S T D+ LKEAFA +G+++ ++VI DR TGRS+GFGFV+YTS +EA
Sbjct: 27 CMSSSKLFIGGISYGTDDQSLKEAFANYGEVIEARVIVDRTTGRSRGFGFVTYTSTDEAA 86
Query: 90 RAREGMNAKYLD----GW 103
A GM+ K +D GW
Sbjct: 87 AAITGMDGKVMDESLSGW 104
>gi|118487563|gb|ABK95608.1| unknown [Populus trichocarpa]
Length = 133
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 72/127 (56%), Gaps = 8/127 (6%)
Query: 8 RRALSSGSSI-LKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVI 66
R+++S + + S + SIR ++S +LF+ GL T D+ LK+AF+ FG++ ++VI
Sbjct: 12 RQSISQKGQVPMVSMVNSIR---CMSSSKLFIGGLPWSTDDQTLKDAFSGFGEVTEARVI 68
Query: 67 TDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQ 126
DR TGRS+GFGFV Y S+E A A M+ + L G + V A+ R PP Y +
Sbjct: 69 MDRETGRSRGFGFVHYDSVENASEALSAMDGQNLGGRTVRVSFAEERR----PPQSYNDN 124
Query: 127 QPSEMGF 133
GF
Sbjct: 125 HQGSRGF 131
>gi|116791319|gb|ABK25933.1| unknown [Picea sitchensis]
Length = 221
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 62/90 (68%), Gaps = 3/90 (3%)
Query: 24 SIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYT 83
++RY ++S RLF+ GLS D+ L+E+F +G+++ +++I DR TGRS+GFGF+S+T
Sbjct: 33 ALRY---MSSSRLFIGGLSYGMDDQSLRESFTEYGEVIEARIIHDRETGRSRGFGFISFT 89
Query: 84 SIEEAERAREGMNAKYLDGWVIFVDPAKSR 113
S EEA A GM+ K L G ++ V+ A R
Sbjct: 90 SNEEAAAAITGMDGKDLHGRLVHVNYATER 119
>gi|356576299|ref|XP_003556270.1| PREDICTED: uncharacterized protein LOC100791652 [Glycine max]
Length = 386
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 60/93 (64%), Gaps = 6/93 (6%)
Query: 31 LTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAER 90
L + +LFV+GLS T+++ L+ AF FG+LV KVI D+ + RSKG+ FV YT+ E A
Sbjct: 294 LKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKVIMDKISKRSKGYAFVEYTTEEAASA 353
Query: 91 AREGMNAKYLDGWVIFVDPAKSREARPPPPPPY 123
A + MN K ++GW+I VD AK P PP Y
Sbjct: 354 ALKEMNGKIINGWMIVVDVAK------PNPPRY 380
>gi|387861093|gb|AFK08576.1| glycine-rich RNA binding protein 2a [Camelina sativa]
gi|387861099|gb|AFK08579.1| glycine-rich RNA binding protein 2a [Camelina sativa]
Length = 160
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 68/112 (60%), Gaps = 7/112 (6%)
Query: 12 SSGSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRAT 71
S G+ + S LGS+R L S +LFV GLS T D+ L++AFA FG++V +KVI DR T
Sbjct: 18 SGGNVPVTSMLGSLR----LMSTKLFVGGLSWGTDDQSLRDAFAHFGEVVDAKVIVDRET 73
Query: 72 GRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREARPPPPPPY 123
GRS+GFGFV+++ A A M+ K L+G I V+ A RP P Y
Sbjct: 74 GRSRGFGFVNFSDETAASAAISEMDGKDLNGRNIRVNQAND---RPSAPRAY 122
>gi|1778374|gb|AAB71417.1| glycine-rich RNA-binding protein PsGRBP [Pisum sativum]
gi|206586422|gb|ACI15745.1| glycine-rich RNA-binding protein [Pisum sativum]
Length = 146
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 73/122 (59%), Gaps = 8/122 (6%)
Query: 1 MAFASSFRRALSSGSSI-----LKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFA 55
MAF + L G++ + S L +R+ ++S +LF+ GLS D+ LK+AFA
Sbjct: 1 MAFCNKLGNLLRQGATQSSHAPVSSMLNYLRH---MSSSKLFIGGLSYGVDDQSLKDAFA 57
Query: 56 PFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREA 115
+G++V ++VITDR TGRS+GFGFV++TS E A A M+ + L+G I V A R +
Sbjct: 58 SYGEVVEARVITDRDTGRSRGFGFVNFTSDESATSALSAMDGQDLNGRNIRVSYANDRPS 117
Query: 116 RP 117
P
Sbjct: 118 AP 119
>gi|223647416|gb|ACN10466.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 193
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 52/76 (68%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS TT+E L EAFA +G + VI D+ TGRS+GFGFV Y + E+A+ A EG
Sbjct: 6 KLFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDALEG 65
Query: 95 MNAKYLDGWVIFVDPA 110
MN K +DG I VD A
Sbjct: 66 MNGKSVDGRTIRVDEA 81
>gi|10799202|gb|AAG23220.1| glycine-rich RNA-binding protein [Sorghum bicolor]
Length = 170
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 55/78 (70%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T +E L+ AFA FGQ++ SKVITDR TGRS+GFGFV+++S + A E
Sbjct: 9 RCFVGGLAWATNNETLEHAFANFGQVLDSKVITDRETGRSRGFGFVTFSSEQSMLDAIEN 68
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN K LDG I V+ A+S
Sbjct: 69 MNGKELDGRNITVNQAQS 86
>gi|302762278|ref|XP_002964561.1| hypothetical protein SELMODRAFT_81392 [Selaginella moellendorffii]
gi|302814304|ref|XP_002988836.1| hypothetical protein SELMODRAFT_128832 [Selaginella moellendorffii]
gi|300143407|gb|EFJ10098.1| hypothetical protein SELMODRAFT_128832 [Selaginella moellendorffii]
gi|300168290|gb|EFJ34894.1| hypothetical protein SELMODRAFT_81392 [Selaginella moellendorffii]
Length = 149
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 59/82 (71%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S +LF+ GL+ T + L++AF+PFG+++ +VI DR TGRS+GFGFVSY + +EA++A
Sbjct: 36 SSKLFIGGLAWGTEERGLRDAFSPFGEIIEVRVIQDRETGRSRGFGFVSYITDQEAQKAM 95
Query: 93 EGMNAKYLDGWVIFVDPAKSRE 114
E M+ + LDG I V+ A R+
Sbjct: 96 EAMDGRVLDGRTIRVNYATQRQ 117
>gi|21553972|gb|AAM63053.1| glycine-rich RNA binding protein, putative [Arabidopsis thaliana]
Length = 136
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 69/122 (56%), Gaps = 9/122 (7%)
Query: 1 MAFASSFRRALSSGSSI-----LKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFA 55
MAF + L G S + S LGS+RY S +LFV GLS T D LK+AF
Sbjct: 1 MAFCNKLSGILRQGVSHSSNGPVTSMLGSLRY----MSSKLFVGGLSWGTDDSSLKQAFT 56
Query: 56 PFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREA 115
FG++ + VI DR TGRS+GFGFVS++ + A A + M+ K L+G I V+ A R +
Sbjct: 57 SFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKEMDGKELNGRQIRVNLATERSS 116
Query: 116 RP 117
P
Sbjct: 117 AP 118
>gi|449500867|ref|XP_004161215.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 134
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 63/92 (68%), Gaps = 4/92 (4%)
Query: 20 SQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGF 79
S+L S R +T +LFV GLS TTD+ L EAF+ +GQ++ + V+ DR + +SKGFGF
Sbjct: 25 SRLVSFRAIAT----KLFVGGLSYYTTDKGLSEAFSQYGQVIEATVVMDRVSDKSKGFGF 80
Query: 80 VSYTSIEEAERAREGMNAKYLDGWVIFVDPAK 111
V++ S++EA A MN K L+G VIFV+ AK
Sbjct: 81 VTFASLDEAHTALSEMNGKPLNGRVIFVNYAK 112
>gi|297793541|ref|XP_002864655.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297310490|gb|EFH40914.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 95
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 61/83 (73%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
+ +LFVS LS TTD+ L++ FAPFGQ++ +++I D+ T R KGFGF+++ S ++A+ A
Sbjct: 6 TTQLFVSRLSAYTTDQSLRQLFAPFGQIIEARLIRDQQTQRPKGFGFITFESEDDAQNAL 65
Query: 93 EGMNAKYLDGWVIFVDPAKSREA 115
+ +N K ++G +IFV+ AK EA
Sbjct: 66 KALNGKIVNGRLIFVEAAKEVEA 88
>gi|115488680|ref|NP_001066827.1| Os12g0502200 [Oryza sativa Japonica Group]
gi|77555842|gb|ABA98638.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113649334|dbj|BAF29846.1| Os12g0502200 [Oryza sativa Japonica Group]
gi|125579440|gb|EAZ20586.1| hypothetical protein OsJ_36195 [Oryza sativa Japonica Group]
gi|215694288|dbj|BAG89281.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215708787|dbj|BAG94056.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 258
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 68/113 (60%), Gaps = 3/113 (2%)
Query: 1 MAFASSFRRALSSGSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQL 60
MA A+ L +S + SIR ++S +LFV GLS T ++ L++ FA +GQ+
Sbjct: 1 MALANKIGNLLKRATSSSPALYQSIR---CMSSSKLFVGGLSYGTDEQSLRDTFANYGQV 57
Query: 61 VYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSR 113
+ +K+I DR TGRS+GFGF++Y S EEA A ++ K LDG I V+ A R
Sbjct: 58 IEAKIINDRETGRSRGFGFITYASSEEASAAITALDGKDLDGRNIRVNTANER 110
>gi|15229525|ref|NP_189025.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
gi|30687226|ref|NP_850629.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
gi|9294652|dbj|BAB03001.1| glycine-rich RNA binding protein-like [Arabidopsis thaliana]
gi|17979516|gb|AAL50093.1| AT3g23830/F14O13_2 [Arabidopsis thaliana]
gi|20453303|gb|AAM19890.1| AT3g23830/F14O13_2 [Arabidopsis thaliana]
gi|332643298|gb|AEE76819.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
gi|332643299|gb|AEE76820.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
Length = 136
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 69/122 (56%), Gaps = 9/122 (7%)
Query: 1 MAFASSFRRALSSGSSI-----LKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFA 55
MAF + L G S + S LGS+RY S +LFV GLS T D LK+AF
Sbjct: 1 MAFCNKLSGILRQGVSQSSNGPVTSMLGSLRY----MSSKLFVGGLSWGTDDSSLKQAFT 56
Query: 56 PFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREA 115
FG++ + VI DR TGRS+GFGFVS++ + A A + M+ K L+G I V+ A R +
Sbjct: 57 SFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKEMDGKELNGRQIRVNLATERSS 116
Query: 116 RP 117
P
Sbjct: 117 AP 118
>gi|246771225|gb|ACS94937.1| putative glycine-rich RNA-binding protein [Tamarix hispida]
Length = 143
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 70/115 (60%), Gaps = 7/115 (6%)
Query: 1 MAFA----SSFRRALSSGSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAP 56
MAF S R+ +S S+ + S L SIR ++S RLFV GLS T D+ LK+AF+
Sbjct: 1 MAFCNRIGSLIRQTVSQNSAPIDSMLNSIR---CMSSSRLFVGGLSWGTDDQSLKDAFSS 57
Query: 57 FGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAK 111
FG++ +KVITDR TGRS+GFGFV++ E A A M+ L+G I V A+
Sbjct: 58 FGEVTDAKVITDRETGRSRGFGFVNFVDNEAAGSALSSMDGVELNGRSIRVSFAQ 112
>gi|387861097|gb|AFK08578.1| glycine-rich RNA binding protein 2c [Camelina sativa]
gi|387861103|gb|AFK08581.1| glycine-rich RNA binding protein 2c [Camelina sativa]
Length = 158
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 66/106 (62%), Gaps = 4/106 (3%)
Query: 12 SSGSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRAT 71
S G+ + S LGS+R L S +LFV GLS T D L++AFA FG++V +KVI DR T
Sbjct: 18 SGGNVPVTSMLGSLR----LMSTKLFVGGLSWGTDDASLRDAFAHFGEVVDAKVIVDRET 73
Query: 72 GRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREARP 117
GR +GFGFV+++ A A M+ K L+G I V+PA R + P
Sbjct: 74 GRPRGFGFVNFSDETAASAAISEMDGKDLNGRNIRVNPANDRPSAP 119
>gi|4704605|gb|AAD28176.1|AF109917_1 glycine-rich RNA-binding protein [Picea glauca]
Length = 155
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 55/78 (70%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L+EAF+P+G++V SK+I+DR TGRS+GFGFV++ + A +
Sbjct: 9 RCFVGGLAWSTDDRSLQEAFSPYGEVVESKIISDRETGRSRGFGFVTFNDEQSMRDAIDA 68
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN K LDG I V+PA+S
Sbjct: 69 MNGKMLDGRSITVNPAQS 86
>gi|449462934|ref|XP_004149190.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 134
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 65/97 (67%), Gaps = 5/97 (5%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS TTD+ L EAF+ +GQ++ + V+ DR + +SKGFGFV++ S++EA A
Sbjct: 36 KLFVGGLSYYTTDKGLSEAFSQYGQVIEATVVMDRVSDKSKGFGFVTFASLDEAHTALSE 95
Query: 95 MNAKYLDGWVIFVDPAK----SREARPPPPPPYPEQQ 127
MN K L+G VIFV+ AK SR A P P PE++
Sbjct: 96 MNGKPLNGRVIFVNYAKPTTSSRGAIPIARGP-PEEK 131
>gi|125536731|gb|EAY83219.1| hypothetical protein OsI_38428 [Oryza sativa Indica Group]
Length = 257
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 68/107 (63%), Gaps = 7/107 (6%)
Query: 7 FRRALSSGSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVI 66
+RA SS ++ +S IR ++S +LFV GLS T ++ L++ FA +GQ++ +K+I
Sbjct: 11 LKRATSSSPALYQS----IR---CMSSSKLFVGGLSYGTDEQSLRDTFANYGQVIEAKII 63
Query: 67 TDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSR 113
DR TGRS+GFGF++Y S EEA A ++ K LDG I V+ A R
Sbjct: 64 NDRETGRSRGFGFITYASSEEASAAITALDGKDLDGRNIRVNTANER 110
>gi|388493798|gb|AFK34965.1| unknown [Medicago truncatula]
Length = 185
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 57/78 (73%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+FV+GL++ TT E L+EAF FG++ +V+ DR +G SKGFG+V Y + E+A + +GM
Sbjct: 46 VFVTGLNKRTTSETLREAFKKFGEVKQVRVVADRVSGYSKGFGYVRYATSEDAAKGIQGM 105
Query: 96 NAKYLDGWVIFVDPAKSR 113
+ K+L+GW++F + A+ R
Sbjct: 106 DGKFLEGWIVFAEYARPR 123
>gi|116780918|gb|ABK21879.1| unknown [Picea sitchensis]
Length = 172
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 56/78 (71%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L++AF+PFG+++ SK+I+DR TGRS+GFGFV+++ + A +
Sbjct: 10 RCFVGGLAWATDDRSLQDAFSPFGEILESKIISDRETGRSRGFGFVTFSDEQSMRDAIDA 69
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN K LDG I V+PA+S
Sbjct: 70 MNGKVLDGRNITVNPAQS 87
>gi|357152879|ref|XP_003576265.1| PREDICTED: glycine-rich RNA-binding protein blt801-like
[Brachypodium distachyon]
Length = 165
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 56/83 (67%)
Query: 31 LTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAER 90
+ R FV GL+ T D L+ AF+ FG+++ +K+I DR TGRS+GFGFV++ + E +
Sbjct: 1 MDEYRCFVGGLAWATDDHNLQSAFSNFGEILDAKIIQDRETGRSRGFGFVTFATEESMQA 60
Query: 91 AREGMNAKYLDGWVIFVDPAKSR 113
A EGMN K LDG I V+ A+SR
Sbjct: 61 AIEGMNGKELDGRSITVNQAQSR 83
>gi|226498016|ref|NP_001151732.1| RNA binding protein [Zea mays]
gi|195649405|gb|ACG44170.1| RNA binding protein [Zea mays]
Length = 147
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 53/79 (67%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
RL+VSGLS TT+ L++AF FG L ++ DR R +GF F+SYT EEA A EG
Sbjct: 66 RLYVSGLSFRTTERSLRDAFEKFGDLTEVCLVMDRVAKRPRGFAFLSYTGEEEARGAMEG 125
Query: 95 MNAKYLDGWVIFVDPAKSR 113
M+ K+LDG VIFV+ AK R
Sbjct: 126 MHGKFLDGRVIFVEVAKRR 144
>gi|224060337|ref|XP_002300149.1| predicted protein [Populus trichocarpa]
gi|222847407|gb|EEE84954.1| predicted protein [Populus trichocarpa]
Length = 133
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 71/127 (55%), Gaps = 8/127 (6%)
Query: 8 RRALSSGSSI-LKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVI 66
R+++S + + S L +IR ++S +LF+ GL D+ LK+AF+ FG++ ++VI
Sbjct: 12 RQSISQKGQVPMVSMLNTIR---CMSSSKLFIGGLPWSADDQTLKDAFSGFGEVTEARVI 68
Query: 67 TDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQ 126
DR TGRS+GFGFV Y S+E A A M+ + L G + V A+ R PP Y +
Sbjct: 69 MDRETGRSRGFGFVHYDSVENASEALSAMDGQNLGGRTVRVSFAEERR----PPQSYNDN 124
Query: 127 QPSEMGF 133
GF
Sbjct: 125 HQGSRGF 131
>gi|2674201|gb|AAC61786.1| glycine-rich RNA-binding protein [Euphorbia esula]
Length = 164
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 57/77 (74%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ TTD+ L+EAF+P+G+++ SK+I DR TGRS+GFGFV++ + + A +G
Sbjct: 8 RCFVGGLAWATTDQSLQEAFSPYGEILDSKIINDRETGRSRGFGFVTFNNEKSMRDAIQG 67
Query: 95 MNAKYLDGWVIFVDPAK 111
MN++ LDG I V+ A+
Sbjct: 68 MNSQELDGRNITVNEAQ 84
>gi|223973531|gb|ACN30953.1| unknown [Zea mays]
Length = 184
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 58/91 (63%)
Query: 31 LTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAER 90
L S +LF+ GL D KL+EAF+ FG++ ++VITDR TGRS+GFGFV+Y+ + A+
Sbjct: 34 LMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKE 93
Query: 91 AREGMNAKYLDGWVIFVDPAKSREARPPPPP 121
A M+ K +DG + V+ A R R PP
Sbjct: 94 AISAMDGKEIDGRQVRVNMANERPLRSTSPP 124
>gi|2624326|emb|CAA05728.1| OsGRP1 [Oryza sativa Japonica Group]
Length = 160
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 55/79 (69%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L+ AF+ FG+++ SK+I DR TGRS+GFGFV+++S + A EG
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTFGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 95 MNAKYLDGWVIFVDPAKSR 113
MN K LDG I V+ A+SR
Sbjct: 69 MNGKELDGRNITVNEAQSR 87
>gi|357454121|ref|XP_003597341.1| Cold-inducible RNA-binding protein [Medicago truncatula]
gi|355486389|gb|AES67592.1| Cold-inducible RNA-binding protein [Medicago truncatula]
gi|388509994|gb|AFK43063.1| unknown [Medicago truncatula]
Length = 89
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 59/81 (72%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFVS LS TT ++L+ F+PFG L + +ITD+ T R KGFGFVSY S EAE+AR+
Sbjct: 8 KLFVSRLSFYTTQQQLESLFSPFGVLTEATLITDQNTQRPKGFGFVSYKSEIEAEKARKA 67
Query: 95 MNAKYLDGWVIFVDPAKSREA 115
+N + +DG +IFV+ AK +++
Sbjct: 68 LNGRIVDGRLIFVEHAKPKDS 88
>gi|168037600|ref|XP_001771291.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677380|gb|EDQ63851.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 87
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 55/79 (69%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ TTD++L++AF PFG ++ SKVI+DR TGRS+GFGF+++ A +
Sbjct: 3 RCFVGGLAWATTDDRLEQAFRPFGDVIQSKVISDRETGRSRGFGFITFADENAMNEAIKE 62
Query: 95 MNAKYLDGWVIFVDPAKSR 113
MN K LDG I V+ A+SR
Sbjct: 63 MNGKELDGRNITVNQAQSR 81
>gi|115489714|ref|NP_001067344.1| Os12g0632000 [Oryza sativa Japonica Group]
gi|77557139|gb|ABA99935.1| Glycine-rich RNA-binding protein GRP1A, putative, expressed [Oryza
sativa Japonica Group]
gi|113649851|dbj|BAF30363.1| Os12g0632000 [Oryza sativa Japonica Group]
gi|125580173|gb|EAZ21319.1| hypothetical protein OsJ_36973 [Oryza sativa Japonica Group]
gi|215769456|dbj|BAH01685.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 162
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 55/79 (69%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L+ AF+ FG+++ SK+I DR TGRS+GFGFV+++S + A EG
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTFGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 95 MNAKYLDGWVIFVDPAKSR 113
MN K LDG I V+ A+SR
Sbjct: 69 MNGKELDGRNITVNEAQSR 87
>gi|829254|emb|CAA49174.1| glycine-rich RNA-binding protein [Arabidopsis thaliana]
Length = 139
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 62/100 (62%), Gaps = 4/100 (4%)
Query: 18 LKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGF 77
+ S LGS+R L S +LF+ GLS T D L++AFA FG +V +KVI DR TGRS+GF
Sbjct: 4 VTSMLGSLR----LMSTKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGF 59
Query: 78 GFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREARP 117
GFV++ A A M+ K L+G I V+PA R + P
Sbjct: 60 GFVNFNDEGAATAAISEMDGKELNGRHIRVNPANDRPSAP 99
>gi|303668381|gb|ADM16300.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 121
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS TT+E L EAFA +G + VI D+ TGRS+GFGFV Y + E+A+ A +G
Sbjct: 6 KLFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDALDG 65
Query: 95 MNAKYLDGWVIFVDPA 110
MN K +DG I VD A
Sbjct: 66 MNGKSVDGRTIRVDEA 81
>gi|351725255|ref|NP_001236574.1| uncharacterized protein LOC100527220 [Glycine max]
gi|255631812|gb|ACU16273.1| unknown [Glycine max]
Length = 138
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 69/118 (58%), Gaps = 8/118 (6%)
Query: 1 MAFASSFRRALSSGSSI-----LKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFA 55
MAF + L G++ + S L IR ++S +LF+ GLS D+ LK+AF+
Sbjct: 1 MAFCNKVGNVLRQGAARSTQAPVSSMLNYIR---CMSSSKLFIGGLSYGVDDQSLKDAFS 57
Query: 56 PFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSR 113
FG +V +KVITDR +GRS+GFGFV++++ E A A M+ K LDG I V A R
Sbjct: 58 GFGDVVDAKVITDRDSGRSRGFGFVNFSNDESASSALSAMDGKDLDGRSIRVSYANDR 115
>gi|212722916|ref|NP_001132731.1| uncharacterized protein LOC100194217 [Zea mays]
gi|194695242|gb|ACF81705.1| unknown [Zea mays]
gi|413933459|gb|AFW68010.1| responsive to abscisic acid15 [Zea mays]
Length = 96
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 56/79 (70%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T++E L+ AFA +G+++ SKVITDR TGRS+GFGFV+++S A E
Sbjct: 9 RCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIEN 68
Query: 95 MNAKYLDGWVIFVDPAKSR 113
MN K LDG I V+ A+SR
Sbjct: 69 MNGKELDGRNITVNQAQSR 87
>gi|224110196|ref|XP_002315444.1| predicted protein [Populus trichocarpa]
gi|222864484|gb|EEF01615.1| predicted protein [Populus trichocarpa]
Length = 311
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 67/111 (60%), Gaps = 12/111 (10%)
Query: 20 SQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGF 79
SQ+ +R + +LF++GLS T+++ L+ AF FG+LV K+I D+ + RSKG+ F
Sbjct: 211 SQITHVR------TKKLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAF 264
Query: 80 VSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSE 130
V YT+ E A A + MN K ++GW+I VD AKS PP Y +P +
Sbjct: 265 VKYTTEEAASSALKEMNGKIINGWMIVVDVAKSN------PPRYSRGRPRQ 309
>gi|326515712|dbj|BAK07102.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 104
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 55/79 (69%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D+ L+ AF+ +G ++ SK+ITDR TGRS+GFGFV++ S E +A E
Sbjct: 7 RCFVGGLAWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEA 66
Query: 95 MNAKYLDGWVIFVDPAKSR 113
MN + LDG I V+ A+SR
Sbjct: 67 MNGQDLDGRNITVNEAQSR 85
>gi|211906474|gb|ACJ11730.1| glycine-rich RNA-binding protein [Gossypium hirsutum]
Length = 168
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 54/79 (68%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L+EAF+ FG++V SK+I DR TGRS+GFGFV++ + A EG
Sbjct: 9 RCFVGGLAWATDDRALEEAFSAFGEIVESKIINDRETGRSRGFGFVTFRDEKAMRDAIEG 68
Query: 95 MNAKYLDGWVIFVDPAKSR 113
MN + LDG I V+ A+SR
Sbjct: 69 MNGQNLDGRNITVNEAQSR 87
>gi|108863012|gb|ABG22105.1| Glycine-rich RNA-binding protein GRP1A, putative, expressed [Oryza
sativa Japonica Group]
Length = 117
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 55/79 (69%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L+ AF+ FG+++ SK+I DR TGRS+GFGFV+++S + A EG
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTFGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 95 MNAKYLDGWVIFVDPAKSR 113
MN K LDG I V+ A+SR
Sbjct: 69 MNGKELDGRNITVNEAQSR 87
>gi|242055377|ref|XP_002456834.1| hypothetical protein SORBIDRAFT_03g043760 [Sorghum bicolor]
gi|241928809|gb|EES01954.1| hypothetical protein SORBIDRAFT_03g043760 [Sorghum bicolor]
Length = 147
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 57/85 (67%)
Query: 31 LTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAER 90
L S +LFV GLS D KL+EAF+ FG + ++VITDR TG+S+GFGFV+YTS + A
Sbjct: 34 LMSTKLFVGGLSWGVDDMKLREAFSGFGDVTEARVITDRDTGKSRGFGFVNYTSSDAANA 93
Query: 91 AREGMNAKYLDGWVIFVDPAKSREA 115
A GM+ K +DG + V+ A R A
Sbjct: 94 AISGMDGKEIDGRPVRVNIANDRPA 118
>gi|242083506|ref|XP_002442178.1| hypothetical protein SORBIDRAFT_08g015580 [Sorghum bicolor]
gi|241942871|gb|EES16016.1| hypothetical protein SORBIDRAFT_08g015580 [Sorghum bicolor]
Length = 250
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 55/81 (67%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S +LFV GLS T D L++ FA +G+++ +++I DR +GRS+GFGFV+YTS EEA A
Sbjct: 29 SSKLFVGGLSYGTDDHSLRDEFAKYGEVIEARIILDRESGRSRGFGFVTYTSSEEASAAI 88
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
M+ K LDG I V+ A R
Sbjct: 89 TAMDGKTLDGRSIRVNHANER 109
>gi|158516903|gb|ABW70168.1| putative glycine-rich RNA-binding protein 2 [Bambusa oldhamii]
Length = 162
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 60/85 (70%)
Query: 31 LTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAER 90
L S +LFV GLS T D+ LK+AF FG++V ++VITDR TG+S+GFGFVS+++ ++A+
Sbjct: 34 LMSTKLFVGGLSWGTDDQSLKDAFTSFGEVVEARVITDRDTGKSRGFGFVSFSNGDDAKN 93
Query: 91 AREGMNAKYLDGWVIFVDPAKSREA 115
A M+ + L+G I V+ A R A
Sbjct: 94 AMSSMDGQELEGRNIHVNFANERPA 118
>gi|225464121|ref|XP_002264164.1| PREDICTED: uncharacterized protein LOC100265361 [Vitis vinifera]
Length = 409
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 66/109 (60%), Gaps = 8/109 (7%)
Query: 22 LGSIRYN--STLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGF 79
L S+ N + + + +LFV+GLS T+++ L+ AF FG+LV K+I D+ + RSKG+ F
Sbjct: 303 LDSMEANQPTNIKTKKLFVTGLSFYTSEKTLRGAFEGFGELVEVKIIMDKISKRSKGYAF 362
Query: 80 VSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQP 128
+ YT+ E A A + MN K ++GW+I VD AK P P Y +P
Sbjct: 363 IEYTTEEAASAALKEMNGKIINGWMIVVDVAK------PTPQKYSRSRP 405
>gi|357442985|ref|XP_003591770.1| RNA-binding protein [Medicago truncatula]
gi|355480818|gb|AES62021.1| RNA-binding protein [Medicago truncatula]
Length = 284
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 6/95 (6%)
Query: 29 STLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEA 88
+++ + +LFV+GLS T+++ L+ AF FG+LV KVI D+ + RSKG+ F+ YT+ E A
Sbjct: 187 ASVKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKVIIDKISKRSKGYAFIEYTTEEAA 246
Query: 89 ERAREGMNAKYLDGWVIFVDPAKSREARPPPPPPY 123
A + MN K ++GW+I VD AK+ PP Y
Sbjct: 247 SAALKEMNGKIINGWMIVVDVAKTT------PPRY 275
>gi|116779573|gb|ABK21345.1| unknown [Picea sitchensis]
gi|224285462|gb|ACN40453.1| unknown [Picea sitchensis]
Length = 198
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 69/114 (60%), Gaps = 10/114 (8%)
Query: 8 RRALSSGSSILKSQLGSIRYN----STLTSP------RLFVSGLSRLTTDEKLKEAFAPF 57
R AL S LK S+R+ + L P +LFV+GLS TT+ L+ AF+ +
Sbjct: 52 RNALPFSSLSLKQPASSLRFRPLPVACLPPPTRTRNNKLFVTGLSIYTTERTLQNAFSNY 111
Query: 58 GQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAK 111
G++V ++I ++ T RSKGFGFV +++ EEA A + MN K L+GW+I VD AK
Sbjct: 112 GKVVDVRIIMNKTTRRSKGFGFVEFSTEEEANTALKEMNGKILNGWLISVDIAK 165
>gi|357143694|ref|XP_003573016.1| PREDICTED: uncharacterized protein LOC100843274 [Brachypodium
distachyon]
Length = 387
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 62/92 (67%), Gaps = 2/92 (2%)
Query: 29 STLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEA 88
+ + + RLFV+GLS T+++ L+ AF PFG+LV K+I D+ + RSKG+ F+ YT+ +
Sbjct: 283 ADVKTKRLFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDKISKRSKGYAFIEYTTEDAG 342
Query: 89 ERAREGMNAKYLDGWVIFVDPAKS--REARPP 118
A + MN + ++GW+I VD AK+ R +PP
Sbjct: 343 GAALKAMNGEIINGWMIVVDVAKTNLRNRQPP 374
>gi|974605|gb|AAA75104.1| single-stranded nucleic acid binding protein [Triticum aestivum]
Length = 167
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 56/82 (68%)
Query: 32 TSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERA 91
T R FV GL+ T D L++AF+ +G+++ +K+I DR TGRS+GFGFV++ S E +A
Sbjct: 4 TEYRCFVGGLAWATDDNNLQQAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMRQA 63
Query: 92 REGMNAKYLDGWVIFVDPAKSR 113
E MN K LDG I V+ A+SR
Sbjct: 64 IEEMNGKELDGRNITVNEAQSR 85
>gi|90265701|dbj|BAE91897.1| glycine-rich RNA-binding protein [Lolium perenne]
Length = 107
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 54/77 (70%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D+ L++AF+ FG++ K+I DR TGRS+GFGFV+++S E + A EG
Sbjct: 6 RCFVGGLAWATNDQSLEQAFSQFGEITDCKIINDRETGRSRGFGFVTFSSSESMKNAIEG 65
Query: 95 MNAKYLDGWVIFVDPAK 111
MN + LDG I V+ A+
Sbjct: 66 MNGQDLDGRNITVNEAQ 82
>gi|296087958|emb|CBI35241.3| unnamed protein product [Vitis vinifera]
Length = 315
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 66/109 (60%), Gaps = 8/109 (7%)
Query: 22 LGSIRYN--STLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGF 79
L S+ N + + + +LFV+GLS T+++ L+ AF FG+LV K+I D+ + RSKG+ F
Sbjct: 209 LDSMEANQPTNIKTKKLFVTGLSFYTSEKTLRGAFEGFGELVEVKIIMDKISKRSKGYAF 268
Query: 80 VSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQP 128
+ YT+ E A A + MN K ++GW+I VD AK P P Y +P
Sbjct: 269 IEYTTEEAASAALKEMNGKIINGWMIVVDVAK------PTPQKYSRSRP 311
>gi|6911144|gb|AAF31403.1|AF200322_1 putative glycine-rich RNA binding protein 3 [Catharanthus roseus]
Length = 164
Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 54/78 (69%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ TTD+ L EAF+ +G+++ SK+I DR TGRS+GFGFV++ + A EG
Sbjct: 9 RCFVGGLAWATTDQSLSEAFSQYGEILESKIINDRETGRSRGFGFVTFKDEQSMRDAIEG 68
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN + LDG I V+ A+S
Sbjct: 69 MNGQTLDGRNITVNEAQS 86
>gi|392593259|gb|EIW82584.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 116
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 58/83 (69%)
Query: 31 LTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAER 90
+ S +++V LS TTD+ L++AF+ FG +V S V+ DR TGRS+GFGFV+Y+S +EAE
Sbjct: 1 MNSAKIYVGNLSWNTTDDTLRQAFSTFGNVVDSVVMRDRDTGRSRGFGFVTYSSTQEAES 60
Query: 91 AREGMNAKYLDGWVIFVDPAKSR 113
A G+N + LDG I V+ A R
Sbjct: 61 AISGLNDQDLDGRRIKVNIANPR 83
>gi|75319742|sp|Q43472.1|GRP_HORVU RecName: Full=Glycine-rich RNA-binding protein blt801; AltName:
Full=Low temperature-responsive RNA-binding protein
gi|1229138|gb|AAB07749.1| low temperature-responsive RNA-binding protein [Hordeum vulgare
subsp. vulgare]
Length = 161
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 54/79 (68%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL T D+ L+ AF+ +G ++ SK+ITDR TGRS+GFGFV++ S E +A E
Sbjct: 7 RCFVGGLRWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEA 66
Query: 95 MNAKYLDGWVIFVDPAKSR 113
MN + LDG I V+ A+SR
Sbjct: 67 MNGQDLDGRNITVNEAQSR 85
>gi|226506948|ref|NP_001149776.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|195633803|gb|ACG36746.1| glycine-rich RNA-binding protein 7 [Zea mays]
Length = 276
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 66/113 (58%), Gaps = 4/113 (3%)
Query: 1 MAFASSFRRALSSGSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQL 60
MA A+ L +S S +IR S +LFV G+S T D L++ FA +GQ+
Sbjct: 1 MALANKLGGLLKKATSSNLSVYQAIR----CMSSKLFVGGISYQTDDHSLRDEFAKYGQV 56
Query: 61 VYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSR 113
+ +++I DR +GRS+GFGFV+YTS EEA A ++ K LDG I V+ A +
Sbjct: 57 IEARIIIDRESGRSRGFGFVTYTSSEEASAAITALDGKTLDGRSIRVNHANEK 109
>gi|357119387|ref|XP_003561423.1| PREDICTED: glycine-rich RNA-binding protein blt801-like
[Brachypodium distachyon]
Length = 161
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 54/78 (69%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L++AF+ FG+++ SK+I DR TGRS+GFGFV++ S + A EG
Sbjct: 7 RCFVGGLAWATDDRGLQDAFSSFGEIIDSKIINDRETGRSRGFGFVTFASEQSMRDAIEG 66
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN K LDG I V+ A+S
Sbjct: 67 MNGKDLDGRNITVNEAQS 84
>gi|297804934|ref|XP_002870351.1| hypothetical protein ARALYDRAFT_493528 [Arabidopsis lyrata subsp.
lyrata]
gi|297316187|gb|EFH46610.1| hypothetical protein ARALYDRAFT_493528 [Arabidopsis lyrata subsp.
lyrata]
Length = 154
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 65/104 (62%), Gaps = 4/104 (3%)
Query: 14 GSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGR 73
G+ + S LGS+R L S +LFV GLS T D+ L++AFA FG++V +KVI DR TGR
Sbjct: 19 GNVPVTSMLGSLR----LMSTKLFVGGLSWGTDDQSLRDAFAHFGEVVDAKVIVDRETGR 74
Query: 74 SKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREARP 117
S+GFGFV++ A A M+ K L+G I V+ A R + P
Sbjct: 75 SRGFGFVNFNDEGAASAAISEMDGKDLNGRNIRVNVANERPSAP 118
>gi|297741463|emb|CBI32594.3| unnamed protein product [Vitis vinifera]
Length = 121
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 55/78 (70%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D+ L+ AF+ FG+++ SK+I DR TGRS+GFGFV+++S + A EG
Sbjct: 9 RCFVGGLAWATDDQSLERAFSQFGEILESKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 68
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN + LDG I V+ A+S
Sbjct: 69 MNGQNLDGRNITVNEAQS 86
>gi|9757907|dbj|BAB08354.1| unnamed protein product [Arabidopsis thaliana]
Length = 112
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 58/78 (74%)
Query: 38 VSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNA 97
++GLS TTD+ L++ FAPFGQ+ S++I D+ T R KGFGF+++ S ++A++A + +N
Sbjct: 25 LAGLSAYTTDQSLRQLFAPFGQITESRLIKDQQTQRPKGFGFITFESEDDAQKALKALNG 84
Query: 98 KYLDGWVIFVDPAKSREA 115
K ++G +IFV+ AK EA
Sbjct: 85 KIVNGRLIFVETAKEVEA 102
>gi|169244425|gb|ACA50486.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
gi|306415963|gb|ADM86856.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
gi|385718874|gb|AFI71864.1| Glycin-rich RNA binding protein [Oryza sativa]
Length = 161
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 55/79 (69%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L+ AF+ +G+++ SK+I DR TGRS+GFGFV+++S + A EG
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 95 MNAKYLDGWVIFVDPAKSR 113
MN K LDG I V+ A+SR
Sbjct: 69 MNGKELDGRNITVNEAQSR 87
>gi|125537516|gb|EAY84004.1| hypothetical protein OsI_39235 [Oryza sativa Indica Group]
Length = 161
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 55/79 (69%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L+ AF+ +G+++ SK+I DR TGRS+GFGFV+++S + A EG
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 95 MNAKYLDGWVIFVDPAKSR 113
MN K LDG I V+ A+SR
Sbjct: 69 MNGKELDGRNITVNEAQSR 87
>gi|2645699|gb|AAC61787.1| glycine-rich RNA-binding protein [Euphorbia esula]
Length = 165
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 56/77 (72%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ TTD+ L+EAF+P+G+++ SK+I DR TGRS+GFGFV++ + + A +G
Sbjct: 8 RCFVGGLAWATTDQSLQEAFSPYGEILDSKIINDRETGRSRGFGFVTFNNEKSMRDAIQG 67
Query: 95 MNAKYLDGWVIFVDPAK 111
MN++ LDG V+ A+
Sbjct: 68 MNSQELDGRNTTVNEAQ 84
>gi|311698159|gb|ADQ00374.1| glycine-rich RNA-binding protein [Sequoia sempervirens]
Length = 194
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 55/79 (69%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L +AF+PFG+++ SK+++DR TGRS+GFGFV+++ + A E
Sbjct: 9 RCFVGGLAWATDDRSLHDAFSPFGEVLESKIVSDRETGRSRGFGFVTFSDEQAMMDAIEA 68
Query: 95 MNAKYLDGWVIFVDPAKSR 113
MN K LDG I V+ A+SR
Sbjct: 69 MNGKELDGRNITVNQAQSR 87
>gi|359806697|ref|NP_001241034.1| uncharacterized protein LOC100799124 [Glycine max]
gi|255645259|gb|ACU23127.1| unknown [Glycine max]
Length = 275
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 63/90 (70%)
Query: 24 SIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYT 83
+IR S+ S +LF+ G+S T ++ L+EAF+ +G++V +++I DR TGRS+GFGF++YT
Sbjct: 32 AIRCMSSAPSTKLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYT 91
Query: 84 SIEEAERAREGMNAKYLDGWVIFVDPAKSR 113
S+EEA A + ++ + L G I V+ A R
Sbjct: 92 SVEEASSAIQALDGQDLHGRPIRVNYANER 121
>gi|18103931|emb|CAC83314.1| glycine rich RNA binding protein [Oryza sativa Indica Group]
Length = 194
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 55/79 (69%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L+ AF+ +G+++ SK+I DR TGRS+GFGFV+++S + A EG
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 95 MNAKYLDGWVIFVDPAKSR 113
MN K LDG I V+ A+SR
Sbjct: 69 MNGKELDGRNITVNEAQSR 87
>gi|218193471|gb|EEC75898.1| hypothetical protein OsI_12955 [Oryza sativa Indica Group]
Length = 139
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 55/79 (69%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L+ AF+ +G+++ SK+I DR TGRS+GFGFV+++S + A EG
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 68
Query: 95 MNAKYLDGWVIFVDPAKSR 113
MN K LDG I V+ A+SR
Sbjct: 69 MNGKELDGRNITVNEAQSR 87
>gi|255633638|gb|ACU17178.1| unknown [Glycine max]
Length = 196
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 63/90 (70%)
Query: 24 SIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYT 83
+IR S+ S +LF+ G+S T ++ L+EAF+ +G++V +++I DR TGRS+GFGF++YT
Sbjct: 32 AIRSMSSAPSTKLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYT 91
Query: 84 SIEEAERAREGMNAKYLDGWVIFVDPAKSR 113
S+EEA A + ++ + L G I V+ A R
Sbjct: 92 SVEEASSAIQALDGQDLHGRPIRVNYANER 121
>gi|212275199|ref|NP_001130054.1| uncharacterized protein LOC100191146 [Zea mays]
gi|194688180|gb|ACF78174.1| unknown [Zea mays]
gi|414878270|tpg|DAA55401.1| TPA: glycine-rich RNA-binding protein 7 [Zea mays]
Length = 254
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 55/81 (67%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S +LFV G+S T D L++ FA +GQ++ +++I DR +GRS+GFGFV+YTS EEA A
Sbjct: 29 SSKLFVGGISYQTDDHSLRDEFAKYGQVIEARIIIDRESGRSRGFGFVTYTSSEEASAAI 88
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
++ K LDG I V+ A +
Sbjct: 89 TALDGKTLDGRSIRVNHANEK 109
>gi|195654321|gb|ACG46628.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|238010482|gb|ACR36276.1| unknown [Zea mays]
Length = 252
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 55/81 (67%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S +LFV G+S T D L++ FA +GQ++ +++I DR +GRS+GFGFV+YTS EEA A
Sbjct: 29 SSKLFVGGISYQTDDHSLRDEFAKYGQVIEARIIIDRESGRSRGFGFVTYTSSEEASAAI 88
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
++ K LDG I V+ A +
Sbjct: 89 TALDGKTLDGRSIRVNHANEK 109
>gi|218184292|gb|EEC66719.1| hypothetical protein OsI_33054 [Oryza sativa Indica Group]
Length = 117
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 52/69 (75%)
Query: 30 TLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAE 89
++S +LF+ G+S T D+ LKEAFA +G+++ ++VI DR TGRS+GFGFV+YTS +EA
Sbjct: 27 CMSSSKLFIGGISYGTDDQSLKEAFANYGEVIEARVIVDRTTGRSRGFGFVTYTSTDEAA 86
Query: 90 RAREGMNAK 98
A GM+ K
Sbjct: 87 AAITGMDGK 95
>gi|115454539|ref|NP_001050870.1| Os03g0670700 [Oryza sativa Japonica Group]
gi|108710321|gb|ABF98116.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
gi|113549341|dbj|BAF12784.1| Os03g0670700 [Oryza sativa Japonica Group]
Length = 196
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 56/81 (69%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L+ AF+ +G+++ SK+I DR TGRS+GFGFV+++S + A EG
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 68
Query: 95 MNAKYLDGWVIFVDPAKSREA 115
MN K LDG I V+ A+SR +
Sbjct: 69 MNGKELDGRNITVNEAQSRRS 89
>gi|82623423|gb|ABB87126.1| putative glycine-rich RNA binding protein-like [Solanum tuberosum]
Length = 178
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 57/91 (62%), Gaps = 7/91 (7%)
Query: 22 LGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVS 81
+G + Y R FV GL+ TTD L EAF+ +G++V SK+I DR TGRS+GFGFV+
Sbjct: 1 MGDVEY-------RCFVGGLAWATTDNTLSEAFSQYGEVVESKIINDRETGRSRGFGFVT 53
Query: 82 YTSIEEAERAREGMNAKYLDGWVIFVDPAKS 112
+ + A EGMN + LDG I V+ A+S
Sbjct: 54 FKDEQAMRDAIEGMNGQDLDGRNITVNEAQS 84
>gi|356511826|ref|XP_003524623.1| PREDICTED: uncharacterized protein LOC100782808 [Glycine max]
Length = 274
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 63/90 (70%)
Query: 24 SIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYT 83
+IR S+ S +LF+ G+S T ++ L+EAF+ +G++V +++I DR TGRS+GFGF++YT
Sbjct: 32 AIRSMSSAPSTKLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYT 91
Query: 84 SIEEAERAREGMNAKYLDGWVIFVDPAKSR 113
S+EEA A + ++ + L G I V+ A R
Sbjct: 92 SVEEASSAIQALDGQDLHGRPIRVNYANER 121
>gi|226491121|ref|NP_001143351.1| uncharacterized protein LOC100275970 [Zea mays]
gi|195618716|gb|ACG31188.1| hypothetical protein [Zea mays]
Length = 295
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 71/117 (60%), Gaps = 10/117 (8%)
Query: 1 MAFAS----SFRRALSSGSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAP 56
MAFAS + RR L+ S L L +R ++S +LFV GLS T + LK+AF+
Sbjct: 1 MAFASRIGNALRRTLAPTCSPL---LQPVR---CMSSSKLFVGGLSFATDETTLKDAFSE 54
Query: 57 FGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSR 113
FG ++ +++I DR +GRS+GFGF+++TS EEA A M+ K L G I V+ A R
Sbjct: 55 FGNVLEARIIIDRESGRSRGFGFITFTSTEEASAAMTSMDGKELQGRNIRVNHANER 111
>gi|440804413|gb|ELR25290.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 146
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 56/83 (67%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S +LFV GLS T D L+ AF G+++ +KVI DR TG+S+GFGFV+++S +EAE A+
Sbjct: 2 SAKLFVGGLSWSTDDNSLRSAFEQHGEVIDAKVILDRDTGKSRGFGFVTFSSADEAEAAK 61
Query: 93 EGMNAKYLDGWVIFVDPAKSREA 115
+N LDG I VD A R++
Sbjct: 62 GALNQTDLDGREIRVDSASDRDS 84
>gi|326493798|dbj|BAJ85361.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 175
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 55/82 (67%)
Query: 32 TSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERA 91
T R FV GL+ T D L+ AF+ +G+++ +K+I DR TGRS+GFGFV++ S E +A
Sbjct: 4 TEYRCFVGGLAWATDDHNLQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMRQA 63
Query: 92 REGMNAKYLDGWVIFVDPAKSR 113
E MN K LDG I V+ A+SR
Sbjct: 64 IEEMNGKELDGRSITVNEAQSR 85
>gi|212276175|ref|NP_001130201.1| hypothetical protein [Zea mays]
gi|194688532|gb|ACF78350.1| unknown [Zea mays]
gi|414887483|tpg|DAA63497.1| TPA: hypothetical protein ZEAMMB73_917992 [Zea mays]
gi|414887484|tpg|DAA63498.1| TPA: hypothetical protein ZEAMMB73_917992 [Zea mays]
Length = 308
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 71/117 (60%), Gaps = 10/117 (8%)
Query: 1 MAFAS----SFRRALSSGSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAP 56
MAFAS + RR L+ S L L +R ++S +LFV GLS T + LK+AF+
Sbjct: 1 MAFASRIGNALRRTLAPTCSPL---LQPVR---CMSSSKLFVGGLSFATDETTLKDAFSE 54
Query: 57 FGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSR 113
FG ++ +++I DR +GRS+GFGF+++TS EEA A M+ K L G I V+ A R
Sbjct: 55 FGNVLEARIIIDRESGRSRGFGFITFTSTEEASAAMTSMDGKELQGRNIRVNHANER 111
>gi|120610816|ref|YP_970494.1| RNP-1-like RNA-binding protein [Acidovorax citrulli AAC00-1]
gi|120589280|gb|ABM32720.1| RNP-1-like RNA-binding protein [Acidovorax citrulli AAC00-1]
Length = 116
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 61/105 (58%), Gaps = 6/105 (5%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S +++V L TDE L+ FA FG + SK++TDR TGRSKGFGFV +S E+A+ A
Sbjct: 2 SCKIYVGNLPYSVTDESLRSNFAEFGGVTSSKIMTDRETGRSKGFGFVEMSSAEDAQSAI 61
Query: 93 EGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGFRTNK 137
G+N +DG I V+ A+ REA P P +G+ NK
Sbjct: 62 TGLNGLSVDGRSIVVNLARPREANGGPGGYSP------VGYAVNK 100
>gi|440577321|emb|CCI55328.1| PH01B001I13.24 [Phyllostachys edulis]
Length = 196
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 52/76 (68%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
LF+ GLS TT+E L+ AF FGQL ++ DR R +GF F+SY + EE++ A EGM
Sbjct: 118 LFIEGLSFRTTEESLRSAFERFGQLTEVNLVMDRVAKRPRGFAFLSYANEEESKNAMEGM 177
Query: 96 NAKYLDGWVIFVDPAK 111
+ K+LDG VIFV+ AK
Sbjct: 178 HGKFLDGRVIFVEVAK 193
>gi|293336981|ref|NP_001169115.1| uncharacterized protein LOC100382959 [Zea mays]
gi|223975005|gb|ACN31690.1| unknown [Zea mays]
gi|414887554|tpg|DAA63568.1| TPA: hypothetical protein ZEAMMB73_633512 [Zea mays]
Length = 103
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 58/84 (69%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S +FVS LS TT+E+ K+ F+PFG + ++++ D TGR KGFGFV Y+S EAE+A
Sbjct: 20 STEIFVSRLSFYTTEEEFKDIFSPFGTVEEARLMRDHQTGRMKGFGFVKYSSQAEAEKAV 79
Query: 93 EGMNAKYLDGWVIFVDPAKSREAR 116
+ M+ K L G +IFV+ AK E++
Sbjct: 80 KAMDGKILRGRLIFVEMAKGHESK 103
>gi|20152613|emb|CAD29693.1| putative glycine rich protein [Rumex obtusifolius]
Length = 168
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 55/78 (70%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D+ L+ AF+ +GQ++ SK+I DR TGRS+GFGFV+++S + A EG
Sbjct: 8 RCFVGGLAWATDDQSLERAFSNYGQVLESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 67
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN + LDG I V+ A+S
Sbjct: 68 MNGQDLDGRNITVNEAQS 85
>gi|224121390|ref|XP_002318570.1| predicted protein [Populus trichocarpa]
gi|222859243|gb|EEE96790.1| predicted protein [Populus trichocarpa]
Length = 255
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 57/87 (65%)
Query: 30 TLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAE 89
++S +LFV G+S T D LKEAF +G +V +++I DR TGRS+GFGFV+YTS EEA
Sbjct: 36 CMSSSKLFVGGISFQTDDNSLKEAFDKYGNVVEARIIMDRETGRSRGFGFVTYTSSEEAS 95
Query: 90 RAREGMNAKYLDGWVIFVDPAKSREAR 116
A + ++ + L G + V+ A R R
Sbjct: 96 SAIQALDGQDLHGRRVRVNYATERPQR 122
>gi|112994|sp|P10979.1|GRPA_MAIZE RecName: Full=Glycine-rich RNA-binding, abscisic acid-inducible
protein
gi|22313|emb|CAA31077.1| ABA-inducible gene protein [Zea mays]
gi|195605904|gb|ACG24782.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195617536|gb|ACG30598.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195620254|gb|ACG31957.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195637320|gb|ACG38128.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|226091|prf||1410284A abscisic acid inducible gene
Length = 157
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 55/78 (70%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T++E L+ AFA +G+++ SKVITDR TGRS+GFGFV+++S A E
Sbjct: 9 RCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIEN 68
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN K LDG I V+ A+S
Sbjct: 69 MNGKELDGRNITVNQAQS 86
>gi|413933457|gb|AFW68008.1| responsive to abscisic acid15 [Zea mays]
Length = 159
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 55/78 (70%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T++E L+ AFA +G+++ SKVITDR TGRS+GFGFV+++S A E
Sbjct: 9 RCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIEN 68
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN K LDG I V+ A+S
Sbjct: 69 MNGKELDGRNITVNQAQS 86
>gi|226491203|ref|NP_001151562.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195647746|gb|ACG43341.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 156
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 55/78 (70%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T++E L+ AFA +G+++ SKVITDR TGRS+GFGFV+++S A E
Sbjct: 9 RCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIEN 68
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN K LDG I V+ A+S
Sbjct: 69 MNGKELDGRNITVNQAQS 86
>gi|195645042|gb|ACG41989.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 142
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 55/78 (70%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T++E L+ AFA +G+++ SKVITDR TGRS+GFGFV+++S A E
Sbjct: 9 RCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIEN 68
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN K LDG I V+ A+S
Sbjct: 69 MNGKELDGRNITVNQAQS 86
>gi|194700358|gb|ACF84263.1| unknown [Zea mays]
gi|413933458|gb|AFW68009.1| responsive to abscisic acid15 [Zea mays]
Length = 140
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 55/78 (70%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T++E L+ AFA +G+++ SKVITDR TGRS+GFGFV+++S A E
Sbjct: 9 RCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIEN 68
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN K LDG I V+ A+S
Sbjct: 69 MNGKELDGRNITVNQAQS 86
>gi|255571962|ref|XP_002526922.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223533674|gb|EEF35409.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 166
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 56/78 (71%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T+D+ L+EAF+ +G+++ SK+I DR TGRS+GFGFV++ + + A EG
Sbjct: 9 RCFVGGLAWATSDKALEEAFSAYGEVLESKIINDRETGRSRGFGFVTFNNEKSMRDAIEG 68
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN + LDG I V+ A+S
Sbjct: 69 MNGQNLDGRNITVNEAQS 86
>gi|18076086|emb|CAC80549.1| glycine-rich RNA-binding protein [Ricinus communis]
Length = 165
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 56/78 (71%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T+D+ L+EAF+ +G+++ SK+I DR TGRS+GFGFV++ + + A EG
Sbjct: 9 RCFVGGLAWATSDKALEEAFSAYGEVLESKIINDRETGRSRGFGFVTFNNEKSMRDAIEG 68
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN + LDG I V+ A+S
Sbjct: 69 MNGQNLDGRNITVNEAQS 86
>gi|76160980|gb|ABA40453.1| RNA binding protein-like protein [Solanum tuberosum]
gi|76160996|gb|ABA40461.1| RNA binding protein-like protein [Solanum tuberosum]
Length = 150
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 73/125 (58%), Gaps = 13/125 (10%)
Query: 1 MAFASSF----RRALSSGSSILKS-----QLGSIRYNSTLTSPRLFVSGLSRLTTDEKLK 51
MAF + R+++S+G++ + L +IR S RLFV GLS T D+ LK
Sbjct: 1 MAFCNKLGGLLRQSISTGNAASANSPTPAMLNAIR----CMSSRLFVGGLSWGTDDQSLK 56
Query: 52 EAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAK 111
EAF FG +V +KVI DR +GRS+GFGFV+++ + A+ A M+ + L G I V+ A+
Sbjct: 57 EAFTSFGDVVDAKVIIDRDSGRSRGFGFVNFSDEDCAKEAMNAMDGQQLHGRNIRVNLAQ 116
Query: 112 SREAR 116
R R
Sbjct: 117 ERAPR 121
>gi|297830792|ref|XP_002883278.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297329118|gb|EFH59537.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 376
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 59/86 (68%)
Query: 31 LTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAER 90
+ + +LF++GLS T+++ L+ AF FG+LV K+I D+ + RSKG+ F+ YT+ E A
Sbjct: 281 IKTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFLEYTTEEAASA 340
Query: 91 AREGMNAKYLDGWVIFVDPAKSREAR 116
A + MN K ++GW+I VD AK++ R
Sbjct: 341 ALKEMNGKIINGWMIVVDVAKTKPFR 366
>gi|357126492|ref|XP_003564921.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 156
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 58/85 (68%)
Query: 31 LTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAER 90
S +LFV GLS T D LKEAF+ FG++ ++VITDR TGRS+GFGFV +++ E+A++
Sbjct: 34 FMSNKLFVGGLSWGTNDGSLKEAFSSFGEVYEARVITDRETGRSRGFGFVEFSNEEDAKK 93
Query: 91 AREGMNAKYLDGWVIFVDPAKSREA 115
A M+ + LDG + V+ A R A
Sbjct: 94 AASSMDGQELDGRSVRVNFANERPA 118
>gi|356541091|ref|XP_003539016.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 207
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 71/111 (63%), Gaps = 2/111 (1%)
Query: 4 ASSFRRALSSGSSILKSQLGSIRYN--STLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLV 61
A FR +S + + + LG I+++ S+ R FV GL+ T D+ L+ AF+ +G++V
Sbjct: 12 AWGFRLLRASLTPLNTNFLGFIQFSMASSDVEYRCFVGGLAWATDDQALERAFSQYGEIV 71
Query: 62 YSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKS 112
+K+I DR TGRS+GFGFV++ S + + A EGMN + LDG I V+ A+S
Sbjct: 72 ETKIINDRETGRSRGFGFVTFASEQSMKDAIEGMNGQNLDGRNITVNEAQS 122
>gi|147867424|emb|CAN83272.1| hypothetical protein VITISV_001132 [Vitis vinifera]
Length = 408
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 65/109 (59%), Gaps = 8/109 (7%)
Query: 22 LGSIRYN--STLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGF 79
L S+ N + + +LFV+GLS T+++ L+ AF FG+LV K+I D+ + RSKG+ F
Sbjct: 302 LDSMEANQPTNIKXKKLFVTGLSFYTSEKTLRGAFEGFGELVEVKIIMDKISKRSKGYAF 361
Query: 80 VSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQP 128
+ Y++ E A A + MN K ++GW+I VD AK P P Y +P
Sbjct: 362 IEYSTEEAASAALKEMNGKIINGWMIVVDVAK------PTPQKYSRSRP 404
>gi|19881711|gb|AAM01112.1|AC098682_16 Putative RNA-binding protein [Oryza sativa Japonica Group]
Length = 119
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 52/69 (75%)
Query: 30 TLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAE 89
++S +LF+ G+S T D+ LKEAFA +G+++ ++VI DR TGRS+GFGFV+YTS +EA
Sbjct: 27 CMSSSKLFIGGISYGTDDQSLKEAFANYGEVIEARVIVDRTTGRSRGFGFVTYTSTDEAA 86
Query: 90 RAREGMNAK 98
A GM+ K
Sbjct: 87 AAITGMDGK 95
>gi|118489085|gb|ABK96349.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 171
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 56/78 (71%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ TTD+ L+EAF+ +G+++ SK+I DR TGRS+GFGFV++ + + A +G
Sbjct: 8 RCFVGGLAWATTDQVLQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFGNEKAMRDAIDG 67
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN + LDG I V+ A+S
Sbjct: 68 MNGQDLDGRNITVNEAQS 85
>gi|118481677|gb|ABK92779.1| unknown [Populus trichocarpa]
gi|118481702|gb|ABK92791.1| unknown [Populus trichocarpa]
gi|118482754|gb|ABK93295.1| unknown [Populus trichocarpa]
gi|118483202|gb|ABK93505.1| unknown [Populus trichocarpa]
Length = 170
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 56/78 (71%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ TTD+ L+EAF+ +G+++ SK+I DR TGRS+GFGFV++ + + A +G
Sbjct: 8 RCFVGGLAWATTDQVLQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFGNEKAMRDAIDG 67
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN + LDG I V+ A+S
Sbjct: 68 MNGQDLDGRNITVNEAQS 85
>gi|359475330|ref|XP_003631658.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Vitis
vinifera]
Length = 162
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 54/77 (70%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D+ L+ AF+ FG+++ SK+I DR TGRS+GFGFV+++S + A EG
Sbjct: 9 RCFVGGLAWATDDQSLERAFSQFGEILESKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 68
Query: 95 MNAKYLDGWVIFVDPAK 111
MN + LDG I V+ A+
Sbjct: 69 MNGQNLDGRNITVNEAQ 85
>gi|728594|emb|CAA88558.1| glycine rich protein, RNA binding protein [Hordeum vulgare subsp.
vulgare]
Length = 173
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 55/82 (67%)
Query: 32 TSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERA 91
T R FV GL+ T D L+ AF+ +G+++ +K+I DR TGRS+GFGFV++ S E +A
Sbjct: 4 TEYRCFVGGLAWATDDHNLQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMRQA 63
Query: 92 REGMNAKYLDGWVIFVDPAKSR 113
E MN K LDG + V+ A+SR
Sbjct: 64 IEEMNGKELDGRQVTVNEAQSR 85
>gi|21388660|dbj|BAC00786.1| glycine-rich RNA-binding protein [Physcomitrella patens]
Length = 178
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 50/76 (65%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ TTD L+EAF PFG++V KVITDR TGRS+GFGFV++ A +
Sbjct: 6 RCFVGGLAWATTDGSLEEAFRPFGEVVQCKVITDRETGRSRGFGFVTFADENSMNEAIKD 65
Query: 95 MNAKYLDGWVIFVDPA 110
MN K LDG I V+ A
Sbjct: 66 MNGKELDGRNITVNQA 81
>gi|118488717|gb|ABK96169.1| unknown [Populus trichocarpa]
Length = 241
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 57/87 (65%)
Query: 30 TLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAE 89
++S ++F+ G+S T D LKEAF +G +V +++I DR TGRS+GFGFV+YTS EEA
Sbjct: 36 CMSSSKIFIGGISFQTDDNGLKEAFDKYGNVVEARIIMDRDTGRSRGFGFVTYTSSEEAS 95
Query: 90 RAREGMNAKYLDGWVIFVDPAKSREAR 116
A + M+ + L G + V+ A R R
Sbjct: 96 SAIQAMDGQDLHGRRVRVNYATERPQR 122
>gi|221221302|gb|ACM09312.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 131
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 51/76 (67%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS TT++ L EAF+ +G + VI DR TGR +GFGFV Y + E+A+ A EG
Sbjct: 6 KLFVGGLSFDTTEQSLAEAFSKYGNIAKCDVIMDRETGRPRGFGFVKYDNAEDAKDAMEG 65
Query: 95 MNAKYLDGWVIFVDPA 110
MN + LDG I V+ A
Sbjct: 66 MNGQSLDGRTIRVNEA 81
>gi|224105391|ref|XP_002313795.1| predicted protein [Populus trichocarpa]
gi|222850203|gb|EEE87750.1| predicted protein [Populus trichocarpa]
Length = 128
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 56/78 (71%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ TTD+ L+EAF+ +G+++ SK+I DR TGRS+GFGFV++ + + A +G
Sbjct: 7 RCFVGGLAWATTDQVLQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFGNEKAMRDAIDG 66
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN + LDG I V+ A+S
Sbjct: 67 MNGQDLDGRNITVNEAQS 84
>gi|168035555|ref|XP_001770275.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678492|gb|EDQ64950.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 106
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 50/76 (65%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ TTD L+EAF PFG++V KVITDR TGRS+GFGFV++ A +
Sbjct: 3 RCFVGGLAWATTDGSLEEAFRPFGEVVQCKVITDRETGRSRGFGFVTFADENSMNEAIKD 62
Query: 95 MNAKYLDGWVIFVDPA 110
MN K LDG I V+ A
Sbjct: 63 MNGKELDGRNITVNQA 78
>gi|115441831|ref|NP_001045195.1| Os01g0916600 [Oryza sativa Japonica Group]
gi|2624328|emb|CAA05729.1| OsGRP2 [Oryza sativa Japonica Group]
gi|19386753|dbj|BAB86134.1| OsGRP2 [Oryza sativa Japonica Group]
gi|20805007|dbj|BAB92683.1| OsGRP2 [Oryza sativa Japonica Group]
gi|113534726|dbj|BAF07109.1| Os01g0916600 [Oryza sativa Japonica Group]
gi|125528847|gb|EAY76961.1| hypothetical protein OsI_04919 [Oryza sativa Indica Group]
gi|125573102|gb|EAZ14617.1| hypothetical protein OsJ_04542 [Oryza sativa Japonica Group]
gi|215765299|dbj|BAG86996.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768370|dbj|BAH00599.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 150
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 58/88 (65%), Gaps = 3/88 (3%)
Query: 31 LTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAER 90
L S +LFV GLS T D+ LKEAF FG + ++VI DR +GRS+GFGFVS+ + ++A+
Sbjct: 34 LMSTKLFVGGLSWNTNDDSLKEAFTSFGDVTEARVINDRESGRSRGFGFVSFANGDDAKS 93
Query: 91 AREGMNAKYLDGWVIFVDPAKSREARPP 118
A + M+ K L+G I V+ A RPP
Sbjct: 94 AMDAMDGKELEGRSIRVNFANE---RPP 118
>gi|213510736|ref|NP_001133148.1| cold inducible RNA binding protein [Salmo salar]
gi|197632151|gb|ACH70799.1| hyperosmotic glycine rich protein-like [Salmo salar]
gi|221219968|gb|ACM08645.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|221221054|gb|ACM09188.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 154
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 51/76 (67%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS TT++ L EAF+ +G + VI DR TGR +GFGFV Y + E+A+ A EG
Sbjct: 6 KLFVGGLSFDTTEQSLAEAFSKYGNIAKCDVIMDRETGRPRGFGFVKYDNAEDAKDAMEG 65
Query: 95 MNAKYLDGWVIFVDPA 110
MN + LDG I V+ A
Sbjct: 66 MNGQSLDGRTIRVNEA 81
>gi|6911142|gb|AAF31402.1| putative glycine-rich RNA binding protein 1 [Catharanthus roseus]
Length = 137
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 55/78 (70%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ TTD+ L EAF+ +G+++ SK+I DR TGRS+GFGFV++ + + A EG
Sbjct: 9 RCFVGGLAWATTDQSLSEAFSQYGEVLESKIINDRETGRSRGFGFVTFGDEKSMKDAIEG 68
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN + LDG + V+ A+S
Sbjct: 69 MNGQTLDGRNVTVNEAQS 86
>gi|2331133|gb|AAB66885.1| glycine-rich protein [Oryza sativa Japonica Group]
Length = 161
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 55/79 (69%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T + L+ AF+ +G+++ SK+I DR TGRS+GFGFV+++S + A EG
Sbjct: 9 RCFVGGLAWATDNRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 95 MNAKYLDGWVIFVDPAKSR 113
MN K LDG I V+ A+SR
Sbjct: 69 MNGKELDGRNITVNEAQSR 87
>gi|224077836|ref|XP_002305429.1| predicted protein [Populus trichocarpa]
gi|118481826|gb|ABK92850.1| unknown [Populus trichocarpa]
gi|222848393|gb|EEE85940.1| predicted protein [Populus trichocarpa]
Length = 165
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 55/77 (71%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ TTD+ L+EAF+ +G+++ SK+I DR TGRS+GFGFV++ + + A +G
Sbjct: 8 RCFVGGLAWATTDQSLQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFNNEKAMRDAIDG 67
Query: 95 MNAKYLDGWVIFVDPAK 111
MN + LDG I V+ A+
Sbjct: 68 MNGQDLDGRNITVNEAQ 84
>gi|124268989|ref|YP_001022993.1| RNA-binding region RNP-1 [Methylibium petroleiphilum PM1]
gi|124261764|gb|ABM96758.1| RNA-binding region RNP-1 [Methylibium petroleiphilum PM1]
Length = 162
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 53/83 (63%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V L+ D+ L++AF FG + +KV+ DR TGRSKGFGFV S EA+ A EG
Sbjct: 4 KLYVGNLAYSVRDDDLQQAFGEFGAVTSAKVMMDRDTGRSKGFGFVEMGSDAEAQAAIEG 63
Query: 95 MNAKYLDGWVIFVDPAKSREARP 117
MN + L G I V+ A+ RE RP
Sbjct: 64 MNGQSLSGRAIVVNEARPREERP 86
>gi|351723185|ref|NP_001236758.1| uncharacterized protein LOC100499841 [Glycine max]
gi|255627057|gb|ACU13873.1| unknown [Glycine max]
Length = 143
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 69/118 (58%), Gaps = 8/118 (6%)
Query: 1 MAFASSFRRALSSGSSI-----LKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFA 55
MAF + L G++ + S L IR ++S +LF+ GLS D+ LK+AF+
Sbjct: 1 MAFCNKVGNVLRQGAARSTHAPVASMLNYIR---CMSSSKLFIGGLSYGVDDQSLKDAFS 57
Query: 56 PFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSR 113
FG +V +KVITDR +GRS+GFGFV++++ E A A M+ K L+G I V A +
Sbjct: 58 GFGDVVDAKVITDRDSGRSRGFGFVNFSNDESASSALSAMDGKDLNGRSIRVSYANDK 115
>gi|34851124|gb|AAL13082.1| putative glycine-rich RNA-binding protein [Prunus avium]
Length = 178
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 55/77 (71%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T ++ L+ AF+PFG+++ SK+I DR TGRS+GFGFV++++ + A EG
Sbjct: 9 RCFVGGLAWATDNDALERAFSPFGEIIESKIINDRETGRSRGFGFVTFSNEKAMRDAIEG 68
Query: 95 MNAKYLDGWVIFVDPAK 111
MN + LDG I V+ A+
Sbjct: 69 MNGQNLDGRNITVNEAQ 85
>gi|544426|sp|Q03878.1|GRP1_DAUCA RecName: Full=Glycine-rich RNA-binding protein
gi|18347|emb|CAA41152.1| glycine-rich protein [Daucus carota]
gi|445138|prf||1908438A Gly-rich protein
Length = 157
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 52/78 (66%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T DE L++AF+ FG + SK+I DR TGRS+GFGFV++ + A EG
Sbjct: 7 RCFVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEG 66
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN + LDG I V+ A+S
Sbjct: 67 MNGQELDGRNITVNEAQS 84
>gi|357152187|ref|XP_003576037.1| PREDICTED: glycine-rich RNA-binding protein blt801-like
[Brachypodium distachyon]
Length = 102
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 56/82 (68%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ +T D+ L+ AF FG+++ +KVI DR TGRS+GFGFV++T+ + + A
Sbjct: 5 RCFVGGLAWVTDDQSLENAFRSFGEILDAKVIPDRETGRSRGFGFVTFTTEQAMQNAINA 64
Query: 95 MNAKYLDGWVIFVDPAKSREAR 116
MN K +DG I V+ A++R R
Sbjct: 65 MNGKDIDGRTISVNMAQARNNR 86
>gi|356508388|ref|XP_003522939.1| PREDICTED: uncharacterized protein LOC100806292 [Glycine max]
Length = 185
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 57/84 (67%)
Query: 29 STLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEA 88
S + R FV GL+ T + L++AF+ +G++V SKVI DR TGRS+GFGFV++ S +
Sbjct: 3 SEVIEYRCFVGGLAWATDSDALEKAFSHYGEIVESKVIIDRETGRSRGFGFVTFASEQAM 62
Query: 89 ERAREGMNAKYLDGWVIFVDPAKS 112
+ A EGMN + LDG I V+ A+S
Sbjct: 63 KDAIEGMNGQNLDGRSITVNEAQS 86
>gi|356538787|ref|XP_003537882.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Glycine
max]
Length = 170
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 58/82 (70%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ +T ++ L++AF+ +G +V SKVI DR TGRS+GFGFV++ S + + A G
Sbjct: 9 RCFVGGLAWVTGNDALEKAFSIYGDIVESKVINDRETGRSRGFGFVTFASEQSMKDAIAG 68
Query: 95 MNAKYLDGWVIFVDPAKSREAR 116
MN + LDG I V+ A++R +R
Sbjct: 69 MNGQDLDGRNITVNEAQTRASR 90
>gi|353235522|emb|CCA67534.1| related to glycine-rich RNA-binding protein [Piriformospora indica
DSM 11827]
Length = 236
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 55/81 (67%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S +++V LS TTD+ L+EAF +G +V S V+ DR TGRS+GFGFV+Y+S EEA A
Sbjct: 2 SAKIYVGNLSWNTTDDTLREAFRQYGNVVDSIVMRDRETGRSRGFGFVTYSSEEEASNAI 61
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
G+N LDG I V+ A +R
Sbjct: 62 SGLNETSLDGRQIKVNLANAR 82
>gi|440796891|gb|ELR17992.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 147
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 52/78 (66%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S +LFV GLS T D L+ AF G++V +KVI DR TG+S+GFGFV++ S +EAE A+
Sbjct: 2 SAKLFVGGLSWGTDDNSLRSAFEQHGEVVDAKVIQDRDTGKSRGFGFVTFASADEAEAAK 61
Query: 93 EGMNAKYLDGWVIFVDPA 110
+N LDG I VD A
Sbjct: 62 NALNQTELDGREIRVDSA 79
>gi|148927167|ref|ZP_01810792.1| RNP-1 like RNA-binding protein [candidate division TM7 genomosp.
GTL1]
gi|147887382|gb|EDK72831.1| RNP-1 like RNA-binding protein [candidate division TM7 genomosp.
GTL1]
Length = 108
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 58/85 (68%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S +LF+ L+ TTD+ L+ FA G++ +KV+TDR +GRSKGFGFV+Y + E+A+ A
Sbjct: 2 SKKLFIGSLAYATTDDSLRAHFAEKGEVEEAKVVTDRDSGRSKGFGFVTYVNDEDADTAI 61
Query: 93 EGMNAKYLDGWVIFVDPAKSREARP 117
+ ++ LDG I V+ A+ RE RP
Sbjct: 62 KELDNSELDGRNIHVNEARPREERP 86
>gi|799015|emb|CAA89058.1| putative glycine rich RNA binding protein [Solanum tuberosum]
Length = 175
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 54/79 (68%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ TTD+ L +AF+ + ++V SK+I DR TGRS+GFGFV++ + A EG
Sbjct: 7 RCFVGGLAWATTDQTLSDAFSQYAEVVESKIINDRETGRSRGFGFVTFKDEQAMRDAIEG 66
Query: 95 MNAKYLDGWVIFVDPAKSR 113
MN + LDG I V+ A+SR
Sbjct: 67 MNRQDLDGRNITVNEAQSR 85
>gi|2267567|gb|AAB63581.1| glycine-rich RNA binding protein 1 [Pelargonium x hortorum]
gi|2267569|gb|AAB63582.1| glycine-rich RNA binding protein 2 [Pelargonium x hortorum]
Length = 166
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 54/77 (70%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L++AF+ +G++V SK+I DR TGRS+GFGFV++++ + A EG
Sbjct: 9 RCFVGGLAWATDDHALEQAFSQYGEVVESKIINDRETGRSRGFGFVTFSNEKSMNDAIEG 68
Query: 95 MNAKYLDGWVIFVDPAK 111
MN + LDG I V+ A+
Sbjct: 69 MNGQNLDGRNITVNEAQ 85
>gi|356538789|ref|XP_003537883.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Glycine
max]
Length = 140
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 53/83 (63%)
Query: 29 STLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEA 88
S R FV GL+ T D L++AF+ +G +V SK+I DR TGRS+GFGFV++ S
Sbjct: 3 SAYVEYRCFVGGLAWATDDHALEKAFSHYGNIVESKIINDRETGRSRGFGFVTFASENSM 62
Query: 89 ERAREGMNAKYLDGWVIFVDPAK 111
+ A EGMN + LDG I V+ A+
Sbjct: 63 KDAIEGMNGQNLDGRNITVNEAQ 85
>gi|356568734|ref|XP_003552565.1| PREDICTED: uncharacterized protein LOC100807155 [Glycine max]
Length = 244
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
Query: 30 TLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAE 89
+++S +LFV G+S T D L+E+FA +G+++ KVI DR TGRS+GFGFV++ + E+A
Sbjct: 36 SMSSAKLFVGGISYSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGFGFVTFATSEDAS 95
Query: 90 RAREGMNAKYLDGWVIFVDPAKSREARP 117
A +GM+ + L G I V+ A R +RP
Sbjct: 96 SAIQGMDGQDLHGRRIRVNYATER-SRP 122
>gi|255645506|gb|ACU23248.1| unknown [Glycine max]
Length = 243
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
Query: 30 TLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAE 89
+++S +LFV G+S T D L+E+FA +G+++ KVI DR TGRS+GFGFV++ + E+A
Sbjct: 36 SMSSAKLFVGGISYSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGFGFVTFATSEDAS 95
Query: 90 RAREGMNAKYLDGWVIFVDPAKSREARP 117
A +GM+ + L G I V+ A R +RP
Sbjct: 96 SAIQGMDGQDLHGRRIRVNYATER-SRP 122
>gi|449525960|ref|XP_004169984.1| PREDICTED: uncharacterized LOC101208465 [Cucumis sativus]
Length = 394
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 54/77 (70%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LF++GLS T+++ L+ AF FG+LV K+I D+ + RSKG+ FV YT+ E A A +
Sbjct: 307 KLFITGLSFYTSEKTLRAAFEGFGKLVEVKIIMDKISKRSKGYAFVEYTTEEAASAALKE 366
Query: 95 MNAKYLDGWVIFVDPAK 111
MN K ++GW+I VD AK
Sbjct: 367 MNGKIINGWMIVVDIAK 383
>gi|399886791|gb|AFP52931.1| RBP1 [Hordeum vulgare]
Length = 162
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 54/78 (69%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV LS T D L+ AF+ FG+++ +K+I DR TGRS+GFGFVS+++ + + A EG
Sbjct: 10 RCFVGSLSWNTDDRGLEAAFSSFGEILDAKIINDRETGRSRGFGFVSFSNEQAMQDAIEG 69
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN K LDG I V+ A+S
Sbjct: 70 MNGKELDGRSIVVNEAQS 87
>gi|449446458|ref|XP_004140988.1| PREDICTED: uncharacterized protein LOC101208465 [Cucumis sativus]
Length = 394
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 54/77 (70%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LF++GLS T+++ L+ AF FG+LV K+I D+ + RSKG+ FV YT+ E A A +
Sbjct: 307 KLFITGLSFYTSEKTLRAAFEGFGKLVEVKIIMDKISKRSKGYAFVEYTTEEAASAALKE 366
Query: 95 MNAKYLDGWVIFVDPAK 111
MN K ++GW+I VD AK
Sbjct: 367 MNGKIINGWMIVVDIAK 383
>gi|1009363|dbj|BAA11089.1| RGP-3 [Nicotiana sylvestris]
Length = 144
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 66/104 (63%), Gaps = 4/104 (3%)
Query: 13 SGSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATG 72
S +S +KS L ++R ST +LFV GLS T D+ L++AFA FG +V ++VI DR +G
Sbjct: 21 SATSPMKSMLDAVRCMST----KLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSG 76
Query: 73 RSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREAR 116
RS+GFGFV+++ E A A + M+ + L G I V A+ R R
Sbjct: 77 RSRGFGFVNFSDDECANEAIKAMDGQELQGRNIRVRIAQERAPR 120
>gi|356517068|ref|XP_003527212.1| PREDICTED: uncharacterized protein LOC100777821 [Glycine max]
Length = 182
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 54/78 (69%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T + L++AF+ FG++V SKVI DR TGRS+GFGFV++ + + A EG
Sbjct: 9 RCFVGGLAWATDHDALEKAFSQFGEIVESKVINDRETGRSRGFGFVTFATEQAMRDAIEG 68
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN + LDG I V+ A+S
Sbjct: 69 MNGQNLDGRNITVNEAQS 86
>gi|469070|dbj|BAA03741.1| RNA-binding glycine-rich protein-1a [Nicotiana sylvestris]
gi|295393563|gb|ADG03637.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 156
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 53/77 (68%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ TTD+ L EAF+ FG+++ SK+I DR TGRS+GFGFV++ + A EG
Sbjct: 7 RCFVGGLAWATTDQTLGEAFSQFGEILDSKIINDRETGRSRGFGFVTFKDEKAMRDAIEG 66
Query: 95 MNAKYLDGWVIFVDPAK 111
MN + LDG I V+ A+
Sbjct: 67 MNGQDLDGRNITVNEAQ 83
>gi|388521117|gb|AFK48620.1| unknown [Lotus japonicus]
Length = 161
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 65/89 (73%), Gaps = 4/89 (4%)
Query: 20 SQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGF 79
SQL +R T+TS ++FV GL+ TT++KL EAF+ +G+++ + ++ +RA RSKGFG+
Sbjct: 59 SQLPFLR---TMTS-KIFVKGLAFSTTEDKLAEAFSQYGKVLKADIVLNRAKTRSKGFGY 114
Query: 80 VSYTSIEEAERAREGMNAKYLDGWVIFVD 108
V++ E+A++A+ GMN K L G V++VD
Sbjct: 115 VTFAKEEDAQKAQIGMNRKILHGRVLYVD 143
>gi|18402803|ref|NP_566672.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|20466724|gb|AAM20679.1| unknown protein [Arabidopsis thaliana]
gi|21536799|gb|AAM61131.1| unknown [Arabidopsis thaliana]
gi|25084257|gb|AAN72206.1| unknown protein [Arabidopsis thaliana]
gi|332642921|gb|AEE76442.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 374
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 60/92 (65%)
Query: 31 LTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAER 90
+ + +LF++GLS T+++ L+ AF FG+LV K+I D+ + RSKG+ F+ YT+ E A
Sbjct: 279 VKTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFLEYTTEEAAGT 338
Query: 91 AREGMNAKYLDGWVIFVDPAKSREARPPPPPP 122
A + MN K ++GW+I VD AK++ R P
Sbjct: 339 ALKEMNGKIINGWMIVVDVAKTKPFRQNRSQP 370
>gi|326487468|dbj|BAJ89718.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510625|dbj|BAJ87529.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518508|dbj|BAJ88283.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520529|dbj|BAK07523.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326527353|dbj|BAK04618.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 161
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 53/77 (68%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D+ L+ AF+ +G ++ SK+ITDR TGRS+GFGFV++ S E +A E
Sbjct: 7 RCFVGGLAWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEA 66
Query: 95 MNAKYLDGWVIFVDPAK 111
MN + LDG I V+ A+
Sbjct: 67 MNGQDLDGRNITVNEAQ 83
>gi|114145394|dbj|BAF30986.1| glycine-rich RNA-binding protein [Triticum aestivum]
Length = 163
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 53/77 (68%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D+ L+ AF+ +G ++ SK+ITDR TGRS+GFGFV++ S E +A E
Sbjct: 7 RCFVGGLAWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEA 66
Query: 95 MNAKYLDGWVIFVDPAK 111
MN + LDG I V+ A+
Sbjct: 67 MNGQDLDGRNITVNEAQ 83
>gi|399931797|gb|AFP57448.1| RNA-binding glycine-rich protein [Nicotiana clevelandii]
Length = 144
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 65/104 (62%), Gaps = 4/104 (3%)
Query: 13 SGSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATG 72
S +S + S L ++R ST +LFV GLS T D+ L++AFA FG +V ++VI DR +G
Sbjct: 21 SATSTMPSMLDAVRCMST----KLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSG 76
Query: 73 RSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREAR 116
RS+GFGFV+++ E A A + M+ + L G I V A+ R R
Sbjct: 77 RSRGFGFVNFSDDESANEAIKAMDGQELQGRNIRVSIAQERAPR 120
>gi|357454123|ref|XP_003597342.1| Cold-inducible RNA-binding protein [Medicago truncatula]
gi|355486390|gb|AES67593.1| Cold-inducible RNA-binding protein [Medicago truncatula]
Length = 142
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 55/76 (72%)
Query: 40 GLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKY 99
GLS TT ++L+ F+PFG L + +ITD+ T R KGFGFVSY S EAE+AR+ +N +
Sbjct: 66 GLSFYTTQQQLESLFSPFGVLTEATLITDQNTQRPKGFGFVSYKSEIEAEKARKALNGRI 125
Query: 100 LDGWVIFVDPAKSREA 115
+DG +IFV+ AK +++
Sbjct: 126 VDGRLIFVEHAKPKDS 141
>gi|2226370|gb|AAC50020.1| RNA-binding protein [Nicotiana glutinosa]
Length = 156
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 54/78 (69%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ TTD+ L +AF+ +G+++ SK+I DR TGRS+GFGFV++ + A EG
Sbjct: 7 RCFVGGLAWATTDQTLGDAFSQYGEILDSKIINDRETGRSRGFGFVTFKDEQAMRDAIEG 66
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN + LDG I V+ A+S
Sbjct: 67 MNGQDLDGRNITVNEAQS 84
>gi|311780287|gb|ADQ08684.1| putative glycine-rich RNA-binding protein 1 [Malus hupehensis]
Length = 164
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 54/78 (69%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T +E L+ AF+ +G+++ SK+I DR TGRS+GFGFV++ S + A EG
Sbjct: 9 RCFVGGLAWATDNEALERAFSQYGEIIESKIINDRETGRSRGFGFVTFGSEQAMRDAIEG 68
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN + LDG I V+ A+S
Sbjct: 69 MNGQNLDGRNITVNEAQS 86
>gi|296142019|gb|ADG96008.1| putative glycine-rich RNA-binding protein 1 [Malus prunifolia]
Length = 171
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 54/78 (69%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T +E L+ AF+ +G+++ SK+I DR TGRS+GFGFV++ S + A EG
Sbjct: 9 RCFVGGLAWATDNEALERAFSQYGEIIESKIINDRETGRSRGFGFVTFGSEQAMRDAIEG 68
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN + LDG I V+ A+S
Sbjct: 69 MNGQNLDGRNITVNEAQS 86
>gi|30692256|ref|NP_849524.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
gi|332661646|gb|AEE87046.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
Length = 92
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 52/79 (65%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T DE L+ F+ FG ++ SK+I DR +GRS+GFGFV++ + A E
Sbjct: 7 RCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEE 66
Query: 95 MNAKYLDGWVIFVDPAKSR 113
MN K LDG VI V+ A+SR
Sbjct: 67 MNGKELDGRVITVNEAQSR 85
>gi|297733872|emb|CBI15119.3| unnamed protein product [Vitis vinifera]
Length = 163
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 57/84 (67%)
Query: 30 TLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAE 89
++S +LF+ GLS T D L+EAF +G+++ ++VI DR TGRS+GFGFV++TS EEA
Sbjct: 36 CMSSSKLFIGGLSYSTDDTSLREAFHKYGEVIEARVIVDRETGRSRGFGFVTFTSSEEAS 95
Query: 90 RAREGMNAKYLDGWVIFVDPAKSR 113
A + ++ + L G + V+ A R
Sbjct: 96 SAIQALDGQDLHGRRVRVNYATDR 119
>gi|225457213|ref|XP_002284026.1| PREDICTED: uncharacterized protein LOC100256940 [Vitis vinifera]
Length = 277
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 57/84 (67%)
Query: 30 TLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAE 89
++S +LF+ GLS T D L+EAF +G+++ ++VI DR TGRS+GFGFV++TS EEA
Sbjct: 36 CMSSSKLFIGGLSYSTDDTSLREAFHKYGEVIEARVIVDRETGRSRGFGFVTFTSSEEAS 95
Query: 90 RAREGMNAKYLDGWVIFVDPAKSR 113
A + ++ + L G + V+ A R
Sbjct: 96 SAIQALDGQDLHGRRVRVNYATDR 119
>gi|226505736|ref|NP_001150149.1| LOC100283778 [Zea mays]
gi|195605606|gb|ACG24633.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195606158|gb|ACG24909.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195637130|gb|ACG38033.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195645710|gb|ACG42323.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|238009788|gb|ACR35929.1| unknown [Zea mays]
gi|413951537|gb|AFW84186.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 156
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 56/85 (65%)
Query: 31 LTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAER 90
L S +LF+ GL D KL+EAF+ FG++ ++VITDR TGRS+GFGFV+Y+ + A+
Sbjct: 34 LMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKE 93
Query: 91 AREGMNAKYLDGWVIFVDPAKSREA 115
A M+ K +DG + V+ A R A
Sbjct: 94 AISAMDGKEIDGRQVRVNMANERPA 118
>gi|187373099|gb|ACD03270.1| glycine-rich RNA-binding protein [Nicotiana tabacum]
Length = 157
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 53/77 (68%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ TTD+ L +AF+ +G++V SK+I DR TGRS+GFGFV++ + A EG
Sbjct: 7 RCFVGGLAWATTDQTLGDAFSQYGEIVDSKIINDRETGRSRGFGFVTFKDEQAMRDAIEG 66
Query: 95 MNAKYLDGWVIFVDPAK 111
MN + LDG I V+ A+
Sbjct: 67 MNGQDLDGRNITVNEAQ 83
>gi|115473215|ref|NP_001060206.1| Os07g0602600 [Oryza sativa Japonica Group]
gi|113611742|dbj|BAF22120.1| Os07g0602600 [Oryza sativa Japonica Group]
gi|222637411|gb|EEE67543.1| hypothetical protein OsJ_25023 [Oryza sativa Japonica Group]
Length = 238
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 71/116 (61%), Gaps = 13/116 (11%)
Query: 1 MAFA----SSFRR-ALSSGSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFA 55
MAFA ++ RR ++SS S+L++ +R S +LFV GLS T D LK+ F+
Sbjct: 1 MAFAGRVVNALRRTSVSSNPSLLQA----VR----CMSSKLFVGGLSYATDDTTLKDVFS 52
Query: 56 PFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAK 111
+G ++ +++I DR TG+SKG+GF++YTS EEA A M+ K L G ++ V A
Sbjct: 53 HYGDVLEARIIIDRDTGKSKGYGFITYTSSEEAAAAVTAMDGKDLQGRIVRVSTAN 108
>gi|356526497|ref|XP_003531854.1| PREDICTED: uncharacterized protein LOC100818300 [Glycine max]
Length = 245
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
Query: 30 TLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAE 89
+++S +LFV G+S T D L+E+FA +G+++ KVI DR TGRS+GFGF+++ + E+A
Sbjct: 36 SMSSAKLFVGGISYSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGFGFITFATSEDAS 95
Query: 90 RAREGMNAKYLDGWVIFVDPAKSREARP 117
A +GM+ + L G I V+ A R +RP
Sbjct: 96 SAIQGMDGQDLHGRRIRVNYATER-SRP 122
>gi|6911146|gb|AAF31404.1|AF200323_1 putative glycine-rich RNA-binding protein 2 [Catharanthus roseus]
Length = 160
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 54/78 (69%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ TTD+ L EAF+ +G+++ SKVI DR TGRS+GFGFV++ + + A G
Sbjct: 9 RCFVGGLAWATTDQSLSEAFSQYGEVLESKVINDRETGRSRGFGFVTFGDEKSMKDAIVG 68
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN + LDG I V+ A+S
Sbjct: 69 MNGQTLDGRNITVNEAQS 86
>gi|7024451|dbj|BAA92156.1| glycine-rich RNA-binding protein [Citrus unshiu]
Length = 167
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 51/77 (66%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ TTD L EAF+ +G ++ SK+I DR TGRS+GFGFV++ + A EG
Sbjct: 9 RCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEG 68
Query: 95 MNAKYLDGWVIFVDPAK 111
MN + LDG I V+ A+
Sbjct: 69 MNGQNLDGRNITVNEAQ 85
>gi|399931799|gb|AFP57449.1| RNA-binding glycine-rich protein [Nicotiana glauca]
Length = 144
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 65/104 (62%), Gaps = 4/104 (3%)
Query: 13 SGSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATG 72
S +S + S L +IR ST +LFV GLS T D+ L++AFA FG +V ++VI DR +G
Sbjct: 21 SATSPMPSMLDAIRCMST----KLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSG 76
Query: 73 RSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREAR 116
RS+GFGFV+++ E A A + M+ + L G I V A+ R R
Sbjct: 77 RSRGFGFVNFSDDESANEAIKAMDGQELQGRNIRVSIAQERAPR 120
>gi|469072|dbj|BAA03743.1| RNA-binding gricine-rich protein-1c [Nicotiana sylvestris]
Length = 165
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 53/78 (67%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ TTD L EAF+ +G+++ SK+I DR TGRS+GFGFV++ + A EG
Sbjct: 7 RCFVGGLAWATTDRTLGEAFSQYGEVLESKIINDRETGRSRGFGFVTFGDEKSMRDAIEG 66
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN + LDG I V+ A+S
Sbjct: 67 MNGQDLDGRNITVNEAQS 84
>gi|406950086|gb|EKD80418.1| cp31AHv protein [uncultured bacterium]
Length = 122
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 57/88 (64%), Gaps = 5/88 (5%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
+ +LFV L+ TTD+ L+ F+ G + ++VITDRATGRSKGFGFV +S EEA++A
Sbjct: 2 ATKLFVGSLAWATTDDSLQAFFSQAGTVSSARVITDRATGRSKGFGFVEMSSDEEAQKAV 61
Query: 93 EGMNAKYLDGWVIFVDPAKSREARPPPP 120
+N K LDG I V+ EARP P
Sbjct: 62 AELNGKELDGRAIVVN-----EARPMEP 84
>gi|90704785|dbj|BAE92287.1| putative glycine-rich RNA binding protein [Cryptomeria japonica]
Length = 181
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 53/78 (67%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GLS T D LK+AF FG+++ SKV++DR TGRS+GFGFV++ + A EG
Sbjct: 9 RCFVGGLSWSTDDRSLKDAFTAFGEVMDSKVVSDRETGRSRGFGFVTFMDEQSMRDAIEG 68
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN + LDG I V+ A++
Sbjct: 69 MNGRDLDGRNITVNRAQA 86
>gi|15231311|ref|NP_190188.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|7630030|emb|CAB88326.1| RNA binding protein-like [Arabidopsis thaliana]
gi|46931202|gb|AAT06405.1| At3g46020 [Arabidopsis thaliana]
gi|50253530|gb|AAT71967.1| At3g46020 [Arabidopsis thaliana]
gi|332644581|gb|AEE78102.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 102
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 59/82 (71%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S +LFVS LS TTD+ L++ F+PFGQ+ +++I D T R KGFGF+++ S ++A +A
Sbjct: 6 SAQLFVSRLSAYTTDQSLRQLFSPFGQIKEARLIRDSETQRPKGFGFITFDSEDDARKAL 65
Query: 93 EGMNAKYLDGWVIFVDPAKSRE 114
+ ++ K +DG +IFV+ AK+ E
Sbjct: 66 KSLDGKIVDGRLIFVEVAKNAE 87
>gi|388494768|gb|AFK35450.1| unknown [Medicago truncatula]
Length = 176
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
Query: 30 TLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAE 89
+++S +LF+ G+S T + L+EAF+ +G ++ +K+I DR TGRS+GFGF+++ + EEA
Sbjct: 36 SMSSAKLFIGGVSYSTDETGLREAFSRYGDVLDAKIIMDRDTGRSRGFGFITFATSEEAS 95
Query: 90 RAREGMNAKYLDGWVIFVDPAKSREARP 117
A + M+ K LDG + V+ A R ARP
Sbjct: 96 SALQAMDNKELDGRTVRVNYATER-ARP 122
>gi|195642478|gb|ACG40707.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 153
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 56/85 (65%)
Query: 31 LTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAER 90
L S +LF+ GL D KL+EAF+ FG++ ++VITDR TGRS+GFGFV+Y+ + A+
Sbjct: 34 LMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKE 93
Query: 91 AREGMNAKYLDGWVIFVDPAKSREA 115
A M+ K +DG + V+ A R A
Sbjct: 94 AISAMDGKEIDGRQVRVNMANERPA 118
>gi|357457753|ref|XP_003599157.1| Cold-inducible RNA-binding protein [Medicago truncatula]
gi|355488205|gb|AES69408.1| Cold-inducible RNA-binding protein [Medicago truncatula]
Length = 134
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 54/76 (71%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
+ ++FV GL+ TT+EKL EAF+ +G +V + ++ ++A R KGFG+V++ EEA +A+
Sbjct: 31 TSKIFVKGLAFSTTEEKLAEAFSQYGNVVKADIVLNKAKKRCKGFGYVTFAEEEEARKAQ 90
Query: 93 EGMNAKYLDGWVIFVD 108
GMN K L G V++VD
Sbjct: 91 IGMNGKILHGRVLYVD 106
>gi|224104887|ref|XP_002313606.1| predicted protein [Populus trichocarpa]
gi|222850014|gb|EEE87561.1| predicted protein [Populus trichocarpa]
Length = 109
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 55/75 (73%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S ++FV GLS +T++K+ EAF+ FG+++ +K++ D+A R KG+GFV++ + AE+A
Sbjct: 33 SAKVFVKGLSFSSTEKKIAEAFSEFGEVIEAKIVMDKARKRPKGYGFVTFAKKDAAEKAC 92
Query: 93 EGMNAKYLDGWVIFV 107
EGMN K LDG I+V
Sbjct: 93 EGMNGKLLDGRAIYV 107
>gi|2293480|gb|AAB65412.1| glycine-rich protein [Oryza sativa Indica Group]
Length = 161
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 53/77 (68%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L+ AF+ +G+++ SK+I DR TGRS+GFGFV+++S + A EG
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 95 MNAKYLDGWVIFVDPAK 111
MN K LDG I V+ A+
Sbjct: 69 MNGKELDGRNITVNEAQ 85
>gi|323650232|gb|ADX97202.1| cold-inducible RNA-binding protein [Perca flavescens]
Length = 80
Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 49/76 (64%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LF+ GLS TT+E L AF FG + VI DR TG S+GFGFV Y + E+A+ A EG
Sbjct: 3 KLFIGGLSFDTTEESLAAAFGKFGTIEKVDVIKDRDTGYSRGFGFVKYENSEDAKDAMEG 62
Query: 95 MNAKYLDGWVIFVDPA 110
MN K LDG I VD A
Sbjct: 63 MNGKTLDGRAIRVDEA 78
>gi|357462751|ref|XP_003601657.1| Glycine-rich RNA-binding protein [Medicago truncatula]
gi|355490705|gb|AES71908.1| Glycine-rich RNA-binding protein [Medicago truncatula]
Length = 146
Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 71/120 (59%), Gaps = 9/120 (7%)
Query: 1 MAFASSFRRALSSGSSI-----LKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFA 55
MAF + L G++ + S L +R+ ++S +LF+ GLS D+ L++AF
Sbjct: 1 MAFCNKIGNLLRQGATQSTQAPVSSMLNYLRH---MSSSKLFIGGLSYNVDDQSLRDAFT 57
Query: 56 PFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREA 115
+G +V ++VITDR TGRS+GFGFV++TS E A A M+ + L+G I V A R+A
Sbjct: 58 TYGDVVEARVITDRETGRSRGFGFVNFTSEESATSALS-MDGQDLNGRNIRVSYANDRQA 116
>gi|410924411|ref|XP_003975675.1| PREDICTED: cold-inducible RNA-binding protein-like [Takifugu
rubripes]
Length = 170
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 49/76 (64%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LF+ GLS T +E L EAF +G + VI D+ TGRS+GFGFV Y S+E+A+ A
Sbjct: 6 KLFIGGLSFETNEESLAEAFGKYGTIEKVDVIRDKETGRSRGFGFVKYESVEDAKDAMTA 65
Query: 95 MNAKYLDGWVIFVDPA 110
MN K LDG I VD A
Sbjct: 66 MNGKSLDGRAIRVDEA 81
>gi|30683481|ref|NP_565646.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|106879155|gb|ABF82607.1| At2g27330 [Arabidopsis thaliana]
gi|330252880|gb|AEC07974.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 116
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 58/90 (64%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV G+S +T+E L +AF+ +GQ++ VI D+ R KGF +V+++S EEAE+A
Sbjct: 20 SSTLFVKGISFSSTEETLTQAFSQYGQVLKVDVIMDKIRCRPKGFAYVTFSSKEEAEKAL 79
Query: 93 EGMNAKYLDGWVIFVDPAKSREARPPPPPP 122
+NA+ +DG V+ +D K+ + PP P
Sbjct: 80 LELNAQLVDGRVVILDTTKAAKHNPPDTKP 109
>gi|108710322|gb|ABF98117.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
Length = 153
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 53/77 (68%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L+ AF+ +G+++ SK+I DR TGRS+GFGFV+++S + A EG
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 68
Query: 95 MNAKYLDGWVIFVDPAK 111
MN K LDG I V+ A+
Sbjct: 69 MNGKELDGRNITVNEAQ 85
>gi|50881454|gb|AAT85299.1| glycine-rich RNA-binding protein, putative [Oryza sativa Japonica
Group]
gi|108710320|gb|ABF98115.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
gi|154550663|gb|ABS83497.1| receptor-like serine threonine kinase [Oryza sativa Japonica Group]
gi|169244423|gb|ACA50485.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
gi|215697732|dbj|BAG91726.1| unnamed protein product [Oryza sativa Japonica Group]
gi|306415943|gb|ADM86846.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
Length = 162
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 53/77 (68%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L+ AF+ +G+++ SK+I DR TGRS+GFGFV+++S + A EG
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 68
Query: 95 MNAKYLDGWVIFVDPAK 111
MN K LDG I V+ A+
Sbjct: 69 MNGKELDGRNITVNEAQ 85
>gi|168015710|ref|XP_001760393.1| predicted protein [Physcomitrella patens subsp. patens]
gi|21388658|dbj|BAC00785.1| glycine-rich RNA binding protein [Physcomitrella patens]
gi|76262794|gb|ABA41484.1| glycine-rich RNA binding protein [Physcomitrella patens]
gi|162688407|gb|EDQ74784.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 162
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 53/78 (67%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ TTD +L+ AF PFG++V SKVI+DR TGRS+GFGFV++ A +
Sbjct: 8 RCFVGGLAWATTDGRLEGAFRPFGEVVQSKVISDRETGRSRGFGFVTFADENSMNAAIKE 67
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN + LDG I V+ A+S
Sbjct: 68 MNGQELDGRNITVNQAQS 85
>gi|408393961|gb|EKJ73218.1| hypothetical protein FPSE_06642 [Fusarium pseudograminearum CS3096]
Length = 112
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 54/80 (67%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S +L++ LS TTD+ L+ A FG ++ S V+ DR TGRS+GFGFV++ S+EEAE A
Sbjct: 2 SAKLYIGNLSWNTTDDTLRNACQEFGMIIDSIVMRDRDTGRSRGFGFVTFGSVEEAENAV 61
Query: 93 EGMNAKYLDGWVIFVDPAKS 112
G+N + LDG I V+ A +
Sbjct: 62 NGLNEQELDGRRIKVNMANA 81
>gi|399931807|gb|AFP57453.1| RNA-binding glycine-rich protein [Nicotiana rustica]
Length = 144
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 65/104 (62%), Gaps = 4/104 (3%)
Query: 13 SGSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATG 72
S +S + S L ++R ST +LFV GLS T D+ L++AFA FG +V ++VI DR +G
Sbjct: 21 SATSPMPSMLDAVRCMST----KLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSG 76
Query: 73 RSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREAR 116
RS+GFGFV+++ E A A + M+ + L G I V A+ R R
Sbjct: 77 RSRGFGFVNFSDDESANEAIKAMDGQELQGRNIRVSIAQERAPR 120
>gi|170098488|ref|XP_001880463.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644901|gb|EDR09150.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 154
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 59/81 (72%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S +++V LS TTD+ L++AF+ FGQ++ S V+ DR TGRS+GFGFV+++S +EA+ A
Sbjct: 2 SAKVYVGNLSWNTTDDTLRQAFSEFGQVLDSIVMRDRDTGRSRGFGFVTFSSGQEADAAI 61
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
G+N + LDG I V+ A +R
Sbjct: 62 GGLNEQELDGRRIKVNLANAR 82
>gi|147774036|emb|CAN71872.1| hypothetical protein VITISV_038162 [Vitis vinifera]
Length = 272
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 57/84 (67%)
Query: 30 TLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAE 89
++S +LF+ GLS T D L+EAF +G+++ ++VI DR TGRS+GFGFV++TS EEA
Sbjct: 36 CMSSSKLFIGGLSYSTDDTSLREAFYKYGEVIEARVIVDRETGRSRGFGFVTFTSSEEAS 95
Query: 90 RAREGMNAKYLDGWVIFVDPAKSR 113
A + ++ + L G + V+ A R
Sbjct: 96 SAIQALDGQDLHGRRVRVNYATDR 119
>gi|116783558|gb|ABK22994.1| unknown [Picea sitchensis]
Length = 157
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 55/81 (67%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S ++FV GLS D+ L+E+FA FG ++ +K+I DR TGRS+GFGFV++ S +EA A
Sbjct: 38 SSKVFVGGLSYGVDDQTLRESFATFGDVMEAKIINDRETGRSRGFGFVTFASPDEANAAV 97
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
E M+ K L G I V+ A+ R
Sbjct: 98 EAMDGKDLQGRSIRVNIAQER 118
>gi|224059014|ref|XP_002299678.1| predicted protein [Populus trichocarpa]
gi|222846936|gb|EEE84483.1| predicted protein [Populus trichocarpa]
Length = 147
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 50/77 (64%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R F+ GLS T+D LKE F FG L+ +KV+ D+ +GRS+GFGFV++ + E A EG
Sbjct: 8 RCFIGGLSWSTSDRGLKETFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEDAIEG 67
Query: 95 MNAKYLDGWVIFVDPAK 111
MN LDG I VD A+
Sbjct: 68 MNGMDLDGRTITVDKAQ 84
>gi|399931805|gb|AFP57452.1| RNA-binding glycine-rich protein [Nicotiana repanda]
Length = 144
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 65/104 (62%), Gaps = 4/104 (3%)
Query: 13 SGSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATG 72
S +S + S L ++R ST +LFV GLS T D+ L++AFA FG +V ++VI DR +G
Sbjct: 21 SATSPMPSMLDAVRCMST----KLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSG 76
Query: 73 RSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREAR 116
RS+GFGFV+++ E A A + M+ + L G I V A+ R R
Sbjct: 77 RSRGFGFVNFSDDESANEAIKAMDGQELQGRNIRVTIAQERAPR 120
>gi|449674933|ref|XP_002158647.2| PREDICTED: transformer-2 protein homolog beta-like [Hydra
magnipapillata]
Length = 221
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 56/88 (63%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L V GLS TTD +++EAF +G++V V+ D TGRS+GF F++ +SI EAE A+E M
Sbjct: 98 LGVFGLSLYTTDREVREAFERYGRVVDCNVVHDHNTGRSRGFAFLNMSSISEAEDAKERM 157
Query: 96 NAKYLDGWVIFVDPAKSREARPPPPPPY 123
N LDG I VD + ++ A P P Y
Sbjct: 158 NGAELDGRRIRVDFSITQRAHTPTPGVY 185
>gi|168034678|ref|XP_001769839.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678948|gb|EDQ65401.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 133
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 60/88 (68%), Gaps = 2/88 (2%)
Query: 31 LTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAER 90
++S +LF+ GL+ T + L++AF+ FG + K+I DR TGRS+GFGFV++TS EEAE
Sbjct: 42 MSSSKLFIGGLAWATDENTLRDAFSSFGTVTEVKIILDRDTGRSRGFGFVNFTSPEEAEV 101
Query: 91 AREGMNAKYLDGWVIFVDPA--KSREAR 116
A + M+ + L G I VD A K+RE R
Sbjct: 102 ALQEMDGRELAGRQIRVDYATDKARETR 129
>gi|238011394|gb|ACR36732.1| unknown [Zea mays]
Length = 149
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L AF+ +G+++ SK+I DR T RS+GFGFV++++ E A EG
Sbjct: 9 RCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIEG 68
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN K LDG I V+ A+S
Sbjct: 69 MNGKELDGRNITVNEAQS 86
>gi|219888685|gb|ACL54717.1| unknown [Zea mays]
gi|414869098|tpg|DAA47655.1| TPA: glycine-rich protein1 [Zea mays]
Length = 144
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L AF+ +G+++ SK+I DR T RS+GFGFV++++ E A EG
Sbjct: 9 RCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIEG 68
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN K LDG I V+ A+S
Sbjct: 69 MNGKELDGRNITVNEAQS 86
>gi|195612516|gb|ACG28088.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|414869096|tpg|DAA47653.1| TPA: glycine-rich protein1 isoform 1 [Zea mays]
gi|414869097|tpg|DAA47654.1| TPA: glycine-rich protein1 isoform 2 [Zea mays]
Length = 155
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L AF+ +G+++ SK+I DR T RS+GFGFV++++ E A EG
Sbjct: 9 RCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIEG 68
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN K LDG I V+ A+S
Sbjct: 69 MNGKELDGRNITVNEAQS 86
>gi|195609654|gb|ACG26657.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195612080|gb|ACG27870.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195612572|gb|ACG28116.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 156
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L AF+ +G+++ SK+I DR T RS+GFGFV++++ E A EG
Sbjct: 9 RCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIEG 68
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN K LDG I V+ A+S
Sbjct: 69 MNGKELDGRNITVNEAQS 86
>gi|260787130|ref|XP_002588608.1| hypothetical protein BRAFLDRAFT_251348 [Branchiostoma floridae]
gi|229273773|gb|EEN44619.1| hypothetical protein BRAFLDRAFT_251348 [Branchiostoma floridae]
Length = 130
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 59/98 (60%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T++ L +AF+ FG + KVI D TGRS+GFGFV +++ EA+ AR+
Sbjct: 1 KLFVVGLSWGTSEASLCQAFSRFGTVTECKVIRDHWTGRSRGFGFVKFSAPSEADVARKD 60
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMG 132
M+ ++LDG I VD AK R Y + S +G
Sbjct: 61 MHFQHLDGRTIRVDYAKYRFGSAASNERYTCRNYSGLG 98
>gi|223942615|gb|ACN25391.1| unknown [Zea mays]
Length = 120
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L AF+ +G+++ SK+I DR T RS+GFGFV++++ E A EG
Sbjct: 9 RCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIEG 68
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN K LDG I V+ A+S
Sbjct: 69 MNGKELDGRNITVNEAQS 86
>gi|297819134|ref|XP_002877450.1| hypothetical protein ARALYDRAFT_905782 [Arabidopsis lyrata subsp.
lyrata]
gi|297323288|gb|EFH53709.1| hypothetical protein ARALYDRAFT_905782 [Arabidopsis lyrata subsp.
lyrata]
Length = 102
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 59/82 (71%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S +LFVS LS TTD+ L++ F+PFGQ+ +++I D T R KGFGF+++ S ++A +A
Sbjct: 6 SAQLFVSRLSAYTTDQSLRQLFSPFGQIKEARLIRDSETQRPKGFGFITFESEDDARKAL 65
Query: 93 EGMNAKYLDGWVIFVDPAKSRE 114
+ ++ K ++G +IFV+ AKS E
Sbjct: 66 KSLDGKIVEGRLIFVEVAKSSE 87
>gi|224130158|ref|XP_002328668.1| predicted protein [Populus trichocarpa]
gi|222838844|gb|EEE77195.1| predicted protein [Populus trichocarpa]
Length = 142
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 55/87 (63%)
Query: 30 TLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAE 89
++S ++F+ G+S T D LKEAF +G +V +I DR TGRS+GFGFV+YTS EEA
Sbjct: 36 CMSSSKIFIGGISFQTDDNGLKEAFDKYGNVVEGIIIMDRDTGRSRGFGFVTYTSSEEAS 95
Query: 90 RAREGMNAKYLDGWVIFVDPAKSREAR 116
A + M+ + L G + V+ A R R
Sbjct: 96 SAIQAMDGQDLHGRRVRVNYATERPQR 122
>gi|226499338|ref|NP_001149519.1| glycine-rich RNA-binding protein 8 [Zea mays]
gi|195627730|gb|ACG35695.1| glycine-rich RNA-binding protein 8 [Zea mays]
Length = 198
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 51/77 (66%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R F+ LS TTDE LK+AF+ FG L +KV+ D+ +GRS+GFGFV++ + E A EG
Sbjct: 8 RCFIGNLSWSTTDESLKDAFSKFGNLTEAKVVLDKFSGRSRGFGFVTFDEKQAMEDAIEG 67
Query: 95 MNAKYLDGWVIFVDPAK 111
MN LDG I VD A+
Sbjct: 68 MNGLDLDGRNITVDKAQ 84
>gi|255547195|ref|XP_002514655.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223546259|gb|EEF47761.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 267
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 61/94 (64%), Gaps = 3/94 (3%)
Query: 20 SQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGF 79
S +IR+ ++S ++FV G+S T D L+EAF +G+++ ++VI DR TGRS+GF F
Sbjct: 29 SMFQAIRF---MSSSKVFVGGISYQTDDTSLREAFGKYGEVIEARVIIDRETGRSRGFAF 85
Query: 80 VSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSR 113
V+YTS EEA A + ++ + L G + V+ A R
Sbjct: 86 VTYTSSEEASSAIQALDGQDLHGRRVRVNYANDR 119
>gi|257043450|gb|ACV33079.1| glycine-rich RNA-binding protein [Limonium bicolor]
Length = 140
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
Query: 8 RRALSSGSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVIT 67
++A+++G + S + SIR ++S +LF+ GLS T D+ LK+AFA FG + ++VI
Sbjct: 12 QKAVTAGPMSMTSMMNSIR---CMSSSKLFIGGLSWGTDDQSLKDAFASFGDVTEARVIM 68
Query: 68 DRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREA 115
DR TG+S+GFGFV Y E A A M+ + L+G I V A RE+
Sbjct: 69 DRNTGKSRGFGFVEYNDTESASSAMSSMDGQELNGRNIRVSYATERES 116
>gi|2366750|dbj|BAA22083.1| RNA binding protein [Nicotiana sylvestris]
gi|295393569|gb|ADG03640.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
gi|399931789|gb|AFP57444.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
gi|399931793|gb|AFP57446.1| RNA-binding glycine-rich protein [Nicotiana acuminata]
gi|399931795|gb|AFP57447.1| RNA-binding glycine-rich protein [Nicotiana alata]
gi|399931809|gb|AFP57454.1| RNA-binding glycine-rich protein [Nicotiana sylvestris]
Length = 144
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 65/104 (62%), Gaps = 4/104 (3%)
Query: 13 SGSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATG 72
S +S + S L ++R ST +LFV GLS T D+ L++AFA FG +V ++VI DR +G
Sbjct: 21 SATSPMPSMLDAVRCMST----KLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSG 76
Query: 73 RSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREAR 116
RS+GFGFV+++ E A A + M+ + L G I V A+ R R
Sbjct: 77 RSRGFGFVNFSDDECANEAIKAMDGQELQGRNIRVSIAQERAPR 120
>gi|2267593|gb|AAB63589.1| glycine-rich RNA-binding protein [Oryza sativa Indica Group]
Length = 165
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 55/79 (69%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T + L+ AF+ +G+++ SK+I DR TGRS+GFGFV+++S + A EG
Sbjct: 9 RCFVGGLAWATDNRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 95 MNAKYLDGWVIFVDPAKSR 113
M+ K LDG I V+ A+SR
Sbjct: 69 MSGKELDGRNITVNEAQSR 87
>gi|221048043|gb|ACL98129.1| hyperosmotic glycine rich protein [Epinephelus coioides]
Length = 175
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 49/76 (64%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LF+ GLS T +E L AF +G + VI D+ TGRS+GFGFV Y + ++A+ A EG
Sbjct: 6 KLFIGGLSFETNEESLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNCDDAKDALEG 65
Query: 95 MNAKYLDGWVIFVDPA 110
MN K LDG I VD A
Sbjct: 66 MNGKTLDGRAIRVDEA 81
>gi|209735756|gb|ACI68747.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 81
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS TT+E L EAFA +G + VI D+ TGRS+GFGFV Y + E+A+ A EG
Sbjct: 6 KLFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDALEG 65
Query: 95 MNAKYLDGWVIFV 107
MN K +D +IFV
Sbjct: 66 MNGKSVD--LIFV 76
>gi|238014210|gb|ACR38140.1| unknown [Zea mays]
gi|414873814|tpg|DAA52371.1| TPA: glycine-rich RNA-binding protein 8 isoform 1 [Zea mays]
gi|414873815|tpg|DAA52372.1| TPA: glycine-rich RNA-binding protein 8 isoform 2 [Zea mays]
gi|414873816|tpg|DAA52373.1| TPA: glycine-rich RNA-binding protein 8 isoform 3 [Zea mays]
Length = 205
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 51/77 (66%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R F+ LS TTDE LK+AF+ FG L +KV+ D+ +GRS+GFGFV++ + E A EG
Sbjct: 8 RCFIGNLSWSTTDESLKDAFSKFGNLTEAKVVLDKFSGRSRGFGFVTFDEKQAMEDAIEG 67
Query: 95 MNAKYLDGWVIFVDPAK 111
MN LDG I VD A+
Sbjct: 68 MNGLDLDGRNITVDKAQ 84
>gi|115456445|ref|NP_001051823.1| Os03g0836200 [Oryza sativa Japonica Group]
gi|40714682|gb|AAR88588.1| putative RNA binding protein [Oryza sativa Japonica Group]
gi|108711961|gb|ABF99756.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711962|gb|ABF99757.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711963|gb|ABF99758.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711964|gb|ABF99759.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113550294|dbj|BAF13737.1| Os03g0836200 [Oryza sativa Japonica Group]
gi|125546344|gb|EAY92483.1| hypothetical protein OsI_14220 [Oryza sativa Indica Group]
gi|125588547|gb|EAZ29211.1| hypothetical protein OsJ_13272 [Oryza sativa Japonica Group]
gi|215695067|dbj|BAG90258.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215715212|dbj|BAG94963.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215764998|dbj|BAG86695.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 205
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 50/77 (64%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R F+ LS TTDE LK+AF FG L +KV+ D+ +GRS+GFGFV++ + E A EG
Sbjct: 8 RCFIGNLSWSTTDESLKDAFGKFGNLTEAKVVFDKYSGRSRGFGFVTFDEKKAMEDAIEG 67
Query: 95 MNAKYLDGWVIFVDPAK 111
MN LDG I VD A+
Sbjct: 68 MNGLDLDGRAITVDKAQ 84
>gi|357150983|ref|XP_003575643.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 108
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 56/82 (68%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S +FVS LS TT+E+LK F+PFG + ++++ D TGR KGFGFV Y+S AE+A
Sbjct: 25 STEIFVSKLSFYTTEEELKNIFSPFGAIEEARLMRDNQTGRPKGFGFVKYSSQVAAEKAV 84
Query: 93 EGMNAKYLDGWVIFVDPAKSRE 114
+ M+ + + G +IFV+ AK R+
Sbjct: 85 KAMDGRIIRGRIIFVETAKERD 106
>gi|392578419|gb|EIW71547.1| hypothetical protein TREMEDRAFT_56482 [Tremella mesenterica DSM
1558]
Length = 223
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 60/85 (70%)
Query: 31 LTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAER 90
++ +++V LS TTD+ L++AF FGQ++ S V+ DR TGRS+GFGFV++++ EEAE
Sbjct: 1 MSGAKVYVGNLSWNTTDDTLRDAFMQFGQVLDSIVMKDRETGRSRGFGFVTFSTAEEAEI 60
Query: 91 AREGMNAKYLDGWVIFVDPAKSREA 115
+ + MN + LDG I V+ A ++ A
Sbjct: 61 SIQQMNEQPLDGRNIRVNMANAKPA 85
>gi|15822703|gb|AAL07518.1| RNA-binding protein precursor [Nicotiana tabacum]
Length = 277
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 57/84 (67%)
Query: 30 TLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAE 89
+++S +LFV GLS T + LKEAF+ +G ++ ++VI DR TGRS+GFGF+S+ S EEA
Sbjct: 36 SMSSSKLFVGGLSYGTDESSLKEAFSQYGDVIEARVIMDRDTGRSRGFGFISFPSSEEAA 95
Query: 90 RAREGMNAKYLDGWVIFVDPAKSR 113
A + M+ + L G I V+ A +
Sbjct: 96 SALQAMDGQDLHGRRIRVNYATEK 119
>gi|357445711|ref|XP_003593133.1| Glycine-rich RNA-binding protein [Medicago truncatula]
gi|355482181|gb|AES63384.1| Glycine-rich RNA-binding protein [Medicago truncatula]
Length = 491
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 52/77 (67%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R F+ GL+ T+D +LK+AF +G+LV +KV+ D+ +GRS+GFGFV++ E E A E
Sbjct: 230 RCFIGGLAWSTSDRRLKDAFEKYGKLVEAKVVVDKFSGRSRGFGFVTFDDKEAMEEAIEA 289
Query: 95 MNAKYLDGWVIFVDPAK 111
MN LDG I VD A+
Sbjct: 290 MNGIDLDGRTITVDKAQ 306
>gi|223974749|gb|ACN31562.1| unknown [Zea mays]
Length = 326
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 53/83 (63%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L AF+ +G+++ SK+I DR T RS+GFGFV++++ E A EG
Sbjct: 9 RCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIEG 68
Query: 95 MNAKYLDGWVIFVDPAKSREARP 117
MN K LDG I V+ A+ R P
Sbjct: 69 MNGKELDGRNITVNEAQFRRLTP 91
>gi|425781282|gb|EKV19258.1| hypothetical protein PDIG_04180 [Penicillium digitatum PHI26]
gi|425783364|gb|EKV21218.1| hypothetical protein PDIP_08850 [Penicillium digitatum Pd1]
Length = 162
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 53/83 (63%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T+D+ L+E F FG++ + V+ DRAT RS+GFGFV + + EA+ A
Sbjct: 3 KLFVHGLSWHTSDDTLREGFQQFGEIQEAIVVKDRATLRSRGFGFVRFATDAEADSALGA 62
Query: 95 MNAKYLDGWVIFVDPAKSREARP 117
MN + DG VI VD A R RP
Sbjct: 63 MNNQEFDGRVIRVDKAFDRPQRP 85
>gi|336371226|gb|EGN99565.1| hypothetical protein SERLA73DRAFT_159820 [Serpula lacrymans var.
lacrymans S7.3]
Length = 127
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 58/81 (71%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S +++V LS TTD+ L+EAF+ +GQ+V S V+ DR TGRS+GFGFV+++S +EAE A
Sbjct: 2 STKVYVGNLSWSTTDDTLREAFSEYGQVVDSIVMRDRETGRSRGFGFVTFSSEQEAEAAI 61
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
++ + LDG I V+ A +R
Sbjct: 62 NSLHEQDLDGRRIKVNLANAR 82
>gi|111162637|gb|ABH07505.1| glycine-rich RNA-binding protein [Nicotiana attenuata]
Length = 152
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 53/78 (67%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ TTD+ L +AF+ FG+++ SK+I DR TGRS+GFGFV++ + A EG
Sbjct: 7 RCFVGGLAWATTDQTLGDAFSQFGEILDSKIINDRETGRSRGFGFVTFKDEKAMRDAIEG 66
Query: 95 MNAKYLDGWVIFVDPAKS 112
M + LDG I V+ A+S
Sbjct: 67 MKGQDLDGRNITVNEAQS 84
>gi|624925|dbj|BAA05170.1| RNA-binding glycine rich protein [Nicotiana sylvestris]
gi|295393567|gb|ADG03639.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 259
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 57/84 (67%)
Query: 30 TLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAE 89
+++S +LFV GLS T + LKEAF+ G+++ ++VI DR TGRS+GFGFVS+TS EEA
Sbjct: 36 SMSSSKLFVGGLSWGTDETSLKEAFSQHGEVIEARVIMDRDTGRSRGFGFVSFTSTEEAA 95
Query: 90 RAREGMNAKYLDGWVIFVDPAKSR 113
A ++ + L G I V+ A +
Sbjct: 96 SALTALDGQDLHGRQIRVNYATEK 119
>gi|327301915|ref|XP_003235650.1| glycine-rich RNA-binding protein [Trichophyton rubrum CBS 118892]
gi|326463002|gb|EGD88455.1| glycine-rich RNA-binding protein [Trichophyton rubrum CBS 118892]
Length = 149
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 51/77 (66%)
Query: 34 PRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERARE 93
P+LF+ GL+ TTD+ L+E F+ FG + + V+ DR T RS+GFGFV ++S EA+ A
Sbjct: 4 PKLFIGGLAWHTTDDTLREGFSKFGTIEEAIVVKDRDTNRSRGFGFVRFSSDSEADAALN 63
Query: 94 GMNAKYLDGWVIFVDPA 110
MN + DG VI VD A
Sbjct: 64 AMNNQEFDGRVIRVDKA 80
>gi|18422781|ref|NP_568681.1| small subunit ribosomal protein S19 [Arabidopsis thaliana]
gi|21542438|sp|P39697.2|RT19_ARATH RecName: Full=40S ribosomal protein S19, mitochondrial; Flags:
Precursor
gi|15028321|gb|AAK76637.1| putative 40S ribosomal protein S19 [Arabidopsis thaliana]
gi|20259155|gb|AAM14293.1| putative 40S ribosomal protein S19 [Arabidopsis thaliana]
gi|332008115|gb|AED95498.1| small subunit ribosomal protein S19 [Arabidopsis thaliana]
Length = 212
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 69/112 (61%), Gaps = 5/112 (4%)
Query: 1 MAFASSFRRALSSGSSI-LKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQ 59
MAF + G ++ + S LGS+RY ST +L++ GLS T + LK+AF+ F
Sbjct: 1 MAFCTKLGGHWKQGVNVPVSSMLGSLRYMST----KLYIGGLSPGTDEHSLKDAFSSFNG 56
Query: 60 LVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAK 111
+ ++V+T++ TGRS+G+GFV++ S + A A MN + L+G+ I V+ AK
Sbjct: 57 VTEARVMTNKVTGRSRGYGFVNFISEDSANSAISAMNGQELNGFNISVNVAK 108
>gi|121596409|ref|YP_988305.1| RNP-1 like RNA-binding protein [Acidovorax sp. JS42]
gi|120608489|gb|ABM44229.1| RNP-1 like RNA-binding protein [Acidovorax sp. JS42]
Length = 149
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 53/84 (63%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V L D+ L++AF+ FG + +KV+ +R TGRSKGFGFV S EA+ A G
Sbjct: 4 KLYVGNLPYSVRDQDLEQAFSQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQEAING 63
Query: 95 MNAKYLDGWVIFVDPAKSREARPP 118
MN + L G I V+ A+ EARPP
Sbjct: 64 MNGQSLGGRSIVVNEARPMEARPP 87
>gi|457760|emb|CAA54951.1| ribosomal protein S19 [Arabidopsis thaliana]
gi|459422|emb|CAA54965.1| mitochondrial ribosomal protein S19, nuclear encoded [Arabidopsis
thaliana]
Length = 212
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 69/112 (61%), Gaps = 5/112 (4%)
Query: 1 MAFASSFRRALSSGSSI-LKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQ 59
MAF + G ++ + S LGS+RY ST +L++ GLS T + LK+AF+ F
Sbjct: 1 MAFCTKLGGHWKQGVNVPVSSMLGSLRYMST----KLYIGGLSPGTDEHSLKDAFSSFNG 56
Query: 60 LVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAK 111
+ ++V+T++ TGRS+G+GFV++ S + A A MN + L+G+ I V+ AK
Sbjct: 57 VTEARVMTNKVTGRSRGYGFVNFISEDSANSAISAMNGQELNGFNISVNVAK 108
>gi|375108277|ref|ZP_09754538.1| RRM domain-containing RNA-binding protein [Burkholderiales
bacterium JOSHI_001]
gi|374669008|gb|EHR73793.1| RRM domain-containing RNA-binding protein [Burkholderiales
bacterium JOSHI_001]
Length = 167
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 53/83 (63%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V L+ DE L+ AF+ FG + +KV+ DR TGRSKGFGFV + EA+ A G
Sbjct: 4 KLYVGNLAYSVRDESLQAAFSQFGTVTSAKVMMDRETGRSKGFGFVEMGTGAEAQAAING 63
Query: 95 MNAKYLDGWVIFVDPAKSREARP 117
MN + L+G + V+ A+ RE RP
Sbjct: 64 MNGQPLEGRAVVVNEARPREERP 86
>gi|406929710|gb|EKD65230.1| RNA-binding protein [uncultured bacterium]
Length = 95
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 56/85 (65%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S RLFV LS TTDE+L++ F+ G+++ +K I DR +G+ KGFGFV + EEA++A
Sbjct: 2 STRLFVGRLSYGTTDEQLEQHFSQAGKVISAKAIVDRYSGQGKGFGFVEMATAEEAQKAI 61
Query: 93 EGMNAKYLDGWVIFVDPAKSREARP 117
+ +N L+ I V+ A+ RE RP
Sbjct: 62 QQLNNSNLNDRSIVVNEARPREERP 86
>gi|168038795|ref|XP_001771885.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676836|gb|EDQ63314.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 157
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 69/110 (62%), Gaps = 3/110 (2%)
Query: 4 ASSFRRALSSGSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYS 63
A+ + L +G++ + + L + R+ ++S +LF+ GL+ T + L++AF FG +
Sbjct: 18 AAMMKSGLGAGAAAVPAMLMAQRF---MSSSKLFIGGLAWATDENTLRDAFGSFGTVTDV 74
Query: 64 KVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSR 113
K+I DR TGRS+GFGFV++TS +EAE A + M+ + L G I VD A +
Sbjct: 75 KIILDRDTGRSRGFGFVNFTSPQEAEVALQEMDGRELAGRQIRVDYATDK 124
>gi|242084350|ref|XP_002442600.1| hypothetical protein SORBIDRAFT_08g022740 [Sorghum bicolor]
gi|241943293|gb|EES16438.1| hypothetical protein SORBIDRAFT_08g022740 [Sorghum bicolor]
Length = 165
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L AF+ +G+++ SK+I DR T RS+GFGFV++++ E A EG
Sbjct: 9 RCFVGGLAWATDDNSLHSAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRSAIEG 68
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN K LDG I V+ A+S
Sbjct: 69 MNGKELDGRNITVNEAQS 86
>gi|304376936|gb|ACI70007.2| Cold-inducible RNA-binding protein [Salmo salar]
Length = 82
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS TT+E L EAFA +G + VI D+ TGRS+GFGFV Y + E+A+ A +G
Sbjct: 6 KLFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDALDG 65
Query: 95 MNAKYLDGWVIFV 107
MN K +D +IFV
Sbjct: 66 MNGKSVD-LMIFV 77
>gi|167520490|ref|XP_001744584.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776915|gb|EDQ90533.1| predicted protein [Monosiga brevicollis MX1]
Length = 86
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 52/83 (62%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L V GLSR T + +L F FGQL +I DR GRS+GFGFV++ S E+A+RARE +
Sbjct: 4 LGVFGLSRDTDERQLDSIFGDFGQLEKCIIIHDRQNGRSRGFGFVTFVSDEDAQRAREKL 63
Query: 96 NAKYLDGWVIFVDPAKSREARPP 118
N +DG + VD + ++ A P
Sbjct: 64 NGARIDGRNVRVDFSVTKRAHTP 86
>gi|222112647|ref|YP_002554911.1| rnp-1 like RNA-binding protein [Acidovorax ebreus TPSY]
gi|221732091|gb|ACM34911.1| RNP-1 like RNA-binding protein [Acidovorax ebreus TPSY]
Length = 155
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 53/84 (63%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V L D+ L++AF+ FG + +KV+ +R TGRSKGFGFV S EA+ A G
Sbjct: 4 KLYVGNLPYSVRDQDLEQAFSQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQEAING 63
Query: 95 MNAKYLDGWVIFVDPAKSREARPP 118
MN + L G I V+ A+ EARPP
Sbjct: 64 MNGQSLGGRSIVVNEARPMEARPP 87
>gi|116782406|gb|ABK22494.1| unknown [Picea sitchensis]
Length = 178
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 63/93 (67%), Gaps = 5/93 (5%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+VSGLS TT++ L+ AF+ FG LV + ++ DR T RS+GF F+ Y EEAE A +GM
Sbjct: 84 LYVSGLSYYTTEQSLRNAFSSFGNLVEATIVMDRVTKRSRGFAFLRYAYEEEAEAAIKGM 143
Query: 96 NAKYLDGWVIFVD----PAKSREARPPPP-PPY 123
+ K+LDG VIFV+ P++ R A P P PPY
Sbjct: 144 HGKFLDGRVIFVEYSKLPSELRGAPPKSPGPPY 176
>gi|315057077|ref|XP_003177913.1| hypothetical protein MGYG_01973 [Arthroderma gypseum CBS 118893]
gi|311339759|gb|EFQ98961.1| hypothetical protein MGYG_01973 [Arthroderma gypseum CBS 118893]
Length = 152
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 51/77 (66%)
Query: 34 PRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERARE 93
P+LF+ GL+ TTD+ L+E F+ FG + + V+ DR T RS+GFGFV ++S EA+ A
Sbjct: 4 PKLFIGGLAWHTTDDTLREGFSQFGTIEEAIVVKDRDTNRSRGFGFVRFSSEAEADAALN 63
Query: 94 GMNAKYLDGWVIFVDPA 110
MN + DG VI VD A
Sbjct: 64 AMNNQEFDGRVIRVDKA 80
>gi|296811816|ref|XP_002846246.1| glycine-rich RNA-binding protein [Arthroderma otae CBS 113480]
gi|238843634|gb|EEQ33296.1| glycine-rich RNA-binding protein [Arthroderma otae CBS 113480]
Length = 133
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 53/83 (63%)
Query: 31 LTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAER 90
+ P+LF+ GL+ TTD+ L++ F+ FG + + V+ DR T RS+GFGFV +++ EA+
Sbjct: 1 MAPPKLFIGGLAWHTTDDTLRDGFSKFGTIEEAIVVKDRDTNRSRGFGFVRFSNESEADA 60
Query: 91 AREGMNAKYLDGWVIFVDPAKSR 113
A MN + DG VI VD A R
Sbjct: 61 ALNAMNNQEFDGRVIRVDKATER 83
>gi|8809615|dbj|BAA97166.1| 40S ribosomal protein S19 [Arabidopsis thaliana]
Length = 244
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 78/140 (55%), Gaps = 9/140 (6%)
Query: 1 MAFASSFRRALSSGSSI-LKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQ 59
MAF + G ++ + S LGS+RY ST +L++ GLS T + LK+AF+ F
Sbjct: 33 MAFCTKLGGHWKQGVNVPVSSMLGSLRYMST----KLYIGGLSPGTDEHSLKDAFSSFNG 88
Query: 60 LVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREARPPP 119
+ ++V+T++ TGRS+G+GFV++ S + A A MN + L+G+ I V+ AK P
Sbjct: 89 VTEARVMTNKVTGRSRGYGFVNFISEDSANSAISAMNGQELNGFNISVNVAKD----WPS 144
Query: 120 PPPYPEQQPSEMGFRTNKTV 139
P ++ E + NK +
Sbjct: 145 LPLSLDESIEEAEKKENKMM 164
>gi|326474784|gb|EGD98793.1| glycine-rich RNA-binding protein [Trichophyton tonsurans CBS
112818]
Length = 149
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 51/77 (66%)
Query: 34 PRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERARE 93
P+LF+ GL+ TTD+ L+E F+ FG + + V+ DR T RS+GFGFV ++S EA+ A
Sbjct: 4 PKLFIGGLAWHTTDDTLREGFSKFGTIEEAIVVKDRDTNRSRGFGFVRFSSDSEADAALN 63
Query: 94 GMNAKYLDGWVIFVDPA 110
MN + DG VI VD A
Sbjct: 64 AMNNQEFDGRVIRVDKA 80
>gi|343459003|gb|AEM37660.1| cold inducible RNA binding protein [Epinephelus bruneus]
Length = 176
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 49/76 (64%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LF+ GLS T +E L AF +G + VI D+ TGRS+GFGFV Y + ++A+ A EG
Sbjct: 6 KLFIGGLSFETNEESLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNSDDAKDALEG 65
Query: 95 MNAKYLDGWVIFVDPA 110
MN K LDG I VD A
Sbjct: 66 MNGKTLDGRAIRVDEA 81
>gi|121705230|ref|XP_001270878.1| glycine-rich RNA-binding protein, putative [Aspergillus clavatus
NRRL 1]
gi|119399024|gb|EAW09452.1| glycine-rich RNA-binding protein, putative [Aspergillus clavatus
NRRL 1]
Length = 133
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 53/83 (63%)
Query: 34 PRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERARE 93
+LF+ GL+ TTD+ L++ F FGQ+ + V+ DR T RS+GFGFV ++S +A++A +
Sbjct: 2 SKLFIGGLAWHTTDDALRQGFEQFGQVEEAIVVKDRDTNRSRGFGFVRFSSDSDADKAMD 61
Query: 94 GMNAKYLDGWVIFVDPAKSREAR 116
MN + DG I VD A R R
Sbjct: 62 AMNNQEFDGRTIRVDKASERAPR 84
>gi|21388662|dbj|BAC00787.1| glycine-rich RNA-binding protein [Physcomitrella patens]
Length = 155
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 56/80 (70%)
Query: 31 LTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAER 90
++ +LFV GL+ TTD+ +KEAF+ FG++ K+I DR TGRS+GFGFV++ + ++AE
Sbjct: 39 MSGSKLFVGGLAWGTTDDNIKEAFSAFGEVTEVKIICDRDTGRSRGFGFVTFATDQDAEA 98
Query: 91 AREGMNAKYLDGWVIFVDPA 110
A + ++ + L G I V+ A
Sbjct: 99 ALQALDGRDLAGRTIRVNYA 118
>gi|15822705|gb|AAL07519.1| RNA-binding protein precursor [Solanum tuberosum]
Length = 339
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 57/84 (67%)
Query: 30 TLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAE 89
+++S +LFV GLS T + LKE F+ +G+++ ++VI DR TGRS+GFGF+S+ S EEA
Sbjct: 36 SMSSSKLFVGGLSYGTDESSLKETFSQYGEVIEARVILDRETGRSRGFGFISFPSSEEAT 95
Query: 90 RAREGMNAKYLDGWVIFVDPAKSR 113
A + M+ + L G I V+ A +
Sbjct: 96 SAMQAMDGQDLHGRRIKVNYATEK 119
>gi|302679630|ref|XP_003029497.1| hypothetical protein SCHCODRAFT_85789 [Schizophyllum commune H4-8]
gi|300103187|gb|EFI94594.1| hypothetical protein SCHCODRAFT_85789 [Schizophyllum commune H4-8]
Length = 174
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 57/81 (70%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S +++V LS TTD+ L++AF+ FGQ++ S V+ DR TGRS+GFGFV+++S EAE A
Sbjct: 2 STKVYVGNLSWNTTDDTLRQAFSNFGQVLDSIVMRDRETGRSRGFGFVTFSSSGEAESAI 61
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
+N + LDG I V+ A +R
Sbjct: 62 SSLNEQELDGRRIKVNLANAR 82
>gi|91786529|ref|YP_547481.1| RNA recognition motif-containing protein [Polaromonas sp. JS666]
gi|91695754|gb|ABE42583.1| RNA-binding region RNP-1 (RNA recognition motif) [Polaromonas sp.
JS666]
Length = 134
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 52/84 (61%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V L DE L+++F FG + +KV+ +R TGRSKGFGFV S EA+ A G
Sbjct: 4 KLYVGNLPYTVRDEDLQQSFGAFGSITSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIAG 63
Query: 95 MNAKYLDGWVIFVDPAKSREARPP 118
MN + L G I V+ A+ EARPP
Sbjct: 64 MNGQSLGGRSITVNEARPMEARPP 87
>gi|398803602|ref|ZP_10562623.1| RRM domain-containing RNA-binding protein [Polaromonas sp. CF318]
gi|398096229|gb|EJL86556.1| RRM domain-containing RNA-binding protein [Polaromonas sp. CF318]
Length = 133
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 52/84 (61%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V L DE L+++F FG + +KV+ +R TGRSKGFGFV S EA+ A G
Sbjct: 4 KLYVGNLPYTVRDEDLQQSFGAFGSITSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIAG 63
Query: 95 MNAKYLDGWVIFVDPAKSREARPP 118
MN + L G I V+ A+ EARPP
Sbjct: 64 MNGQSLGGRSITVNEARPMEARPP 87
>gi|399931811|gb|AFP57455.1| RNA-binding glycine-rich protein [Nicotiana undulata]
Length = 144
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 64/104 (61%), Gaps = 4/104 (3%)
Query: 13 SGSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATG 72
S +S + S ++R ST +LFV GLS T D+ L++AFA FG +V ++VI DR +G
Sbjct: 21 SATSPMPSMFDAVRCMST----KLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSG 76
Query: 73 RSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREAR 116
RS+GFGFV+++ E A A + M+ + L G I V A+ R R
Sbjct: 77 RSRGFGFVNFSDDESANEAIKAMDGQELQGRNIRVSIAQERAPR 120
>gi|297839301|ref|XP_002887532.1| hypothetical protein ARALYDRAFT_476560 [Arabidopsis lyrata subsp.
lyrata]
gi|297333373|gb|EFH63791.1| hypothetical protein ARALYDRAFT_476560 [Arabidopsis lyrata subsp.
lyrata]
Length = 292
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 70/113 (61%), Gaps = 7/113 (6%)
Query: 1 MAFASSFRRALSSGSSIL---KSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPF 57
MAF S R S SS + S L SIR ++S ++FV G+S T + L+EAF+ +
Sbjct: 1 MAFLSKVGRIFSQTSSHVTASSSMLQSIR---CMSSSKIFVGGISYSTDEFGLREAFSKY 57
Query: 58 GQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPA 110
G++V +K+I DR TGRS+GF FV++TS EEA A + ++ + L G I V+ A
Sbjct: 58 GEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQ-LDGQDLHGRRIRVNYA 109
>gi|168016725|ref|XP_001760899.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687908|gb|EDQ74288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 155
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 56/80 (70%)
Query: 31 LTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAER 90
++ +LFV GL+ TTD+ +KEAF+ FG++ K+I DR TGRS+GFGFV++ + ++AE
Sbjct: 39 MSGSKLFVGGLAWGTTDDNIKEAFSAFGEVTEVKIICDRDTGRSRGFGFVTFATDQDAEA 98
Query: 91 AREGMNAKYLDGWVIFVDPA 110
A + ++ + L G I V+ A
Sbjct: 99 ALQALDGRDLAGRTIRVNYA 118
>gi|15221187|ref|NP_177563.1| glycine-rich RNA-binding protein 5 [Arabidopsis thaliana]
gi|12324900|gb|AAG52402.1|AC020579_4 putative RNA-binding protein; 37609-36098 [Arabidopsis thaliana]
gi|25083154|gb|AAN72048.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|30023780|gb|AAP13423.1| At1g74230 [Arabidopsis thaliana]
gi|332197447|gb|AEE35568.1| glycine-rich RNA-binding protein 5 [Arabidopsis thaliana]
Length = 289
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 70/113 (61%), Gaps = 7/113 (6%)
Query: 1 MAFASSFRRALSSGSSIL---KSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPF 57
MAF S R S SS + S L SIR ++S ++FV G+S T + L+EAF+ +
Sbjct: 1 MAFLSKVGRLFSQTSSHVTASSSMLQSIR---CMSSSKIFVGGISYSTDEFGLREAFSKY 57
Query: 58 GQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPA 110
G++V +K+I DR TGRS+GF FV++TS EEA A + ++ + L G I V+ A
Sbjct: 58 GEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQ-LDGQDLHGRRIRVNYA 109
>gi|297620951|ref|YP_003709088.1| RNA-binding protein [Waddlia chondrophila WSU 86-1044]
gi|297376252|gb|ADI38082.1| RNA-binding protein [Waddlia chondrophila WSU 86-1044]
gi|337293226|emb|CCB91217.1| putative RNA-binding protein rbpA [Waddlia chondrophila 2032/99]
Length = 92
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 55/84 (65%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V LS ++++ K+ FA FG+++ +K+ITDR TG+SKGFGFV + E AE A +
Sbjct: 2 KLYVGNLSYRVSEDQFKDYFASFGEVLSAKIITDRFTGQSKGFGFVEFADKEAAEEAIKE 61
Query: 95 MNAKYLDGWVIFVDPAKSREARPP 118
+N +G I V+ AK E RPP
Sbjct: 62 LNGSNFEGRSIVVNEAKPMEDRPP 85
>gi|469071|dbj|BAA03742.1| RNA-binding glycine-rich protein-1b [Nicotiana sylvestris]
gi|295393565|gb|ADG03638.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 148
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 52/78 (66%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
FV GL+ TTD L +AF +G+++ SK+I DR TGRS+GFGFV++ + A EGM
Sbjct: 8 CFVGGLAWATTDRTLADAFGTYGEVLDSKIINDRETGRSRGFGFVTFKDEKCMRDAIEGM 67
Query: 96 NAKYLDGWVIFVDPAKSR 113
N + LDG I V+ A++R
Sbjct: 68 NGQELDGRSITVNEAQAR 85
>gi|409044525|gb|EKM54006.1| hypothetical protein PHACADRAFT_257571 [Phanerochaete carnosa
HHB-10118-sp]
Length = 155
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 56/81 (69%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S +++V LS TTD+ L+ AF+ FGQ++ S V+ DR TGRS+GFGFV+++S EA+ A
Sbjct: 2 SAKVYVGNLSWNTTDDSLRTAFSQFGQILDSIVMRDRDTGRSRGFGFVTFSSANEAQTAI 61
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
+N + LDG I V+ A +R
Sbjct: 62 TSLNEQELDGRRIRVNLANAR 82
>gi|194693774|gb|ACF80971.1| unknown [Zea mays]
Length = 133
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 52/78 (66%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L AF+ +G+++ SK+I DR T RS+GFGFV++++ + A EG
Sbjct: 9 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 68
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN K LDG I V+ A+S
Sbjct: 69 MNGKELDGRNITVNEAQS 86
>gi|225433489|ref|XP_002264895.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial [Vitis
vinifera]
gi|147833478|emb|CAN75185.1| hypothetical protein VITISV_001912 [Vitis vinifera]
gi|298205231|emb|CBI17290.3| unnamed protein product [Vitis vinifera]
Length = 152
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 71/122 (58%), Gaps = 12/122 (9%)
Query: 1 MAFASSFRRAL---------SSGSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLK 51
MAF + F L S G + + L SIR ++S +LF+ GLS T D+ LK
Sbjct: 1 MAFCNRFGNLLRQSISQNSASKGQGSMGALLNSIR---CMSSAKLFIGGLSYGTDDQSLK 57
Query: 52 EAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAK 111
+AF+ FG +V ++VITDR TGRS+GFGFV++TS + A A M+ + L+G I V A
Sbjct: 58 DAFSSFGDVVEARVITDRDTGRSRGFGFVNFTSDDSASSALSAMDGQELNGRNIRVSYAN 117
Query: 112 SR 113
R
Sbjct: 118 ER 119
>gi|2331131|gb|AAB66884.1| glycine-rich protein [Oryza sativa Japonica Group]
Length = 162
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 52/77 (67%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L+ AF+ +G+++ SK+I DR TGRS GFGF++++S + A EG
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSLGFGFITFSSEQSMRDAIEG 68
Query: 95 MNAKYLDGWVIFVDPAK 111
MN K LDG I V+ A+
Sbjct: 69 MNGKELDGRNITVNEAQ 85
>gi|297793663|ref|XP_002864716.1| hypothetical protein ARALYDRAFT_358310 [Arabidopsis lyrata subsp.
lyrata]
gi|297310551|gb|EFH40975.1| hypothetical protein ARALYDRAFT_358310 [Arabidopsis lyrata subsp.
lyrata]
Length = 327
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 57/84 (67%)
Query: 30 TLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAE 89
++S +LF+ G++ ++ L+EAF +G++V ++VI DR TGRS+GFGFV++TS E A
Sbjct: 36 CMSSSKLFIGGMAYSMDEDSLREAFTKYGEVVETRVILDRETGRSRGFGFVTFTSSEAAS 95
Query: 90 RAREGMNAKYLDGWVIFVDPAKSR 113
A + ++ + L G V+ V+ A R
Sbjct: 96 SAIQALDGRDLHGRVVKVNYANDR 119
>gi|388583201|gb|EIM23503.1| hypothetical protein WALSEDRAFT_67167 [Wallemia sebi CBS 633.66]
Length = 89
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 52/81 (64%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
+ ++++S LS T DE L AF+PFGQ+ V+ DR TGRS+GFGFV+Y + EA A
Sbjct: 4 NSKIYISNLSWSTNDEDLARAFSPFGQISDYIVMKDRQTGRSRGFGFVTYANDREASSAL 63
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
E MN LDG I V+ A +R
Sbjct: 64 ESMNEVELDGRRIRVNYAHAR 84
>gi|255565552|ref|XP_002523766.1| dc50, putative [Ricinus communis]
gi|223536978|gb|EEF38615.1| dc50, putative [Ricinus communis]
Length = 210
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 50/77 (64%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R F+ GLS T+D LKEAF FG L+ +KV+ D+ +GRS+GFGFV++ + E A E
Sbjct: 8 RCFIGGLSWSTSDRGLKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIEE 67
Query: 95 MNAKYLDGWVIFVDPAK 111
MN LDG I VD A+
Sbjct: 68 MNGMDLDGRTITVDKAQ 84
>gi|1346181|sp|P49311.1|GRP2_SINAL RecName: Full=Glycine-rich RNA-binding protein GRP2A
gi|496237|gb|AAA59213.1| homology with RNA-binding proteins in meristematic tissue [Sinapis
alba]
Length = 169
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 52/77 (67%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T + L+ AF+ FG+LV SK+I DR TGRS+GFGFV++ + + A EG
Sbjct: 9 RCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEG 68
Query: 95 MNAKYLDGWVIFVDPAK 111
MN + LDG I V+ A+
Sbjct: 69 MNGQDLDGRSITVNEAQ 85
>gi|71000080|ref|XP_754757.1| glycine-rich RNA-binding protein [Aspergillus fumigatus Af293]
gi|66852394|gb|EAL92719.1| glycine-rich RNA-binding protein, putative [Aspergillus fumigatus
Af293]
gi|159127765|gb|EDP52880.1| glycine-rich RNA-binding protein, putative [Aspergillus fumigatus
A1163]
Length = 118
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 53/82 (64%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LF+ GL+ TTD+ L++ F P+G + + V+ DR T RS+GFGFV ++S EA+ A +
Sbjct: 3 KLFIGGLAWHTTDDALRQGFEPYGVVEEAIVVKDRDTNRSRGFGFVRFSSDTEADAAMDA 62
Query: 95 MNAKYLDGWVIFVDPAKSREAR 116
MN + DG I VD A R AR
Sbjct: 63 MNNQEFDGRTIRVDKASERPAR 84
>gi|357473273|ref|XP_003606921.1| Glycine-rich RNA binding protein [Medicago truncatula]
gi|355507976|gb|AES89118.1| Glycine-rich RNA binding protein [Medicago truncatula]
Length = 164
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 53/78 (67%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T E L++AF+ +G+++ SK+I DR TGRS+GFGFV++ + A EG
Sbjct: 9 RCFVGGLAWATDSEALEKAFSQYGEIIDSKIINDRETGRSRGFGFVTFADEKSMRDAIEG 68
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN + +DG I V+ A+S
Sbjct: 69 MNGQDMDGRNITVNEAQS 86
>gi|119492333|ref|XP_001263582.1| glycine-rich RNA-binding protein, putative [Neosartorya fischeri
NRRL 181]
gi|119411742|gb|EAW21685.1| glycine-rich RNA-binding protein, putative [Neosartorya fischeri
NRRL 181]
Length = 118
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 53/82 (64%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LF+ GL+ TTD+ L++ F P+G + + V+ DR T RS+GFGFV ++S EA+ A +
Sbjct: 3 KLFIGGLAWHTTDDALRQGFEPYGVVEEAIVVKDRDTNRSRGFGFVRFSSDTEADAAMDA 62
Query: 95 MNAKYLDGWVIFVDPAKSREAR 116
MN + DG I VD A R AR
Sbjct: 63 MNNQEFDGRTIRVDKASERPAR 84
>gi|198282085|ref|NP_001105572.1| glycine-rich RNA binding protein [Zea mays]
gi|2668742|gb|AAB88616.1| glycine-rich RNA binding protein [Zea mays]
gi|194692162|gb|ACF80165.1| unknown [Zea mays]
gi|195623052|gb|ACG33356.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 145
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 52/78 (66%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L AF+ +G+++ SK+I DR T RS+GFGFV++++ + A EG
Sbjct: 9 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 68
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN K LDG I V+ A+S
Sbjct: 69 MNGKELDGRNITVNEAQS 86
>gi|195618802|gb|ACG31231.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195625478|gb|ACG34569.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 146
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 52/78 (66%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L AF+ +G+++ SK+I DR T RS+GFGFV++++ + A EG
Sbjct: 9 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 68
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN K LDG I V+ A+S
Sbjct: 69 MNGKELDGRNITVNEAQS 86
>gi|20257695|gb|AAM16013.1| glycine-rich RNA binding protein [Zea mays]
Length = 149
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 52/78 (66%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L AF+ +G+++ SK+I DR T RS+GFGFV++++ + A EG
Sbjct: 13 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 72
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN K LDG I V+ A+S
Sbjct: 73 MNGKELDGRNITVNEAQS 90
>gi|388566786|ref|ZP_10153228.1| RNA recognition motif-containing protein [Hydrogenophaga sp. PBC]
gi|388265964|gb|EIK91512.1| RNA recognition motif-containing protein [Hydrogenophaga sp. PBC]
Length = 133
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 53/84 (63%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V L DE L++AF+ FG + +KV+ +R TGRSKGFGFV S EA+ A +G
Sbjct: 4 KLYVGNLPYTVRDEDLQQAFSAFGAVNSAKVMMERETGRSKGFGFVEMGSDSEAQSAIQG 63
Query: 95 MNAKYLDGWVIFVDPAKSREARPP 118
MN + L G + V+ A+ E RPP
Sbjct: 64 MNGQSLGGRSLVVNEARPMEPRPP 87
>gi|334339635|ref|YP_004544615.1| RNP-1 like RNA-binding protein [Desulfotomaculum ruminis DSM 2154]
gi|334090989|gb|AEG59329.1| RNP-1 like RNA-binding protein [Desulfotomaculum ruminis DSM 2154]
Length = 85
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V L T E L+EAF+ +G+++ S+VITDR TGRS+GFGFV E+AE+ +
Sbjct: 4 LYVGNLPWATKAEDLQEAFSQYGEVISSRVITDRETGRSRGFGFVEVND-EDAEKMVAAL 62
Query: 96 NAKYLDGWVIFVDPAKSREA 115
N L+G VI V+ AKSREA
Sbjct: 63 NGTDLNGRVITVNEAKSREA 82
>gi|20257687|gb|AAM16009.1| glycine-rich RNA binding protein [Zea mays]
gi|20257713|gb|AAM16022.1| glycine-rich RNA binding protein [Zea mays]
Length = 149
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 52/78 (66%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L AF+ +G+++ SK+I DR T RS+GFGFV++++ + A EG
Sbjct: 12 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 71
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN K LDG I V+ A+S
Sbjct: 72 MNGKELDGRNITVNEAQS 89
>gi|162463657|ref|NP_001105707.1| glycine-rich protein1 [Zea mays]
gi|22293|emb|CAA43431.1| glycine-rich protein [Zea mays]
Length = 155
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 51/78 (65%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L AF+ +G+++ SK+I DR T RS+GFGFV++++ E EG
Sbjct: 9 RCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEERMRNRIEG 68
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN K LDG I V+ A+S
Sbjct: 69 MNGKELDGRNITVNEAQS 86
>gi|20257715|gb|AAM16023.1| glycine-rich RNA binding protein [Zea mays]
gi|20257721|gb|AAM16026.1| glycine-rich RNA binding protein [Zea mays]
Length = 148
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 52/78 (66%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L AF+ +G+++ SK+I DR T RS+GFGFV++++ + A EG
Sbjct: 12 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 71
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN K LDG I V+ A+S
Sbjct: 72 MNGKELDGRNITVNEAQS 89
>gi|20257711|gb|AAM16021.1| glycine-rich RNA binding protein [Zea mays]
Length = 150
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 52/78 (66%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L AF+ +G+++ SK+I DR T RS+GFGFV++++ + A EG
Sbjct: 14 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 73
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN K LDG I V+ A+S
Sbjct: 74 MNGKELDGRNITVNEAQS 91
>gi|121604834|ref|YP_982163.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans CJ2]
gi|120593803|gb|ABM37242.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans CJ2]
Length = 132
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 52/84 (61%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V L DE L+++F FG + +KV+ +R TGRSKGFGFV S EA+ A G
Sbjct: 4 KLYVGNLPYTVRDEDLQQSFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIAG 63
Query: 95 MNAKYLDGWVIFVDPAKSREARPP 118
MN + L G I V+ A+ EARPP
Sbjct: 64 MNGQSLGGRSITVNEARPMEARPP 87
>gi|20257689|gb|AAM16010.1| glycine-rich RNA binding protein [Zea mays]
Length = 147
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 52/78 (66%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L AF+ +G+++ SK+I DR T RS+GFGFV++++ + A EG
Sbjct: 11 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 70
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN K LDG I V+ A+S
Sbjct: 71 MNGKELDGRNITVNEAQS 88
>gi|116781810|gb|ABK22248.1| unknown [Picea sitchensis]
Length = 215
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 50/77 (64%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GLS T+D L++AF FG L+ +KV+ DR TGRS+GFGFV++ + E A +
Sbjct: 8 RCFVGGLSWSTSDRTLEDAFHKFGHLIEAKVVVDRDTGRSRGFGFVTFDDKKSMEDAIDS 67
Query: 95 MNAKYLDGWVIFVDPAK 111
M+ LDG I VD A+
Sbjct: 68 MHGMSLDGRSITVDRAR 84
>gi|167383625|ref|XP_001736605.1| cold-inducible RNA-binding protein [Entamoeba dispar SAW760]
gi|165900936|gb|EDR27150.1| cold-inducible RNA-binding protein, putative [Entamoeba dispar
SAW760]
Length = 138
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 53/80 (66%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
RL++ L+ TDE L+ AF FG + KV+TDR + RSKGFGFV++ E+A++A E
Sbjct: 3 RLYIGSLAYSVTDESLRAAFEKFGTVTDCKVVTDRESQRSKGFGFVTFEKDEDAKKAIEE 62
Query: 95 MNAKYLDGWVIFVDPAKSRE 114
MN + L+G I VD +K RE
Sbjct: 63 MNEQELEGRRIKVDVSKPRE 82
>gi|20257673|gb|AAM16002.1| glycine-rich RNA binding protein [Zea mays]
Length = 139
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 52/78 (66%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L AF+ +G+++ SK+I DR T RS+GFGFV++++ + A EG
Sbjct: 3 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 62
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN K LDG I V+ A+S
Sbjct: 63 MNGKELDGRNITVNEAQS 80
>gi|388512303|gb|AFK44213.1| unknown [Medicago truncatula]
Length = 121
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Query: 25 IRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTS 84
+ Y ++S +LF+ GLS D+ L++AF +G +V ++VITDR TGRS+GFGF+++TS
Sbjct: 2 LNYLRHMSSSKLFIGGLSYNVDDQSLRDAFTTYGDVVEARVITDRETGRSRGFGFINFTS 61
Query: 85 IEEAERAREGMNAKYLDGWVIFVDPAKSREA 115
E A A M+ + L+G I V A R+A
Sbjct: 62 EESATSALS-MDGQDLNGRNIRVSYANDRQA 91
>gi|351725105|ref|NP_001235801.1| uncharacterized protein LOC100305467 [Glycine max]
gi|255625591|gb|ACU13140.1| unknown [Glycine max]
Length = 156
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 52/77 (67%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T + L++AF+ +G +V SK+I DR TGRS+GFGFV++ S + A EG
Sbjct: 9 RCFVGGLAWATDNYDLEKAFSQYGDVVESKIINDRETGRSRGFGFVTFASEDSMRDAIEG 68
Query: 95 MNAKYLDGWVIFVDPAK 111
MN + LDG I V+ A+
Sbjct: 69 MNGQNLDGRNITVNEAQ 85
>gi|30692254|ref|NP_849523.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
gi|332661645|gb|AEE87045.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
Length = 126
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 50/77 (64%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T DE L+ F+ FG ++ SK+I DR +GRS+GFGFV++ + A E
Sbjct: 7 RCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEE 66
Query: 95 MNAKYLDGWVIFVDPAK 111
MN K LDG VI V+ A+
Sbjct: 67 MNGKELDGRVITVNEAQ 83
>gi|15235002|ref|NP_195637.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
gi|544425|sp|Q03251.1|GRP8_ARATH RecName: Full=Glycine-rich RNA-binding protein 8; AltName:
Full=Protein CCR1
gi|16305|emb|CAA78712.1| glycine rich protein [Arabidopsis thaliana]
gi|166658|gb|AAA20201.1| ORF [Arabidopsis thaliana]
gi|166839|gb|AAA32854.1| RNA-binding protein [Arabidopsis thaliana]
gi|4914438|emb|CAB43641.1| glycine-rich protein (clone AtGRP8) [Arabidopsis thaliana]
gi|7270909|emb|CAB80589.1| glycine-rich protein (clone AtGRP8) [Arabidopsis thaliana]
gi|222423067|dbj|BAH19515.1| AT4G39260 [Arabidopsis thaliana]
gi|332661644|gb|AEE87044.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
Length = 169
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 50/77 (64%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T DE L+ F+ FG ++ SK+I DR +GRS+GFGFV++ + A E
Sbjct: 7 RCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEE 66
Query: 95 MNAKYLDGWVIFVDPAK 111
MN K LDG VI V+ A+
Sbjct: 67 MNGKELDGRVITVNEAQ 83
>gi|388511641|gb|AFK43882.1| unknown [Lotus japonicus]
Length = 211
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 53/83 (63%)
Query: 29 STLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEA 88
S + R F+ GL+ T+D KLK+AF FG+L +KV+ D+ +GRS+GFGFV++ +
Sbjct: 2 SDVDEYRCFIGGLAWSTSDRKLKDAFEKFGKLTEAKVVVDKFSGRSRGFGFVTFDDKKAM 61
Query: 89 ERAREGMNAKYLDGWVIFVDPAK 111
+ A + MN LDG I VD A+
Sbjct: 62 DEAIDAMNGMDLDGRTITVDKAQ 84
>gi|390602556|gb|EIN11949.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 161
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 56/81 (69%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S +++V LS TTDE L+ AF+ +GQ++ S V+ DR TGRS+GFGFV+++S EA+ A
Sbjct: 2 SAKVYVGNLSWNTTDESLRAAFSHYGQILDSIVMRDRDTGRSRGFGFVTFSSSAEADNAI 61
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
+N + LDG I V+ A +R
Sbjct: 62 ASLNEQDLDGRRIRVNLANAR 82
>gi|20257693|gb|AAM16012.1| glycine-rich RNA binding protein [Zea mays]
Length = 153
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 51/78 (65%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L AF+ +G+++ SK+I DR T RS+GFGFV+++ + A EG
Sbjct: 16 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXDAMRSAIEG 75
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN K LDG I V+ A+S
Sbjct: 76 MNGKELDGRNITVNEAQS 93
>gi|15239505|ref|NP_200911.1| glycine-rich RNA-binding protein 3 [Arabidopsis thaliana]
gi|9759450|dbj|BAB10366.1| unnamed protein product [Arabidopsis thaliana]
gi|16974556|gb|AAL31194.1| AT5g61030/maf19_30 [Arabidopsis thaliana]
gi|21928059|gb|AAM78058.1| AT5g61030/maf19_30 [Arabidopsis thaliana]
gi|225879144|dbj|BAH30642.1| hypothetical protein [Arabidopsis thaliana]
gi|332010031|gb|AED97414.1| glycine-rich RNA-binding protein 3 [Arabidopsis thaliana]
Length = 309
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 57/84 (67%)
Query: 30 TLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAE 89
++S +LF+ G++ ++ L+EAF +G++V ++VI DR TGRS+GFGFV++TS E A
Sbjct: 36 CMSSSKLFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAAS 95
Query: 90 RAREGMNAKYLDGWVIFVDPAKSR 113
A + ++ + L G V+ V+ A R
Sbjct: 96 SAIQALDGRDLHGRVVKVNYANDR 119
>gi|399931803|gb|AFP57451.1| RNA-binding glycine-rich protein [Nicotiana plumbaginifolia]
Length = 144
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 64/104 (61%), Gaps = 4/104 (3%)
Query: 13 SGSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATG 72
S +S + S L ++R ST +LFV GLS T D+ L++AFA FG +V ++VI DR +G
Sbjct: 21 SATSPMPSMLDAVRCMST----KLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSG 76
Query: 73 RSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREAR 116
R +GFGFV+++ E A A + M+ + L G I V A+ R R
Sbjct: 77 RPRGFGFVNFSDDECANEAIKAMDGQELQGRNIRVSIAQERAPR 120
>gi|121606987|ref|YP_984316.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans CJ2]
gi|120595956|gb|ABM39395.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans CJ2]
Length = 152
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 52/84 (61%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V L DE L+++F FG + +KV+ +R TGRSKGFGFV S EA+ A G
Sbjct: 4 KLYVGNLPYSVRDEDLQQSFGQFGAVTSAKVMMERDTGRSKGFGFVEMASDAEAQAAING 63
Query: 95 MNAKYLDGWVIFVDPAKSREARPP 118
MN + L G + V+ A+ EARPP
Sbjct: 64 MNGQPLGGRSVVVNEARPMEARPP 87
>gi|383760540|ref|YP_005439526.1| RNP-1 like RNA-binding protein, Glycine-rich [Rubrivivax
gelatinosus IL144]
gi|381381210|dbj|BAL98027.1| RNP-1 like RNA-binding protein, Glycine-rich [Rubrivivax
gelatinosus IL144]
Length = 161
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 52/80 (65%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V L+ D+ L++AFA FG + +KV+ DR TGRSKGFGFV S EA+ A G
Sbjct: 4 KLYVGNLAYSVRDDSLQQAFAQFGTVTSAKVMMDRETGRSKGFGFVEMGSDAEAQAAING 63
Query: 95 MNAKYLDGWVIFVDPAKSRE 114
MN + L+G I V+ A+ RE
Sbjct: 64 MNGQPLEGRAIVVNEARPRE 83
>gi|225463887|ref|XP_002264022.1| PREDICTED: uncharacterized protein LOC100256416 isoform 1 [Vitis
vinifera]
gi|359493015|ref|XP_003634493.1| PREDICTED: uncharacterized protein LOC100256416 isoform 2 [Vitis
vinifera]
Length = 207
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 50/77 (64%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R F+ GLS T+D LKEAF FG LV +KV+ D+ +GRS+GFGFVS+ + E A +
Sbjct: 8 RCFIGGLSWSTSDRSLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVSFDDKQAMEDAIKE 67
Query: 95 MNAKYLDGWVIFVDPAK 111
M+ LDG I VD A+
Sbjct: 68 MHGMDLDGRSITVDKAQ 84
>gi|357473251|ref|XP_003606910.1| Glycine-rich RNA binding protein [Medicago truncatula]
gi|355507965|gb|AES89107.1| Glycine-rich RNA binding protein [Medicago truncatula]
Length = 161
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 53/77 (68%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T +E L++AF+ +G++V SK+I DR TGRS+GFGFV++ + + A E
Sbjct: 7 RCFVGGLAWATDNEALEKAFSQYGEIVDSKIINDRETGRSRGFGFVTFANEKSMNDAIEA 66
Query: 95 MNAKYLDGWVIFVDPAK 111
MN + LDG I V+ A+
Sbjct: 67 MNGQDLDGRNITVNQAQ 83
>gi|296088109|emb|CBI35498.3| unnamed protein product [Vitis vinifera]
Length = 153
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 50/77 (64%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R F+ GLS T+D LKEAF FG LV +KV+ D+ +GRS+GFGFVS+ + E A +
Sbjct: 8 RCFIGGLSWSTSDRSLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVSFDDKQAMEDAIKE 67
Query: 95 MNAKYLDGWVIFVDPAK 111
M+ LDG I VD A+
Sbjct: 68 MHGMDLDGRSITVDKAQ 84
>gi|212722336|ref|NP_001132163.1| uncharacterized protein LOC100193584 [Zea mays]
gi|194693616|gb|ACF80892.1| unknown [Zea mays]
Length = 234
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 52/73 (71%)
Query: 40 GLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKY 99
GL+ T++E L+ AFA +G+++ SKVITDR TGRS+GFGFV+++S A E MN K
Sbjct: 89 GLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKE 148
Query: 100 LDGWVIFVDPAKS 112
LDG I V+ A+S
Sbjct: 149 LDGRNITVNQAQS 161
>gi|67483728|ref|XP_657084.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56474323|gb|EAL51698.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|449705266|gb|EMD45349.1| RNA recognition motif domain containing protein [Entamoeba
histolytica KU27]
Length = 136
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 53/80 (66%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
RL++ L+ TDE LK AF FG + KV+TDR + RSKGFGFV++ E+A++A E
Sbjct: 3 RLYIGSLAYSVTDESLKAAFEKFGTVTDCKVVTDRDSQRSKGFGFVTFEKDEDAKKAIEE 62
Query: 95 MNAKYLDGWVIFVDPAKSRE 114
MN + L+G I VD ++ RE
Sbjct: 63 MNEQELEGRRIKVDVSRPRE 82
>gi|398802241|ref|ZP_10561457.1| RRM domain-containing RNA-binding protein [Polaromonas sp. CF318]
gi|398100710|gb|EJL90943.1| RRM domain-containing RNA-binding protein [Polaromonas sp. CF318]
Length = 148
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 52/84 (61%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V L DE L+++F FG + +KV+ +R TGRSKGFGFV S EA+ A G
Sbjct: 4 KLYVGNLPYSVRDEDLQQSFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAING 63
Query: 95 MNAKYLDGWVIFVDPAKSREARPP 118
MN + L G + V+ A+ EARPP
Sbjct: 64 MNGQPLGGRSVVVNEARPMEARPP 87
>gi|255565709|ref|XP_002523844.1| Cold-inducible RNA-binding protein, putative [Ricinus communis]
gi|223536932|gb|EEF38570.1| Cold-inducible RNA-binding protein, putative [Ricinus communis]
Length = 121
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 53/82 (64%)
Query: 32 TSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERA 91
+S RLFV G+S +T E L EAF+ FG++V +I D+A R KG+ +V++ + EA++A
Sbjct: 32 SSSRLFVKGISFSSTTESLTEAFSKFGEIVEVNIIKDKAMDRPKGYAYVTFATENEAKKA 91
Query: 92 REGMNAKYLDGWVIFVDPAKSR 113
MN K +DG +FVD SR
Sbjct: 92 LTEMNGKVIDGRPVFVDNVSSR 113
>gi|91790716|ref|YP_551668.1| RNA recognition motif-containing protein [Polaromonas sp. JS666]
gi|91699941|gb|ABE46770.1| RNA-binding region RNP-1 (RNA recognition motif) [Polaromonas sp.
JS666]
Length = 151
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 52/84 (61%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V L DE L+++F FG + +KV+ +R TGRSKGFGFV S EA+ A G
Sbjct: 4 KLYVGNLPYSVRDEDLQQSFGQFGSVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAING 63
Query: 95 MNAKYLDGWVIFVDPAKSREARPP 118
MN + L G + V+ A+ EARPP
Sbjct: 64 MNGQPLGGRSVVVNEARPMEARPP 87
>gi|398810917|ref|ZP_10569726.1| RRM domain-containing RNA-binding protein [Variovorax sp. CF313]
gi|398081873|gb|EJL72641.1| RRM domain-containing RNA-binding protein [Variovorax sp. CF313]
Length = 134
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 51/84 (60%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V L+ D L++AF FG +V +KV+ +R TGRSKGFGFV S EA A E
Sbjct: 4 KLYVGNLAYSVRDNDLEQAFGEFGAIVSAKVMMERDTGRSKGFGFVEMGSDAEALAAIEA 63
Query: 95 MNAKYLDGWVIFVDPAKSREARPP 118
MN L G + V+ A+ EARPP
Sbjct: 64 MNGHSLQGRALTVNEARPMEARPP 87
>gi|319791037|ref|YP_004152677.1| rnp-1 like RNA-binding protein [Variovorax paradoxus EPS]
gi|315593500|gb|ADU34566.1| RNP-1 like RNA-binding protein [Variovorax paradoxus EPS]
Length = 138
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 51/84 (60%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V L+ D L++AF FG +V +KV+ +R TGRSKGFGFV S EA A E
Sbjct: 4 KLYVGNLAYSVRDNDLEQAFGEFGAIVSAKVMMERDTGRSKGFGFVEMGSDAEALAAIEA 63
Query: 95 MNAKYLDGWVIFVDPAKSREARPP 118
MN L G + V+ A+ EARPP
Sbjct: 64 MNGHSLQGRALTVNEARPMEARPP 87
>gi|221220658|gb|ACM08990.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|304376965|gb|ACI70202.2| Cold-inducible RNA-binding protein [Salmo salar]
Length = 161
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 50/76 (65%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS TT++ L EAF+ +G + VI DR TGR +GFGFV Y + E+A+ A +
Sbjct: 6 KLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDAMDA 65
Query: 95 MNAKYLDGWVIFVDPA 110
MN + LDG I V+ A
Sbjct: 66 MNGQSLDGRTIRVNEA 81
>gi|198285593|gb|ACH85335.1| hyperosmotic glycine rich protein-like [Salmo salar]
gi|221219546|gb|ACM08434.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 160
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 50/76 (65%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS TT++ L EAF+ +G + VI DR TGR +GFGFV Y + E+A+ A +
Sbjct: 6 KLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDAMDA 65
Query: 95 MNAKYLDGWVIFVDPA 110
MN + LDG I V+ A
Sbjct: 66 MNGQSLDGRTIRVNEA 81
>gi|20257675|gb|AAM16003.1| glycine-rich RNA binding protein [Zea mays]
Length = 156
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 52/78 (66%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L AF+ +G+++ SK+I DR T RS+GFGFV++++ + A EG
Sbjct: 19 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 78
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN K LDG I V+ A+S
Sbjct: 79 MNGKELDGRNITVNEAQS 96
>gi|20257669|gb|AAM16000.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 52/78 (66%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L AF+ +G+++ SK+I DR T RS+GFGFV++++ + A EG
Sbjct: 19 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 78
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN K LDG I V+ A+S
Sbjct: 79 MNGKELDGRNITVNEAQS 96
>gi|30681492|ref|NP_850017.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
gi|330252116|gb|AEC07210.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
Length = 159
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 51/77 (66%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L+ AFA +G ++ SK+I DR TGRS+GFGFV++ + + A EG
Sbjct: 9 RCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEG 68
Query: 95 MNAKYLDGWVIFVDPAK 111
MN + LDG I V+ A+
Sbjct: 69 MNGQDLDGRSITVNEAQ 85
>gi|21553354|gb|AAM62447.1| glycine-rich RNA binding protein 7 [Arabidopsis thaliana]
Length = 175
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 51/77 (66%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L+ AFA +G ++ SK+I DR TGRS+GFGFV++ + + A EG
Sbjct: 9 RCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEG 68
Query: 95 MNAKYLDGWVIFVDPAK 111
MN + LDG I V+ A+
Sbjct: 69 MNGQDLDGRSITVNEAQ 85
>gi|227204227|dbj|BAH56965.1| AT2G21660 [Arabidopsis thaliana]
Length = 153
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 51/77 (66%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L+ AFA +G ++ SK+I DR TGRS+GFGFV++ + + A EG
Sbjct: 9 RCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEG 68
Query: 95 MNAKYLDGWVIFVDPAK 111
MN + LDG I V+ A+
Sbjct: 69 MNGQDLDGRSITVNEAQ 85
>gi|15226605|ref|NP_179760.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
gi|544424|sp|Q03250.1|GRP7_ARATH RecName: Full=Glycine-rich RNA-binding protein 7
gi|16226372|gb|AAL16149.1|AF428381_1 At2g22292/F2G1.7_ [Arabidopsis thaliana]
gi|16301|emb|CAA78711.1| glycine rich protein [Arabidopsis thaliana]
gi|166837|gb|AAA32853.1| RNA-binding protein [Arabidopsis thaliana]
gi|4567224|gb|AAD23639.1| glycine-rich RNA binding protein 7 [Arabidopsis thaliana]
gi|15810032|gb|AAL06943.1| At2g21660/F2G1.7 [Arabidopsis thaliana]
gi|330252115|gb|AEC07209.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
Length = 176
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 51/77 (66%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L+ AFA +G ++ SK+I DR TGRS+GFGFV++ + + A EG
Sbjct: 9 RCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEG 68
Query: 95 MNAKYLDGWVIFVDPAK 111
MN + LDG I V+ A+
Sbjct: 69 MNGQDLDGRSITVNEAQ 85
>gi|20257691|gb|AAM16011.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 52/78 (66%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L AF+ +G+++ SK+I DR T RS+GFGFV++++ + A EG
Sbjct: 18 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 77
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN K LDG I V+ A+S
Sbjct: 78 MNGKELDGRNITVNEAQS 95
>gi|20257667|gb|AAM15999.1| glycine-rich RNA binding protein [Zea mays]
gi|20257671|gb|AAM16001.1| glycine-rich RNA binding protein [Zea mays]
gi|20257677|gb|AAM16004.1| glycine-rich RNA binding protein [Zea mays]
gi|20257685|gb|AAM16008.1| glycine-rich RNA binding protein [Zea mays]
gi|20257703|gb|AAM16017.1| glycine-rich RNA binding protein [Zea mays]
gi|20257717|gb|AAM16024.1| glycine-rich RNA binding protein [Zea mays]
gi|20257719|gb|AAM16025.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 52/78 (66%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L AF+ +G+++ SK+I DR T RS+GFGFV++++ + A EG
Sbjct: 18 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 77
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN K LDG I V+ A+S
Sbjct: 78 MNGKELDGRNITVNEAQS 95
>gi|339626955|ref|YP_004718598.1| RNP-1 like RNA-binding protein [Sulfobacillus acidophilus TPY]
gi|379008663|ref|YP_005258114.1| RNP-1 like RNA-binding protein [Sulfobacillus acidophilus DSM
10332]
gi|339284744|gb|AEJ38855.1| RNP-1 like RNA-binding protein [Sulfobacillus acidophilus TPY]
gi|361054925|gb|AEW06442.1| RNP-1 like RNA-binding protein [Sulfobacillus acidophilus DSM
10332]
Length = 85
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S L+V L+ TT+E+L +AFA Q++ +++ITDR TGRS+GFGFV ++AE+A
Sbjct: 2 SKTLYVGNLAWSTTEEELAQAFAQHAQVISARIITDRETGRSRGFGFVEVAD-QDAEQAV 60
Query: 93 EGMNAKYLDGWVIFVDPAKSREAR 116
E MN L G I V+ A+ R++R
Sbjct: 61 EAMNGTQLGGRDIIVNEARPRQSR 84
>gi|399931801|gb|AFP57450.1| RNA-binding glycine-rich protein [Nicotiana goodspeedii]
Length = 144
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 55/84 (65%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S +LFV GLS T D+ L++A A FG +V ++VI DR +GRS+GFGFV+++ E A A
Sbjct: 37 STKLFVGGLSWGTDDQSLRDALATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAI 96
Query: 93 EGMNAKYLDGWVIFVDPAKSREAR 116
+ M+ + L G I V+ A+ R R
Sbjct: 97 KAMDGQELQGRNIRVNIAQERAPR 120
>gi|328850756|gb|EGF99917.1| hypothetical protein MELLADRAFT_118186 [Melampsora larici-populina
98AG31]
Length = 667
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 53/83 (63%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
LFV GLS D+ LK+ F FG+++ ++VIT+R T RSKGFG+V + S E+A +A E M
Sbjct: 403 LFVGGLSWNVDDDWLKKEFEKFGEVISARVITERGTERSKGFGYVDFASPEDARKAVEAM 462
Query: 96 NAKYLDGWVIFVDPAKSREARPP 118
+DG I VD + + RPP
Sbjct: 463 AGTEIDGRTINVDFSAPKPERPP 485
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
LF+ L T + + EAF+ +G + ++ TD T R KGFG+V + + E A A +
Sbjct: 503 LFIGNLPFSATQDSVYEAFSEYGDINSVRLPTDPETERIKGFGYVEFATQEAATAA---V 559
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N DG I++D R+AR
Sbjct: 560 NVGRGDG--IYID---QRQAR 575
>gi|20257683|gb|AAM16007.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 52/78 (66%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L AF+ +G+++ SK+I DR T RS+GFGFV++++ + A EG
Sbjct: 18 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 77
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN K LDG I V+ A+S
Sbjct: 78 MNGKELDGRNITVNEAQS 95
>gi|209734900|gb|ACI68319.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|303657347|gb|ADM15872.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 114
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 50/76 (65%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS TT++ L EAF+ +G + VI DR TGR +GFGFV Y + E+A+ A +
Sbjct: 6 KLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDAMDA 65
Query: 95 MNAKYLDGWVIFVDPA 110
MN + LDG I V+ A
Sbjct: 66 MNGQSLDGRTIRVNEA 81
>gi|213513270|ref|NP_001133190.1| hyperosmotic glycine rich protein [Salmo salar]
gi|197632401|gb|ACH70924.1| hyperosmotic glycine rich protein [Salmo salar]
Length = 126
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 50/76 (65%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS TT++ L EAF+ +G + VI DR TGR +GFGFV Y + E+A+ A +
Sbjct: 6 KLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDAMDA 65
Query: 95 MNAKYLDGWVIFVDPA 110
MN + LDG I V+ A
Sbjct: 66 MNGQSLDGRTIRVNEA 81
>gi|20257697|gb|AAM16014.1| glycine-rich RNA binding protein [Zea mays]
Length = 148
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 50/78 (64%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L AF+ +G+++ SK+I DR T RS+GFGFV+++ A EG
Sbjct: 12 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXXXXRSAIEG 71
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN K LDG I V+ A+S
Sbjct: 72 MNGKELDGRNITVNEAQS 89
>gi|407033602|gb|EKE36900.1| RNA recognition motif (RRM, RBD, or RNP domain) containing protein
[Entamoeba nuttalli P19]
Length = 136
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 53/80 (66%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
RL++ L+ TDE LK AF FG + KV+TDR + RSKGFGFV++ E+A++A E
Sbjct: 3 RLYIGSLAYSVTDESLKAAFEKFGTVTDCKVVTDRDSQRSKGFGFVTFEKDEDAKKAIEE 62
Query: 95 MNAKYLDGWVIFVDPAKSRE 114
MN + L+G I VD ++ RE
Sbjct: 63 MNEQELEGRRIKVDVSRPRE 82
>gi|171056877|ref|YP_001789226.1| RNP-1 like RNA-binding protein [Leptothrix cholodnii SP-6]
gi|170774322|gb|ACB32461.1| RNP-1 like RNA-binding protein [Leptothrix cholodnii SP-6]
Length = 157
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 52/83 (62%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V L+ DE L EAF+ FG + +KV+ DR TGRSKGFGFV S EA+ A G
Sbjct: 4 KLYVGNLAYSVRDEDLNEAFSQFGAVNSAKVMMDRETGRSKGFGFVEMGSDPEAQAAING 63
Query: 95 MNAKYLDGWVIFVDPAKSREARP 117
+N + + G I V+ A+ RE +P
Sbjct: 64 LNGQAIGGRAIVVNEARPREDKP 86
>gi|361067297|gb|AEW07960.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
Length = 84
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%)
Query: 47 DEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIF 106
++ L EAF+ FG++V K++ DR + RSKGFGFV Y S +AERA+ MN K L G +IF
Sbjct: 1 EKALTEAFSRFGEVVEVKIVMDRVSQRSKGFGFVQYASEADAERAKAEMNGKVLSGRIIF 60
Query: 107 VDPAKSR 113
VD K++
Sbjct: 61 VDDVKAK 67
>gi|449486948|ref|XP_004157450.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 173
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 56/83 (67%)
Query: 31 LTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAER 90
++S ++FV GLS T D++L EAF +G++V ++VI DR TGRS+GFGFV++ + E+A
Sbjct: 37 MSSSKVFVGGLSYGTDDQRLTEAFTKYGEVVEARVIMDRDTGRSRGFGFVTFGASEDASS 96
Query: 91 AREGMNAKYLDGWVIFVDPAKSR 113
A + ++ + LDG I A R
Sbjct: 97 AIQALDGQDLDGRRIRCSYATDR 119
>gi|449439323|ref|XP_004137435.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 171
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 56/83 (67%)
Query: 31 LTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAER 90
++S ++FV GLS T D++L EAF +G++V ++VI DR TGRS+GFGFV++ + E+A
Sbjct: 37 MSSSKVFVGGLSYGTDDQRLTEAFTKYGEVVEARVIMDRDTGRSRGFGFVTFGASEDASS 96
Query: 91 AREGMNAKYLDGWVIFVDPAKSR 113
A + ++ + LDG I A R
Sbjct: 97 AIQALDGQDLDGRRIRCSYATDR 119
>gi|32564504|ref|NP_495123.2| Protein TIAR-1, isoform e [Caenorhabditis elegans]
gi|373219013|emb|CCD65018.1| Protein TIAR-1, isoform e [Caenorhabditis elegans]
Length = 305
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 55/97 (56%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS ++KL+EAF PFG + +KVI D T +SKG+GFVSY EEAERA E
Sbjct: 33 HVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQ 92
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEM 131
MN ++L I + A + P Y E+ E+
Sbjct: 93 MNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEI 129
>gi|393245114|gb|EJD52625.1| hypothetical protein AURDEDRAFT_111257 [Auricularia delicata
TFB-10046 SS5]
Length = 103
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 56/81 (69%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
+ +++V LS TTDE L+ AF FGQ++ S V+ DR TGRS+GFGFV++ S +EA+ A
Sbjct: 2 ASKVYVGNLSWNTTDETLRSAFQDFGQILDSIVMRDRDTGRSRGFGFVTFGSPQEADSAI 61
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
+ +N + LDG I V+ A +R
Sbjct: 62 QALNDQELDGRRIKVNLANAR 82
>gi|255568010|ref|XP_002524982.1| RNA binding protein, putative [Ricinus communis]
gi|223535726|gb|EEF37389.1| RNA binding protein, putative [Ricinus communis]
Length = 371
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 6/100 (6%)
Query: 24 SIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYT 83
S++ + S GLS T+++ L+ AF FG+LV K+I D+ + RSKG+ F+ YT
Sbjct: 269 SVQLDKNFESENKDYEGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYT 328
Query: 84 SIEEAERAREGMNAKYLDGWVIFVDPAKSREARPPPPPPY 123
+ E A A + MN K ++GW+I VD AK+ PP Y
Sbjct: 329 TEEAANAALKEMNGKIINGWMIVVDVAKT------SPPRY 362
>gi|293332827|ref|NP_001169335.1| uncharacterized protein LOC100383202 [Zea mays]
gi|224028769|gb|ACN33460.1| unknown [Zea mays]
gi|413918115|gb|AFW58047.1| hypothetical protein ZEAMMB73_457780 [Zea mays]
Length = 714
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
L++ L D+ L F+ FG +V +KVI DR TG+SKG+GFV Y+ + EA A
Sbjct: 421 NLYIGYLPPTMDDDGLVSLFSQFGDIVMAKVIKDRNTGQSKGYGFVKYSDVSEANAAIAA 480
Query: 95 MNAKYLDGWVIFVDPAKSREARPPP----PPPYPEQQPSEMGFRTNKTVG 140
MN +L+G VI V A + +P P PP YP P+ G+ + +G
Sbjct: 481 MNGHHLEGRVIAVRVA-GKPPQPAPAVSAPPSYPPTDPTSGGYSSQSYMG 529
>gi|32564506|ref|NP_871980.1| Protein TIAR-1, isoform f [Caenorhabditis elegans]
gi|373219014|emb|CCD65019.1| Protein TIAR-1, isoform f [Caenorhabditis elegans]
Length = 295
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 55/97 (56%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS ++KL+EAF PFG + +KVI D T +SKG+GFVSY EEAERA E
Sbjct: 23 HVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQ 82
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEM 131
MN ++L I + A + P Y E+ E+
Sbjct: 83 MNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEI 119
>gi|17531965|ref|NP_495121.1| Protein TIAR-1, isoform a [Caenorhabditis elegans]
gi|373219010|emb|CCD65015.1| Protein TIAR-1, isoform a [Caenorhabditis elegans]
Length = 408
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 55/97 (56%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS ++KL+EAF PFG + +KVI D T +SKG+GFVSY EEAERA E
Sbjct: 136 HVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQ 195
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEM 131
MN ++L I + A + P Y E+ E+
Sbjct: 196 MNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEI 232
>gi|297825019|ref|XP_002880392.1| hypothetical protein ARALYDRAFT_481034 [Arabidopsis lyrata subsp.
lyrata]
gi|297326231|gb|EFH56651.1| hypothetical protein ARALYDRAFT_481034 [Arabidopsis lyrata subsp.
lyrata]
Length = 159
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 51/77 (66%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L+ AF+ +G +V SK+I DR TGRS+GFGFV++ + + A EG
Sbjct: 9 RCFVGGLAWATDDRALETAFSQYGDVVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEG 68
Query: 95 MNAKYLDGWVIFVDPAK 111
MN + LDG I V+ A+
Sbjct: 69 MNGQELDGRSITVNEAQ 85
>gi|20257681|gb|AAM16006.1| glycine-rich RNA binding protein [Zea mays]
Length = 148
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 50/78 (64%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L AF+ +G+++ SK+I DR T RS+GFGFV+++ A EG
Sbjct: 12 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXXAMRSAIEG 71
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN K LDG I V+ A+S
Sbjct: 72 MNGKELDGRNITVNEAQS 89
>gi|242046266|ref|XP_002461004.1| hypothetical protein SORBIDRAFT_02g039025 [Sorghum bicolor]
gi|241924381|gb|EER97525.1| hypothetical protein SORBIDRAFT_02g039025 [Sorghum bicolor]
Length = 83
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 55/79 (69%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S +FVS LS TT+E+ K+ F+ FG + ++++ D+ TGR KGFGFV Y+S EAE+A
Sbjct: 5 STEIFVSRLSFYTTEEEFKDVFSSFGTVEEARLMRDQQTGRIKGFGFVKYSSQAEAEKAV 64
Query: 93 EGMNAKYLDGWVIFVDPAK 111
+ M+ + L G +IFV+ AK
Sbjct: 65 KAMDGRILRGRLIFVEMAK 83
>gi|194337130|ref|YP_002018924.1| RNP-1 like RNA-binding protein [Pelodictyon phaeoclathratiforme
BU-1]
gi|194309607|gb|ACF44307.1| RNP-1 like RNA-binding protein [Pelodictyon phaeoclathratiforme
BU-1]
Length = 90
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 54/88 (61%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ L+ T++ L++AF+ FGQ+ + +I D+ +GRSKGFGFV + EA A E M
Sbjct: 3 IYIGNLAYTVTEDDLRDAFSEFGQVESASIINDKFSGRSKGFGFVDMPNESEAREAIESM 62
Query: 96 NAKYLDGWVIFVDPAKSREARPPPPPPY 123
N K L+G I V+ AK RE RP Y
Sbjct: 63 NEKDLNGRTIKVNEAKPREERPARRDRY 90
>gi|17531963|ref|NP_495120.1| Protein TIAR-1, isoform b [Caenorhabditis elegans]
gi|373219011|emb|CCD65016.1| Protein TIAR-1, isoform b [Caenorhabditis elegans]
Length = 376
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 55/97 (56%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS ++KL+EAF PFG + +KVI D T +SKG+GFVSY EEAERA E
Sbjct: 104 HVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQ 163
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEM 131
MN ++L I + A + P Y E+ E+
Sbjct: 164 MNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEI 200
>gi|338722679|ref|XP_001915947.2| PREDICTED: LOW QUALITY PROTEIN: poly(A) binding protein,
cytoplasmic 4-like [Equus caballus]
Length = 397
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ D++L+E F+ +G+ V KV+TD +TG+SKGFGFVS+ S E A++A E M
Sbjct: 192 IYIKNFGDDMDDKRLEEVFSKYGKTVSVKVMTD-STGKSKGFGFVSFYSHEAAQKAVEEM 250
Query: 96 NAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSE 130
N K ++G ++FV A+ + R EQQ E
Sbjct: 251 NGKDINGQLLFVGRAQKKAERQAELKQMFEQQKQE 285
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L++ L DEKL+ F+ FG + KV+ + GRSKGFG + ++S EEA RA
Sbjct: 294 KLYIKNLDDTIDDEKLRREFSSFGSISRVKVM--KEEGRSKGFGLICFSSPEEATRAMTE 351
Query: 95 MNAKYL 100
MN + L
Sbjct: 352 MNGRIL 357
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L E F+ FG+++ SKV++D S+G+ FV + + A+RA E M
Sbjct: 100 VFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQG--SRGYAFVHFQNQMAADRAIEEM 157
Query: 96 NAKYLDGWVIFVDPAKSREARPPP 119
N L +FV K+R+ R
Sbjct: 158 NGALLKDCRLFVGRFKNRQDREAE 181
>gi|115529229|dbj|BAF34340.1| putative glycine-rich RNA-binding protein [Dianthus caryophyllus]
Length = 163
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 49/77 (63%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GLS T D L EAF FG++ SK+I DR TGRS+GFGFV++ + + A +
Sbjct: 7 RCFVGGLSWGTDDRSLAEAFNKFGEVTDSKIINDRETGRSRGFGFVTFANEQSMRDAIDE 66
Query: 95 MNAKYLDGWVIFVDPAK 111
MN K LDG I V+ A+
Sbjct: 67 MNGKELDGRSITVNEAQ 83
>gi|7446337|pir||T15542 hypothetical protein C18A3.5 - Caenorhabditis elegans
Length = 448
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 55/97 (56%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS ++KL+EAF PFG + +KVI D T +SKG+GFVSY EEAERA E
Sbjct: 176 HVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQ 235
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEM 131
MN ++L I + A + P Y E+ E+
Sbjct: 236 MNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEI 272
>gi|357457429|ref|XP_003598995.1| 28 kDa ribonucleoprotein [Medicago truncatula]
gi|355488043|gb|AES69246.1| 28 kDa ribonucleoprotein [Medicago truncatula]
Length = 447
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 61/90 (67%)
Query: 24 SIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYT 83
+IR S+ + +LFV G+S T ++ L +AF+ +GQ++ +++I DR +GRSKGFGFV+Y
Sbjct: 34 AIRCFSSTPNTKLFVGGISYNTDEQSLSDAFSKYGQVLDARIIMDRESGRSKGFGFVTYN 93
Query: 84 SIEEAERAREGMNAKYLDGWVIFVDPAKSR 113
++EEA A + ++ + L G + V+ A R
Sbjct: 94 TVEEASSAIQALDGQDLYGRRVGVNFANER 123
>gi|449438165|ref|XP_004136860.1| PREDICTED: uncharacterized protein LOC101215898 [Cucumis sativus]
gi|449478936|ref|XP_004155458.1| PREDICTED: uncharacterized protein LOC101227324 [Cucumis sativus]
Length = 211
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 50/77 (64%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R F+ GLS T+D LKEAF FG LV +KV+ D+ +GRS+GFGFV++ + + A +
Sbjct: 8 RCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKA 67
Query: 95 MNAKYLDGWVIFVDPAK 111
MN LDG I VD A+
Sbjct: 68 MNGMDLDGRSITVDKAQ 84
>gi|291231285|ref|XP_002735593.1| PREDICTED: TIA-1 related protein-like [Saccoglossus kowalevskii]
Length = 409
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
Query: 30 TLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAE 89
T +FV LS LK AFAPFGQ+ ++V+ D T +SKG+GFVS+ + +AE
Sbjct: 98 TSNHHHVFVGDLSSEVDTPDLKAAFAPFGQISDARVVKDLQTNKSKGYGFVSFLNKVDAE 157
Query: 90 RAREGMNAKYLDGWVIFVDPAKSREARPPPPPPYPE 125
A +GMN ++L G I + A R PPPP PE
Sbjct: 158 NAIQGMNGQWLSGRAIRTNWA----TRKPPPPRQPE 189
>gi|209976406|gb|ACJ04160.1| putative glycine-rich RNA-binding protein [Chorispora bungeana]
Length = 175
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 51/77 (66%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L+ AF+ +G +V SK+I DR TGRS+GFGFV++ + + A EG
Sbjct: 9 RCFVGGLAWATDDRALETAFSQYGDVVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEG 68
Query: 95 MNAKYLDGWVIFVDPAK 111
MN + LDG I V+ A+
Sbjct: 69 MNGQDLDGRSITVNEAQ 85
>gi|239813338|ref|YP_002942248.1| RNP-1 like RNA-binding protein [Variovorax paradoxus S110]
gi|239799915|gb|ACS16982.1| RNP-1 like RNA-binding protein [Variovorax paradoxus S110]
Length = 137
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 51/84 (60%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V L+ D L++AF FG +V +KV+ +R TGRSKGFGFV + EA A E
Sbjct: 4 KLYVGNLAYSVRDNDLEQAFGEFGSIVSAKVMMERDTGRSKGFGFVEMGTDAEALAAVEA 63
Query: 95 MNAKYLDGWVIFVDPAKSREARPP 118
MN L G + V+ A+ EARPP
Sbjct: 64 MNGHSLQGRALTVNEARPMEARPP 87
>gi|351724633|ref|NP_001238088.1| uncharacterized protein LOC100527061 [Glycine max]
gi|255631468|gb|ACU16101.1| unknown [Glycine max]
Length = 113
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 61/89 (68%), Gaps = 4/89 (4%)
Query: 20 SQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGF 79
SQL +R T+TS ++FV GL+ TT+E+L +AF+ +G ++ + +I ++A RSKGFG+
Sbjct: 23 SQLLFLR---TMTS-KVFVKGLAFSTTEEELAKAFSQYGSVLKANIILNKAKNRSKGFGY 78
Query: 80 VSYTSIEEAERAREGMNAKYLDGWVIFVD 108
V + EEA +A+ MN K L G VI+VD
Sbjct: 79 VIFAKEEEACKAQIDMNGKILHGRVIYVD 107
>gi|301310455|ref|ZP_07216394.1| glycine-rich RNA-binding protein 8 (Protein CCR1) [Bacteroides sp.
20_3]
gi|423336704|ref|ZP_17314451.1| hypothetical protein HMPREF1059_00403 [Parabacteroides distasonis
CL09T03C24]
gi|300832029|gb|EFK62660.1| glycine-rich RNA-binding protein 8 (Protein CCR1) [Bacteroides sp.
20_3]
gi|409240584|gb|EKN33362.1| hypothetical protein HMPREF1059_00403 [Parabacteroides distasonis
CL09T03C24]
Length = 123
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 53/81 (65%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L++S LS +DE L++ FA +G++ +KVI DR TGRS+GFGFV + E A++A E +
Sbjct: 3 LYISNLSYNISDEDLRQLFADYGEITSAKVIMDRETGRSRGFGFVELSDDELAKKAIEEL 62
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N DG VI + A+ RE R
Sbjct: 63 NQASYDGKVINITEARPREDR 83
>gi|159163576|pdb|1X5S|A Chain A, Solution Structure Of Rrm Domain In A18 Hnrnp
Length = 102
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 14 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 73
Query: 95 MNAKYLDGWVIFVDPA-KSREARPPP 119
MN K +DG I VD A KS + R P
Sbjct: 74 MNGKSVDGRQIRVDQAGKSSDNRSGP 99
>gi|20257707|gb|AAM16019.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 51/78 (65%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L AF+ +G+++ SK+I DR T RS+GFGFV+++ + A EG
Sbjct: 18 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXEDAMRSAIEG 77
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN K LDG I V+ A+S
Sbjct: 78 MNGKELDGRNITVNEAQS 95
>gi|121595278|ref|YP_987174.1| RNP-1 like RNA-binding protein [Acidovorax sp. JS42]
gi|222111562|ref|YP_002553826.1| rnp-1 like RNA-binding protein [Acidovorax ebreus TPSY]
gi|120607358|gb|ABM43098.1| RNP-1 like RNA-binding protein [Acidovorax sp. JS42]
gi|221731006|gb|ACM33826.1| RNP-1 like RNA-binding protein [Acidovorax ebreus TPSY]
Length = 102
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 53/85 (62%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
+ RL+V L+ DE L + F+ FG + +KV+ +R TGRSKGFGFV S EA+ A
Sbjct: 2 NNRLYVGNLAYSVRDESLHQQFSQFGSVTSAKVMMERDTGRSKGFGFVEMGSDSEAQDAI 61
Query: 93 EGMNAKYLDGWVIFVDPAKSREARP 117
G+N + +DG + V+ A+ EARP
Sbjct: 62 NGLNGRSVDGRALTVNVARPMEARP 86
>gi|20257701|gb|AAM16016.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 50/78 (64%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L AF+ +G+++ SK+I DR T RS+GFGFV+++ A EG
Sbjct: 18 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXXXXRSAIEG 77
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN K LDG I V+ A+S
Sbjct: 78 MNGKELDGRNITVNEAQS 95
>gi|195626882|gb|ACG35271.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 203
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 52/78 (66%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L AF+ +G+++ SK+I DR T RS+GFGFV++++ + A EG
Sbjct: 66 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 125
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN K LDG I V+ A+S
Sbjct: 126 MNGKELDGRNITVNEAQS 143
>gi|121583148|ref|YP_973589.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans CJ2]
gi|120596410|gb|ABM39847.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans CJ2]
Length = 148
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 52/84 (61%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V L DE L+++F FG + +KV+ +R TGRSKGFGFV + +A+ A G
Sbjct: 4 KLYVGNLPYTVRDEDLQQSFGQFGTVTSAKVMMERDTGRSKGFGFVEMANDAQAQAAING 63
Query: 95 MNAKYLDGWVIFVDPAKSREARPP 118
MN + L G I V+ A+ EARPP
Sbjct: 64 MNGQPLGGRSITVNEARPMEARPP 87
>gi|421976742|gb|AFX73254.1| glycine rich RNA binding protein 1a [Solanum lycopersicum]
Length = 164
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 52/77 (67%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
FV GL+ TTD L +AF+ +G++V SK+I DR TGRS+GFGFV++ + + A GM
Sbjct: 9 CFVGGLAWATTDRTLSDAFSTYGEVVDSKIINDRETGRSRGFGFVTFKDEKSMKDAISGM 68
Query: 96 NAKYLDGWVIFVDPAKS 112
N + LDG I V+ A++
Sbjct: 69 NGQELDGRNITVNEAQA 85
>gi|121583453|ref|YP_973884.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans CJ2]
gi|120596707|gb|ABM40142.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans CJ2]
Length = 150
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 52/84 (61%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V L DE L+++F FG + +KV+ +R TGRSKGFGFV + +A+ A G
Sbjct: 4 KLYVGNLPYTVRDEDLQQSFGQFGAVTSAKVMMERDTGRSKGFGFVEMANDAQAQAAING 63
Query: 95 MNAKYLDGWVIFVDPAKSREARPP 118
MN + L G I V+ A+ EARPP
Sbjct: 64 MNGQPLGGRSITVNEARPMEARPP 87
>gi|404403808|ref|ZP_10995392.1| RNP-1 like RNA-binding protein [Alistipes sp. JC136]
Length = 105
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 51/82 (62%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++VS LS T+ E L FA FG++ + VITDR TGRS+GFGFV E+A +A E +
Sbjct: 3 IYVSHLSWGTSSEGLGNLFAQFGEVASANVITDRETGRSRGFGFVEMPDDEQARKAMEQL 62
Query: 96 NAKYLDGWVIFVDPAKSREARP 117
N +G I V+ A+ RE RP
Sbjct: 63 NGTNFEGQTITVNEARPREERP 84
>gi|119177425|ref|XP_001240490.1| hypothetical protein CIMG_07653 [Coccidioides immitis RS]
gi|320032129|gb|EFW14085.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
gi|392867546|gb|EAS29215.2| hypothetical protein CIMG_07653 [Coccidioides immitis RS]
Length = 147
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 51/83 (61%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LF+ GL+ TTDE L++ F+ FG + + V+ DR T RS+GFGFV + S EAE A
Sbjct: 3 KLFIGGLAWHTTDETLRQGFSKFGSIEEAIVVKDRDTNRSRGFGFVRFASEGEAEAAMNE 62
Query: 95 MNAKYLDGWVIFVDPAKSREARP 117
MN + DG I VD A R + P
Sbjct: 63 MNNQEFDGRTIRVDKAADRPSGP 85
>gi|299751777|ref|XP_001830476.2| glycine-rich RNA binding protein [Coprinopsis cinerea okayama7#130]
gi|298409530|gb|EAU91356.2| glycine-rich RNA binding protein [Coprinopsis cinerea okayama7#130]
Length = 142
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 57/81 (70%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S +++V LS TTD+ L++AF+ +G ++ S V+ DR TGRS+GFGFV+Y++ EEA+ A
Sbjct: 2 SAKVYVGNLSWNTTDDSLRQAFSQYGNVLDSIVMRDRDTGRSRGFGFVTYSATEEADAAI 61
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
++ + LDG I V+ A +R
Sbjct: 62 ASLHDQELDGRRIKVNIANAR 82
>gi|351723119|ref|NP_001235732.1| uncharacterized protein LOC100526902 [Glycine max]
gi|255631115|gb|ACU15923.1| unknown [Glycine max]
Length = 176
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 53/83 (63%)
Query: 29 STLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEA 88
S + R F+ GL+ T+D KLK+ F FG+L+ +KV+ D+ +GRS+GFGFV++ +
Sbjct: 2 SDVEEYRCFIGGLAWSTSDRKLKDTFEKFGKLIEAKVVVDKFSGRSRGFGFVTFDDKKAM 61
Query: 89 ERAREGMNAKYLDGWVIFVDPAK 111
+ A + MN LDG I VD A+
Sbjct: 62 DEAIDAMNGMDLDGRTITVDRAQ 84
>gi|20257699|gb|AAM16015.1| glycine-rich RNA binding protein [Zea mays]
gi|20257705|gb|AAM16018.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 50/78 (64%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L AF+ +G+++ SK+I DR T RS+GFGFV+++ A EG
Sbjct: 18 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXXAMRSAIEG 77
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN K LDG I V+ A+S
Sbjct: 78 MNGKELDGRNITVNEAQS 95
>gi|20257679|gb|AAM16005.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 50/78 (64%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L AF+ +G+++ SK+I DR T RS+GFGFV+++ A EG
Sbjct: 18 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXXAMRSAIEG 77
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN K LDG I V+ A+S
Sbjct: 78 MNGKELDGRNITVNEAQS 95
>gi|302809382|ref|XP_002986384.1| hypothetical protein SELMODRAFT_49298 [Selaginella moellendorffii]
gi|300145920|gb|EFJ12593.1| hypothetical protein SELMODRAFT_49298 [Selaginella moellendorffii]
Length = 145
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 51/77 (66%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GLS TTD L++AF+P+G ++ +KV+ DR T RS+GFGFV++ + A +G
Sbjct: 3 RCFVGGLSWATTDRNLEDAFSPYGTVIEAKVVLDRDTERSRGFGFVTFGDENSMQDAIDG 62
Query: 95 MNAKYLDGWVIFVDPAK 111
M+ K LDG I V A+
Sbjct: 63 MHGKDLDGRSITVSKAQ 79
>gi|168034546|ref|XP_001769773.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678882|gb|EDQ65335.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 134
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 61/89 (68%), Gaps = 3/89 (3%)
Query: 31 LTSPRLFV-SGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAE 89
++S +LF+ +GL+ T + L++AF+ FG + K+I DR TGRS+GFGFV++TS EEAE
Sbjct: 42 MSSSKLFIGAGLAWATDENTLRDAFSSFGTVTEVKIILDRDTGRSRGFGFVNFTSPEEAE 101
Query: 90 RAREGMNAKYLDGWVIFVDPA--KSREAR 116
A + M+ + L G I VD A K+RE R
Sbjct: 102 VALQEMDGRELAGRQIRVDYATDKARETR 130
>gi|164659141|ref|XP_001730695.1| hypothetical protein MGL_2149 [Malassezia globosa CBS 7966]
gi|159104592|gb|EDP43481.1| hypothetical protein MGL_2149 [Malassezia globosa CBS 7966]
Length = 190
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 63/109 (57%), Gaps = 13/109 (11%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+++V LS TTD+ L +AF+P+GQL V+ DR +GRS+GFGFV++ + +EA+ A
Sbjct: 3 KVYVGNLSWSTTDDGLAQAFSPYGQLTDYIVMKDRDSGRSRGFGFVTFMTQQEADAAIMA 62
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGFRTNKTVGWSG 143
+N + LDG I V+ A SR P G T ++G+SG
Sbjct: 63 LNEQELDGRRIRVNMANSRP-------------PMVHGGMTGASLGYSG 98
>gi|212546539|ref|XP_002153423.1| glycine-rich RNA-binding protein, putative [Talaromyces marneffei
ATCC 18224]
gi|210064943|gb|EEA19038.1| glycine-rich RNA-binding protein, putative [Talaromyces marneffei
ATCC 18224]
Length = 135
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 51/79 (64%)
Query: 34 PRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERARE 93
+LF+ GL+ TTD+ L+ F FG + + VI DR T RS+GFGFV +++ EA+ A E
Sbjct: 2 AKLFIGGLAWHTTDDTLRSGFEKFGTIEEAIVIKDRDTNRSRGFGFVRFSTDAEADAAIE 61
Query: 94 GMNAKYLDGWVIFVDPAKS 112
GMN + DG VI VD A +
Sbjct: 62 GMNNQDFDGRVIRVDRASN 80
>gi|268531322|ref|XP_002630787.1| Hypothetical protein CBG02484 [Caenorhabditis briggsae]
Length = 403
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 55/97 (56%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS ++KL+EAF PFG + +KVI D T +SKG+GFVSY EEAERA E
Sbjct: 132 HVFVGDLSSEVDNQKLREAFIPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQ 191
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEM 131
MN ++L I + A + P Y E+ E+
Sbjct: 192 MNGQWLGRRTIRTNWATRKPGDQEKPSNYNEKSYDEV 228
>gi|185133178|ref|NP_001117016.1| hyperosmotic glycine rich protein [Salmo salar]
gi|28173040|gb|AAO32675.1| hyperosmotic glycine rich protein [Salmo salar]
Length = 205
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 50/76 (65%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS TT++ L EAF+ +G + VI DR TGR +GFGFV Y + E+A+ A +
Sbjct: 6 KLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDAMDA 65
Query: 95 MNAKYLDGWVIFVDPA 110
MN + LDG I V+ A
Sbjct: 66 MNGQSLDGRTIRVNEA 81
>gi|45544646|ref|NP_956311.1| cold inducible RNA binding protein isoform 2 [Danio rerio]
gi|28856196|gb|AAH48027.1| Cold inducible RNA binding protein [Danio rerio]
gi|182891172|gb|AAI64022.1| Cirbp protein [Danio rerio]
Length = 184
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 52/76 (68%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LF+ GLS TT++ L+EAF+ +G + VI DR T RS+GFGFV++ + E+A+ A
Sbjct: 6 KLFIGGLSYDTTEQSLEEAFSKYGTIAKVDVIRDRETDRSRGFGFVTFENPEDAKDAMAA 65
Query: 95 MNAKYLDGWVIFVDPA 110
MN K +DG +I VD A
Sbjct: 66 MNGKQVDGRMIRVDEA 81
>gi|255535545|ref|YP_003095916.1| RNA-binding protein [Flavobacteriaceae bacterium 3519-10]
gi|255341741|gb|ACU07854.1| RNA-binding protein [Flavobacteriaceae bacterium 3519-10]
Length = 122
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 55/82 (67%), Gaps = 1/82 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+FVS ++ T +E L++ F+ FG++ +K+ITDR TGRS+GFGFV + E+ + A E +
Sbjct: 4 IFVSNINYSTREESLQDLFSEFGEVSSAKIITDRETGRSRGFGFVEMSD-EDGKNAIEAL 62
Query: 96 NAKYLDGWVIFVDPAKSREARP 117
N K LDG + V AK RE +P
Sbjct: 63 NGKELDGKELNVSEAKPREDKP 84
>gi|303315989|ref|XP_003067999.1| Glycine-rich RNA-binding protein 2, mitochondrial precursor ,
putative [Coccidioides posadasii C735 delta SOWgp]
gi|240107675|gb|EER25854.1| Glycine-rich RNA-binding protein 2, mitochondrial precursor ,
putative [Coccidioides posadasii C735 delta SOWgp]
Length = 117
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 51/83 (61%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LF+ GL+ TTDE L++ F+ FG + + V+ DR T RS+GFGFV + S EAE A
Sbjct: 3 KLFIGGLAWHTTDETLRQGFSKFGSIEEAIVVKDRDTNRSRGFGFVRFASEGEAEAAMNE 62
Query: 95 MNAKYLDGWVIFVDPAKSREARP 117
MN + DG I VD A R + P
Sbjct: 63 MNNQEFDGRTIRVDKAADRPSGP 85
>gi|1346180|sp|P49310.1|GRP1_SINAL RecName: Full=Glycine-rich RNA-binding protein GRP1A
gi|496233|gb|AAA59212.1| homology with RNA-binding proteins in meristematic tissue [Sinapis
alba]
Length = 166
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 52/77 (67%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L+ AF+ +G+++ SK+I DR TGRS+GFGFV++ + + A EG
Sbjct: 9 RCFVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEG 68
Query: 95 MNAKYLDGWVIFVDPAK 111
MN + LDG I V+ A+
Sbjct: 69 MNGQDLDGRSITVNEAQ 85
>gi|341900388|gb|EGT56323.1| CBN-TIAR-1 protein [Caenorhabditis brenneri]
Length = 399
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 55/97 (56%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS ++KL+EAF PFG + +KVI D T +SKG+GFVSY EEAERA E
Sbjct: 132 HVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQ 191
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEM 131
MN ++L I + A + P Y E+ E+
Sbjct: 192 MNGQWLGRRTIRTNWATRKPGDQEKPVHYNEKSYDEI 228
>gi|388492070|gb|AFK34101.1| unknown [Lotus japonicus]
Length = 211
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%)
Query: 29 STLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEA 88
S + R F+ GL+ T+D KLK+AF FG+L +KV+ D+ +GRS+GFGFV++ +
Sbjct: 2 SDVDEYRCFIGGLAWSTSDRKLKDAFEKFGKLTEAKVVVDKFSGRSRGFGFVTFDDKKAM 61
Query: 89 ERAREGMNAKYLDGWVIFVDPAK 111
+ A + MN LDG I VD +
Sbjct: 62 DEAIDAMNGMDLDGRTITVDKTQ 84
>gi|308493359|ref|XP_003108869.1| hypothetical protein CRE_11982 [Caenorhabditis remanei]
gi|308247426|gb|EFO91378.1| hypothetical protein CRE_11982 [Caenorhabditis remanei]
Length = 404
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 55/97 (56%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS ++KL+EAF PFG + +KVI D T +SKG+GFVSY EEAERA E
Sbjct: 134 HVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQ 193
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEM 131
MN ++L I + A + P Y E+ E+
Sbjct: 194 MNGQWLGRRTIRTNWATRKPGDQEKPTHYNEKSFDEI 230
>gi|1934994|emb|CAA73034.1| SGRP-1 [Solanum commersonii]
Length = 162
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 51/77 (66%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
FV GL+ TTD L +AF+ +G++V SK+I DR TGRS+GFGFV++ + + A GM
Sbjct: 9 CFVGGLAWATTDRTLSDAFSTYGEVVDSKIINDRETGRSRGFGFVTFKDEKSMKEAISGM 68
Query: 96 NAKYLDGWVIFVDPAKS 112
N LDG I V+ A++
Sbjct: 69 NGSELDGRNITVNEAQA 85
>gi|242823058|ref|XP_002488014.1| glycine-rich RNA-binding protein, putative [Talaromyces stipitatus
ATCC 10500]
gi|218712935|gb|EED12360.1| glycine-rich RNA-binding protein, putative [Talaromyces stipitatus
ATCC 10500]
Length = 134
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 51/79 (64%)
Query: 34 PRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERARE 93
+LF+ GL+ TTD+ L++ F FG + + VI DR T RS+GFGFV + + EA+ A +
Sbjct: 2 SKLFIGGLAWHTTDDTLRQGFEKFGTIEEAIVIKDRDTNRSRGFGFVRFATDAEADAAID 61
Query: 94 GMNAKYLDGWVIFVDPAKS 112
GMN + DG VI VD A +
Sbjct: 62 GMNNQEFDGRVIRVDRASN 80
>gi|312282683|dbj|BAJ34207.1| unnamed protein product [Thellungiella halophila]
Length = 166
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 51/83 (61%)
Query: 29 STLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEA 88
ST R FV GL+ T D L+ F+ FG+++ SK+I DR TGRS+GFGFV++ +
Sbjct: 2 STDVEYRCFVGGLAWATADADLERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSM 61
Query: 89 ERAREGMNAKYLDGWVIFVDPAK 111
A E MN K LDG I V+ A+
Sbjct: 62 RDAIEEMNGKELDGRSITVNEAQ 84
>gi|544416|sp|Q05966.1|GRP10_BRANA RecName: Full=Glycine-rich RNA-binding protein 10
gi|17819|emb|CAA78513.1| glycine-rich RNA binding protein [Brassica napus]
Length = 169
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D +L+ F+ FG+++ SK+I DR TGRS+GFGFV++ + + A +
Sbjct: 7 RCFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDE 66
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN K LDG I V+ A+S
Sbjct: 67 MNGKELDGRTITVNEAQS 84
>gi|326509231|dbj|BAJ91532.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510271|dbj|BAJ87352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 252
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 55/84 (65%)
Query: 30 TLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAE 89
++S +LFV GLS T + L++AF+ +G+++ +K+I DR TGRS+GFGF++Y + E+A
Sbjct: 27 CMSSSKLFVGGLSYTTDEGSLRDAFSHYGEIIDAKIIVDRDTGRSRGFGFITYAAEEQAS 86
Query: 90 RAREGMNAKYLDGWVIFVDPAKSR 113
A ++ K L G + V A R
Sbjct: 87 SAIMALDGKDLHGRNLRVSAATER 110
>gi|302814001|ref|XP_002988685.1| hypothetical protein SELMODRAFT_18499 [Selaginella moellendorffii]
gi|300143506|gb|EFJ10196.1| hypothetical protein SELMODRAFT_18499 [Selaginella moellendorffii]
Length = 135
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 51/77 (66%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GLS TTD L++AF+P+G ++ +KV+ DR T RS+GFGFV++ + A +G
Sbjct: 9 RCFVGGLSWATTDRNLEDAFSPYGTVIEAKVVLDRDTERSRGFGFVTFGDENSMQDAIDG 68
Query: 95 MNAKYLDGWVIFVDPAK 111
M+ K LDG I V A+
Sbjct: 69 MHGKDLDGRSITVSKAQ 85
>gi|431899704|gb|ELK07658.1| Polyadenylate-binding protein 4-like protein [Pteropus alecto]
Length = 370
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DE+LKE F+ FG+++ KV+TD + GRSKGFGFVS+ S E A+RA E M
Sbjct: 192 VYIKNFGDDMDDERLKEIFSHFGKILSVKVMTD-SRGRSKGFGFVSFDSHEAAQRAVEIM 250
Query: 96 NAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSE 130
N K L G +FV A+ + R EQ E
Sbjct: 251 NGKDLSGQPLFVGRAQKKAERQAELKLMFEQMKQE 285
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L E F+ FG+++ SKV++D A S+G+ FV + S A+RA E M
Sbjct: 100 VFIKNLHKSIDNKTLYEHFSAFGKILSSKVMSDDAG--SRGYAFVHFQSQTAADRAIEAM 157
Query: 96 NAKYLDGWVIFVDPAKSREARPPP 119
N L G +FV P K+R+ R
Sbjct: 158 NGALLKGCRLFVGPFKNRKDRQAE 181
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L++ L DE+L+ F+ FG + KV+ + GRSKGFG + ++S EEA +A
Sbjct: 294 KLYIKNLDDSIDDERLRREFSSFGSISRVKVM--KEEGRSKGFGLICFSSPEEATKAMVE 351
Query: 95 MNAKYL 100
MN + L
Sbjct: 352 MNGRIL 357
>gi|361067299|gb|AEW07961.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
gi|383126579|gb|AFG43909.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
gi|383126581|gb|AFG43910.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
gi|383126583|gb|AFG43911.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
gi|383126585|gb|AFG43912.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
gi|383126587|gb|AFG43913.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
gi|383126589|gb|AFG43914.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
gi|383126591|gb|AFG43915.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
Length = 84
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%)
Query: 47 DEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIF 106
++ L EAF+ FG++V K++ DR + RSKGFGFV Y S +AERA+ MN K L G +IF
Sbjct: 1 EKALTEAFSRFGEVVEVKIVMDRVSQRSKGFGFVQYASEADAERAKAEMNGKVLSGRIIF 60
Query: 107 VDPAK 111
VD K
Sbjct: 61 VDDVK 65
>gi|239818248|ref|YP_002947158.1| RNP-1 like RNA-binding protein [Variovorax paradoxus S110]
gi|239804825|gb|ACS21892.1| RNP-1 like RNA-binding protein [Variovorax paradoxus S110]
Length = 181
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 51/84 (60%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V L D L++AF FG + +KV+ +R TGRSKGFGFV S EA+ A G
Sbjct: 4 KLYVGNLPYSVRDSDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAING 63
Query: 95 MNAKYLDGWVIFVDPAKSREARPP 118
MN + L G + V+ A+ EARPP
Sbjct: 64 MNGQPLGGRSVVVNEARPMEARPP 87
>gi|326319545|ref|YP_004237217.1| RNP-1 like RNA-binding protein [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323376381|gb|ADX48650.1| RNP-1 like RNA-binding protein [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 172
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 50/84 (59%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V L D L++AF FG + +KV+ +R TGRSKGFGFV S EA+ A G
Sbjct: 4 KLYVGNLPYSVRDNDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAING 63
Query: 95 MNAKYLDGWVIFVDPAKSREARPP 118
MN + L G I V+ A+ E RPP
Sbjct: 64 MNGQALGGRSIVVNEARPMEPRPP 87
>gi|351725469|ref|NP_001238373.1| glycine-rich RNA-binding protein [Glycine max]
gi|5726567|gb|AAD48471.1|AF169205_1 glycine-rich RNA-binding protein [Glycine max]
Length = 160
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 51/77 (66%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L+ AF+ +G++V +K+I DR TGRS+GFGFV++ S + + A
Sbjct: 9 RCFVGGLAWATDDHALERAFSQYGEIVETKIINDRETGRSRGFGFVTFASEQSMKDAIGA 68
Query: 95 MNAKYLDGWVIFVDPAK 111
MN + LDG I V+ A+
Sbjct: 69 MNGQNLDGRNITVNEAQ 85
>gi|359807285|ref|NP_001240860.1| uncharacterized protein LOC100815224 [Glycine max]
gi|255645181|gb|ACU23088.1| unknown [Glycine max]
Length = 208
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 53/83 (63%)
Query: 29 STLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEA 88
S + R F+ GL+ T+D KLK+ F FG+L+ +KV+ D+ +GRS+GFGFV++ +
Sbjct: 2 SDVEEFRCFIGGLAWSTSDRKLKDTFEKFGKLIEAKVVVDKFSGRSRGFGFVTFDDKKAM 61
Query: 89 ERAREGMNAKYLDGWVIFVDPAK 111
+ A + MN LDG I VD A+
Sbjct: 62 DEAIDAMNGIDLDGRTITVDRAQ 84
>gi|330920718|ref|XP_003299119.1| hypothetical protein PTT_10054 [Pyrenophora teres f. teres 0-1]
gi|311327336|gb|EFQ92795.1| hypothetical protein PTT_10054 [Pyrenophora teres f. teres 0-1]
Length = 171
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 49/80 (61%)
Query: 34 PRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERARE 93
+LF+ GL+ T D+ L++ F FGQ+ + V+ DR TGRS+GFGFV Y EA+ A +
Sbjct: 2 SKLFIGGLAWHTDDQALRQKFEEFGQVEEAVVVKDRDTGRSRGFGFVRYAQDTEADAAMQ 61
Query: 94 GMNAKYLDGWVIFVDPAKSR 113
MN + DG I VD A R
Sbjct: 62 AMNNEEFDGRRIRVDKASDR 81
>gi|189203945|ref|XP_001938308.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187985407|gb|EDU50895.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 168
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 49/80 (61%)
Query: 34 PRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERARE 93
+LF+ GL+ T D+ L++ F FGQ+ + V+ DR TGRS+GFGFV Y EA+ A +
Sbjct: 2 SKLFIGGLAWHTDDQALRQKFEEFGQVEEAVVVKDRDTGRSRGFGFVRYAQDTEADAAMQ 61
Query: 94 GMNAKYLDGWVIFVDPAKSR 113
MN + DG I VD A R
Sbjct: 62 AMNNEEFDGRRIRVDKASDR 81
>gi|225423629|ref|XP_002274983.1| PREDICTED: glycine-rich RNA-binding protein 2 [Vitis vinifera]
gi|359473083|ref|XP_003631246.1| PREDICTED: glycine-rich RNA-binding protein 2-like [Vitis vinifera]
gi|297738010|emb|CBI27211.3| unnamed protein product [Vitis vinifera]
gi|297738011|emb|CBI27212.3| unnamed protein product [Vitis vinifera]
Length = 140
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R+ V+ LS T+ L+E F+ FGQ+V V+ D+A R +G+ F+ YTS + A A E
Sbjct: 39 RIMVTNLSYATSKSSLQEEFSKFGQIVEVDVVKDKAAKRPRGYAFIQYTSQDHAMLALEN 98
Query: 95 MNAKYLDGWVIFVDPAK------SREARPPPPPPYPEQQPSE 130
M+ KYLDG V+ V+ AK R R PP E + E
Sbjct: 99 MDHKYLDGRVVCVELAKPGKNDFGRYPRTCGPPSKKEDETRE 140
>gi|409080475|gb|EKM80835.1| hypothetical protein AGABI1DRAFT_112564 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426197375|gb|EKV47302.1| hypothetical protein AGABI2DRAFT_192533 [Agaricus bisporus var.
bisporus H97]
Length = 168
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 53/74 (71%)
Query: 40 GLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKY 99
LS TTDE L++AF+ FGQ++ S V+ DR TGRS+GFGFV++++ EA+ A G+N +
Sbjct: 33 NLSWNTTDETLRQAFSDFGQVLDSIVMRDRDTGRSRGFGFVTFSNSGEADAAINGLNEQE 92
Query: 100 LDGWVIFVDPAKSR 113
LDG I V+ A +R
Sbjct: 93 LDGRRIKVNMANAR 106
>gi|261351264|gb|ACX71299.1| RNA-binding protein RZ-1 [Capsicum annuum]
Length = 202
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 50/81 (61%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R F+ LS T+D LK+AF FG LV +KV+ D+ +GRS+GFGFV++ E A E
Sbjct: 8 RCFIGNLSWSTSDRGLKDAFEKFGNLVDAKVVLDKFSGRSRGFGFVTFDDKRAMEDAIEA 67
Query: 95 MNAKYLDGWVIFVDPAKSREA 115
MN LDG I VD A+ ++
Sbjct: 68 MNGMDLDGRAITVDKAQPQQG 88
>gi|392570008|gb|EIW63181.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 126
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 56/81 (69%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S +++V LS TTD+ L+ AF+ +GQ++ S V+ DR TGRS+GFGFV+++S EA+ A
Sbjct: 2 STKVYVGNLSWNTTDDSLRSAFSNYGQILDSIVMRDRDTGRSRGFGFVTFSSSGEAQTAI 61
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
+N + LDG I V+ A +R
Sbjct: 62 SSLNEQELDGRRIKVNLANAR 82
>gi|213625217|gb|AAI70091.1| LOC397919 protein [Xenopus laevis]
Length = 704
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 54/82 (65%), Gaps = 3/82 (3%)
Query: 30 TLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAE 89
++ S LFV GLS TT+E LKEAF + ++++TDR TG SKGFGFV ++S E+A+
Sbjct: 549 SVQSKTLFVRGLSEDTTEETLKEAFDG---SINARIVTDRDTGASKGFGFVDFSSAEDAK 605
Query: 90 RAREGMNAKYLDGWVIFVDPAK 111
ARE M +DG + +D AK
Sbjct: 606 AAREAMEDGEIDGNKVTLDFAK 627
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 19 KSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFG 78
KSQ R S L V+ LS T++ L+E F + + + GR+KGF
Sbjct: 450 KSQNSGGRRGPAGDSKVLVVNNLSYSATEDSLREVFEK-----ATSIRIPQNQGRAKGFA 504
Query: 79 FVSYTSIEEAERAREGMNAKYLDGWVI 105
FV ++S+E+A+ A + N ++G I
Sbjct: 505 FVEFSSMEDAKEAMDSCNNTEVEGRSI 531
>gi|148226518|ref|NP_001081557.1| nucleolin [Xenopus laevis]
gi|295899|emb|CAA51460.1| nucleolin [Xenopus laevis]
Length = 705
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 54/82 (65%), Gaps = 3/82 (3%)
Query: 30 TLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAE 89
++ S LFV GLS TT+E LKEAF + ++++TDR TG SKGFGFV ++S E+A+
Sbjct: 550 SVQSKTLFVRGLSEDTTEETLKEAFDG---SINARIVTDRDTGASKGFGFVDFSSAEDAK 606
Query: 90 RAREGMNAKYLDGWVIFVDPAK 111
ARE M +DG + +D AK
Sbjct: 607 AAREAMEDGEIDGNKVTLDFAK 628
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 19 KSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFG 78
KSQ R S L V+ LS T++ L+E F + + + GR+KGF
Sbjct: 451 KSQNSGGRRGPAGDSKVLVVNNLSYSATEDSLREVFEK-----ATSIRIPQNQGRAKGFA 505
Query: 79 FVSYTSIEEAERAREGMNAKYLDGWVI 105
FV ++S+E+A+ A + N ++G I
Sbjct: 506 FVEFSSMEDAKEAMDSCNNTEVEGRSI 532
>gi|432915990|ref|XP_004079241.1| PREDICTED: cold-inducible RNA-binding protein-like [Oryzias
latipes]
Length = 174
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LF+ GLS T ++ L AF +G + VI D+ TGRS+GFGFV Y ++E+A+ A +
Sbjct: 6 KLFIGGLSFETNEDSLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNVEDAKDALDA 65
Query: 95 MNAKYLDGWVIFVDP 109
MN K LDG I VD
Sbjct: 66 MNGKTLDGRAIRVDE 80
>gi|120613408|ref|YP_973086.1| RNP-1-like RNA-binding protein [Acidovorax citrulli AAC00-1]
gi|120591872|gb|ABM35312.1| RNP-1-like RNA-binding protein [Acidovorax citrulli AAC00-1]
Length = 176
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 50/84 (59%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V L D L++AF FG + +KV+ +R TGRSKGFGFV S EA+ A G
Sbjct: 4 KLYVGNLPYSVRDNDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAING 63
Query: 95 MNAKYLDGWVIFVDPAKSREARPP 118
MN + L G I V+ A+ E RPP
Sbjct: 64 MNGQALGGRSIVVNEARPMEPRPP 87
>gi|426247620|ref|XP_004023599.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Ovis aries]
Length = 383
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DE+LKE F+ +G+ + KV+TD ++G+SKGFGFVS+ S E A+RA E M
Sbjct: 187 VYIKNFGDEMDDERLKEVFSKYGKTLSVKVMTD-SSGKSKGFGFVSFDSHEAAKRAVEEM 245
Query: 96 NAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSE 130
N K ++G ++FV A+ + R EQ E
Sbjct: 246 NGKDINGQLLFVGRAQKKAERQAELKQMFEQLKHE 280
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 34 PRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERARE 93
+L++ L DEKL+ F+ FG + KV+ + GRSKGFG + ++S EEA +A
Sbjct: 288 AKLYIKNLDETIDDEKLRREFSSFGSISRVKVMQEE--GRSKGFGLICFSSAEEATKAMT 345
Query: 94 GMNAKYL 100
MN + L
Sbjct: 346 EMNGRIL 352
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L R ++ L E F+ FG+++ SKV++D S+G+ FV + + A+RA E M
Sbjct: 95 VFIKNLDRSIDNKTLYEHFSAFGKILSSKVMSDDHG--SRGYAFVHFQNQIAADRAIEEM 152
Query: 96 NAKYLDGWVIFVDPAKSREARPPP 119
N L +FV KSR+ R
Sbjct: 153 NGTLLKDCRLFVGRFKSRKDREAE 176
>gi|399931791|gb|AFP57445.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 144
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 63/104 (60%), Gaps = 4/104 (3%)
Query: 13 SGSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATG 72
S +S + S L ++R ST +LFV GLS T D+ L++AFA FG +V + VI D +G
Sbjct: 21 SATSPMPSMLDAVRCMST----KLFVGGLSWGTDDQSLRDAFATFGDVVDAGVIVDGDSG 76
Query: 73 RSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREAR 116
RS+GFGFV+++ E A A + M+ + L G I V A+ R R
Sbjct: 77 RSRGFGFVNFSDDECANEAIKAMDGQELQGRNIRVSIAQERAPR 120
>gi|168229272|ref|NP_001094949.1| poly(A) binding protein, cytoplasmic 4-like [Mus musculus]
gi|148703238|gb|EDL35185.1| mCG12357 [Mus musculus]
Length = 370
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DEKL+E F+ +GQ + KV+ D ATG+SKGFGFVS+ S E A+ A E M
Sbjct: 192 VYIKNFGDDVDDEKLREVFSKYGQTLSVKVMKD-ATGKSKGFGFVSFDSHEAAKNAVEDM 250
Query: 96 NAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSE 130
N + ++G IFV A+ + R EQ E
Sbjct: 251 NGQDINGQTIFVGRAQKKVERQAELKEMFEQMKKE 285
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L E F+PFG ++ SKV+TD G SKG+GFV Y A+RA E M
Sbjct: 100 VFIKNLDKSIDNKTLYEHFSPFGTIMSSKVMTD-GEG-SKGYGFVHYQDRRAADRAIEEM 157
Query: 96 NAKYLDGWVIFVDPAKSREARPPPPPPYP 124
N K L +FV KSR+ R P
Sbjct: 158 NGKLLRESTLFVARFKSRKDREAELRDKP 186
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTS 84
+ +L++ L DE L++ F+ FG + KV+ + G+SKGFG + + S
Sbjct: 292 AAKLYIKNLDDTIDDETLRKEFSVFGSICRVKVMQE--AGQSKGFGLICFFS 341
>gi|357122080|ref|XP_003562744.1| PREDICTED: uncharacterized protein LOC100841917 [Brachypodium
distachyon]
Length = 324
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 54/84 (64%)
Query: 30 TLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAE 89
++S +LFV GLS T D LK+AF+ +G + ++VI DR TGRSKGFGF++YTS E A
Sbjct: 28 CMSSSKLFVGGLSYATDDPTLKDAFSHYGDVCEARVIIDRDTGRSKGFGFITYTSSEAAA 87
Query: 90 RAREGMNAKYLDGWVIFVDPAKSR 113
A M+ K L G ++ V A R
Sbjct: 88 AAISAMDGKDLQGRMVKVAYATDR 111
>gi|239611503|gb|EEQ88490.1| glycine-rich RNA-binding protein [Ajellomyces dermatitidis ER-3]
gi|327348484|gb|EGE77341.1| glycine-rich RNA-binding protein [Ajellomyces dermatitidis ATCC
18188]
Length = 143
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 48/80 (60%)
Query: 34 PRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERARE 93
+LFV GL+ TTDE L+ F +G + + V+ DR T RS+GFGFV + S EA+ A
Sbjct: 2 SKLFVGGLAWHTTDETLRVGFEKYGTIEEATVVKDRDTNRSRGFGFVRFASDTEADTAMN 61
Query: 94 GMNAKYLDGWVIFVDPAKSR 113
MN + DG VI VD A R
Sbjct: 62 AMNNQEFDGRVIRVDKASDR 81
>gi|195621182|gb|ACG32421.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 146
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 51/78 (65%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV L+ T D L AF+ +G+++ SK+I DR T RS+GFGFV++++ + A EG
Sbjct: 9 RCFVGXLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 68
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN K LDG I V+ A+S
Sbjct: 69 MNGKELDGRNITVNEAQS 86
>gi|169772913|ref|XP_001820925.1| glycine-rich RNA-binding protein 2 [Aspergillus oryzae RIB40]
gi|238490830|ref|XP_002376652.1| heterogeneous nuclear ribonucleoprotein G, putative [Aspergillus
flavus NRRL3357]
gi|83768786|dbj|BAE58923.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220697065|gb|EED53406.1| heterogeneous nuclear ribonucleoprotein G, putative [Aspergillus
flavus NRRL3357]
Length = 125
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 58/85 (68%)
Query: 31 LTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAER 90
++S +++V LS T DE L++ F+ FG ++ + V+ DR TGRS+GFGFV++++ EA+
Sbjct: 1 MSSAKVYVGNLSWNTNDESLRQTFSEFGNVLDAIVMKDRETGRSRGFGFVTFSAQTEADA 60
Query: 91 AREGMNAKYLDGWVIFVDPAKSREA 115
A G+N + LDG I V+ A +R A
Sbjct: 61 AIGGLNEQELDGRRIRVNLANARPA 85
>gi|194334049|ref|YP_002015909.1| RNP-1 like RNA-binding protein [Prosthecochloris aestuarii DSM 271]
gi|194311867|gb|ACF46262.1| RNP-1 like RNA-binding protein [Prosthecochloris aestuarii DSM 271]
Length = 90
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 52/88 (59%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ L T+E L+EAF FG + + +ITD+ TGRSKGFGFV +S ++A A E +
Sbjct: 3 IYIGNLDYGVTEEDLREAFGEFGDVSSANIITDKFTGRSKGFGFVEMSSSDDANEAIESL 62
Query: 96 NAKYLDGWVIFVDPAKSREARPPPPPPY 123
N L+G I V+ AK R RP Y
Sbjct: 63 NDTDLNGRTIKVNEAKPRAERPARRYQY 90
>gi|348501352|ref|XP_003438234.1| PREDICTED: cold-inducible RNA-binding protein A-like [Oreochromis
niloticus]
Length = 183
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 48/76 (63%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LF+ GLS T ++ L AF +G + VI D+ TGRS+GFGFV Y + E+A+ A +
Sbjct: 6 KLFIGGLSFETNEDSLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNAEDAKDALDA 65
Query: 95 MNAKYLDGWVIFVDPA 110
MN K LDG I VD A
Sbjct: 66 MNGKTLDGRAIRVDEA 81
>gi|59802519|gb|AAX07503.1| unknown [Gemmata sp. Wa1-1]
Length = 122
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 63/110 (57%), Gaps = 6/110 (5%)
Query: 8 RRALSSGSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVIT 67
RRA+ G ++++ G + +L+V LS TD +L++ F P+G +V ++VI
Sbjct: 15 RRAVPRGK-LIQAAAGDRAAGEFVVGKKLYVGNLSWGVTDSQLQDMFTPYGSVVSAQVIM 73
Query: 68 DRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREARP 117
DR TGRSKGFGFV + +EA+ A GM+ + ++G P EARP
Sbjct: 74 DRDTGRSKGFGFVEMGTDQEAQAAITGMHGQVIEG-----RPLTVNEARP 118
>gi|398810631|ref|ZP_10569445.1| RRM domain-containing RNA-binding protein [Variovorax sp. CF313]
gi|398082488|gb|EJL73237.1| RRM domain-containing RNA-binding protein [Variovorax sp. CF313]
Length = 179
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 51/84 (60%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V L D L++AF FG + +KV+ +R TGRSKGFGFV S EA+ A G
Sbjct: 4 KLYVGNLPYSVRDGDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAING 63
Query: 95 MNAKYLDGWVIFVDPAKSREARPP 118
MN + L G + V+ A+ EARPP
Sbjct: 64 MNGQPLGGRSVVVNEARPMEARPP 87
>gi|319796634|ref|YP_004158274.1| rnp-1 like RNA-binding protein [Variovorax paradoxus EPS]
gi|315599097|gb|ADU40163.1| RNP-1 like RNA-binding protein [Variovorax paradoxus EPS]
Length = 189
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 51/84 (60%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V L D L++AF FG + +KV+ +R TGRSKGFGFV S EA+ A G
Sbjct: 4 KLYVGNLPYSVRDGDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAING 63
Query: 95 MNAKYLDGWVIFVDPAKSREARPP 118
MN + L G + V+ A+ EARPP
Sbjct: 64 MNGQPLGGRSVVVNEARPMEARPP 87
>gi|224149436|ref|XP_002336806.1| predicted protein [Populus trichocarpa]
gi|222836937|gb|EEE75330.1| predicted protein [Populus trichocarpa]
Length = 112
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 66/116 (56%), Gaps = 6/116 (5%)
Query: 18 LKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGF 77
+ S L +IR ++S +LF+ GL D LKEAF+ +G+++ ++VI DR TGRS+GF
Sbjct: 1 MVSMLNTIR---CMSSSKLFIGGLPWSADDHTLKEAFSGYGEVIEARVIMDRETGRSRGF 57
Query: 78 GFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
GFVSY S E A A+ M+ + L G + V A E R PP Y + G+
Sbjct: 58 GFVSYDSSESASEAQSAMDGQELGGRNVRVSFA---EERSRPPRSYNDDYQGNRGY 110
>gi|261205092|ref|XP_002627283.1| glycine-rich RNA-binding protein [Ajellomyces dermatitidis
SLH14081]
gi|239592342|gb|EEQ74923.1| glycine-rich RNA-binding protein [Ajellomyces dermatitidis
SLH14081]
Length = 143
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 48/80 (60%)
Query: 34 PRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERARE 93
+LFV GL+ TTDE L+ F +G + + V+ DR T RS+GFGFV + S EA+ A
Sbjct: 2 SKLFVGGLAWHTTDETLRVGFEKYGTIEEATVVKDRDTNRSRGFGFVRFASDTEADTAMN 61
Query: 94 GMNAKYLDGWVIFVDPAKSR 113
MN + DG VI VD A R
Sbjct: 62 AMNNQEFDGRVIRVDKASDR 81
>gi|89902981|ref|YP_525452.1| RNA-binding region RNP-1 [Rhodoferax ferrireducens T118]
gi|89347718|gb|ABD71921.1| RNA-binding region RNP-1 [Rhodoferax ferrireducens T118]
Length = 140
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 51/84 (60%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V L DE L++AFA G + +KV+ +R TGRSKGFGFV S EA+ A G
Sbjct: 4 KLYVGNLPYTFRDEDLQQAFAAHGTVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAING 63
Query: 95 MNAKYLDGWVIFVDPAKSREARPP 118
MN + G + V+ A+ EARPP
Sbjct: 64 MNGQQYGGRGLVVNEARPMEARPP 87
>gi|59802525|gb|AAX07506.1| unknown [Gemmata sp. Wa1-1]
Length = 163
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V L TDE+L+ F P+G + ++VI DR TGRSKGFGFV S +EA+ A G
Sbjct: 65 KLYVGNLGYGVTDEQLRGMFGPYGSVQTAQVIMDRDTGRSKGFGFVEMNSDQEAQAAIAG 124
Query: 95 MNAKYLDGWVIFVDPAKSR 113
MN + +G + V+ AK +
Sbjct: 125 MNGQMSEGRALTVNEAKPK 143
>gi|417399827|gb|JAA46899.1| Putative polyadenylate-binding protein rrm superfamily [Desmodus
rotundus]
Length = 370
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DE+LKE F+ +G++V KV+TD ++G+SKGFGFVS+ + E A+RA E M
Sbjct: 192 VYIKNFGDDMDDERLKEVFSQYGKIVSVKVMTD-SSGKSKGFGFVSFDTHEAAQRAVEYM 250
Query: 96 NAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSE 130
N K + G ++FV A+ + R EQ E
Sbjct: 251 NGKDICGQMVFVGRAQKKAERQAELKQMFEQLKRE 285
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L R ++ L E F+ FG+++ SKV++D S+G+ FV + S A+RA E M
Sbjct: 100 VFIKNLDRSIDNKMLYEHFSAFGKILSSKVMSDDKG--SRGYAFVHFQSQSAADRAIEEM 157
Query: 96 NAKYLDGWVIFVDPAKSREARPPP 119
N L +FV P K+R+ R
Sbjct: 158 NGALLKNCRLFVGPFKNRKEREAE 181
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L++ L +E+L+ AF+ FG + KV+ + GRSKGFG + ++ EEA +A
Sbjct: 294 KLYIKNLDETIDEEQLRRAFSSFGSMSRVKVMEEE--GRSKGFGLICFSCPEEATKAMAE 351
Query: 95 MNAKYLDGWVIFVDPAK 111
MN + L I + A+
Sbjct: 352 MNGQVLGSKAINIALAQ 368
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V L T++ L F P G ++ ++ D T RS G+ +V++ ++ +A++ + M
Sbjct: 12 LYVGDLPADVTEDMLFRKFNPVGPVLSIRICRDLVTRRSLGYAYVNFLNLADAQKVLDTM 71
Query: 96 NAKYLDGWVI 105
N + G I
Sbjct: 72 NFDMIQGKSI 81
>gi|304311883|ref|YP_003811481.1| RNA-binding region RNP-1 (RNA recognition motif) [gamma
proteobacterium HdN1]
gi|301797616|emb|CBL45837.1| RNA-binding region RNP-1 (RNA recognition motif) [gamma
proteobacterium HdN1]
Length = 92
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 54/85 (63%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++V L+ ++E+LKEAF FG++ +I D+ TG+SKGFGFV + EA+ A +GM
Sbjct: 3 IYVGNLAYGVSEEELKEAFGAFGEVASVSLIKDKFTGQSKGFGFVEMPNNSEADAAIKGM 62
Query: 96 NAKYLDGWVIFVDPAKSREARPPPP 120
N K L G I V+ AK RE RP P
Sbjct: 63 NDKPLKGRPIKVNQAKPREDRPSAP 87
>gi|213623691|gb|AAI70089.1| LOC397919 protein [Xenopus laevis]
Length = 704
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 54/82 (65%), Gaps = 3/82 (3%)
Query: 30 TLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAE 89
++ S LFV GLS TT+E LKEAF + ++++TDR TG SKGFGFV ++S E+A+
Sbjct: 549 SVQSKTLFVRGLSEDTTEETLKEAF---DGSINARIVTDRDTGASKGFGFVDFSSSEDAK 605
Query: 90 RAREGMNAKYLDGWVIFVDPAK 111
ARE M +DG + +D AK
Sbjct: 606 AAREAMEDGEIDGNKVTLDFAK 627
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 19 KSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFG 78
KSQ R S L V+ LS T++ L+E F + + + GR+KGF
Sbjct: 450 KSQNSGGRRGPAGDSKVLVVNNLSYSATEDSLREVFEK-----ATSIRIPQNQGRAKGFA 504
Query: 79 FVSYTSIEEAERAREGMNAKYLDGWVI 105
FV ++S+E+A+ A + N ++G I
Sbjct: 505 FVEFSSMEDAKEAMDSCNNTEVEGRSI 531
>gi|229367642|gb|ACQ58801.1| Cold-inducible RNA-binding protein [Anoplopoma fimbria]
Length = 179
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 48/76 (63%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LF+ GLS T +E L AF +G + VI DR T +S+GFGFV Y + E+A+ A +G
Sbjct: 6 KLFIGGLSFETNEESLAAAFGKYGTIEKVDVIRDRETEKSRGFGFVKYDNAEDAKDAMDG 65
Query: 95 MNAKYLDGWVIFVDPA 110
MN + LDG I VD A
Sbjct: 66 MNGQTLDGRTIRVDEA 81
>gi|319762031|ref|YP_004125968.1| rnp-1 like RNA-binding protein [Alicycliphilus denitrificans BC]
gi|330826150|ref|YP_004389453.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans K601]
gi|317116592|gb|ADU99080.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans BC]
gi|329311522|gb|AEB85937.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans K601]
Length = 102
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 53/85 (62%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
+ RL+V L+ DE L + F+ FG + +KV+ +R TGRSKGFGFV S EA+ A
Sbjct: 2 NNRLYVGNLAYSVRDESLVQQFSQFGAVTSAKVMMERDTGRSKGFGFVEMASGAEAQEAI 61
Query: 93 EGMNAKYLDGWVIFVDPAKSREARP 117
G++ K +DG + V+ A+ EARP
Sbjct: 62 NGLHGKSVDGRALTVNVARPMEARP 86
>gi|217071940|gb|ACJ84330.1| unknown [Medicago truncatula]
Length = 211
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T+D KL++ F FG+L +KV+ D+ +GRS+GFGFV+Y + E A +
Sbjct: 8 RCFVGGLAWSTSDRKLRDTFEKFGKLTEAKVVVDKFSGRSRGFGFVTYDEKKVMEDAIDA 67
Query: 95 MNAKYLDGWVIFVDPAK 111
MN LDG I VD A+
Sbjct: 68 MNGIDLDGRTITVDRAQ 84
>gi|145233965|ref|XP_001400355.1| glycine-rich RNA-binding protein 2 [Aspergillus niger CBS 513.88]
gi|134057294|emb|CAK37908.1| unnamed protein product [Aspergillus niger]
gi|350635078|gb|EHA23440.1| hypothetical protein ASPNIDRAFT_197860 [Aspergillus niger ATCC
1015]
Length = 116
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LF+ GL+ TTDE L+E F+ +G + + V+ D T RS+GFGFV + S EA+ A
Sbjct: 3 KLFIGGLAWHTTDETLREGFSQYGTIEEAIVVKDHDTHRSRGFGFVRFASDVEADAAMNA 62
Query: 95 MNAKYLDGWVIFVDPAKSREARP 117
MN + DG VI VD K+ E+RP
Sbjct: 63 MNNQEFDGRVIRVD--KASESRP 83
>gi|358059890|dbj|GAA94320.1| hypothetical protein E5Q_00970 [Mixia osmundae IAM 14324]
Length = 173
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 62/107 (57%), Gaps = 7/107 (6%)
Query: 9 RALSSGSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITD 68
R +SSGS S +S+ S +LFV GL+ TTD+ L AF+ +G++ V+ D
Sbjct: 3 RTVSSGSYTQAS-------SSSGMSQKLFVGGLAWATTDDSLFSAFSQYGEVTDCIVMKD 55
Query: 69 RATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREA 115
R TGRS+GFGFV+ + AE+A E +N LDG + VD A R A
Sbjct: 56 RETGRSRGFGFVTMSDPAAAEQAIEALNNGDLDGRQVRVDKAADRGA 102
>gi|296421441|ref|XP_002840273.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636488|emb|CAZ84464.1| unnamed protein product [Tuber melanosporum]
Length = 91
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 49/80 (61%)
Query: 34 PRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERARE 93
+LF+ GL+ T D+ L++ F FG + + V+ DR TGRS+GFGFV Y+S EEA A +
Sbjct: 2 AKLFIGGLAWHTDDDALRQKFQEFGNVEEAVVVKDRDTGRSRGFGFVRYSSDEEATAAMD 61
Query: 94 GMNAKYLDGWVIFVDPAKSR 113
MN DG I VD A R
Sbjct: 62 NMNDVEFDGRRIRVDKASDR 81
>gi|6273331|gb|AAF06329.1|AF191305_1 glycine-rich RNA binding protein, partial [Medicago sativa]
Length = 105
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 52/78 (66%)
Query: 34 PRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERARE 93
R FV GL+ T ++ L++AF+ +G++V SK+I DR TGRS+GFGFV++ + + E
Sbjct: 6 DRCFVGGLAWATDNDALEKAFSQYGEIVDSKIINDRETGRSRGFGFVTFANEKSMNDVIE 65
Query: 94 GMNAKYLDGWVIFVDPAK 111
MN + LDG I V+ A+
Sbjct: 66 AMNGQDLDGRNITVNQAQ 83
>gi|168704267|ref|ZP_02736544.1| RNA-binding region RNP-1 [Gemmata obscuriglobus UQM 2246]
Length = 137
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 53/80 (66%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V LS TD L+E F P+G +V ++VI DR TGRSKGFGFV S +EA+ A G
Sbjct: 4 KLYVGNLSWGVTDAMLQEMFTPYGAVVSAQVIMDRDTGRSKGFGFVEMGSDQEAQAAISG 63
Query: 95 MNAKYLDGWVIFVDPAKSRE 114
M+ + ++G + V+ A+ +E
Sbjct: 64 MHGQVIEGRPLTVNEARPKE 83
>gi|356550257|ref|XP_003543504.1| PREDICTED: cold-inducible RNA-binding protein-like [Glycine max]
Length = 86
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 52/79 (65%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV LS TT E+LK+ F+PFG + + + D T R KGFGFVS+ S EAE+A +
Sbjct: 8 KLFVHRLSFYTTQEQLKKLFSPFGLVTQADLALDPITKRPKGFGFVSFKSEIEAEKACKA 67
Query: 95 MNAKYLDGWVIFVDPAKSR 113
MN + ++G +I V+PA +
Sbjct: 68 MNGRIVNGRLILVEPANEK 86
>gi|154279360|ref|XP_001540493.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150412436|gb|EDN07823.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 149
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 51/91 (56%)
Query: 34 PRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERARE 93
+LF+ GL+ TTD+ L+ F +G + + V+ DR T RS+GFGFV + S EA+ A
Sbjct: 2 SKLFIGGLAWHTTDDTLRAGFEKYGTIEEAIVVKDRDTNRSRGFGFVRFASDAEADAAMN 61
Query: 94 GMNAKYLDGWVIFVDPAKSREARPPPPPPYP 124
M+ + DG VI VD A R + P Y
Sbjct: 62 AMSNQEFDGRVIRVDKASDRSSAPRNEGGYH 92
>gi|241766569|ref|ZP_04764426.1| RNP-1 like RNA-binding protein [Acidovorax delafieldii 2AN]
gi|241363173|gb|EER58764.1| RNP-1 like RNA-binding protein [Acidovorax delafieldii 2AN]
Length = 116
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 50/84 (59%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V L D L++AF FG + +KV+ +R TGRSKGFGFV S EA+ A G
Sbjct: 4 KLYVGNLPYSVRDSDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAING 63
Query: 95 MNAKYLDGWVIFVDPAKSREARPP 118
MN + L G I V+ A+ E RPP
Sbjct: 64 MNGQPLGGRSIVVNEARPMEPRPP 87
>gi|225562488|gb|EEH10767.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
gi|325092417|gb|EGC45727.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
Length = 136
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 51/91 (56%)
Query: 34 PRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERARE 93
+LF+ GL+ TTD+ L+ F +G + + V+ DR T RS+GFGFV + S EA+ A
Sbjct: 2 SKLFIGGLAWHTTDDTLRAGFEKYGTIEEAIVVKDRDTNRSRGFGFVRFASDAEADAAMN 61
Query: 94 GMNAKYLDGWVIFVDPAKSREARPPPPPPYP 124
M+ + DG VI VD A R + P Y
Sbjct: 62 AMSNQEFDGRVIRVDKASDRSSAPRNEGGYH 92
>gi|83032218|gb|ABB97027.1| unknown [Brassica rapa]
Length = 208
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 55/83 (66%), Gaps = 9/83 (10%)
Query: 20 SQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGF 79
S L SIR ++S ++FV G+S T + L+EAF+ +G++V +K+I DR TGRS+GF F
Sbjct: 23 SMLQSIR---CMSSSKIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAF 79
Query: 80 VSYTSIEEAERAREGMNAKYLDG 102
V++TS EEA NA LDG
Sbjct: 80 VTFTSTEEAS------NAMQLDG 96
>gi|449507141|ref|XP_004162944.1| PREDICTED: 40S ribosomal protein S19, mitochondrial-like [Cucumis
sativus]
Length = 175
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 52/81 (64%), Gaps = 5/81 (6%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S RL++SGLS TT+E L+ AF FGQLV ++ DR R +GF F+ Y S EE+++A
Sbjct: 88 STRLYISGLSFRTTEESLRNAFKSFGQLVEVNLVMDRLANRPRGFAFLRYASEEESQKAI 147
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
EGM+ G FV+ AKSR
Sbjct: 148 EGMH-----GKGDFVEVAKSR 163
>gi|71668509|gb|AAZ38826.1| aggrecan promoter binding protein [Gallus gallus]
Length = 172
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 95 MNAKYLDGWVIFVDPA-KSREARP 117
MN K +DG I VD A KS E R
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSENRS 90
>gi|227206222|dbj|BAH57166.1| AT2G21660 [Arabidopsis thaliana]
Length = 99
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 46/68 (67%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L+ AFA +G ++ SK+I DR TGRS+GFGFV++ + + A EG
Sbjct: 9 RCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEG 68
Query: 95 MNAKYLDG 102
MN + LDG
Sbjct: 69 MNGQDLDG 76
>gi|197128626|gb|ACH45124.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
Length = 171
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 95 MNAKYLDGWVIFVDPA-KSREARP 117
MN K +DG I VD A KS E R
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSENRS 90
>gi|255945479|ref|XP_002563507.1| Pc20g10130 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588242|emb|CAP86342.1| Pc20g10130 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 95
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 56/79 (70%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+++V LS T+DE L++AF FGQ+V S V+ DR TGRS+GFGFV+Y+S EEAE A
Sbjct: 3 KIYVGNLSWHTSDESLRQAFGEFGQIVDSIVMVDRETGRSRGFGFVTYSSAEEAEAAINA 62
Query: 95 MNAKYLDGWVIFVDPAKSR 113
+N + LDG I V+ A +R
Sbjct: 63 LNEQDLDGRRIRVNLANAR 81
>gi|350538255|ref|NP_001232562.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128621|gb|ACH45119.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
Length = 171
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 95 MNAKYLDGWVIFVDPA-KSREARP 117
MN K +DG I VD A KS E R
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSENRS 90
>gi|150007582|ref|YP_001302325.1| RNA-binding protein rbpA [Parabacteroides distasonis ATCC 8503]
gi|255013892|ref|ZP_05286018.1| putative RNA-binding protein rbpA [Bacteroides sp. 2_1_7]
gi|298375526|ref|ZP_06985483.1| glycine-rich RNA-binding protein 8 (Protein CCR1) [Bacteroides sp.
3_1_19]
gi|410101874|ref|ZP_11296802.1| hypothetical protein HMPREF0999_00574 [Parabacteroides sp. D25]
gi|423331931|ref|ZP_17309715.1| hypothetical protein HMPREF1075_01728 [Parabacteroides distasonis
CL03T12C09]
gi|149936006|gb|ABR42703.1| putative RNA-binding protein rbpA [Parabacteroides distasonis ATCC
8503]
gi|298268026|gb|EFI09682.1| glycine-rich RNA-binding protein 8 (Protein CCR1) [Bacteroides sp.
3_1_19]
gi|409229772|gb|EKN22644.1| hypothetical protein HMPREF1075_01728 [Parabacteroides distasonis
CL03T12C09]
gi|409239672|gb|EKN32456.1| hypothetical protein HMPREF0999_00574 [Parabacteroides sp. D25]
Length = 123
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 52/81 (64%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L++S LS +DE L+ FA +G++ +KVI DR TGRS+GFGFV + E A++A E +
Sbjct: 3 LYISNLSYNISDEDLRLLFADYGEITSAKVIMDRETGRSRGFGFVELSDDELAKKAIEEL 62
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N DG VI + A+ RE R
Sbjct: 63 NQASYDGKVINITEARPREDR 83
>gi|302762759|ref|XP_002964801.1| hypothetical protein SELMODRAFT_406315 [Selaginella moellendorffii]
gi|300167034|gb|EFJ33639.1| hypothetical protein SELMODRAFT_406315 [Selaginella moellendorffii]
Length = 127
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 58/93 (62%)
Query: 31 LTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAER 90
+ + +L+V+GL+ D L+ AF FG ++ +KV+T+ TGRSKGFGFV++ +EA+
Sbjct: 17 MRACKLYVNGLAWGVDDLSLRGAFEEFGDVIDTKVMTNPDTGRSKGFGFVTFKREDEAKE 76
Query: 91 AREGMNAKYLDGWVIFVDPAKSREARPPPPPPY 123
A E M+ K G I VD AK+++ PP Y
Sbjct: 77 ALESMDGKDFAGRSIRVDYAKTQKEMQQNPPSY 109
>gi|357473263|ref|XP_003606916.1| Glycine-rich RNA binding protein [Medicago truncatula]
gi|355507971|gb|AES89113.1| Glycine-rich RNA binding protein [Medicago truncatula]
Length = 190
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 51/78 (65%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T + L++AF+ FG++ SKVI DR TGRS+GFGFV++ + A E
Sbjct: 9 RCFVGGLAWATDSQALEQAFSKFGEITDSKVINDRETGRSRGFGFVTFAEEKSMRDAIEE 68
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN + +DG I V+ A+S
Sbjct: 69 MNGQDIDGRNITVNEAQS 86
>gi|161408091|dbj|BAF94149.1| cold-inducible RNA binding protein [Alligator mississippiensis]
Length = 165
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 95 MNAKYLDGWVIFVDPA-KSREARP 117
MN K +DG I VD A KS E R
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSENRS 90
>gi|396471623|ref|XP_003838913.1| hypothetical protein LEMA_P025860.1 [Leptosphaeria maculans JN3]
gi|312215482|emb|CBX95434.1| hypothetical protein LEMA_P025860.1 [Leptosphaeria maculans JN3]
Length = 164
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 50/80 (62%)
Query: 34 PRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERARE 93
+LF+ GL+ T D+ L++ F FGQ+ + V+ DR TGRS+GFGFV Y + EA+ A +
Sbjct: 2 SKLFIGGLAWHTDDQALRQKFEEFGQVEEAVVVKDRDTGRSRGFGFVRYANDAEADAAMQ 61
Query: 94 GMNAKYLDGWVIFVDPAKSR 113
+N + DG I VD A R
Sbjct: 62 ALNNEEFDGRRIRVDKASDR 81
>gi|319765042|ref|YP_004128979.1| rnp-1 like RNA-binding protein [Alicycliphilus denitrificans BC]
gi|330827234|ref|YP_004390537.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans K601]
gi|317119603|gb|ADV02092.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans BC]
gi|329312606|gb|AEB87021.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans K601]
Length = 144
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 51/84 (60%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V L D+ L++AF FG + +KV+ +R TGRSKGFGFV S +A+ A G
Sbjct: 4 KLYVGNLPYSVRDQDLEQAFGQFGVVTSAKVMMERDTGRSKGFGFVEMGSDADAQAAING 63
Query: 95 MNAKYLDGWVIFVDPAKSREARPP 118
MN + L G I V+ A+ E RPP
Sbjct: 64 MNGQSLGGRSIVVNEARPMEPRPP 87
>gi|395005503|ref|ZP_10389380.1| RRM domain-containing RNA-binding protein, partial [Acidovorax sp.
CF316]
gi|394316556|gb|EJE53277.1| RRM domain-containing RNA-binding protein, partial [Acidovorax sp.
CF316]
Length = 110
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 50/84 (59%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V L D L++AF FG + +KV+ +R TGRSKGFGFV S EA+ A G
Sbjct: 4 KLYVGNLPYSVRDSDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDPEAQAAING 63
Query: 95 MNAKYLDGWVIFVDPAKSREARPP 118
MN + L G I V+ A+ E RPP
Sbjct: 64 MNGQPLGGRSIVVNEARPMEPRPP 87
>gi|358367775|dbj|GAA84393.1| glycine-rich RNA-binding protein [Aspergillus kawachii IFO 4308]
Length = 117
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LF+ GL+ TTD+ L+E F+ +G + + V+ D T RS+GFGFV + S EA+ A
Sbjct: 3 KLFIGGLAWHTTDDTLREGFSQYGTIEEAIVVKDHDTHRSRGFGFVRFASDAEADAAMNA 62
Query: 95 MNAKYLDGWVIFVDPAKSREARP 117
MN + DG VI VD K+ E+RP
Sbjct: 63 MNNQEFDGRVIRVD--KASESRP 83
>gi|348550387|ref|XP_003461013.1| PREDICTED: LOW QUALITY PROTEIN: cold-inducible RNA-binding
protein-like [Cavia porcellus]
Length = 173
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 51/76 (67%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LF+ GLS T ++ L+E F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 7 KLFIGGLSFDTNEQSLEEVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 95 MNAKYLDGWVIFVDPA 110
MN K +DG I VD A
Sbjct: 67 MNGKSVDGRQIRVDQA 82
>gi|326918654|ref|XP_003205603.1| PREDICTED: LOW QUALITY PROTEIN: cold-inducible RNA-binding
protein-like [Meleagris gallopavo]
Length = 170
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 95 MNAKYLDGWVIFVDPA-KSREARP 117
MN K +DG I VD A KS E R
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSENRS 90
>gi|444721742|gb|ELW62457.1| Polyadenylate-binding protein 4-like protein [Tupaia chinensis]
Length = 370
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DE+L+E F+ +G+ + KV+TD +G+SKGFGFVS+ + E A++A E M
Sbjct: 192 VYIKNFGDDMDDERLREVFSKYGKTLSVKVMTD-PSGKSKGFGFVSFDNHEAAQKAVEEM 250
Query: 96 NAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSE 130
N K ++G +IFV A+ + R EQQ E
Sbjct: 251 NGKDINGQLIFVGRAQKKVERQAELKQMFEQQKRE 285
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L R ++ L E F+ FG+++ SKV++D SKG+ FV + + A+RA E M
Sbjct: 100 VFIKNLDRSIDNKTLYEHFSAFGKILSSKVMSDDQG--SKGYAFVHFQNQSAADRAIEEM 157
Query: 96 NAKYLDGWVIFVDPAKSREARPPP 119
N K L +FV K+R+ R
Sbjct: 158 NGKLLKDCKVFVGRFKNRKDREAE 181
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L++ L DEKL++ F+ FG + KV+ + G+SKGFG + ++S EEA +A
Sbjct: 294 KLYIKNLDDTIDDEKLRKEFSSFGSISRVKVMQEE--GQSKGFGLICFSSPEEATKAMTE 351
Query: 95 MNAKYL 100
MN + L
Sbjct: 352 MNGQIL 357
>gi|197128622|gb|ACH45120.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
Length = 171
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 51/76 (67%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T +E L++ F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 7 KLFVGGLSFDTNEESLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 95 MNAKYLDGWVIFVDPA 110
MN K +DG I VD A
Sbjct: 67 MNGKSVDGRQIRVDQA 82
>gi|297802026|ref|XP_002868897.1| hypothetical protein ARALYDRAFT_490700 [Arabidopsis lyrata subsp.
lyrata]
gi|297314733|gb|EFH45156.1| hypothetical protein ARALYDRAFT_490700 [Arabidopsis lyrata subsp.
lyrata]
Length = 164
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 48/77 (62%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L+ F+ FG ++ SK+I DR TGRS+GFGFV++ + A E
Sbjct: 7 RCFVGGLAWATQDHDLERTFSQFGDVLDSKIINDRETGRSRGFGFVTFKDEKAMRDAIEE 66
Query: 95 MNAKYLDGWVIFVDPAK 111
MN K LDG I V+ A+
Sbjct: 67 MNGKELDGRTITVNEAQ 83
>gi|294461052|gb|ADE76094.1| unknown [Picea sitchensis]
Length = 150
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 77/135 (57%), Gaps = 9/135 (6%)
Query: 1 MAFASSFR---RALSSGSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPF 57
M S+F R ++ ++ L +L + +S+ + +LFV GLS T ++ L++AF+ +
Sbjct: 1 MVLVSAFHCLFRGITPNTNRLIGRLALV--HSSGLNKKLFVGGLSFDTNEKVLRDAFSLY 58
Query: 58 GQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREARP 117
G+++ +VI +RA+G SKGFGFV + S +A A + M+ + LDG I V+ A +R +
Sbjct: 59 GEILEVRVIINRASGLSKGFGFVQFASETDAVNALKEMDGQSLDGRNIRVNFANTRARQD 118
Query: 118 PPPP----PYPEQQP 128
PP P P P
Sbjct: 119 SAPPKAVVPDPGLNP 133
>gi|258564224|ref|XP_002582857.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237908364|gb|EEP82765.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 146
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 51/81 (62%)
Query: 34 PRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERARE 93
+LF+ GL+ TTDE L+E F+ +G + + V+ DR T RS+GFGFV + S EA+ A
Sbjct: 2 SKLFIGGLAWHTTDETLREGFSKYGTIEEAIVVKDRDTNRSRGFGFVRFASEAEADAAMN 61
Query: 94 GMNAKYLDGWVIFVDPAKSRE 114
M+ + DG +I VD A R+
Sbjct: 62 AMSNQEFDGRMIRVDKAADRQ 82
>gi|449494871|ref|XP_004159670.1| PREDICTED: cold-inducible RNA-binding protein B-like [Cucumis
sativus]
Length = 95
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 56/84 (66%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
LF+S LS TT E+LK F+PFG + +++I D T R KGFGFV++ S EA++A + M
Sbjct: 9 LFISRLSSYTTLERLKNLFSPFGSISEARLIRDPKTERPKGFGFVTFQSPAEAKKALKAM 68
Query: 96 NAKYLDGWVIFVDPAKSREARPPP 119
+ + +DG +IFV+ AK+ + P
Sbjct: 69 DGRIVDGRLIFVEFAKTEKHGVDP 92
>gi|260825257|ref|XP_002607583.1| hypothetical protein BRAFLDRAFT_71461 [Branchiostoma floridae]
gi|229292931|gb|EEN63593.1| hypothetical protein BRAFLDRAFT_71461 [Branchiostoma floridae]
Length = 183
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 51/79 (64%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS TT E L+ F+ +G++ KVITDR TGRS+GFGFV++ + +A A++
Sbjct: 9 KLFVGGLSWDTTSEGLESTFSEYGEITDCKVITDRETGRSRGFGFVTFANDSDAANAKKC 68
Query: 95 MNAKYLDGWVIFVDPAKSR 113
M+ LD I VD A +
Sbjct: 69 MDGTELDSRQIRVDYASKK 87
>gi|121607153|ref|YP_994960.1| RNP-1 like RNA-binding protein [Verminephrobacter eiseniae EF01-2]
gi|121551793|gb|ABM55942.1| RNP-1 like RNA-binding protein [Verminephrobacter eiseniae EF01-2]
Length = 175
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 50/84 (59%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V L D L++AF FG + +KV+ +R TGRSKGFGFV S EA+ A G
Sbjct: 4 KLYVGNLPYSVRDGDLEQAFGQFGAVASAKVMMERDTGRSKGFGFVEMGSDAEAQAAING 63
Query: 95 MNAKYLDGWVIFVDPAKSREARPP 118
MN + L G I V+ A+ E RPP
Sbjct: 64 MNGQPLGGRSIVVNEARPMEPRPP 87
>gi|407941455|ref|YP_006857096.1| RNP-1 like RNA-binding protein [Acidovorax sp. KKS102]
gi|407899249|gb|AFU48458.1| RNP-1 like RNA-binding protein [Acidovorax sp. KKS102]
Length = 188
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 50/84 (59%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V L D L++AF FG + +KV+ +R TGRSKGFGFV S EA+ A G
Sbjct: 4 KLYVGNLPYSVRDGDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAING 63
Query: 95 MNAKYLDGWVIFVDPAKSREARPP 118
MN + L G I V+ A+ E RPP
Sbjct: 64 MNGQPLGGRSIVVNEARPMEPRPP 87
>gi|389741761|gb|EIM82949.1| RNA-binding domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 145
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 56/81 (69%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S +++V LS TTD+ L++AF+ FG ++ S V+ DR TGRS+GFGFV++ + EEA+ A
Sbjct: 2 SAKVYVGNLSWNTTDDTLRQAFSEFGAILDSIVMRDRETGRSRGFGFVTFGTPEEADAAI 61
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
+N + LDG I V+ A ++
Sbjct: 62 NNLNEQELDGRRIRVNLANAK 82
>gi|374373120|ref|ZP_09630780.1| RNP-1 like RNA-binding protein [Niabella soli DSM 19437]
gi|373234093|gb|EHP53886.1| RNP-1 like RNA-binding protein [Niabella soli DSM 19437]
Length = 88
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 52/82 (63%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++VS L +D+ L+E F+ FGQ+ +KVI DR TG+S+GFGFV S+ +A A + +
Sbjct: 3 MYVSNLGFHASDDDLRELFSSFGQVSSAKVIMDRTTGKSRGFGFVEMGSVSDATLAMKEL 62
Query: 96 NAKYLDGWVIFVDPAKSREARP 117
+ K +DG I V AK RE R
Sbjct: 63 DGKDVDGRRIAVSAAKEREERS 84
>gi|378727388|gb|EHY53847.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 179
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 49/78 (62%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LF+ GL+ TTDE L E F+ FG + + V+ DR T RS+GFGFV + + EA+ A +
Sbjct: 3 KLFIGGLAWHTTDETLYEGFSQFGNIEEAVVVKDRDTNRSRGFGFVRFATKAEADEAMQR 62
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN DG +I VD A+
Sbjct: 63 MNNTQFDGRLIRVDHAQD 80
>gi|256839767|ref|ZP_05545276.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|256738697|gb|EEU52022.1| conserved hypothetical protein [Parabacteroides sp. D13]
Length = 123
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 52/81 (64%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L++S LS +D L++ FA +G++ +KVI DR TGRS+GFGFV + E A++A E +
Sbjct: 3 LYISNLSYNISDADLRQLFADYGEITSAKVIMDRETGRSRGFGFVELSDDELAKKAIEEL 62
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N DG VI + A+ RE R
Sbjct: 63 NQASYDGKVINITEARPREDR 83
>gi|390432205|gb|AFL91694.1| glycine-rich RNA binding protein [Raphanus sativus var.
raphanistroides]
Length = 153
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 50/78 (64%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L+ AF+ +G ++ SK+I DR TGRS+GFGFV++ + A E
Sbjct: 9 RCFVGGLAWATDDRALETAFSQYGDVLDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEA 68
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN + LDG I V+ A+S
Sbjct: 69 MNGQDLDGRSITVNEAQS 86
>gi|365091634|ref|ZP_09328989.1| RNP-1 like RNA-binding protein [Acidovorax sp. NO-1]
gi|363415945|gb|EHL23069.1| RNP-1 like RNA-binding protein [Acidovorax sp. NO-1]
Length = 192
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 50/84 (59%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V L D L++AF FG + +KV+ +R TGRSKGFGFV S EA+ A G
Sbjct: 4 KLYVGNLPYSVRDGDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAISG 63
Query: 95 MNAKYLDGWVIFVDPAKSREARPP 118
MN + L G I V+ A+ E RPP
Sbjct: 64 MNGQPLGGRSIVVNEARPMEPRPP 87
>gi|345870896|ref|ZP_08822845.1| RNP-1 like RNA-binding protein [Thiorhodococcus drewsii AZ1]
gi|343921050|gb|EGV31774.1| RNP-1 like RNA-binding protein [Thiorhodococcus drewsii AZ1]
Length = 90
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 51/81 (62%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++V LS TTD L+EAFAPFG++ +I+D+ TG+SKGFGFV + A+ A +G+
Sbjct: 3 IYVGNLSYNTTDSDLREAFAPFGEVAQVNLISDKFTGQSKGFGFVEMPNNSHADAAIKGL 62
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N L G I V+ AK R R
Sbjct: 63 NGTDLQGRSIKVNEAKPRSDR 83
>gi|407929404|gb|EKG22234.1| hypothetical protein MPH_00413 [Macrophomina phaseolina MS6]
Length = 159
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 48/79 (60%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LF+ GL+ T D L++ F FGQ+ + V+ DR TGRS+GFGFV +T +AE A +
Sbjct: 3 KLFIGGLAWHTDDATLRQKFEEFGQVEEAVVVKDRDTGRSRGFGFVRFTQESDAEAAIQA 62
Query: 95 MNAKYLDGWVIFVDPAKSR 113
MN DG I VD A R
Sbjct: 63 MNNVEFDGRTIRVDKASDR 81
>gi|359479548|ref|XP_003632289.1| PREDICTED: cold-inducible RNA-binding protein-like [Vitis vinifera]
gi|296084877|emb|CBI28286.3| unnamed protein product [Vitis vinifera]
Length = 111
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 63/107 (58%), Gaps = 4/107 (3%)
Query: 4 ASSFRRALSSGSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYS 63
+ +F R S +L SQL R + LFV G+S TT++ L EAF+ FG++V +
Sbjct: 8 SDTFLRFSSLNPYLLSSQLIFCRG----IASTLFVKGISFSTTEKTLAEAFSQFGEVVEA 63
Query: 64 KVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPA 110
K+I D+ R KGF +V++T +EAE+A MN K +DG + VD A
Sbjct: 64 KIIMDKRKLRPKGFAYVTFTREDEAEKALTEMNGKVVDGRTVLVDYA 110
>gi|351731832|ref|ZP_08949523.1| RNP-1 like RNA-binding protein [Acidovorax radicis N35]
Length = 177
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 50/84 (59%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V L D L++AF FG + +KV+ +R TGRSKGFGFV + EA+ A G
Sbjct: 4 KLYVGNLPYSVRDSDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGNDAEAQAAING 63
Query: 95 MNAKYLDGWVIFVDPAKSREARPP 118
MN + L G I V+ A+ E RPP
Sbjct: 64 MNGQPLGGRSIVVNEARPMEPRPP 87
>gi|146328793|ref|YP_001209360.1| RNA recognition motif-containing protein [Dichelobacter nodosus
VCS1703A]
gi|146232263|gb|ABQ13241.1| RNA recognition motif protein [Dichelobacter nodosus VCS1703A]
Length = 95
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 53/82 (64%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++V LS TT+++L+ AF+ FG + + +I DR +GRSKGFGFV E A++A E +
Sbjct: 4 IYVGNLSYRTTEDELRNAFSQFGDVQNASIIKDRDSGRSKGFGFVEMPDAEAAKKAIESL 63
Query: 96 NAKYLDGWVIFVDPAKSREARP 117
N K L G + ++ A+ RE RP
Sbjct: 64 NDKDLGGRNLKINEARPREMRP 85
>gi|71897051|ref|NP_001026518.1| cold-inducible RNA-binding protein [Gallus gallus]
gi|53128363|emb|CAG31295.1| hypothetical protein RCJMB04_4m1 [Gallus gallus]
Length = 190
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 95 MNAKYLDGWVIFVDPA-KSREARP 117
MN K +DG I VD A KS E R
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSENRS 90
>gi|1395193|dbj|BAA12064.1| RNA-binding protein RZ-1 [Nicotiana sylvestris]
gi|1435062|dbj|BAA06012.1| RNA binding protein RZ-1 [Nicotiana sylvestris]
Length = 209
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 48/77 (62%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R F+ LS T+D LK+AF FG LV +KV+ D+ +GRS+GFGFV++ E A E
Sbjct: 7 RCFIGNLSWSTSDRGLKDAFEKFGNLVDAKVVLDKFSGRSRGFGFVTFDEKRAMEDAIEA 66
Query: 95 MNAKYLDGWVIFVDPAK 111
MN LDG I VD A+
Sbjct: 67 MNGVDLDGRDITVDKAQ 83
>gi|443895166|dbj|GAC72512.1| hypothetical protein PANT_7d00134 [Pseudozyma antarctica T-34]
Length = 301
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 52/81 (64%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+++V LS TTD+ L AF+ FGQL V+ DR TGRS+GFGFV++ + EA+ A
Sbjct: 4 KVYVGNLSWNTTDDSLAHAFSAFGQLTDYIVMKDRETGRSRGFGFVTFATQGEADAAIAA 63
Query: 95 MNAKYLDGWVIFVDPAKSREA 115
+N + LDG I V+ A SR A
Sbjct: 64 LNEQELDGRRIRVNMANSRPA 84
>gi|440893983|gb|ELR46563.1| Polyadenylate-binding protein 4-like protein [Bos grunniens mutus]
Length = 370
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DE+L E F+ +G+ + KV+TD ++G+SKGFGFVS+ S E A+RA E M
Sbjct: 192 VYIKNFGDEMDDERLNEVFSKYGKTLSVKVMTD-SSGKSKGFGFVSFDSHEAAKRAVEEM 250
Query: 96 NAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSE 130
N K ++G ++FV A+ + R EQ E
Sbjct: 251 NGKDINGQLLFVGRAQKKAERQAELKQMFEQLKHE 285
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 34 PRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERARE 93
+L++ L DEKL+ F+ FG + KV+ + GRSKGFG + ++S EEA +A
Sbjct: 293 AKLYIKNLDETIDDEKLRREFSSFGSISRVKVMQEE--GRSKGFGLICFSSAEEATKAMT 350
Query: 94 GMNAKYL 100
MN + L
Sbjct: 351 EMNGRIL 357
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L R ++ L E F+ FG+++ SKV++D S+G+ FV + + A+RA E M
Sbjct: 100 VFIKNLDRSIDNKTLYEHFSAFGKILSSKVMSDDHG--SRGYAFVHFQNQIAADRAIEEM 157
Query: 96 NAKYLDGWVIFVDPAKSREARPPP 119
N L +FV KSR+ R
Sbjct: 158 NGALLKDCRLFVGRFKSRKDREAE 181
>gi|345567860|gb|EGX50762.1| hypothetical protein AOL_s00054g848 [Arthrobotrys oligospora ATCC
24927]
Length = 130
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%)
Query: 34 PRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERARE 93
+LF+ GLS T D +L++ F FG + + V+ DR TGRS+GFGFV +++ +EA A+E
Sbjct: 2 SKLFIGGLSYGTDDNRLRQKFEEFGVVEDAIVVKDRDTGRSRGFGFVRFSNDDEATAAQE 61
Query: 94 GMNAKYLDGWVIFVDPAKSR 113
MN DG I VD A R
Sbjct: 62 AMNDAEFDGRRIRVDKASDR 81
>gi|449507320|ref|XP_004162998.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 139
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T L++AF+ +G++V +K+++DR TGRS+GFGFV++ E A E
Sbjct: 9 RCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEA 68
Query: 95 MNAKYLDGWVIFVDPAK 111
MN LDG I V+ A+
Sbjct: 69 MNGHILDGRNITVNEAQ 85
>gi|449462238|ref|XP_004148848.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
gi|449507318|ref|XP_004162997.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 141
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T L++AF+ +G++V +K+++DR TGRS+GFGFV++ E A E
Sbjct: 9 RCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEA 68
Query: 95 MNAKYLDGWVIFVDPAK 111
MN LDG I V+ A+
Sbjct: 69 MNGHILDGRNITVNEAQ 85
>gi|449462236|ref|XP_004148847.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
gi|449507315|ref|XP_004162996.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 144
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T L++AF+ +G++V +K+++DR TGRS+GFGFV++ E A E
Sbjct: 9 RCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEA 68
Query: 95 MNAKYLDGWVIFVDPAK 111
MN LDG I V+ A+
Sbjct: 69 MNGHILDGRNITVNEAQ 85
>gi|449462234|ref|XP_004148846.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 156
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T L++AF+ +G++V +K+++DR TGRS+GFGFV++ E A E
Sbjct: 9 RCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEA 68
Query: 95 MNAKYLDGWVIFVDPAK 111
MN LDG I V+ A+
Sbjct: 69 MNGHILDGRNITVNEAQ 85
>gi|449462232|ref|XP_004148845.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
gi|449507311|ref|XP_004162995.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 171
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T L++AF+ +G++V +K+++DR TGRS+GFGFV++ E A E
Sbjct: 9 RCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEA 68
Query: 95 MNAKYLDGWVIFVDPAK 111
MN LDG I V+ A+
Sbjct: 69 MNGHILDGRNITVNEAQ 85
>gi|422295561|gb|EKU22860.1| glycine-rich rna-binding protein 4 [Nannochloropsis gaditana
CCMP526]
Length = 186
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 51/80 (63%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV LS T L+EAF PFG++V+S VI +R TG+S+GFGFV Y EA+ A
Sbjct: 31 KLFVGNLSFRTESAALREAFEPFGRIVFSTVIENRETGQSRGFGFVVYEQKHEADAAISR 90
Query: 95 MNAKYLDGWVIFVDPAKSRE 114
M+ LDG + V+ A+ RE
Sbjct: 91 MDNAELDGRTLRVNFARPRE 110
>gi|402903547|ref|XP_003914625.1| PREDICTED: cold-inducible RNA-binding protein [Papio anubis]
Length = 199
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 34 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 93
Query: 95 MNAKYLDGWVIFVDPA-KSREARP 117
MN K +DG I VD A KS + R
Sbjct: 94 MNGKSVDGRQIRVDQAGKSSDNRS 117
>gi|262196624|ref|YP_003267833.1| RNP-1 like RNA-binding protein [Haliangium ochraceum DSM 14365]
gi|262079971|gb|ACY15940.1| RNP-1 like RNA-binding protein [Haliangium ochraceum DSM 14365]
Length = 125
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 51/81 (62%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S ++FV GLS T D L+ AF FG + +KVITDR TGRS+GFGFV++ +A A
Sbjct: 2 SNKIFVGGLSWDTDDSSLRAAFERFGAVTEAKVITDRDTGRSRGFGFVTFAESGQAAAAI 61
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
E M+ LDG I V+ A+ R
Sbjct: 62 EEMDGVELDGRNIRVNEAQER 82
>gi|46139099|ref|XP_391240.1| hypothetical protein FG11064.1 [Gibberella zeae PH-1]
Length = 127
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 56/81 (69%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V LS TTDE L++ F+ FG++ S ++ DR TGR++GFGFV++++ E+A A +
Sbjct: 3 KLYVGNLSWNTTDETLRQTFSEFGEVTDSIIMRDRDTGRARGFGFVTFSTEEQATAAVDA 62
Query: 95 MNAKYLDGWVIFVDPAKSREA 115
+N + LDG I V+ A +R A
Sbjct: 63 LNEQELDGRRIRVNVANARPA 83
>gi|410949903|ref|XP_003981656.1| PREDICTED: cold-inducible RNA-binding protein [Felis catus]
Length = 172
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 95 MNAKYLDGWVIFVDPA-KSREARP 117
MN K +DG I VD A KS + R
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRS 90
>gi|125548231|gb|EAY94053.1| hypothetical protein OsI_15830 [Oryza sativa Indica Group]
Length = 113
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 46/64 (71%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
RLF+ GLS+ T++ L EAF+ +GQ++ + ++TD+ T R KGFGFV + S E A +A+E
Sbjct: 38 RLFIGGLSQFATEDSLAEAFSQYGQVLEATIVTDKMTNRPKGFGFVKFASEEAANKAKEE 97
Query: 95 MNAK 98
MN K
Sbjct: 98 MNGK 101
>gi|90077754|dbj|BAE88557.1| unnamed protein product [Macaca fascicularis]
Length = 172
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 95 MNAKYLDGWVIFVDPA-KSREARP 117
MN K +DG I VD A KS + R
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRS 90
>gi|20975278|dbj|BAB92956.1| cold inducible RNA-binding protein beta [Hyla japonica]
Length = 166
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 52/82 (63%)
Query: 29 STLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEA 88
S+ +LFV GLS T ++ L++ F +GQ+ V+ DR T RS+GFGFV++ + E+A
Sbjct: 2 SSSDEGKLFVGGLSFDTEEQNLEQVFGKYGQISEVVVVKDRETQRSRGFGFVTFENPEDA 61
Query: 89 ERAREGMNAKYLDGWVIFVDPA 110
+ A E MN K +DG I VD A
Sbjct: 62 KDAMEAMNGKSVDGRQIRVDQA 83
>gi|225435044|ref|XP_002284323.1| PREDICTED: cold-inducible RNA-binding protein [Vitis vinifera]
gi|297746123|emb|CBI16179.3| unnamed protein product [Vitis vinifera]
Length = 112
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 64/102 (62%), Gaps = 5/102 (4%)
Query: 11 LSSGSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRA 70
+ + ++LK + R++S +FV+ LS TT+E+L E F+PFG + +++I D
Sbjct: 7 MKTAGNLLKPWFSARRFSS-----EIFVTRLSGYTTNEELIEMFSPFGVVTQARLIKDPK 61
Query: 71 TGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKS 112
T R KGFGFV + S +AE+A + MN + + G +IFV+ AK+
Sbjct: 62 TQRPKGFGFVKFESEVDAEKALKAMNGRIVRGRLIFVEIAKT 103
>gi|406944721|gb|EKD76419.1| hypothetical protein ACD_43C00118G0001 [uncultured bacterium]
Length = 84
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 54/82 (65%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
+ LFV G++ +TD+ L+EAF G +V +K+I D+ TGRS+GFGFV ++ EEA+ A
Sbjct: 2 NTNLFVGGIAFKSTDDTLREAFMQAGNVVSAKIIMDKMTGRSRGFGFVEMSTPEEAQAAI 61
Query: 93 EGMNAKYLDGWVIFVDPAKSRE 114
+ + K LDG I V A+ RE
Sbjct: 62 QMWDGKELDGRRIAVKEAQPRE 83
>gi|22725943|gb|AAN04953.1| Putative RNA-binding protein [Oryza sativa Japonica Group]
Length = 147
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 45/59 (76%)
Query: 40 GLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAK 98
G+S T D+ LKEAFA +G+++ ++VI DR TGRS+GFGFV+YTS +EA A GM+ K
Sbjct: 67 GISYGTDDQSLKEAFANYGEVIEARVIVDRTTGRSRGFGFVTYTSTDEAAAAITGMDGK 125
>gi|351699548|gb|EHB02467.1| Cold-inducible RNA-binding protein, partial [Heterocephalus glaber]
Length = 167
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 95 MNAKYLDGWVIFVDPA-KSREARP 117
MN K +DG I VD A KS ++R
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDSRS 90
>gi|332525684|ref|ZP_08401833.1| RNA-binding region RNP-1 [Rubrivivax benzoatilyticus JA2]
gi|332109243|gb|EGJ10166.1| RNA-binding region RNP-1 [Rubrivivax benzoatilyticus JA2]
Length = 145
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 46/68 (67%)
Query: 47 DEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIF 106
D+ L++AFA FG + +KV+ DR TGRSKGFGFV S EA+ A GMN + L+G +
Sbjct: 3 DDSLQQAFAQFGTVTSAKVMMDRETGRSKGFGFVEMGSDAEAQAAINGMNGQSLEGRAVV 62
Query: 107 VDPAKSRE 114
V+ A+ RE
Sbjct: 63 VNEARPRE 70
>gi|334326698|ref|XP_001365067.2| PREDICTED: cold-inducible RNA-binding protein-like [Monodelphis
domestica]
Length = 172
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 51/76 (67%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 95 MNAKYLDGWVIFVDPA 110
MN K +DG I VD A
Sbjct: 67 MNGKSVDGRQIRVDQA 82
>gi|395513325|ref|XP_003760877.1| PREDICTED: cold-inducible RNA-binding protein [Sarcophilus
harrisii]
Length = 172
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 51/76 (67%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 95 MNAKYLDGWVIFVDPA 110
MN K +DG I VD A
Sbjct: 67 MNGKSVDGRQIRVDQA 82
>gi|449435011|ref|XP_004135289.1| PREDICTED: cold-inducible RNA-binding protein B-like isoform 1
[Cucumis sativus]
gi|449435013|ref|XP_004135290.1| PREDICTED: cold-inducible RNA-binding protein B-like isoform 2
[Cucumis sativus]
Length = 89
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 54/77 (70%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
LF+S LS TT E+LK F+PFG + +++I D T R KGFGFV++ S EA++A + M
Sbjct: 9 LFISRLSSYTTLERLKNLFSPFGSISEARLIRDPKTERPKGFGFVTFQSPAEAKKALKAM 68
Query: 96 NAKYLDGWVIFVDPAKS 112
+ + +DG +IFV+ AK+
Sbjct: 69 DGRIVDGRLIFVEFAKT 85
>gi|417408518|gb|JAA50808.1| Putative rna-binding protein seb4 rrm superfamily, partial
[Desmodus rotundus]
Length = 193
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 28 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 87
Query: 95 MNAKYLDGWVIFVDPA-KSREAR 116
MN K +DG I VD A KS + R
Sbjct: 88 MNGKSVDGRQIRVDQAGKSSDNR 110
>gi|302756609|ref|XP_002961728.1| hypothetical protein SELMODRAFT_140819 [Selaginella moellendorffii]
gi|300170387|gb|EFJ36988.1| hypothetical protein SELMODRAFT_140819 [Selaginella moellendorffii]
Length = 130
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 54/85 (63%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
+ +LF+ GL+ D L+ AFA +G++ ++VI DR TGRS+GFGFV++ + EA+ A
Sbjct: 9 ASKLFIGGLAWGVDDGTLRTAFANYGEVTEARVIMDRETGRSRGFGFVTFENDNEAKAAV 68
Query: 93 EGMNAKYLDGWVIFVDPAKSREARP 117
+GM+ L G I VD A R + P
Sbjct: 69 QGMDGHELGGRSIRVDYASDRPSAP 93
>gi|408398205|gb|EKJ77338.1| hypothetical protein FPSE_02416 [Fusarium pseudograminearum CS3096]
Length = 128
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 56/81 (69%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V LS TTD+ L++ F+ FG++ S ++ DR TGR++GFGFV++++ E+A A +
Sbjct: 3 KLYVGNLSWNTTDDTLRQTFSEFGEVTDSIIMRDRETGRARGFGFVTFSTEEQANAAVDA 62
Query: 95 MNAKYLDGWVIFVDPAKSREA 115
+N + LDG I V+ A +R A
Sbjct: 63 LNEQELDGRRIRVNVANARPA 83
>gi|425765484|gb|EKV04163.1| hypothetical protein PDIP_88470 [Penicillium digitatum Pd1]
gi|425778342|gb|EKV16473.1| hypothetical protein PDIG_20660 [Penicillium digitatum PHI26]
Length = 136
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 49/82 (59%)
Query: 34 PRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERARE 93
+LF+ GLS T D L++ F FG + + V+ DR TGRS+GFGFV +++ EEA A
Sbjct: 2 SKLFIGGLSWNTDDNSLRQRFEEFGVVEDATVVKDRDTGRSRGFGFVRFSTDEEATAAMN 61
Query: 94 GMNAKYLDGWVIFVDPAKSREA 115
MN + DG I VD A R A
Sbjct: 62 AMNNQEFDGRQIRVDKATERAA 83
>gi|22328599|ref|NP_193122.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|48310472|gb|AAT41827.1| At4g13860 [Arabidopsis thaliana]
gi|332657937|gb|AEE83337.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 87
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 50/70 (71%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
+ R++V LS TTD+ L+EAF+ +G +V + V+ DR T RS+GFGFV+Y+S EAE A
Sbjct: 2 ATRVYVGNLSPTTTDDMLREAFSGYGNVVDAIVMRDRYTDRSRGFGFVTYSSHSEAEAAV 61
Query: 93 EGMNAKYLDG 102
GM+ K L+G
Sbjct: 62 SGMDGKELNG 71
>gi|21750187|dbj|BAC03738.1| unnamed protein product [Homo sapiens]
Length = 687
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 65/121 (53%), Gaps = 15/121 (12%)
Query: 5 SSFRRALSSGSSILKSQLGSIRYNSTLTSPR------------LFVSGLSRLTTDEKLKE 52
+SF A + +S K ++G L PR LFV GLS TT+E LKE
Sbjct: 508 ASFEDAKEALNSCNKREIGGRAIRLELQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKE 567
Query: 53 AFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKS 112
+F V ++++TDR TG SKGFGFV + S E+A+ A+E M +DG + +D AK
Sbjct: 568 SF---DGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKP 624
Query: 113 R 113
+
Sbjct: 625 K 625
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 12/108 (11%)
Query: 28 NSTLT--SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSI 85
NST + S L +S LS T+E L+E F + + KV ++ G+SKG+ F+ + S
Sbjct: 455 NSTWSGESKTLVLSNLSYSATEETLQEVFE---KATFIKVPQNQ-NGKSKGYAFIEFASF 510
Query: 86 EEAERAREGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
E+A+ A N + + G I + E + P P QPS+ F
Sbjct: 511 EDAKEALNSCNKREIGGRAIRL------ELQGPRGSPNARSQPSKTLF 552
>gi|30585341|gb|AAP36943.1| Homo sapiens cold inducible RNA binding protein [synthetic
construct]
gi|61371531|gb|AAX43684.1| cold inducible RNA binding protein [synthetic construct]
gi|61371536|gb|AAX43685.1| cold inducible RNA binding protein [synthetic construct]
Length = 173
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 95 MNAKYLDGWVIFVDPA-KSREARP 117
MN K +DG I VD A KS + R
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRS 90
>gi|355755275|gb|EHH59022.1| hypothetical protein EGM_09015 [Macaca fascicularis]
Length = 202
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 95 MNAKYLDGWVIFVDPA-KSREARP 117
MN K +DG I VD A KS + R
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRS 90
>gi|73987338|ref|XP_868602.1| PREDICTED: cold-inducible RNA-binding protein isoform 4 [Canis
lupus familiaris]
Length = 219
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 54 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 113
Query: 95 MNAKYLDGWVIFVDPA-KSREAR 116
MN K +DG I VD A KS + R
Sbjct: 114 MNGKSVDGRQIRVDQAGKSSDNR 136
>gi|333917516|ref|YP_004491248.1| RNP-1 like RNA-binding protein [Delftia sp. Cs1-4]
gi|333747716|gb|AEF92893.1| RNP-1 like RNA-binding protein [Delftia sp. Cs1-4]
Length = 179
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 52/84 (61%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V L D L++AF+ FG + ++V+ +R TGRSKGFGFV S EA+ A +G
Sbjct: 4 KLYVGNLPYGVRDNDLEQAFSQFGAVTSARVMMERDTGRSKGFGFVEMGSDAEAQAAVQG 63
Query: 95 MNAKYLDGWVIFVDPAKSREARPP 118
MN + L G + V+ A+ E RPP
Sbjct: 64 MNGQPLGGRSLVVNEARPMEPRPP 87
>gi|325279880|ref|YP_004252422.1| RNP-1 like RNA-binding protein [Odoribacter splanchnicus DSM 20712]
gi|324311689|gb|ADY32242.1| RNP-1 like RNA-binding protein [Odoribacter splanchnicus DSM 20712]
Length = 99
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++SGLS TTD L E F+ +G++ +K+I+DR TGRS+GFGFV T+ E ++A + +
Sbjct: 3 IYISGLSYGTTDADLNELFSEYGEISSAKIISDRETGRSRGFGFVEMTNDTEGQKAIDEL 62
Query: 96 NAKYLDGWVIFVDPAKSREARPP 118
N D VI V A+ R R
Sbjct: 63 NGAEYDHKVIAVSIARPRTERQS 85
>gi|160901478|ref|YP_001567060.1| RNP-1 like RNA-binding protein [Delftia acidovorans SPH-1]
gi|160367062|gb|ABX38675.1| RNP-1 like RNA-binding protein [Delftia acidovorans SPH-1]
Length = 176
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 52/84 (61%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V L D L++AF+ FG + ++V+ +R TGRSKGFGFV S EA+ A +G
Sbjct: 4 KLYVGNLPYGVRDNDLEQAFSQFGAVTSARVMMERDTGRSKGFGFVEMGSDAEAQAAVQG 63
Query: 95 MNAKYLDGWVIFVDPAKSREARPP 118
MN + L G + V+ A+ E RPP
Sbjct: 64 MNGQPLGGRSLVVNEARPMEPRPP 87
>gi|410343221|gb|JAA40557.1| cold inducible RNA binding protein [Pan troglodytes]
Length = 203
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 38 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 97
Query: 95 MNAKYLDGWVIFVDPA-KSREAR 116
MN K +DG I VD A KS + R
Sbjct: 98 MNGKSVDGRQIRVDQAGKSSDNR 120
>gi|347819854|ref|ZP_08873288.1| RNP-1 like RNA-binding protein [Verminephrobacter aporrectodeae
subsp. tuberculatae At4]
Length = 168
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 50/84 (59%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V L D L++AF FG + +KV+ +R TGRSKGFGFV S EA+ A G
Sbjct: 4 KLYVGNLPYSVRDGDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAITG 63
Query: 95 MNAKYLDGWVIFVDPAKSREARPP 118
MN + L G I V+ A+ E RPP
Sbjct: 64 MNGQPLGGRSIVVNEARPMEPRPP 87
>gi|4502847|ref|NP_001271.1| cold-inducible RNA-binding protein [Homo sapiens]
gi|197102572|ref|NP_001124692.1| cold-inducible RNA-binding protein [Pongo abelii]
gi|386782231|ref|NP_001248245.1| cold-inducible RNA-binding protein [Macaca mulatta]
gi|397465267|ref|XP_003804430.1| PREDICTED: cold-inducible RNA-binding protein [Pan paniscus]
gi|426386441|ref|XP_004059693.1| PREDICTED: cold-inducible RNA-binding protein isoform 1 [Gorilla
gorilla gorilla]
gi|5921786|sp|Q14011.1|CIRBP_HUMAN RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18
hnRNP; AltName: Full=Glycine-rich RNA-binding protein
CIRP
gi|75070980|sp|Q5RF83.1|CIRBP_PONAB RecName: Full=Cold-inducible RNA-binding protein; AltName:
Full=Glycine-rich RNA-binding protein CIRP
gi|1060893|dbj|BAA11212.1| CIRP [Homo sapiens]
gi|2541973|gb|AAC51787.1| DNA damage-inducible RNA binding protein [Homo sapiens]
gi|2924760|gb|AAC04895.1| CIRP [Homo sapiens]
gi|12653269|gb|AAH00403.1| Cold inducible RNA binding protein [Homo sapiens]
gi|12654167|gb|AAH00901.1| Cold inducible RNA binding protein [Homo sapiens]
gi|30583259|gb|AAP35874.1| cold inducible RNA binding protein [Homo sapiens]
gi|55725420|emb|CAH89574.1| hypothetical protein [Pongo abelii]
gi|60654971|gb|AAX32049.1| cold inducible RNA binding protein [synthetic construct]
gi|67970531|dbj|BAE01608.1| unnamed protein product [Macaca fascicularis]
gi|119589926|gb|EAW69520.1| cold inducible RNA binding protein, isoform CRA_a [Homo sapiens]
gi|119589929|gb|EAW69523.1| cold inducible RNA binding protein, isoform CRA_a [Homo sapiens]
gi|157928054|gb|ABW03323.1| cold inducible RNA binding protein [synthetic construct]
gi|157928769|gb|ABW03670.1| cold inducible RNA binding protein [synthetic construct]
gi|197692151|dbj|BAG70039.1| cold inducible RNA binding protein [Homo sapiens]
gi|197692397|dbj|BAG70162.1| cold inducible RNA binding protein [Homo sapiens]
gi|261860266|dbj|BAI46655.1| cold inducible RNA binding protein [synthetic construct]
gi|343958578|dbj|BAK63144.1| cold-inducible RNA-binding protein [Pan troglodytes]
gi|383415637|gb|AFH31032.1| cold-inducible RNA-binding protein [Macaca mulatta]
gi|384940732|gb|AFI33971.1| cold-inducible RNA-binding protein [Macaca mulatta]
gi|410224774|gb|JAA09606.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410260066|gb|JAA17999.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410289136|gb|JAA23168.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410343217|gb|JAA40555.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410343219|gb|JAA40556.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410343223|gb|JAA40558.1| cold inducible RNA binding protein [Pan troglodytes]
Length = 172
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 95 MNAKYLDGWVIFVDPA-KSREARP 117
MN K +DG I VD A KS + R
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRS 90
>gi|355702927|gb|EHH29418.1| hypothetical protein EGK_09841 [Macaca mulatta]
Length = 202
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 95 MNAKYLDGWVIFVDPA-KSREARP 117
MN K +DG I VD A KS + R
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRS 90
>gi|342882418|gb|EGU83098.1| hypothetical protein FOXB_06359 [Fusarium oxysporum Fo5176]
Length = 113
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 51/78 (65%)
Query: 34 PRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERARE 93
+LFV GL+ TT + L+ F+ FG++ + V+TDR TGRS+GFGFV+++S EEA A E
Sbjct: 2 SKLFVGGLAWATTSDTLRAKFSEFGEVTDAIVMTDRETGRSRGFGFVTFSSQEEASAAIE 61
Query: 94 GMNAKYLDGWVIFVDPAK 111
MN + +G I V A
Sbjct: 62 AMNEQEFEGRQIRVSEAN 79
>gi|327290660|ref|XP_003230040.1| PREDICTED: cold-inducible RNA-binding protein-like [Anolis
carolinensis]
Length = 176
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 95 MNAKYLDGWVIFVDPA-KSREARP 117
MN K +DG I VD A KS + R
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRS 90
>gi|119589928|gb|EAW69522.1| cold inducible RNA binding protein, isoform CRA_c [Homo sapiens]
gi|119589930|gb|EAW69524.1| cold inducible RNA binding protein, isoform CRA_c [Homo sapiens]
Length = 297
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 95 MNAKYLDGWVIFVDPA-KSREAR 116
MN K +DG I VD A KS + R
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNR 89
>gi|395856757|ref|XP_003800785.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Otolemur garnettii]
Length = 359
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DEKLKE F+ +G+ + KV+TD ++G+SKGFGFVS+ + E A++A + M
Sbjct: 163 VYIKNFGEDMDDEKLKEVFSKYGRTLSVKVMTD-SSGKSKGFGFVSFDNHEAAKKAVKEM 221
Query: 96 NAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSE 130
N K ++G +IFV A+ + R EQ E
Sbjct: 222 NGKDINGQLIFVGRAQKKVERQAELKQMFEQLKKE 256
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L++ L DEKL++ F+ FG + KV+ + G+SKGFG + ++S+EEA +A
Sbjct: 265 KLYIKNLDDTIDDEKLRKEFSSFGSISRVKVMQE--GGQSKGFGLICFSSLEEATKAMTE 322
Query: 95 MNAKYL 100
MN L
Sbjct: 323 MNGHIL 328
>gi|432865704|ref|XP_004070572.1| PREDICTED: embryonic polyadenylate-binding protein-like [Oryzias
latipes]
Length = 624
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ TDEKLKEAF+ FG+ + +V+ D GRS+GFGFV+Y E+A++A + M
Sbjct: 193 IYIKNFGDNLTDEKLKEAFSAFGKTLSVRVMRDE-KGRSRGFGFVNYAHHEDAQKAVDEM 251
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K ++G +I+V A+ R R
Sbjct: 252 NGKEMNGKIIYVGRAQKRLER 272
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V L DE+L++ F+P+G + +KV+T+ G+SKGFGFV ++S EEA +A M
Sbjct: 296 LYVKNLDDSIDDERLRKEFSPYGTITSAKVMTE--AGQSKGFGFVCFSSPEEATKAVTEM 353
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N + + ++V A+ RE R
Sbjct: 354 NGRIVATKPLYVALAQRREER 374
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ + ++ L + F+ FG ++ KV+ D SKG+GFV + + E A RA E M
Sbjct: 101 IFIKNIDDSIDNKALYDTFSAFGNILSCKVVCDERG--SKGYGFVHFETQEAANRAIETM 158
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N L+ +FV KSR+ R
Sbjct: 159 NGMLLNDRKVFVGHFKSRKER 179
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V L T+ L + F+P G +V +V D T RS G+ ++++ +AE A + M
Sbjct: 13 LYVGDLHPDVTEAMLYQKFSPAGPIVSIRVCRDIITRRSLGYAYINFQQPADAECALDTM 72
Query: 96 NAKYLDGWVIFV-----DPA 110
N + G I + DPA
Sbjct: 73 NYDVIKGRPIRIMWSQRDPA 92
>gi|67525063|ref|XP_660593.1| hypothetical protein AN2989.2 [Aspergillus nidulans FGSC A4]
gi|40744384|gb|EAA63560.1| hypothetical protein AN2989.2 [Aspergillus nidulans FGSC A4]
Length = 118
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 51/81 (62%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LF+ GL+ TTD+ L+E F+ +G + + V+ DR T RS+GFGFV + S EA+ A
Sbjct: 3 KLFIGGLAWHTTDDVLREGFSRYGTIEEAVVVKDRDTNRSRGFGFVRFASEPEADAAMGA 62
Query: 95 MNAKYLDGWVIFVDPAKSREA 115
MN + DG +I VD A R A
Sbjct: 63 MNNQEFDGRIIRVDKASERPA 83
>gi|20257709|gb|AAM16020.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 49/78 (62%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T L AF+ +G+++ SK+I DR T RS+GFGFV+++ A EG
Sbjct: 18 RCFVGGLAWATDXHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXXAMRSAIEG 77
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN K LDG I V+ A+S
Sbjct: 78 MNGKELDGRNITVNEAQS 95
>gi|299531903|ref|ZP_07045303.1| RNA-binding protein RNP-3 [Comamonas testosteroni S44]
gi|298720078|gb|EFI61035.1| RNA-binding protein RNP-3 [Comamonas testosteroni S44]
Length = 162
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 52/84 (61%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V L D L++AF+ FG + ++V+ +R TGRSKGFGFV S EA+ A +G
Sbjct: 4 KLYVGNLPYGVRDNDLEQAFSQFGAVASARVMMERDTGRSKGFGFVEMASEAEAQAAIQG 63
Query: 95 MNAKYLDGWVIFVDPAKSREARPP 118
MN + L G + V+ A+ E RPP
Sbjct: 64 MNGQPLGGRSLVVNEARPMEPRPP 87
>gi|264680852|ref|YP_003280762.1| RNA-binding protein RNP-3 [Comamonas testosteroni CNB-2]
gi|262211368|gb|ACY35466.1| RNA-binding protein RNP-3 [Comamonas testosteroni CNB-2]
Length = 164
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 52/84 (61%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V L D L++AF+ FG + ++V+ +R TGRSKGFGFV S EA+ A +G
Sbjct: 4 KLYVGNLPYGVRDNDLEQAFSQFGAVASARVMMERDTGRSKGFGFVEMASEAEAQAAIQG 63
Query: 95 MNAKYLDGWVIFVDPAKSREARPP 118
MN + L G + V+ A+ E RPP
Sbjct: 64 MNGQPLGGRSLVVNEARPMEPRPP 87
>gi|399023681|ref|ZP_10725736.1| RRM domain-containing RNA-binding protein [Chryseobacterium sp.
CF314]
gi|398082380|gb|EJL73134.1| RRM domain-containing RNA-binding protein [Chryseobacterium sp.
CF314]
Length = 121
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 55/82 (67%), Gaps = 1/82 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+FVS ++ T + +L++ FA FG++ +K+ITD+ TGRS+GFGF+ EE ++A + +
Sbjct: 3 IFVSNINYATKEYELQDLFAEFGEVSSAKIITDKETGRSRGFGFIEMND-EEGQQAIDSL 61
Query: 96 NAKYLDGWVIFVDPAKSREARP 117
N K +G V+ V AK RE +P
Sbjct: 62 NQKEFNGKVLNVSEAKPREEKP 83
>gi|418528344|ref|ZP_13094294.1| RNA-binding protein RNP-3 [Comamonas testosteroni ATCC 11996]
gi|371454720|gb|EHN67722.1| RNA-binding protein RNP-3 [Comamonas testosteroni ATCC 11996]
Length = 163
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 52/84 (61%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V L D L++AF+ FG + ++V+ +R TGRSKGFGFV S EA+ A +G
Sbjct: 4 KLYVGNLPYGVRDNDLEQAFSQFGAVASARVMMERDTGRSKGFGFVEMASEAEAQAAIQG 63
Query: 95 MNAKYLDGWVIFVDPAKSREARPP 118
MN + L G + V+ A+ E RPP
Sbjct: 64 MNGQPLGGRSLVVNEARPMEPRPP 87
>gi|194385818|dbj|BAG65284.1| unnamed protein product [Homo sapiens]
Length = 263
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 51/76 (67%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 95 MNAKYLDGWVIFVDPA 110
MN K +DG I VD A
Sbjct: 67 MNGKSVDGRQIRVDQA 82
>gi|426386443|ref|XP_004059694.1| PREDICTED: cold-inducible RNA-binding protein isoform 2 [Gorilla
gorilla gorilla]
gi|426386445|ref|XP_004059695.1| PREDICTED: cold-inducible RNA-binding protein isoform 3 [Gorilla
gorilla gorilla]
Length = 168
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 95 MNAKYLDGWVIFVDPA-KSREARP 117
MN K +DG I VD A KS + R
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRS 90
>gi|358055062|dbj|GAA98831.1| hypothetical protein E5Q_05519 [Mixia osmundae IAM 14324]
Length = 400
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 51/88 (57%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L VSGLS T D L++ FA FG++ S ++ D T S+GF FV+ S +EA A +GM
Sbjct: 57 LHVSGLSNRTEDRDLEDCFAKFGRVQKSAIMRDPHTKESRGFAFVTMESADEAAAAIDGM 116
Query: 96 NAKYLDGWVIFVDPAKSREARPPPPPPY 123
NA L G +I V A+ AR P P Y
Sbjct: 117 NATELHGRMISVALARRGRARTPTPGAY 144
>gi|259486065|tpe|CBF83611.1| TPA: glycine-rich RNA-binding protein, putative (AFU_orthologue;
AFUA_3G08580) [Aspergillus nidulans FGSC A4]
Length = 128
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 51/81 (62%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LF+ GL+ TTD+ L+E F+ +G + + V+ DR T RS+GFGFV + S EA+ A
Sbjct: 3 KLFIGGLAWHTTDDVLREGFSRYGTIEEAVVVKDRDTNRSRGFGFVRFASEPEADAAMGA 62
Query: 95 MNAKYLDGWVIFVDPAKSREA 115
MN + DG +I VD A R A
Sbjct: 63 MNNQEFDGRIIRVDKASERPA 83
>gi|358055061|dbj|GAA98830.1| hypothetical protein E5Q_05518 [Mixia osmundae IAM 14324]
Length = 383
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 51/88 (57%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L VSGLS T D L++ FA FG++ S ++ D T S+GF FV+ S +EA A +GM
Sbjct: 40 LHVSGLSNRTEDRDLEDCFAKFGRVQKSAIMRDPHTKESRGFAFVTMESADEAAAAIDGM 99
Query: 96 NAKYLDGWVIFVDPAKSREARPPPPPPY 123
NA L G +I V A+ AR P P Y
Sbjct: 100 NATELHGRMISVALARRGRARTPTPGAY 127
>gi|119589931|gb|EAW69525.1| cold inducible RNA binding protein, isoform CRA_d [Homo sapiens]
Length = 311
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 19 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 78
Query: 95 MNAKYLDGWVIFVDPA-KSREAR 116
MN K +DG I VD A KS + R
Sbjct: 79 MNGKSVDGRQIRVDQAGKSSDNR 101
>gi|301776322|ref|XP_002923559.1| PREDICTED: cold-inducible RNA-binding protein-like [Ailuropoda
melanoleuca]
Length = 172
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 95 MNAKYLDGWVIFVDPA-KSREARP 117
MN K +DG I VD A KS + R
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRS 90
>gi|33359635|gb|AAQ17065.1| nucleolin 3 [Cyprinus carpio]
gi|33949944|gb|AAQ55855.1| nucleolin [Cyprinus carpio]
Length = 637
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
LFV GLS TTD LKEAF V ++++TDR TG SKGFGFV + S E+ + A+E M
Sbjct: 490 LFVKGLSEDTTDHSLKEAFDG---AVNARIVTDRDTGSSKGFGFVDFDSEEDCKAAKEAM 546
Query: 96 NAKYLDGWVIFVDPAK 111
+ +DG + +D AK
Sbjct: 547 DDGEIDGNRVTLDYAK 562
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 8/82 (9%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKV---ITDRATGRSKGFGFVSYTSIEEAERAR 92
LF+ L+ +++K A A F +SK I D G +K FG+V + S EE ++A
Sbjct: 222 LFLGNLNHDKDFDEIKSAIAKF----FSKEGLEIQDVRVGGTKKFGYVDFASEEELQKAL 277
Query: 93 EGMNAKYLDGWVIFVDPAKSRE 114
G+N K L G + +D AKS+E
Sbjct: 278 -GLNGKKLMGQPVKLDKAKSKE 298
>gi|357122439|ref|XP_003562923.1| PREDICTED: uncharacterized protein LOC100844345 [Brachypodium
distachyon]
Length = 206
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R F+ LS TTDE LK+AF FG + +KV+ D+ +GRS+GF FV++ ++ E A E
Sbjct: 8 RCFIGNLSWSTTDESLKDAFRKFGNVTEAKVVLDKFSGRSRGFAFVTFDEKKDMEAAIED 67
Query: 95 MNAKYLDGWVIFVDPAK 111
MN LDG I VD A+
Sbjct: 68 MNGLDLDGRAITVDKAQ 84
>gi|20975276|dbj|BAB92955.1| cold inducible RNA-binding protein alpha [Hyla japonica]
Length = 162
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 52/82 (63%)
Query: 29 STLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEA 88
S+ +LFV GLS T ++ L++ F +GQ+ V+ DR T RS+GFGFV++ + E+A
Sbjct: 2 SSSDEGKLFVGGLSFDTEEQSLEQVFGKYGQISEVVVVKDRETKRSRGFGFVTFENPEDA 61
Query: 89 ERAREGMNAKYLDGWVIFVDPA 110
+ A E MN K +DG I VD A
Sbjct: 62 KDAMEAMNGKSVDGRQIRVDQA 83
>gi|417397313|gb|JAA45690.1| Putative rasgap sh3 binding protein rasputin [Desmodus rotundus]
Length = 218
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 95 MNAKYLDGWVIFVDPA-KSREARP 117
MN K +DG I VD A KS + R
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRS 90
>gi|197128619|gb|ACH45117.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128620|gb|ACH45118.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128623|gb|ACH45121.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128625|gb|ACH45123.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128627|gb|ACH45125.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128628|gb|ACH45126.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
Length = 171
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 51/76 (67%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 95 MNAKYLDGWVIFVDPA 110
MN K +DG I VD A
Sbjct: 67 MNGKSVDGRQIRVDQA 82
>gi|431922216|gb|ELK19307.1| Cold-inducible RNA-binding protein [Pteropus alecto]
Length = 220
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 95 MNAKYLDGWVIFVDPA-KSREAR 116
MN K +DG I VD A KS + R
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNR 89
>gi|426229493|ref|XP_004008825.1| PREDICTED: cold-inducible RNA-binding protein [Ovis aries]
Length = 171
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 95 MNAKYLDGWVIFVDPA-KSREARP 117
MN K +DG I VD A KS + R
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRS 90
>gi|402217291|gb|EJT97372.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 167
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 54/81 (66%), Gaps = 3/81 (3%)
Query: 38 VSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNA 97
+ LS T D+ L+ AF+ FGQ++ V+ DR +GRS+GFGFV++ + +EA+ A +G+N
Sbjct: 17 IGNLSWNTNDDTLRSAFSQFGQVLDCIVMKDRESGRSRGFGFVTFGTSQEAQAAIDGLNE 76
Query: 98 KYLDGWVIFVDPAKSREARPP 118
+ LDG I V+ A ARPP
Sbjct: 77 QDLDGRRIRVNLAN---ARPP 94
>gi|189347593|ref|YP_001944122.1| RNP-1 like RNA-binding protein [Chlorobium limicola DSM 245]
gi|189341740|gb|ACD91143.1| RNP-1 like RNA-binding protein [Chlorobium limicola DSM 245]
Length = 90
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 50/88 (56%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ L T+ L+E F FG++ + VITD+ TGRSKGFGFV + EA A +
Sbjct: 3 IYIGNLDYNVTESDLRETFGEFGEVSNASVITDKFTGRSKGFGFVEMPNNAEASEAISSL 62
Query: 96 NAKYLDGWVIFVDPAKSREARPPPPPPY 123
N L+G I V+ AK RE RP P Y
Sbjct: 63 NDSDLNGRTIKVNEAKPREQRPISRPRY 90
>gi|346978360|gb|EGY21812.1| glycine-rich RNA-binding protein [Verticillium dahliae VdLs.17]
Length = 175
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LF+ GL+ TT+E L+ F FG + + V+ DR TGRS+GFGFV Y+ E+A++A +
Sbjct: 3 KLFIGGLAWHTTEETLRSRFEEFGAVDEAVVVKDRDTGRSRGFGFVRYSQDEDAQKAIDA 62
Query: 95 MNAKYLDGWVIFVDPA 110
MN DG I VD A
Sbjct: 63 MNNVEFDGRTIRVDRA 78
>gi|441656594|ref|XP_003277032.2| PREDICTED: cold-inducible RNA-binding protein [Nomascus leucogenys]
Length = 144
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 95 MNAKYLDGWVIFVDPA-KSREARP 117
MN K +DG I VD A KS + R
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRS 90
>gi|221069836|ref|ZP_03545941.1| RNP-1 like RNA-binding protein [Comamonas testosteroni KF-1]
gi|220714859|gb|EED70227.1| RNP-1 like RNA-binding protein [Comamonas testosteroni KF-1]
Length = 158
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 51/84 (60%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V L D L++AF FG + ++V+ +R TGRSKGFGFV S EA+ A +G
Sbjct: 4 KLYVGNLPYGVRDNDLEQAFGQFGAVASARVMMERDTGRSKGFGFVEMASEAEAQAAIQG 63
Query: 95 MNAKYLDGWVIFVDPAKSREARPP 118
MN + L G + V+ A+ E RPP
Sbjct: 64 MNGQPLGGRSLVVNEARPMEPRPP 87
>gi|46115998|ref|XP_384017.1| hypothetical protein FG03841.1 [Gibberella zeae PH-1]
Length = 1163
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/81 (45%), Positives = 54/81 (66%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S +++V L TTD+ L+ AF +GQ++ S V+ DR TGRS+GFGFV++ S +EAE A
Sbjct: 2 SAKVYVGNLGWNTTDDSLRNAFQDYGQILDSIVMRDRDTGRSRGFGFVTFGSSQEAETAI 61
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
+N + LDG I V+ A +R
Sbjct: 62 ISLNEQELDGRRIKVNLANAR 82
>gi|296232406|ref|XP_002761576.1| PREDICTED: cold-inducible RNA-binding protein [Callithrix jacchus]
Length = 172
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 51/76 (67%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 95 MNAKYLDGWVIFVDPA 110
MN K +DG I VD A
Sbjct: 67 MNGKSVDGRQIRVDQA 82
>gi|119589927|gb|EAW69521.1| cold inducible RNA binding protein, isoform CRA_b [Homo sapiens]
Length = 184
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 19 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 78
Query: 95 MNAKYLDGWVIFVDPA-KSREARP 117
MN K +DG I VD A KS + R
Sbjct: 79 MNGKSVDGRQIRVDQAGKSSDNRS 102
>gi|403308137|ref|XP_003944528.1| PREDICTED: cold-inducible RNA-binding protein isoform 1 [Saimiri
boliviensis boliviensis]
gi|403308139|ref|XP_003944529.1| PREDICTED: cold-inducible RNA-binding protein isoform 2 [Saimiri
boliviensis boliviensis]
Length = 172
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 51/76 (67%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 95 MNAKYLDGWVIFVDPA 110
MN K +DG I VD A
Sbjct: 67 MNGKSVDGRQIRVDQA 82
>gi|73987334|ref|XP_868600.1| PREDICTED: cold-inducible RNA-binding protein isoform 2 [Canis
lupus familiaris]
Length = 185
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 95 MNAKYLDGWVIFVDPA-KSREARP 117
MN K +DG I VD A KS + R
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRS 90
>gi|387018172|gb|AFJ51204.1| Cold-inducible RNA-binding protein-like [Crotalus adamanteus]
Length = 172
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 95 MNAKYLDGWVIFVDPA-KSREARP 117
MN K +DG I VD A KS + R
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRS 90
>gi|62955567|ref|NP_001017797.1| cold inducible RNA binding protein [Danio rerio]
gi|62202782|gb|AAH93299.1| Zgc:112425 [Danio rerio]
gi|63100518|gb|AAH95030.1| Zgc:112425 [Danio rerio]
gi|182889498|gb|AAI65256.1| Zgc:112425 protein [Danio rerio]
Length = 185
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 52/76 (68%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LF+ GLS TT++ L++AF+ +G + V +R T RS+GFGFV++ + ++A+ A EG
Sbjct: 6 KLFIGGLSFDTTEQSLEDAFSKYGVITNVHVARNRETNRSRGFGFVTFENPDDAKDALEG 65
Query: 95 MNAKYLDGWVIFVDPA 110
MN K +DG I VD A
Sbjct: 66 MNGKSVDGRTIRVDEA 81
>gi|388567211|ref|ZP_10153648.1| putative RNA-binding protein rbpB [Hydrogenophaga sp. PBC]
gi|388265594|gb|EIK91147.1| putative RNA-binding protein rbpB [Hydrogenophaga sp. PBC]
Length = 97
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 51/82 (62%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S +L+V L D+ L+ F+ FG + +KV+TDR +GRSKGFGFV S EA+ A
Sbjct: 2 SSKLYVGNLPYSVNDDSLRHNFSEFGNVASAKVMTDRDSGRSKGFGFVEMASEAEAQAAI 61
Query: 93 EGMNAKYLDGWVIFVDPAKSRE 114
G+N + +DG I V+ ++ +E
Sbjct: 62 NGLNGQSVDGRQIVVNVSRPKE 83
>gi|197128630|gb|ACH45128.1| putative cold inducible RNA binding protein variant 2c [Taeniopygia
guttata]
Length = 175
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 51/76 (67%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 95 MNAKYLDGWVIFVDPA 110
MN K +DG I VD A
Sbjct: 67 MNGKSVDGRQIRVDQA 82
>gi|385305672|gb|EIF49630.1| polyadenylate-binding protein [Dekkera bruxellensis AWRI1499]
Length = 655
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
LFV L D KLKE FAP+G++ +KV+T+ A G+S+GFGFV YT EEA RA M
Sbjct: 347 LFVKNLDDTIDDTKLKEEFAPYGKITSAKVMTNDA-GKSRGFGFVCYTKPEEATRAINEM 405
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
+ + + G ++V A+ +E R
Sbjct: 406 HQRMVMGKPLYVALAQRKEVR 426
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L ++ L + F+ FG+++ K+ TD G SKGFGFV Y E A+ A E +
Sbjct: 150 VFIKNLHPDIDNKTLYDTFSTFGKILSCKIATDE-HGHSKGFGFVHYDDAESAKAAIENV 208
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N L+ ++V P R+ R
Sbjct: 209 NGMLLNNMEVYVAPHIPRKDR 229
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++V T+++L+E F +G++ + + TD G+++GFGFV++ EA +A + +
Sbjct: 243 VYVKNFGPEMTEDQLREMFEAYGKVTSTYLPTDN-EGKARGFGFVNFEDHXEAAKAVDAL 301
Query: 96 NAKYLDGW-VIFVDPAKSREAR 116
N K L+G +++V A+ + R
Sbjct: 302 NEKELEGGRILYVGRAQKKRER 323
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERA 91
L+V L T+ L E F+ GQ+ +V B T +S + +V+Y EEAE A
Sbjct: 62 LYVGDLDPSVTESDLYEIFSKVGQVSSIRVCRBAVTKKSLCYAYVNYQKREEAEHA 117
>gi|281341352|gb|EFB16936.1| hypothetical protein PANDA_012739 [Ailuropoda melanoleuca]
Length = 167
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 95 MNAKYLDGWVIFVDPA-KSREARP 117
MN K +DG I VD A KS + R
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRS 90
>gi|90076360|dbj|BAE87860.1| unnamed protein product [Macaca fascicularis]
Length = 207
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 95 MNAKYLDGWVIFVDPA-KSREAR 116
MN K +DG I VD A KS + R
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNR 89
>gi|148699639|gb|EDL31586.1| cold inducible RNA binding protein, isoform CRA_b [Mus musculus]
Length = 176
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 95 MNAKYLDGWVIFVDPA-KSREARP 117
MN K +DG I VD A KS + R
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRS 90
>gi|332531199|ref|ZP_08407112.1| RNP-1 like RNA-binding protein [Hylemonella gracilis ATCC 19624]
gi|332039306|gb|EGI75719.1| RNP-1 like RNA-binding protein [Hylemonella gracilis ATCC 19624]
Length = 131
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 51/84 (60%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V L+ D L++AF FG + +KV+ +R TGRSKGFGFV S EA+ A G
Sbjct: 4 KLYVGNLAYSIRDNDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAING 63
Query: 95 MNAKYLDGWVIFVDPAKSREARPP 118
+N + L G + V+ A+ E RPP
Sbjct: 64 LNGQPLSGRNVVVNEARPMEPRPP 87
>gi|351722320|ref|NP_001236472.1| uncharacterized protein LOC100306540 [Glycine max]
gi|255628821|gb|ACU14755.1| unknown [Glycine max]
Length = 146
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 24 SIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYT 83
+R++S S +LFV+GLS T + L++AF G+++ KVI D TG+S+G+GFV +
Sbjct: 51 CVRHHS---STKLFVTGLSYDTNEPILRDAFGQHGEIIEVKVICDHVTGKSRGYGFVRFV 107
Query: 84 SIEEAERAREGMNAKYLDGWVIFVDPAKSREARPPP 119
S A AR+ MN + LDG I V A E P
Sbjct: 108 SETTAAAARKEMNGQILDGRRIRVSYAHKGERLSLP 143
>gi|82248148|sp|Q9PTX2.1|CIRBP_RANCA RecName: Full=Cold-inducible RNA-binding protein; Short=BFCIRP;
AltName: Full=Glycine-rich RNA-binding protein CIRP
gi|6682989|dbj|BAA88978.1| BFCIRP [Rana catesbeiana]
Length = 164
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 51/81 (62%)
Query: 30 TLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAE 89
+ +LFV GLS T ++ L+ F+ +GQ+ V+ DR T RS+GFGFV++ + E+A+
Sbjct: 2 SCDEGKLFVGGLSFDTDEQCLETVFSKYGQIQEVVVVKDRETKRSRGFGFVTFENCEDAK 61
Query: 90 RAREGMNAKYLDGWVIFVDPA 110
A GMN K +DG I VD A
Sbjct: 62 DAMAGMNGKTVDGRQIRVDQA 82
>gi|78189511|ref|YP_379849.1| RNA recognition motif-containing protein [Chlorobium
chlorochromatii CaD3]
gi|78171710|gb|ABB28806.1| RNA-binding region RNP-1 (RNA recognition motif) [Chlorobium
chlorochromatii CaD3]
Length = 90
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 51/82 (62%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ L+ T+ L++AF FGQ+ + +ITD+ +GRSKGFGFV + EA A M
Sbjct: 3 IYIGNLAYSVTENDLRDAFGQFGQVESASIITDKFSGRSKGFGFVDMPNDSEAREAIGAM 62
Query: 96 NAKYLDGWVIFVDPAKSREARP 117
N K L+G I V+ AK RE RP
Sbjct: 63 NEKELNGRPIKVNEAKPREERP 84
>gi|47271546|ref|NP_112409.2| cold-inducible RNA-binding protein [Rattus norvegicus]
gi|46623308|gb|AAH69219.1| Cold inducible RNA binding protein [Rattus norvegicus]
Length = 172
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 95 MNAKYLDGWVIFVDPA-KSREARP 117
MN K +DG I VD A KS + R
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRS 90
>gi|15238546|ref|NP_200794.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332009860|gb|AED97243.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 157
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 53/77 (68%), Gaps = 5/77 (6%)
Query: 39 SGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAK 98
SGLS TTD+ L++ FAPF +L I D+ T R KGFGF+++ S ++A++A + +N K
Sbjct: 76 SGLSAYTTDQSLRQLFAPFARL-----IKDQQTQRPKGFGFITFESEDDAQKALKALNGK 130
Query: 99 YLDGWVIFVDPAKSREA 115
++G +IFV+ AK EA
Sbjct: 131 IVNGRLIFVETAKEVEA 147
>gi|344307815|ref|XP_003422574.1| PREDICTED: LOW QUALITY PROTEIN: cold-inducible RNA-binding
protein-like [Loxodonta africana]
Length = 169
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 95 MNAKYLDGWVIFVDPA-KSREARP 117
MN K +DG I VD A KS + R
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRS 90
>gi|343472240|emb|CCD15548.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 665
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 57/104 (54%), Gaps = 7/104 (6%)
Query: 18 LKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGF 77
L+S +IR N LFVSGL TD L + FAPFG++ +KV+ D TGRS+G
Sbjct: 269 LESPEDAIRSN-------LFVSGLRHNVTDVGLHDLFAPFGEIESAKVMLDIHTGRSRGI 321
Query: 78 GFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREARPPPPP 121
FV + + +A++A E +N+ +G I V AK A P P
Sbjct: 322 AFVKFAKVSDAQKAAEALNSTAFNGENITVRVAKPNAAYRPGEP 365
>gi|53804863|ref|YP_113486.1| RNA-binding protein [Methylococcus capsulatus str. Bath]
gi|53758624|gb|AAU92915.1| RNA-binding protein [Methylococcus capsulatus str. Bath]
Length = 95
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 52/84 (61%), Gaps = 5/84 (5%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V L+ D L+ FA +G + ++V+ DRATGRS+GFGFV S +EA+ A G
Sbjct: 4 KLYVGNLNYRVGDADLERTFAAYGTVKSAQVVMDRATGRSRGFGFVEMGSDQEAQAAIAG 63
Query: 95 MNAKYLDGWVIFVDPAKSREARPP 118
+N K +DG + V+ EARPP
Sbjct: 64 LNGKEMDGRNLMVN-----EARPP 82
>gi|432101154|gb|ELK29438.1| Cold-inducible RNA-binding protein [Myotis davidii]
Length = 204
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 95 MNAKYLDGWVIFVDPA-KSREARP 117
MN K +DG I VD A KS + R
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRS 90
>gi|6680946|ref|NP_031731.1| cold-inducible RNA-binding protein [Mus musculus]
gi|346644681|ref|NP_001231002.1| cold-inducible RNA-binding protein [Cricetulus griseus]
gi|46395643|sp|P60826.1|CIRBP_CRIGR RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18
hnRNP; AltName: Full=Glycine-rich RNA-binding protein
CIRP
gi|46397383|sp|P60825.1|CIRBP_RAT RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18
hnRNP; AltName: Full=Glycine-rich RNA-binding protein
CIRP
gi|46397384|sp|P60824.1|CIRBP_MOUSE RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18
hnRNP; AltName: Full=Glycine-rich RNA-binding protein
CIRP
gi|1060919|dbj|BAA11213.1| CIRP [Mus musculus]
gi|1783168|dbj|BAA19092.1| CIRP [Rattus norvegicus]
gi|12852647|dbj|BAB29491.1| unnamed protein product [Mus musculus]
gi|34099624|gb|AAQ57122.1| cold-inducible RNA binding protein [Cricetulus griseus]
gi|49522692|gb|AAH75699.1| Cold inducible RNA binding protein [Mus musculus]
gi|74209036|dbj|BAE21245.1| unnamed protein product [Mus musculus]
gi|115345819|gb|ABI95367.1| cold-inducible RNA-binding protein [Cricetulus griseus]
gi|148699640|gb|EDL31587.1| cold inducible RNA binding protein, isoform CRA_c [Mus musculus]
gi|149034580|gb|EDL89317.1| cold inducible RNA binding protein, isoform CRA_c [Rattus
norvegicus]
gi|149034581|gb|EDL89318.1| cold inducible RNA binding protein, isoform CRA_c [Rattus
norvegicus]
Length = 172
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 95 MNAKYLDGWVIFVDPA-KSREARP 117
MN K +DG I VD A KS + R
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRS 90
>gi|224059524|ref|XP_002299889.1| predicted protein [Populus trichocarpa]
gi|222847147|gb|EEE84694.1| predicted protein [Populus trichocarpa]
Length = 88
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 54/80 (67%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFVS LS TT+ +LK F+PFG + ++++ + T R KGFGFV++ S +A +A +
Sbjct: 8 QLFVSRLSSYTTNHELKRLFSPFGAVSEARLVVESKTLRPKGFGFVTFESEADAHKALKA 67
Query: 95 MNAKYLDGWVIFVDPAKSRE 114
MN + ++G +IFV+ AK E
Sbjct: 68 MNGRIVNGRLIFVEVAKDTE 87
>gi|149034582|gb|EDL89319.1| cold inducible RNA binding protein, isoform CRA_d [Rattus
norvegicus]
gi|149034583|gb|EDL89320.1| cold inducible RNA binding protein, isoform CRA_d [Rattus
norvegicus]
Length = 176
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 95 MNAKYLDGWVIFVDPA-KSREARP 117
MN K +DG I VD A KS + R
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRS 90
>gi|149244358|ref|XP_001526722.1| polyadenylate-binding protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|158514320|sp|A5DW14.1|PABP_LODEL RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|146449116|gb|EDK43372.1| polyadenylate-binding protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 661
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 18 LKSQLGSIRYN--STLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSK 75
LK Q ++R S LFV L EKL+E F PFG + SKV+ D A G+SK
Sbjct: 333 LKKQYEAVRLEKLSKYQGVNLFVKNLDEQIDSEKLEEEFKPFGTITSSKVMVDDA-GKSK 391
Query: 76 GFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREAR 116
GFGFV +++ EEA +A MN + ++G ++V A+ ++ R
Sbjct: 392 GFGFVCFSTPEEATKAITEMNQRMVNGKPLYVALAQRKDVR 432
Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
Query: 19 KSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFG 78
+S+L ++ N T ++V + T+++ +E FAPFG++ S + A G+SKGFG
Sbjct: 237 ESKLEEMKANYT----NIYVKNIDLAYTEKEFEELFAPFGKIT-SIYLEKDAEGKSKGFG 291
Query: 79 FVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREAR 116
FV++ E A +A E +N K ++G I+V A+ + R
Sbjct: 292 FVNFEEHEAAAKAVEELNDKEINGQKIYVGRAQKKRER 329
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+F+ L ++ L + F+ FG+++ KV TD G+SK FGFV Y + E A+ A E
Sbjct: 156 NIFIKNLHPAIDNKALHDTFSAFGKILSVKVATDD-LGQSKCFGFVHYETEEAAQAAIES 214
Query: 95 MNAKYLDGWVIFVDPAKSREAR 116
+N L+ ++V S++ R
Sbjct: 215 VNGMLLNDREVYVGKHVSKKDR 236
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%)
Query: 32 TSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERA 91
S L+V L+ + L E F+P GQ+ +V D + +S G+ +V+Y +E+ E+A
Sbjct: 65 NSASLYVGELNPSVNEATLFEIFSPIGQVASIRVCRDAVSKKSLGYAYVNYHKLEDGEKA 124
Query: 92 REGMNAKYLDG 102
E +N ++G
Sbjct: 125 IEELNYTPVEG 135
>gi|375103924|ref|ZP_09750185.1| RRM domain-containing RNA-binding protein [Burkholderiales
bacterium JOSHI_001]
gi|374664655|gb|EHR69440.1| RRM domain-containing RNA-binding protein [Burkholderiales
bacterium JOSHI_001]
Length = 129
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 51/83 (61%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V L+ TD L++ FA G + +KV+ DR +GRSKGFGFV S EEA+ A
Sbjct: 4 KLYVGNLAYSVTDASLQQQFAECGTVTSAKVMMDRDSGRSKGFGFVEMGSHEEAQAAIRK 63
Query: 95 MNAKYLDGWVIFVDPAKSREARP 117
++ +DG + V+ A+ RE RP
Sbjct: 64 LHGASVDGRALVVNEARPREERP 86
>gi|221065733|ref|ZP_03541838.1| RNP-1 like RNA-binding protein [Comamonas testosteroni KF-1]
gi|264678761|ref|YP_003278668.1| RNA-binding region RNP-1 [Comamonas testosteroni CNB-2]
gi|220710756|gb|EED66124.1| RNP-1 like RNA-binding protein [Comamonas testosteroni KF-1]
gi|262209274|gb|ACY33372.1| RNA-binding region RNP-1 [Comamonas testosteroni CNB-2]
Length = 113
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 49/82 (59%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S +++V L TD L+ FA FG + +KV+ DR TGRSKGF FV TS +E + A
Sbjct: 2 STKIYVGNLPYSVTDSSLRSNFAEFGTVTSAKVMMDRETGRSKGFAFVEMTSADECQAAI 61
Query: 93 EGMNAKYLDGWVIFVDPAKSRE 114
G++ +DG I V+ AK RE
Sbjct: 62 SGLHGMSVDGRSIVVNLAKPRE 83
>gi|406883357|gb|EKD30966.1| hypothetical protein ACD_77C00438G0003 [uncultured bacterium]
Length = 117
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 52/79 (65%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+S LS D L+E FA +G++ +KVITDR TG+S+GFGFV + EA++A E +
Sbjct: 3 IFISNLSWAVRDADLRELFAEYGEISSAKVITDRETGKSRGFGFVEMPTEAEAKKAIEEL 62
Query: 96 NAKYLDGWVIFVDPAKSRE 114
+ DG VI V+ AK RE
Sbjct: 63 DQAEYDGKVISVNVAKPRE 81
>gi|57335957|emb|CAH25380.1| putative glycine-rich RNA-binding protein [Guillardia theta]
Length = 152
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 48/83 (57%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+ FVSGL T E L++ FA FG + + V+ DR TGRS+GFGFV++ + E A
Sbjct: 62 KCFVSGLPWALTSEDLRDLFAEFGAIQDANVVYDRETGRSRGFGFVTFAESADCEAAITA 121
Query: 95 MNAKYLDGWVIFVDPAKSREARP 117
M+ + G + V A REARP
Sbjct: 122 MDKANIGGRTVLVKQANVREARP 144
>gi|428176294|gb|EKX45179.1| hypothetical protein GUITHDRAFT_152759 [Guillardia theta CCMP2712]
Length = 150
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 48/83 (57%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+ FVSGL T E L++ FA FG + + V+ DR TGRS+GFGFV++ + E A
Sbjct: 60 KCFVSGLPWALTSEDLRDLFAEFGAIQDANVVYDRETGRSRGFGFVTFAESADCEAAITA 119
Query: 95 MNAKYLDGWVIFVDPAKSREARP 117
M+ + G + V A REARP
Sbjct: 120 MDKANIGGRTVLVKQANVREARP 142
>gi|321260943|ref|XP_003195191.1| glycine-rich RNA binding protein [Cryptococcus gattii WM276]
gi|317461664|gb|ADV23404.1| Glycine-rich RNA binding protein, putative [Cryptococcus gattii
WM276]
Length = 177
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 54/83 (65%)
Query: 31 LTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAER 90
+++ +++V LS +TD+ L + F+ +G + V+ DR TGRS+GFGFV+Y S +EAE
Sbjct: 1 MSASKVYVGNLSWNSTDDTLLQVFSAYGTVTDCIVMKDRETGRSRGFGFVTYGSPQEAEA 60
Query: 91 AREGMNAKYLDGWVIFVDPAKSR 113
A MN + LDG + V+ A SR
Sbjct: 61 AIAAMNEQELDGRRVRVNMANSR 83
>gi|427387936|ref|ZP_18883921.1| hypothetical protein HMPREF9447_04954 [Bacteroides oleiciplenus YIT
12058]
gi|425725335|gb|EKU88208.1| hypothetical protein HMPREF9447_04954 [Bacteroides oleiciplenus YIT
12058]
Length = 94
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 50/82 (60%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++SGLS T D L E F+ +G+ +KVI DR TGRS+GFGFV T+ E ++A + +
Sbjct: 3 IYISGLSFGTNDADLNELFSAYGETSSAKVIMDRETGRSRGFGFVEMTNDAEGQKAIDEL 62
Query: 96 NAKYLDGWVIFVDPAKSREARP 117
N D I V A+ RE RP
Sbjct: 63 NGAEYDQKTISVTVARPREERP 84
>gi|332664392|ref|YP_004447180.1| RNP-1 like RNA-binding protein [Haliscomenobacter hydrossis DSM
1100]
gi|332333206|gb|AEE50307.1| RNP-1 like RNA-binding protein [Haliscomenobacter hydrossis DSM
1100]
Length = 130
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 51/79 (64%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+FV+ LS T D+ L+EAF +G + +K+I D++TGRSKGFGFV + +EA A EG+
Sbjct: 3 IFVAKLSFDTQDDDLREAFEQYGIVDSAKIIVDQSTGRSKGFGFVEMPNDDEALNAIEGL 62
Query: 96 NAKYLDGWVIFVDPAKSRE 114
+ LDG I A+ RE
Sbjct: 63 DNSDLDGRTIVAKKAEDRE 81
>gi|148699638|gb|EDL31585.1| cold inducible RNA binding protein, isoform CRA_a [Mus musculus]
gi|149034578|gb|EDL89315.1| cold inducible RNA binding protein, isoform CRA_b [Rattus
norvegicus]
gi|149034579|gb|EDL89316.1| cold inducible RNA binding protein, isoform CRA_b [Rattus
norvegicus]
Length = 168
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 95 MNAKYLDGWVIFVDPA-KSREARP 117
MN K +DG I VD A KS + R
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRS 90
>gi|58269652|ref|XP_571982.1| glycine-rich RNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|57228218|gb|AAW44675.1| glycine-rich RNA binding protein, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 182
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 54/83 (65%)
Query: 31 LTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAER 90
+++ +++V LS +TD+ L + F+ +G + V+ DR TGRS+GFGFV+Y S +EAE
Sbjct: 1 MSASKVYVGNLSWNSTDDTLLQVFSAYGTVTDCIVMKDRETGRSRGFGFVTYGSPQEAEA 60
Query: 91 AREGMNAKYLDGWVIFVDPAKSR 113
A MN + LDG + V+ A SR
Sbjct: 61 AIAAMNEQELDGRRVRVNMANSR 83
>gi|58269650|ref|XP_571981.1| glycine-rich RNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|134113905|ref|XP_774200.1| hypothetical protein CNBG1820 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256835|gb|EAL19553.1| hypothetical protein CNBG1820 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228217|gb|AAW44674.1| glycine-rich RNA binding protein, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 161
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 54/83 (65%)
Query: 31 LTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAER 90
+++ +++V LS +TD+ L + F+ +G + V+ DR TGRS+GFGFV+Y S +EAE
Sbjct: 1 MSASKVYVGNLSWNSTDDTLLQVFSAYGTVTDCIVMKDRETGRSRGFGFVTYGSPQEAEA 60
Query: 91 AREGMNAKYLDGWVIFVDPAKSR 113
A MN + LDG + V+ A SR
Sbjct: 61 AIAAMNEQELDGRRVRVNMANSR 83
>gi|68468953|ref|XP_721535.1| hypothetical protein CaO19.3037 [Candida albicans SC5314]
gi|68469502|ref|XP_721264.1| hypothetical protein CaO19.10555 [Candida albicans SC5314]
gi|74680286|sp|Q5AI15.1|PABP_CANAL RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|46443173|gb|EAL02457.1| hypothetical protein CaO19.10555 [Candida albicans SC5314]
gi|46443455|gb|EAL02737.1| hypothetical protein CaO19.3037 [Candida albicans SC5314]
gi|238879187|gb|EEQ42825.1| polyadenylate-binding protein [Candida albicans WO-1]
Length = 629
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 18 LKSQLGSIRYN--STLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSK 75
LK Q ++R + LFV L EKL+E F PFG + +KV+ D A G+SK
Sbjct: 318 LKKQYEAVRLEKLAKYQGVNLFVKNLDDTIDSEKLEEEFKPFGTITSAKVMVDEA-GKSK 376
Query: 76 GFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREAR 116
GFGFV +T+ EEA +A MN + ++G ++V A+ ++ R
Sbjct: 377 GFGFVCFTTPEEATKAITEMNTRMINGKPLYVALAQRKDVR 417
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++V + ++E ++ F+PFG++ + D+ G+SKGFGFV++ E A +A E +
Sbjct: 235 IYVKNIDLNYSEESFEKLFSPFGKITSIYLEKDQ-DGKSKGFGFVNFEDHESAVKAVEEL 293
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K ++G I+V A+ + R
Sbjct: 294 NDKEINGQKIYVGRAQKKRER 314
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L ++ L + F+ FG+++ KV TD G+SK FGFV Y + E AE A E +
Sbjct: 142 IFIKNLHPAIDNKALHDTFSAFGKILSCKVATDE-FGQSKCFGFVHYETAEAAEAAIENV 200
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N L+ +FV S++ R
Sbjct: 201 NGMLLNDREVFVGKHISKKDR 221
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 32 TSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERA 91
S L+V L+ + L E F+P GQ+ +V D + +S G+ +V+Y E+ E+A
Sbjct: 50 NSASLYVGELNPSVNEATLFEIFSPIGQVSSIRVCRDAVSKKSLGYAYVNYHKYEDGEKA 109
Query: 92 REGMNAKYLDG 102
E +N ++G
Sbjct: 110 IEELNYNPIEG 120
>gi|395831301|ref|XP_003788741.1| PREDICTED: cold-inducible RNA-binding protein [Otolemur garnettii]
Length = 172
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LF+ GLS T ++ L++ F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 7 KLFIGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 95 MNAKYLDGWVIFVDPA-KSREARP 117
MN K +DG I VD A KS + R
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRS 90
>gi|388858327|emb|CCF48115.1| related to glycine-rich RNA-binding protein [Ustilago hordei]
Length = 193
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 53/83 (63%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
+ +++V LS TTD+ L AF+ +GQL V+ DR TGRS+GFGFV++ + EA+ A
Sbjct: 2 AAKVYVGNLSWNTTDDSLAHAFSAYGQLTDYIVMKDRETGRSRGFGFVTFATQGEADAAI 61
Query: 93 EGMNAKYLDGWVIFVDPAKSREA 115
+N + LDG I V+ A SR A
Sbjct: 62 AALNEQELDGRRIRVNMANSRPA 84
>gi|115384864|ref|XP_001208979.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114196671|gb|EAU38371.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 157
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 49/76 (64%)
Query: 39 SGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAK 98
SGL+ TTDE L+ F FG + + V+ DR TGRS+GFGFV++TS +EA+ A +N +
Sbjct: 34 SGLAWHTTDESLRAGFEKFGTVDNAIVVKDRDTGRSRGFGFVTFTSPQEADAALNELNNQ 93
Query: 99 YLDGWVIFVDPAKSRE 114
DG +I VD A R
Sbjct: 94 EFDGRIIRVDFASERN 109
>gi|297826049|ref|XP_002880907.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326746|gb|EFH57166.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 116
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 55/90 (61%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV G+S +T+E L +AF+ +GQ++ VI D+ R KG +V+++S EEA +A
Sbjct: 20 SSTLFVKGISFSSTEETLTQAFSQYGQVLRVDVIMDKIRCRPKGIAYVTFSSKEEAGKAL 79
Query: 93 EGMNAKYLDGWVIFVDPAKSREARPPPPPP 122
+N + +DG V+ +D K+ + PP P
Sbjct: 80 LELNGRLVDGRVVILDITKAGKHNPPDTKP 109
>gi|449273022|gb|EMC82651.1| Cold-inducible RNA-binding protein [Columba livia]
Length = 153
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 51/76 (67%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 95 MNAKYLDGWVIFVDPA 110
MN K +DG I VD A
Sbjct: 67 MNGKSVDGRQIRVDQA 82
>gi|189500331|ref|YP_001959801.1| RNP-1 like RNA-binding protein [Chlorobium phaeobacteroides BS1]
gi|189495772|gb|ACE04320.1| RNP-1 like RNA-binding protein [Chlorobium phaeobacteroides BS1]
Length = 89
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 53/85 (62%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ L ++E L+EAF FG++ + +I+D+ TGRSKGFGFV + EA +A + +
Sbjct: 3 IYIGNLDYGVSEEDLREAFGEFGEVSSANIISDKFTGRSKGFGFVEMPNDAEANQAIDAL 62
Query: 96 NAKYLDGWVIFVDPAKSREARPPPP 120
N L+G I V+ A+ RE RP P
Sbjct: 63 NDTDLNGRSIKVNQARPREERPSRP 87
>gi|365153971|ref|ZP_09350405.1| hypothetical protein HMPREF1019_01088 [Campylobacter sp. 10_1_50]
gi|158605004|gb|EAT99377.3| 31 kDa ribonucleoprotein, (RNA-binding proteinRNP-T) (RNA-binding
protein 1/2/3) (AtRBP33) (RNA-binding proteincp31)
[Campylobacter concisus 13826]
gi|363650683|gb|EHL89770.1| hypothetical protein HMPREF1019_01088 [Campylobacter sp. 10_1_50]
Length = 81
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 51/79 (64%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++V LS TT+ +LKEAFA FG++ +K++ DR T RSKGFGFV E ++A + +
Sbjct: 3 IYVGNLSYRTTEAELKEAFAQFGEVRRAKIVKDRETDRSKGFGFVEMDDANEGQKAIDAL 62
Query: 96 NAKYLDGWVIFVDPAKSRE 114
N K L G + V+ A+ R+
Sbjct: 63 NEKELGGRTLRVNEARPRD 81
>gi|298244419|ref|ZP_06968225.1| RNP-1 like RNA-binding protein [Ktedonobacter racemifer DSM 44963]
gi|297551900|gb|EFH85765.1| RNP-1 like RNA-binding protein [Ktedonobacter racemifer DSM 44963]
Length = 106
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 54/98 (55%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R++V GL +T++ L + F GQ+ ++ VITDR TGRSKGFGFV +S +EA A E
Sbjct: 2 RIYVGGLPYQSTEQDLIQLFEQIGQVTFATVITDRETGRSKGFGFVEMSSDDEARAAIEQ 61
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMG 132
+N L I V+ A+ R A Y + S G
Sbjct: 62 LNGSTLGDRTITVNEARERRAPGGGGGGYQSRDRSSNG 99
>gi|242076850|ref|XP_002448361.1| hypothetical protein SORBIDRAFT_06g025810 [Sorghum bicolor]
gi|241939544|gb|EES12689.1| hypothetical protein SORBIDRAFT_06g025810 [Sorghum bicolor]
Length = 727
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 60/111 (54%), Gaps = 6/111 (5%)
Query: 12 SSGSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRAT 71
S+G + + L I+ + T+ L++ L D L F+ FG +V +KVI DR T
Sbjct: 409 STGGGVAATGLNGIKKDYDETN--LYIGYLPPTMDDPGLISLFSQFGDIVMAKVIKDRNT 466
Query: 72 GRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREARPPPPPP 122
G+SKG+GFV Y+ + +A A MN +L+G VI V A +PP P P
Sbjct: 467 GQSKGYGFVKYSDVSQANAAIAAMNGHHLEGRVIAVRVA----GKPPQPAP 513
>gi|255584774|ref|XP_002533105.1| cold-inducible RNA binding protein, putative [Ricinus communis]
gi|223527096|gb|EEF29277.1| cold-inducible RNA binding protein, putative [Ricinus communis]
Length = 94
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 56/78 (71%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV LS TT++KL++ F+PFG + ++++ D T + KGFGFV++ S +A++A +
Sbjct: 8 QLFVGRLSCYTTNQKLEKLFSPFGIVKEARLVLDPRTQKPKGFGFVTFDSESQAQKALKA 67
Query: 95 MNAKYLDGWVIFVDPAKS 112
MN + +DG ++FV+ AKS
Sbjct: 68 MNGRIVDGRLLFVEVAKS 85
>gi|345313668|ref|XP_001512332.2| PREDICTED: cold-inducible RNA-binding protein-like [Ornithorhynchus
anatinus]
Length = 270
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 95 MNAKYLDGWVIFVDPA-KSRE 114
MN K +DG I VD A KS E
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSE 87
>gi|344243389|gb|EGV99492.1| Cold-inducible RNA-binding protein [Cricetulus griseus]
Length = 184
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 95 MNAKYLDGWVIFVDPA-KSREARP 117
MN K +DG I VD A KS + R
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRS 90
>gi|255930353|ref|XP_002556736.1| Pc06g01290 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211581349|emb|CAP79122.1| Pc06g01290 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 140
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 49/82 (59%)
Query: 34 PRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERARE 93
+LF+ GLS T D L++ F FG + + V+ DR TGRS+GFGFV +++ +EA A
Sbjct: 2 SKLFIGGLSWNTDDNSLRQRFEEFGVVEDATVVKDRDTGRSRGFGFVRFSTDDEATAAMN 61
Query: 94 GMNAKYLDGWVIFVDPAKSREA 115
MN + DG I VD A R A
Sbjct: 62 AMNNQEFDGRQIRVDKATERAA 83
>gi|298246745|ref|ZP_06970550.1| RNP-1 like RNA-binding protein [Ktedonobacter racemifer DSM 44963]
gi|297549404|gb|EFH83270.1| RNP-1 like RNA-binding protein [Ktedonobacter racemifer DSM 44963]
Length = 109
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 50/81 (61%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R++V GL +T++ L + F GQ+ ++ VITDR TGRSKGFGFV +S +EA A E
Sbjct: 2 RIYVGGLPYQSTEQDLIQLFEQIGQVTFATVITDRETGRSKGFGFVEMSSDDEARVAIEQ 61
Query: 95 MNAKYLDGWVIFVDPAKSREA 115
+N L I V+ A+ R A
Sbjct: 62 LNGSTLGNRTITVNEARERRA 82
>gi|388518113|gb|AFK47118.1| unknown [Lotus japonicus]
Length = 146
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 57/93 (61%)
Query: 25 IRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTS 84
+ Y ++S +LF+ GLS D+ L++AF+ FG + ++VI DR TGRS+GFGFVS+ S
Sbjct: 27 LNYIRCMSSSKLFIGGLSYGVDDKSLEDAFSSFGTVAEARVIVDRDTGRSRGFGFVSFDS 86
Query: 85 IEEAERAREGMNAKYLDGWVIFVDPAKSREARP 117
E A A M+ + L+G I V A R A P
Sbjct: 87 EESASSALSSMDGQDLNGRNIRVSYANDRPAGP 119
>gi|168036414|ref|XP_001770702.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678063|gb|EDQ64526.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 165
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 49/77 (63%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GLS TTD+ L+E F FG ++ +KVI D+ TG S+GFGFV++ E A E
Sbjct: 8 RCFVGGLSWNTTDKGLEEEFRHFGNVLEAKVIVDKETGHSRGFGFVNFGDERSMEEAIER 67
Query: 95 MNAKYLDGWVIFVDPAK 111
++ K LDG I V+ AK
Sbjct: 68 LHGKELDGRPITVNRAK 84
>gi|375146472|ref|YP_005008913.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
gi|361060518|gb|AEV99509.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
Length = 95
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 52/82 (63%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++VS LS DE LK+ FAP+G++ +KVITDR TGRS+GFGFV T +++A +
Sbjct: 3 IYVSNLSFDVHDEDLKDFFAPYGEVTSAKVITDRETGRSRGFGFVEMTDEAASKKAIAEL 62
Query: 96 NAKYLDGWVIFVDPAKSREARP 117
+ ++ I V AK +E RP
Sbjct: 63 DGSTVENRTISVSVAKPKEDRP 84
>gi|326505708|dbj|BAJ95525.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 226
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 50/77 (64%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV LS TTDE LK+AF+ +G++ +KV+ D+ +GRS+GF FV++ + E A E
Sbjct: 8 RCFVGNLSWSTTDESLKDAFSKYGKVTEAKVVMDKFSGRSRGFAFVTFDEKKAMEEAIED 67
Query: 95 MNAKYLDGWVIFVDPAK 111
MN L+G I VD A+
Sbjct: 68 MNGLDLEGRAITVDKAQ 84
>gi|388521423|gb|AFK48773.1| unknown [Lotus japonicus]
Length = 146
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 57/93 (61%)
Query: 25 IRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTS 84
+ Y ++S +LF+ GLS D+ L++AF+ FG + ++VI DR TGRS+GFGFVS+ S
Sbjct: 27 LNYIRCMSSSKLFIGGLSYGVDDKSLEDAFSSFGTVAEARVIVDRDTGRSRGFGFVSFDS 86
Query: 85 IEEAERAREGMNAKYLDGWVIFVDPAKSREARP 117
E A A M+ + L+G I V A R A P
Sbjct: 87 EESASSALSSMDGQDLNGRNIRVSYANDRPAGP 119
>gi|385808713|ref|YP_005845109.1| RRM domain RNA-binding protein [Ignavibacterium album JCM 16511]
gi|383800761|gb|AFH47841.1| RRM domain RNA-binding protein [Ignavibacterium album JCM 16511]
Length = 83
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 48/81 (59%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S +LFV L DE L+E F G +V +KVI DR TGRS+GFGFV + +A+ A
Sbjct: 2 STKLFVGSLPWSVDDETLRETFEEHGNVVSAKVIKDRETGRSRGFGFVEMENSADAKSAI 61
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
E +N L G I V+ AKSR
Sbjct: 62 EALNDSELKGRNIVVNEAKSR 82
>gi|326491331|dbj|BAK05765.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 262
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 50/77 (64%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV LS TTDE LK+AF+ +G++ +KV+ D+ +GRS+GF FV++ + E A E
Sbjct: 44 RCFVGNLSWSTTDESLKDAFSKYGKVTEAKVVMDKFSGRSRGFAFVTFDEKKAMEEAIED 103
Query: 95 MNAKYLDGWVIFVDPAK 111
MN L+G I VD A+
Sbjct: 104 MNGLDLEGRAITVDKAQ 120
>gi|449439247|ref|XP_004137398.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like-B-like
[Cucumis sativus]
Length = 170
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 45/66 (68%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S RL++SGLS TT+E L+ AF FGQLV ++ DR R +GF F+ Y S EE+++A
Sbjct: 88 STRLYISGLSFRTTEESLRNAFKSFGQLVEVNLVMDRLANRPRGFAFLRYASEEESQKAI 147
Query: 93 EGMNAK 98
EGM+ K
Sbjct: 148 EGMHGK 153
>gi|77735511|ref|NP_001029450.1| cold-inducible RNA-binding protein [Bos taurus]
gi|74353851|gb|AAI02774.1| Cold inducible RNA binding protein [Bos taurus]
gi|296485364|tpg|DAA27479.1| TPA: cold inducible RNA binding protein [Bos taurus]
Length = 213
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+GFGFV++ +I++A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 95 MNAKYLDGWVIFVDPA-KSREAR 116
MN K +DG I VD A KS + R
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNR 89
>gi|390460450|ref|XP_002745401.2| PREDICTED: polyadenylate-binding protein 4-like [Callithrix
jacchus]
Length = 384
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Query: 47 DEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIF 106
DE+LK+ F+ +G+ + KV+TD ++G+SKGFGFVS+ S E A++A E MN + ++G +IF
Sbjct: 203 DERLKDVFSKYGKTLSVKVMTD-SSGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIF 261
Query: 107 VDPAKSREARPPPPPPYPEQQPSE 130
V A+ + R EQ E
Sbjct: 262 VARAQKKVERQAELKQMFEQLKKE 285
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L E F+ FG+++ SKV++D SKG+ FV + + A+RA E M
Sbjct: 100 VFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQG--SKGYAFVHFQNQSAADRAIEEM 157
Query: 96 NAKYLDGWVIFVDPAKSREARPPP 119
N K L G +FV KSR+ R
Sbjct: 158 NGKLLQGCKVFVGRFKSRKDREAE 181
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V L DEKL+ F+ FG + KV+ + G+SKGFG + ++S E+A +A
Sbjct: 294 KLYVKNLDDTIDDEKLRNEFSSFGSISRVKVMQEE--GQSKGFGLICFSSPEDALKAMTE 351
Query: 95 MNAKYL 100
MN + L
Sbjct: 352 MNGRIL 357
>gi|328767903|gb|EGF77951.1| hypothetical protein BATDEDRAFT_27077 [Batrachochytrium
dendrobatidis JAM81]
Length = 106
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 53/81 (65%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
++FV LS T + L +AF+ FG++V S V+ DR TGRS+GFGFV+++S E A A +
Sbjct: 12 KVFVGNLSWGTDNNSLADAFSQFGEVVDSIVLKDRETGRSRGFGFVTFSSPESASAAVDA 71
Query: 95 MNAKYLDGWVIFVDPAKSREA 115
MN + L+G I V+ A R A
Sbjct: 72 MNGQDLNGRNIRVNLANERPA 92
>gi|355687608|gb|EHH26192.1| hypothetical protein EGK_16094 [Macaca mulatta]
gi|355749570|gb|EHH53969.1| hypothetical protein EGM_14691 [Macaca fascicularis]
Length = 370
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Query: 47 DEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIF 106
DE+LK+ F+ +G+ + KV+TD ++G+SKGFGFVS+ S E A++A E MN + ++G +IF
Sbjct: 203 DERLKDVFSKYGKTLSVKVMTD-SSGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIF 261
Query: 107 VDPAKSREARPPPPPPYPEQQPSE 130
V A+ + R EQ E
Sbjct: 262 VGRAQKKVERQAELKQMFEQLKRE 285
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V L DEKL+ F+ FG ++ KV+ + G+SKGFGF+ ++S+E+A +A
Sbjct: 294 KLYVKNLDDTIDDEKLRNEFSSFGSIIRVKVM--QQEGQSKGFGFICFSSLEDATKAMIE 351
Query: 95 MNAKYL 100
MN +L
Sbjct: 352 MNGCFL 357
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L E F+ FG+++ SKV++D SKG+ FV + + A+RA E M
Sbjct: 100 VFIKNLDKSIDNKTLYEHFSGFGKILSSKVMSDDQG--SKGYAFVHFQNQSAADRAIEEM 157
Query: 96 NAKYLDGWVIFVDPAKSREARPPP 119
N K L +FV K+R+ R
Sbjct: 158 NGKLLKSCKVFVGRFKNRKDREAE 181
>gi|119625554|gb|EAX05149.1| hCG1647909 [Homo sapiens]
Length = 369
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Query: 47 DEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIF 106
DE+LK+ F+ +G+ + KV+TD ++G+SKGFGFVS+ S E A++A E MN + ++G +IF
Sbjct: 203 DERLKDVFSKYGKTLSVKVMTD-SSGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIF 261
Query: 107 VDPAKSREARPPPPPPYPEQQPSE 130
V A+ + R EQ E
Sbjct: 262 VGRAQKKVERQAELKQMFEQLKRE 285
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L E F+ FG+++ SKV++D SKG+ FV + + A+RA E M
Sbjct: 100 VFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQG--SKGYAFVHFQNQSAADRAIEEM 157
Query: 96 NAKYLDGWVIFVDPAKSREARPPP 119
N K L G +FV K+R+ R
Sbjct: 158 NGKLLKGCKVFVGRFKNRKDREAE 181
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L++ L DEKL+ F+ FG + KV+ + G+SKGFG + ++S E+A +A
Sbjct: 294 KLYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQEE--GQSKGFGLICFSSPEDATKAMTE 351
Query: 95 MNAKYL 100
MN + L
Sbjct: 352 MNGRIL 357
>gi|259515737|sp|P0CB38.1|PAB4L_HUMAN RecName: Full=Polyadenylate-binding protein 4-like;
Short=PABP-4-like; Short=Poly(A)-binding protein 4-like
Length = 370
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Query: 47 DEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIF 106
DE+LK+ F+ +G+ + KV+TD ++G+SKGFGFVS+ S E A++A E MN + ++G +IF
Sbjct: 203 DERLKDVFSKYGKTLSVKVMTD-SSGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIF 261
Query: 107 VDPAKSREARPPPPPPYPEQQPSE 130
V A+ + R EQ E
Sbjct: 262 VGRAQKKVERQAELKQMFEQLKRE 285
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L E F+ FG+++ SKV++D SKG+ FV + + A+RA E M
Sbjct: 100 VFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQG--SKGYAFVHFQNQSAADRAIEEM 157
Query: 96 NAKYLDGWVIFVDPAKSREARPPP 119
N K L G +FV K+R+ R
Sbjct: 158 NGKLLKGCKVFVGRFKNRKDREAE 181
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L++ L DEKL+ F+ FG + KV+ + G+SKGFG + ++S E+A +A
Sbjct: 294 KLYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQEE--GQSKGFGLICFSSPEDATKAMTE 351
Query: 95 MNAKYL 100
MN + L
Sbjct: 352 MNGRIL 357
>gi|1015370|gb|AAA79045.1| 24 kDa RNA binding protein, partial [Spinacia oleracea]
Length = 220
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 52/87 (59%)
Query: 32 TSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERA 91
+S R+ V LS D+ LK F+ G +V +KVI DR TGRS+GFGFV+Y S E A
Sbjct: 133 SSNRVHVGNLSWKVDDDALKTLFSETGDVVEAKVIYDRDTGRSRGFGFVTYNSANEVNTA 192
Query: 92 REGMNAKYLDGWVIFVDPAKSREARPP 118
E ++ L+G I V A++R+ R P
Sbjct: 193 IESLDGVDLNGRSIRVTAAEARQRRGP 219
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
++FV L +L F G + +VI D+ TGRS+GFGFV+ +S+EE E A +
Sbjct: 39 KIFVGNLPFNVDSAELAGLFGAAGTVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEAAAQQ 98
Query: 95 MNAKYLDGWVIFVDPAKSREARPP 118
N LDG + V ++ P
Sbjct: 99 FNNYELDGRTLRVTEDSHKDMTLP 122
>gi|255944269|ref|XP_002562902.1| Pc20g03510 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587637|emb|CAP85680.1| Pc20g03510 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 151
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 49/78 (62%)
Query: 39 SGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAK 98
SGLS T+D+ L+E F FG++ + V+ DRAT RS+GFGFV + + EA+ A MN +
Sbjct: 4 SGLSWHTSDDTLREGFQQFGEIQEAIVVKDRATQRSRGFGFVRFATDAEADAALGAMNNQ 63
Query: 99 YLDGWVIFVDPAKSREAR 116
DG VI VD A R R
Sbjct: 64 EFDGRVIRVDKAFDRPQR 81
>gi|358334962|dbj|GAA31742.2| polyadenylate-binding protein, partial [Clonorchis sinensis]
Length = 738
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V L DE+LKEAF+ +G + +KV+TD A GRSKGFGFV +T E+A RA M
Sbjct: 286 LYVKNLDDNIDDERLKEAFSHYGPITSAKVMTD-ANGRSKGFGFVCFTQPEQAARAVTEM 344
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
NA + ++V A+ +E R
Sbjct: 345 NATLVGSKPLYVALAQRKEDR 365
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 57/102 (55%), Gaps = 7/102 (6%)
Query: 15 SSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRS 74
SS KS G +R+N+ ++V TTDEKL++ F+ FG+ + S + G+S
Sbjct: 167 SSDRKSASGKLRFNN------IYVKNFPPDTTDEKLRDMFSEFGE-IKSCCVEKNPEGKS 219
Query: 75 KGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREAR 116
KGFGFV + + AE+A M+ K ++G ++ A+ +E R
Sbjct: 220 KGFGFVCFHDPDHAEQAVRVMHGKEINGRALYASRAQRKEER 261
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++L + F+ G+++ K+ D G SKG+GFV + E AERA E +
Sbjct: 91 IFIKNLDKTIDQKQLYDTFSFIGKILSCKIAMDE-HGNSKGYGFVHFEKEECAERAIEKI 149
Query: 96 NAKYLDGWVIFV 107
N ++ V++V
Sbjct: 150 NGMMINDRVVYV 161
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V L L T+ L F+ G ++ +++ D AT S G+G+V++ ++AERA E +
Sbjct: 3 LYVGDLHPLATEALLYSKFSEIGTVLSARICRDLATRNSLGYGYVNFEEPKDAERALENL 62
Query: 96 NAKYLDGWVIFV 107
N + G I +
Sbjct: 63 NYESFMGRPIRI 74
>gi|260221864|emb|CBA30852.1| Putative RNA-binding protein rbpB [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 124
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 59/98 (60%), Gaps = 5/98 (5%)
Query: 24 SIRYNSTLT-----SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFG 78
+ R +S LT S +++V L TD+ L+ F+ FG++ +KV+ DR TGRSKGF
Sbjct: 14 ATRADSALTERLTMSSKIYVGNLPYSVTDDSLQSNFSEFGEVTSAKVMMDRDTGRSKGFA 73
Query: 79 FVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREAR 116
FV ++ A+ A +G+N + +DG I V+ A+ RE R
Sbjct: 74 FVEMSTPAFAQAAIDGLNGQSVDGRSIVVNLARPREDR 111
>gi|374384996|ref|ZP_09642507.1| hypothetical protein HMPREF9449_00893 [Odoribacter laneus YIT
12061]
gi|373227054|gb|EHP49375.1| hypothetical protein HMPREF9449_00893 [Odoribacter laneus YIT
12061]
Length = 100
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 50/82 (60%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++VS LS D L++ F +G++ +KVI DR +GRS+GFGFV S E ++A + +
Sbjct: 3 IYVSNLSYAVNDSDLRDLFGEYGEISSAKVIMDRESGRSRGFGFVEMPSDTEGQKAIDEL 62
Query: 96 NAKYLDGWVIFVDPAKSREARP 117
N DG VI V+ AK R RP
Sbjct: 63 NQVEYDGKVINVNVAKPRTDRP 84
>gi|340992759|gb|EGS23314.1| hypothetical protein CTHT_0009820 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 191
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 48/76 (63%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LF+ GL+ T D LK+ F FG + + V+ DR TGRS+GFGFV YT+ +A++A +
Sbjct: 3 KLFIGGLAWHTEDATLKKKFEEFGVVEEAVVVKDRDTGRSRGFGFVRYTNEADAQKAMDA 62
Query: 95 MNAKYLDGWVIFVDPA 110
MN DG I VD A
Sbjct: 63 MNNVEFDGRQIRVDKA 78
>gi|432097499|gb|ELK27684.1| Polyadenylate-binding protein 4-like protein [Myotis davidii]
Length = 370
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DEKLKE F+ +G++V KV+TD ++G+SKGFGFVS+ + E A+RA + +
Sbjct: 192 IYIKNFGDEMDDEKLKEFFSHYGKIVSVKVMTD-SSGKSKGFGFVSFDTHEAAKRAVDIV 250
Query: 96 NAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGFRTNKT 138
N + + G +FV A+ + R EQ+ E +R T
Sbjct: 251 NGREIFGQQVFVGRAQKKAERQAELKQLFEQRKQERSWRVRGT 293
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L E F+ FG+++ SKV+ D S+G+GFV + + A+RA E M
Sbjct: 100 VFIKNLDKSIDNKTLYEHFSVFGKILSSKVMCDDQG--SRGYGFVHFQNQAAADRAIEEM 157
Query: 96 NAKYLDGWVIFVDPAKSREARPPP 119
N L + +FV P K+R R
Sbjct: 158 NGVLLKDFRLFVGPFKNRRDREAE 181
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+++V L +EKL++AF+ FG ++ KV+ + GRS+GFG + ++S EEA RA
Sbjct: 294 KIYVKNLDETIDEEKLRKAFSSFGSIIRVKVMQEE--GRSRGFGLICFSSPEEAARAMAE 351
Query: 95 MNAKYL 100
MN + L
Sbjct: 352 MNGRLL 357
>gi|19114289|ref|NP_593377.1| mRNA export shuttling protein [Schizosaccharomyces pombe 972h-]
gi|3123239|sp|P31209.2|PABP_SCHPO RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|2104439|emb|CAB08762.1| mRNA export shuttling protein [Schizosaccharomyces pombe]
Length = 653
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
LF+ L DE+LK F+ FG + +K++TD G+SKGFGFV YT+ EEA +A
Sbjct: 365 NLFIKNLQDEVDDERLKAEFSAFGTITSAKIMTDE-QGKSKGFGFVCYTTPEEANKAVTE 423
Query: 95 MNAKYLDGWVIFVDPAKSREAR 116
MN + L G ++V A+ +E R
Sbjct: 424 MNQRMLAGKPLYVALAQRKEVR 445
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+F+ L ++ L + F+ FG+++ KV D G +KG+GFV + S+E A A E
Sbjct: 169 NVFIKNLDPAIDNKALHDTFSAFGKILSCKVAVDE-LGNAKGYGFVHFDSVESANAAIEH 227
Query: 95 MNAKYLDGWVIFVDPAKSREAR 116
+N L+ ++V SR R
Sbjct: 228 VNGMLLNDKKVYVGHHVSRRER 249
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 19 KSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFG 78
+S++ +++ N T +++ L T+++ + F FG++ ++ D+ + +GFG
Sbjct: 250 QSKVEALKANFT----NVYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQ-NDKPRGFG 304
Query: 79 FVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREAR 116
FV+Y + E A++A + +N K G ++V A+ + R
Sbjct: 305 FVNYANHECAQKAVDELNDKEYKGKKLYVGRAQKKHER 342
>gi|406965367|gb|EKD91001.1| Glycine-rich RNA-binding protein [uncultured bacterium]
Length = 87
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S +LFV L D L+EAF+ +G+++ + V+ DR TGRS+GFGFV + + + ++A
Sbjct: 5 SKKLFVGSLPWGVDDSGLREAFSKYGEIIQATVLKDRQTGRSRGFGFVEFANDADGDKAI 64
Query: 93 EGMNAKYLDGWVIFVDPAKSRE 114
+ MN +DG I V+ A+ RE
Sbjct: 65 QEMNGADMDGRNIVVNEARPRE 86
>gi|159164540|pdb|2FC8|A Chain A, Solution Structure Of The Rrm_1 Domain Of Ncl Protein
Length = 102
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 51/79 (64%), Gaps = 3/79 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKE+F V ++++TDR TG SKGFGFV + S E+A+ A+
Sbjct: 15 SKTLFVKGLSEDTTEETLKESFDG---SVRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 71
Query: 93 EGMNAKYLDGWVIFVDPAK 111
E M +DG + +D AK
Sbjct: 72 EAMEDGEIDGNKVTLDWAK 90
>gi|302340505|ref|YP_003805711.1| RNP-1 like RNA-binding protein [Spirochaeta smaragdinae DSM 11293]
gi|301637690|gb|ADK83117.1| RNP-1 like RNA-binding protein [Spirochaeta smaragdinae DSM 11293]
Length = 88
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 52/85 (61%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
+ +++V L+ T +E L++ F +GQ+ +ITDR TG+SKGFGFV ++ AE A
Sbjct: 2 AKKIYVGNLNYSTREESLQDLFGQYGQVNSVNIITDRYTGQSKGFGFVEMEEMDAAEAAI 61
Query: 93 EGMNAKYLDGWVIFVDPAKSREARP 117
++ LDG + V+ AK RE RP
Sbjct: 62 SALDGTSLDGRELRVNEAKERERRP 86
>gi|168007043|ref|XP_001756218.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692728|gb|EDQ79084.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 158
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 60/100 (60%)
Query: 24 SIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYT 83
+R ++T L+V+GLS T++ L E F+ G++V +++ D T S+GFGFV+
Sbjct: 7 DVREDATNPGNNLYVTGLSTRVTEKDLDEHFSREGKVVECRLVVDPRTRESRGFGFVTMD 66
Query: 84 SIEEAERAREGMNAKYLDGWVIFVDPAKSREARPPPPPPY 123
+ ++A+R + +N L+G +I V+ AK + AR P P Y
Sbjct: 67 NADDADRCVKYLNRSTLEGRIITVEKAKRKRARTPTPGEY 106
>gi|406983427|gb|EKE04629.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 96
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 49/80 (61%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LF+ L+ T++E L E +G++ ++I DR TGRSKGFGFV + E+AE E
Sbjct: 2 KLFIGNLNFKTSEEDLMELLKEYGEVKSLQIIKDRDTGRSKGFGFVEMATKEQAESVMEN 61
Query: 95 MNAKYLDGWVIFVDPAKSRE 114
+N DG V+ VD AK +E
Sbjct: 62 LNGAEFDGKVLKVDYAKEKE 81
>gi|410098203|ref|ZP_11293182.1| hypothetical protein HMPREF1076_02360 [Parabacteroides goldsteinii
CL02T12C30]
gi|409222476|gb|EKN15418.1| hypothetical protein HMPREF1076_02360 [Parabacteroides goldsteinii
CL02T12C30]
Length = 126
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 49/79 (62%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L++S LS TD L E FA +G+++ ++VITDR TGRS+GFGFV A++A E +
Sbjct: 3 LYISNLSYNVTDADLNELFADYGEILSARVITDRETGRSRGFGFVELKDDNLAKKAIEEL 62
Query: 96 NAKYLDGWVIFVDPAKSRE 114
N D VI V A+ RE
Sbjct: 63 NQATYDEKVINVTEARPRE 81
>gi|173421|gb|AAA35320.1| poly(A)-binding protein, partial [Schizosaccharomyces pombe]
Length = 628
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
LF+ L DE+LK F+ FG + +K++TD G+SKGFGFV YT+ EEA +A M
Sbjct: 352 LFIKNLQDEVDDERLKAEFSAFGTITSAKIMTDE-QGKSKGFGFVCYTTPEEANKAVTEM 410
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N + L G ++V A+ +E R
Sbjct: 411 NQRMLAGKPLYVALAQRKEVR 431
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L ++ L + F+ FG+++ KV D G +KG+GFV + S+E A A E +
Sbjct: 156 VFIKNLDPAIDNKALHDTFSAFGKILSCKVAVDE-LGNAKGYGFVHFDSVESANAAIEHV 214
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N L+ ++V SR R
Sbjct: 215 NGMLLNDKKVYVGHHVSRRER 235
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 19 KSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFG 78
+S++ +++ N T +++ L T+++ + F FG++ ++ D+ + +GFG
Sbjct: 236 QSKVEALKANFT----NVYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQ-NDKPRGFG 290
Query: 79 FVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREAR 116
FV+Y + E A++A + +N K G ++V A+ + R
Sbjct: 291 FVNYANHECAQKAVDELNDKEYKGKKLYVGRAQKKHER 328
>gi|15982739|gb|AAL09710.1| AT3g26420/F20C19_14 [Arabidopsis thaliana]
gi|19699180|gb|AAL90956.1| AT3g26420/F20C19_14 [Arabidopsis thaliana]
Length = 148
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 49/77 (63%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R F+ GL+ T+D L++AF +G LV +KV+ D+ +GRS+GFGF+++ + + A
Sbjct: 8 RCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKAMDEAIAA 67
Query: 95 MNAKYLDGWVIFVDPAK 111
MN LDG I VD A+
Sbjct: 68 MNGMDLDGRTITVDKAQ 84
>gi|226222462|gb|ACO38649.1| nucleolin-like protein [Rattus norvegicus]
Length = 569
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 51/79 (64%), Gaps = 3/79 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKE+F V ++++TDR TG SKGFGFV + S E+A+ A+
Sbjct: 430 SKTLFVKGLSEDTTEETLKESFEGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKTAK 486
Query: 93 EGMNAKYLDGWVIFVDPAK 111
E M +DG + +D AK
Sbjct: 487 EAMEDGEIDGNKVTLDWAK 505
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S L +S LS T+E L+E F + + KV + G+SKG+ F+ + S E+A+ A
Sbjct: 344 SKTLVLSNLSYSATEETLQEVFE---KATFIKVPQN-PHGKSKGYAFIEFASFEDAKEAL 399
Query: 93 EGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
N ++G I + E + P P QPS+ F
Sbjct: 400 NSCNKMEIEGRTIRL------ELQGPRGSPNARSQPSKTLF 434
>gi|62857699|ref|NP_001017228.1| cold-inducible RNA-binding protein [Xenopus (Silurana) tropicalis]
gi|123910273|sp|Q28IQ9.1|CIRBP_XENTR RecName: Full=Cold-inducible RNA-binding protein; AltName:
Full=Glycine-rich RNA-binding protein CIRP
gi|89268649|emb|CAJ83306.1| cold inducible RNA binding protein [Xenopus (Silurana) tropicalis]
Length = 166
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 52/81 (64%)
Query: 30 TLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAE 89
+ +LFV GL+ TT+E L++ F+ +GQ+ V+ DR + RS+GFGFV++ + E+A+
Sbjct: 2 SCDEGKLFVGGLNFETTEESLEQVFSKYGQVAEVVVVKDRESKRSRGFGFVTFENPEDAK 61
Query: 90 RAREGMNAKYLDGWVIFVDPA 110
A MN K +DG I VD A
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQA 82
>gi|329960883|ref|ZP_08299162.1| hypothetical protein HMPREF9446_00723 [Bacteroides fluxus YIT
12057]
gi|328532169|gb|EGF58973.1| hypothetical protein HMPREF9446_00723 [Bacteroides fluxus YIT
12057]
Length = 101
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 53/82 (64%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++++GL+ TTD L + F+ +G++ ++VITDR TGRS+GFGFV + A++A + +
Sbjct: 3 IYIAGLNFSTTDADLNDLFSEYGEVSSARVITDRETGRSRGFGFVEMSDDTAAQKAIDEL 62
Query: 96 NAKYLDGWVIFVDPAKSREARP 117
N D I V+ A+ RE RP
Sbjct: 63 NGAEYDQKTISVNVARPREERP 84
>gi|354544113|emb|CCE40835.1| hypothetical protein CPAR2_108740 [Candida parapsilosis]
Length = 650
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 18 LKSQLGSIRYN--STLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSK 75
LK Q +IR S LF+ L EKL+E F PFG + +KV+ D A G+SK
Sbjct: 329 LKKQYEAIRLEKLSKYQGVNLFIKNLDDQIDSEKLEEEFKPFGTITSAKVMVDDA-GKSK 387
Query: 76 GFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREAR 116
GFGFV +++ EEA +A MN + ++G ++V A+ ++ R
Sbjct: 388 GFGFVCFSTPEEATKAITEMNQRMINGKPLYVALAQRKDVR 428
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L ++ L + F+ FG+++ KV TD G+SK FGFV Y + E AE A E +
Sbjct: 153 IFIKNLHPAIDNKALHDTFSAFGRILSCKVATDD-MGQSKCFGFVHYETGEAAEAAIENV 211
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N L+ +FV S++ R
Sbjct: 212 NGMLLNDREVFVGKHVSKKDR 232
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++V + T+++ +E FAP+G++ + D+ G+SKGFGFV+Y + A A E +
Sbjct: 246 IYVKNIDLGFTEKEFEELFAPYGKITSIYLEKDQ-DGKSKGFGFVNYEEHKSAVDAVEAL 304
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K ++G I+V A+ + R
Sbjct: 305 NDKEINGQKIYVGRAQKKRER 325
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 15 SSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRS 74
SS + +LG + NS L+V L+ + L E F+P GQ+ +V D T +S
Sbjct: 48 SSEEQGELGGVAENSA----SLYVGELNPSVNEATLFEIFSPIGQVSSIRVCRDAVTKKS 103
Query: 75 KGFGFVSYTSIEEAERAREGMNAKYLDG 102
G+ +V+Y E+ E+A + +N ++G
Sbjct: 104 LGYAYVNYHKFEDGEKAIDELNYSLVEG 131
>gi|31455187|gb|AAH06494.3| NCL protein [Homo sapiens]
gi|31455191|gb|AAH06516.3| NCL protein [Homo sapiens]
gi|31455242|gb|AAH02343.3| NCL protein [Homo sapiens]
Length = 482
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKE+F V ++++TDR TG SKGFGFV + S E+A+ A+
Sbjct: 343 SKTLFVKGLSEDTTEETLKESF---DGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 399
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
E M +DG + +D AK +
Sbjct: 400 EAMEDGEIDGNKVTLDWAKPK 420
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 28 NSTLT--SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSI 85
NST + S L +S LS T+E L+E F + + KV ++ G+SKG+ F+ + S
Sbjct: 250 NSTWSGESKTLVLSNLSYSATEETLQEVFE---KATFIKVPQNQ-NGKSKGYAFIEFASF 305
Query: 86 EEAERAREGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
E+A+ A N + ++G I + E + P P QPS+ F
Sbjct: 306 EDAKEALNSCNKREIEGRAIRL------ELQGPRGSPNARSQPSKTLF 347
>gi|209155104|gb|ACI33784.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|223648252|gb|ACN10884.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 167
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 50/76 (65%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ VI DR T RS+GFGFV++ + +EA+ A
Sbjct: 6 KLFVGGLSFDTNEQSLEDVFSKYGQISEVVVIKDRETQRSRGFGFVTFENPDEAKDAMLA 65
Query: 95 MNAKYLDGWVIFVDPA 110
MN K LDG I VD A
Sbjct: 66 MNGKSLDGRQIRVDQA 81
>gi|26327461|dbj|BAC27474.1| unnamed protein product [Mus musculus]
Length = 707
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKE+F V ++++TDR TG SKGFGFV + S E+A+ A+
Sbjct: 568 SKTLFVKGLSEDTTEETLKESFE---GSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 624
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
E M +DG + +D AK +
Sbjct: 625 EAMEDGEIDGNKVTLDWAKPK 645
>gi|26325114|dbj|BAC26311.1| unnamed protein product [Mus musculus]
Length = 707
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKE+F V ++++TDR TG SKGFGFV + S E+A+ A+
Sbjct: 568 SKTLFVKGLSENTTEETLKESFE---GSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 624
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
E M +DG + +D AK +
Sbjct: 625 EAMEDGEIDGNKVTLDWAKPK 645
>gi|395823283|ref|XP_003803977.1| PREDICTED: LOW QUALITY PROTEIN: nucleolin [Otolemur garnettii]
Length = 700
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKE+F V ++++TDR TG SKGFGFV + S E+A+ A+
Sbjct: 565 SKTLFVKGLSEDTTEETLKESF---DGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 621
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
E M +DG + +D AK +
Sbjct: 622 EAMEDGEIDGNKVTLDWAKPK 642
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 28 NSTLT--SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSI 85
NST + S L +S LS T+E L+E F + + KV ++ G+SKG+ F+ + S
Sbjct: 472 NSTWSGESKTLVLSNLSYSATEETLQEVFE---KATFIKVPQNQ-NGKSKGYAFIEFASF 527
Query: 86 EEAERAREGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
E+A+ A N + ++G I + E + P P QPS+ F
Sbjct: 528 EDAKEALNSCNKREIEGRAIRL------ELQAPRGSPNARSQPSKTLF 569
>gi|301764124|ref|XP_002917484.1| PREDICTED: nucleolin-like [Ailuropoda melanoleuca]
Length = 717
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKE+F V ++++TDR TG SKGFGFV + S E+A+ A+
Sbjct: 578 SKTLFVKGLSEDTTEETLKESF---DGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 634
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
E M +DG + +D AK +
Sbjct: 635 EAMEDGEIDGNKVTLDWAKPK 655
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S L +S LS T+E L+E F + + KV ++ G+SKG+ F+ + S E+A+ A
Sbjct: 492 SKTLVLSNLSYNATEETLQEVFE---KATFIKVPQNQ-NGKSKGYAFIEFASFEDAKEAL 547
Query: 93 EGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
N + ++G I + E + P P QPS+ F
Sbjct: 548 NSCNKREIEGRAIRL------ELQGPRGSPNARSQPSKTLF 582
>gi|255556984|ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223541388|gb|EEF42939.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 280
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 54/87 (62%)
Query: 30 TLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAE 89
+L RL+V LS + L+ F+ G++V +KV+ DR +GRS+GFGFV+Y+S EE E
Sbjct: 192 SLEGNRLYVGNLSWSVDNLALESFFSEQGKVVDAKVVYDRESGRSRGFGFVTYSSAEEVE 251
Query: 90 RAREGMNAKYLDGWVIFVDPAKSREAR 116
A + +N LDG I V A++R R
Sbjct: 252 NAIDSLNGAELDGRAIRVSVAEARPRR 278
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV L +L F G + +VI D+ TGRS+GFGFV+ +SI+E E A +
Sbjct: 93 KLFVGNLPFNVDSAQLAGLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSSIDEVEAAAQQ 152
Query: 95 MNAKYLDGWVIFVDPAKSREARPPP 119
N L+G + V+ PPP
Sbjct: 153 FNGYELEGRALRVNSG------PPP 171
>gi|384251873|gb|EIE25350.1| polyadenylate binding protein [Coccomyxa subellipsoidea C-169]
Length = 681
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V L D++L+ FAP G + +KV+ D A G+SKGFGFV Y+S EEA RA M
Sbjct: 318 LYVKNLVDEVDDDQLRAEFAPHGTITSAKVMKDSA-GKSKGFGFVCYSSPEEATRAVTEM 376
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K L G ++V A+ RE R
Sbjct: 377 NGKMLLGKPMYVALAQRREVR 397
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L + F FG ++ KV TD A G SKG+GFV Y E A+ A E +
Sbjct: 125 IFIKNLDKDIDNKALHDTFTAFGTILSCKVATDLA-GNSKGYGFVHYEKEEAAQLAIEKV 183
Query: 96 NAKYLDGWVIFVDPAKSREARP 117
N L+G +FV P R RP
Sbjct: 184 NGMLLEGKKVFVGPFLKRTERP 205
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+FV LS TDE++++ F G + ++ D A G+SKGFGF+++ E A A +
Sbjct: 215 VFVKNLSENLTDEEVEKMFNEHGMVTSFAIMKDEA-GKSKGFGFINFEDAEGAHAAVTAL 273
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K +DG ++ A+ + R
Sbjct: 274 NGKEIDGKELYCGRAQKKAER 294
>gi|167630741|ref|YP_001681240.1| RNA binding protein [Heliobacterium modesticaldum Ice1]
gi|167593481|gb|ABZ85229.1| RNA binding protein [Heliobacterium modesticaldum Ice1]
Length = 86
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V L T E L E F+P+G+++ S++ITDR TGRS+GFGFV E+AER E M
Sbjct: 7 LYVGNLPWATKPENLTELFSPYGEVLSSRIITDRETGRSRGFGFVEVRD-EDAERMVEAM 65
Query: 96 NAKYLDGWVIFVDPAKSRE 114
N +G ++ V+ AK R+
Sbjct: 66 NGAEYEGRMLTVNEAKPRQ 84
>gi|119591366|gb|EAW70960.1| nucleolin, isoform CRA_a [Homo sapiens]
Length = 490
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKE+F V ++++TDR TG SKGFGFV + S E+A+ A+
Sbjct: 351 SKTLFVKGLSEDTTEETLKESF---DGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 407
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
E M +DG + +D AK +
Sbjct: 408 EAMEDGEIDGNKVTLDWAKPK 428
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 28 NSTLT--SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSI 85
NST + S L +S LS T+E L+E F + + KV ++ G+SKG+ F+ + S
Sbjct: 258 NSTWSGESKTLVLSNLSYSATEETLQEVFE---KATFIKVPQNQ-NGKSKGYAFIEFASF 313
Query: 86 EEAERAREGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
E+A+ A N + ++G I + E + P P QPS+ F
Sbjct: 314 EDAKEALNSCNKREIEGRAIRL------ELQGPRGSPNARSQPSKTLF 355
>gi|148708277|gb|EDL40224.1| nucleolin, isoform CRA_e [Mus musculus]
Length = 706
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKE+F V ++++TDR TG SKGFGFV + S E+A+ A+
Sbjct: 567 SKTLFVKGLSEDTTEETLKESFE---GSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 623
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
E M +DG + +D AK +
Sbjct: 624 EAMEDGEIDGNKVTLDWAKPK 644
>gi|302781458|ref|XP_002972503.1| hypothetical protein SELMODRAFT_26372 [Selaginella moellendorffii]
gi|300159970|gb|EFJ26589.1| hypothetical protein SELMODRAFT_26372 [Selaginella moellendorffii]
Length = 107
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 55/88 (62%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V+GLS T+ L+E FA G+++ ++TD T S+GFGFV+ ++E+A+R + +
Sbjct: 13 LYVTGLSTRVTESWLEEYFAKEGKVIECCLVTDPLTRESRGFGFVTMDTVEDADRCIKYL 72
Query: 96 NAKYLDGWVIFVDPAKSREARPPPPPPY 123
+ LDG I V+ AK + AR P P Y
Sbjct: 73 HRSNLDGRSITVEKAKRKRARTPTPGKY 100
>gi|148708273|gb|EDL40220.1| nucleolin, isoform CRA_a [Mus musculus]
Length = 537
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 51/79 (64%), Gaps = 3/79 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKE+F V ++++TDR TG SKGFGFV + S E+A+ A+
Sbjct: 398 SKTLFVKGLSEDTTEETLKESFEGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 454
Query: 93 EGMNAKYLDGWVIFVDPAK 111
E M +DG + +D AK
Sbjct: 455 EAMEDGEIDGNKVTLDWAK 473
>gi|406911424|gb|EKD51218.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 125
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 53/91 (58%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S +L++ L D +L+ FG++V ++VI D+ GRSKGFGFV + EEA++A
Sbjct: 2 SKKLYIGNLPYSVDDAQLESMAVAFGEVVSAQVIQDKFNGRSKGFGFVEMANDEEAQKAI 61
Query: 93 EGMNAKYLDGWVIFVDPAKSREARPPPPPPY 123
+ +N K +DG I V+ A+ E R P+
Sbjct: 62 DDLNNKEIDGRKIIVNEARPMEKRDGDRKPF 92
>gi|118474079|ref|YP_892397.1| RNA-binding region RNP-1 [Campylobacter fetus subsp. fetus 82-40]
gi|424821065|ref|ZP_18246103.1| RNA-binding region RNP-1 [Campylobacter fetus subsp. venerealis
NCTC 10354]
gi|118413305|gb|ABK81725.1| RNA-binding region RNP-1 [Campylobacter fetus subsp. fetus 82-40]
gi|342327844|gb|EGU24328.1| RNA-binding region RNP-1 [Campylobacter fetus subsp. venerealis
NCTC 10354]
Length = 82
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 53/79 (67%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++V LS T+ +L+E F+ FG++ +K++ D+ T RSKGFGFV +S E+A++A EG
Sbjct: 4 IYVGNLSYRMTESELREVFSSFGEVTRAKIVKDKETNRSKGFGFVEMSSDEQAKKAIEGT 63
Query: 96 NAKYLDGWVIFVDPAKSRE 114
N K + G + V+ A+ R+
Sbjct: 64 NGKEVGGRALRVNEARPRD 82
>gi|393217699|gb|EJD03188.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 142
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 57/87 (65%), Gaps = 3/87 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
+ +++V LS TTD+ L++AF+ +GQ+V S V+ DR TGRS+GFGFV+++S EA A
Sbjct: 2 TAKVYVGNLSWNTTDDTLRKAFSDYGQVVDSIVMRDRDTGRSRGFGFVTFSSETEATGAI 61
Query: 93 EGMNAKYLDGWVIFVDPAKSREARPPP 119
+N + +G I V+ A ARP P
Sbjct: 62 SALNEQEFEGRRIKVNFAN---ARPQP 85
>gi|387050|gb|AAA36966.1| nucleolin, C23, partial [Cricetulus griseus]
Length = 679
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKE+F V ++++TDR TG SKGFGFV + S E+A+ A+
Sbjct: 536 SKTLFVKGLSEDTTEETLKESFEGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 592
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
E M +DG + +D AK +
Sbjct: 593 EAMEDGEIDGNKVTLDWAKPK 613
Score = 38.9 bits (89), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 12/108 (11%)
Query: 28 NSTLT--SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSI 85
NST + S L +S LS T+E L+E F + + KV ++ G+SKG+ F+ + S
Sbjct: 443 NSTWSGESKTLVLSNLSYSATEETLQEVFE---KATFIKVPQNQ-QGKSKGYAFIEFASF 498
Query: 86 EEAERAREGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
E+A+ A N ++G I + E + P P QPS+ F
Sbjct: 499 EDAKEALNSCNKMEIEGRTIRL------ELQGPRGSPNARSQPSKTLF 540
>gi|74214426|dbj|BAE40448.1| unnamed protein product [Mus musculus]
gi|74219790|dbj|BAE40485.1| unnamed protein product [Mus musculus]
Length = 707
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKE+F V ++++TDR TG SKGFGFV + S E+A+ A+
Sbjct: 568 SKTLFVKGLSEDTTEETLKESFE---GSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 624
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
E M +DG + +D AK +
Sbjct: 625 EAMEDGEIDGNKVTLDWAKPK 645
>gi|84875537|ref|NP_035010.3| nucleolin [Mus musculus]
gi|128843|sp|P09405.2|NUCL_MOUSE RecName: Full=Nucleolin; AltName: Full=Protein C23
gi|12802527|gb|AAK07920.1|AF318184_1 nucleolin [Mus musculus]
gi|53454|emb|CAA30538.1| nucleolin [Mus musculus]
gi|26350437|dbj|BAC38858.1| unnamed protein product [Mus musculus]
gi|74179984|dbj|BAE36542.1| unnamed protein product [Mus musculus]
gi|74194436|dbj|BAE37270.1| unnamed protein product [Mus musculus]
gi|74201341|dbj|BAE26119.1| unnamed protein product [Mus musculus]
gi|148708278|gb|EDL40225.1| nucleolin, isoform CRA_f [Mus musculus]
Length = 707
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKE+F V ++++TDR TG SKGFGFV + S E+A+ A+
Sbjct: 568 SKTLFVKGLSEDTTEETLKESFE---GSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 624
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
E M +DG + +D AK +
Sbjct: 625 EAMEDGEIDGNKVTLDWAKPK 645
>gi|13529464|gb|AAH05460.1| Nucleolin [Mus musculus]
Length = 707
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKE+F V ++++TDR TG SKGFGFV + S E+A+ A+
Sbjct: 568 SKTLFVKGLSEDTTEETLKESFE---GSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 624
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
E M +DG + +D AK +
Sbjct: 625 EAMEDGEIDGNKVTLDWAKPK 645
>gi|345790650|ref|XP_850477.2| PREDICTED: nucleolin isoform 1 [Canis lupus familiaris]
Length = 715
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKE+F V ++++TDR TG SKGFGFV + S E+A+ A+
Sbjct: 576 SKTLFVKGLSEDTTEETLKESF---DGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 632
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
E M +DG + +D AK +
Sbjct: 633 EAMEDGEIDGNKVTLDWAKPK 653
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 28 NSTLT--SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSI 85
NST + S L +S LS T+E L+E F + + KV ++ G+SKG+ F+ + S
Sbjct: 483 NSTWSGESKTLVLSNLSYSATEETLQEVFE---KATFIKVPQNQ-NGKSKGYAFIEFASF 538
Query: 86 EEAERAREGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
E+A+ A N + ++G I + E + P P QPS+ F
Sbjct: 539 EDAKEALNSCNKREIEGRAIRL------ELQGPRGSPNARSQPSKTLF 580
>gi|296134005|ref|YP_003641252.1| RNP-1 like RNA-binding protein [Thermincola potens JR]
gi|296032583|gb|ADG83351.1| RNP-1 like RNA-binding protein [Thermincola potens JR]
Length = 170
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Query: 7 FRRALSSGSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVI 66
++ + +S+ S + I + L+V L T E+L EAFA G++V S++I
Sbjct: 60 YQHSTKGWASVFVSVVAEIEREVKVLVRTLYVGNLPWATKPEELAEAFAAHGKVVGSRII 119
Query: 67 TDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSR 113
TDR TGRS+GFGFV E+A+R MN K +G V+ V+ AK R
Sbjct: 120 TDRETGRSRGFGFVEVED-EDADRLIAEMNGKEFNGRVLTVNEAKPR 165
>gi|225706362|gb|ACO09027.1| Cold-inducible RNA-binding protein [Osmerus mordax]
Length = 172
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 50/76 (65%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ VI DR T RS+GFGFV++ + +EA+ A
Sbjct: 6 KLFVGGLSFDTNEQSLEDVFSKYGQISEVVVIKDRETQRSRGFGFVTFDNPDEAKDAMLA 65
Query: 95 MNAKYLDGWVIFVDPA 110
MN K LDG I VD A
Sbjct: 66 MNGKSLDGRQIRVDQA 81
>gi|74177681|dbj|BAE38940.1| unnamed protein product [Mus musculus]
Length = 707
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKE+F V ++++TDR TG SKGFGFV + S E+A+ A+
Sbjct: 568 SKTLFVKGLSEDTTEETLKESFE---GSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 624
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
E M +DG + +D AK +
Sbjct: 625 EAMEDGEIDGNKVTLDWAKPK 645
>gi|402889645|ref|XP_003908119.1| PREDICTED: nucleolin isoform 2 [Papio anubis]
Length = 683
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKE+F V ++++TDR TG SKGFGFV + S E+A+ A+
Sbjct: 544 SKTLFVKGLSEDTTEETLKESF---DGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 600
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
E M +DG + +D AK +
Sbjct: 601 EAMEDGEIDGNKVTLDWAKPK 621
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 28 NSTLT--SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSI 85
NST + S L +S LS T+E L+E F + + KV ++ G+SKG+ F+ + S
Sbjct: 451 NSTWSGESKTLVLSNLSYSATEETLQEVFE---KATFIKVPQNQ-NGKSKGYAFIEFASF 506
Query: 86 EEAERAREGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
E+A+ A N + ++G I + E + P P QPS+ F
Sbjct: 507 EDAKEALNSCNKREIEGRAIRL------ELQGPRGSPNARSQPSKTLF 548
>gi|149016333|gb|EDL75579.1| nucleolin, isoform CRA_d [Rattus norvegicus]
gi|149016334|gb|EDL75580.1| nucleolin, isoform CRA_d [Rattus norvegicus]
Length = 496
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 51/79 (64%), Gaps = 3/79 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKE+F V ++++TDR TG SKGFGFV + S E+A+ A+
Sbjct: 357 SKTLFVKGLSEDTTEETLKESFEGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 413
Query: 93 EGMNAKYLDGWVIFVDPAK 111
E M +DG + +D AK
Sbjct: 414 EAMEDGEIDGNKVTLDWAK 432
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 28 NSTLT--SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSI 85
NST + S L +S LS T+E L+E F + + KV + G+SKG+ F+ + S
Sbjct: 264 NSTWSGESKTLVLSNLSYSATEETLQEVFE---KATFIKVPQN-PHGKSKGYAFIEFASF 319
Query: 86 EEAERAREGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
E+A+ A N ++G I + E + P P QPS+ F
Sbjct: 320 EDAKEALNSCNKMEIEGRTIRL------ELQGPRGSPNARSQPSKTLF 361
>gi|128842|sp|P08199.2|NUCL_MESAU RecName: Full=Nucleolin; AltName: Full=Protein C23
Length = 714
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKE+F V ++++TDR TG SKGFGFV + S E+A+ A+
Sbjct: 571 SKTLFVKGLSEDTTEETLKESFE---GSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 627
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
E M +DG + +D AK +
Sbjct: 628 EAMEDGEIDGNKVTLDWAKPK 648
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 12/108 (11%)
Query: 28 NSTLT--SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSI 85
NST + S L +S LS T+E L+E F + + KV ++ G+SKG+ F+ + S
Sbjct: 478 NSTWSGESKTLVLSNLSYSATEETLQEVFE---KATFIKVPQNQ-QGKSKGYAFIEFASF 533
Query: 86 EEAERAREGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
E+A+ A N ++G I + E + P P QPS+ F
Sbjct: 534 EDAKEALNSCNKMEIEGRTIRL------ELQGPRGSPNARSQPSKTLF 575
>gi|355761078|gb|EHH61752.1| hypothetical protein EGM_19839, partial [Macaca fascicularis]
Length = 705
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKE+F V ++++TDR TG SKGFGFV + S E+A+ A+
Sbjct: 566 SKTLFVKGLSEDTTEETLKESF---DGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 622
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
E M +DG + +D AK +
Sbjct: 623 EAMEDGEIDGNKVTLDWAKPK 643
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 28 NSTLT--SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSI 85
NST + S L +S LS T+E L+E F + + KV ++ G+SKG+ F+ + S
Sbjct: 473 NSTWSGESKTLVLSNLSYSATEETLQEVFE---KATFIKVPQNQ-NGKSKGYAFIEFASF 528
Query: 86 EEAERAREGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
E+A+ A N + ++G I + E + P P QPS+ F
Sbjct: 529 EDAKEALNSCNKREIEGRAIRL------ELQGPRGSPNARSQPSKTLF 570
>gi|308475439|ref|XP_003099938.1| hypothetical protein CRE_24556 [Caenorhabditis remanei]
gi|308266205|gb|EFP10158.1| hypothetical protein CRE_24556 [Caenorhabditis remanei]
Length = 408
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 45/66 (68%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS KL+EAF PFG++ +K+I D AT ++KG+GFVSY E+AERA E
Sbjct: 133 HVFVGDLSAEIDSTKLREAFLPFGEVSEAKIIRDNATNKAKGYGFVSYPRREDAERAIEQ 192
Query: 95 MNAKYL 100
MN ++L
Sbjct: 193 MNGQWL 198
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 33 SPR-LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERA 91
PR LFV L TDE L F G + +K+I D G + F FV ++ +A +A
Sbjct: 36 DPRTLFVGNLDPAITDEFLATLFNQIGAVTKAKIIFDCFQGLNDPFAFVEFSDHNQASQA 95
Query: 92 REGMNAKYL 100
+ MN + L
Sbjct: 96 LQSMNGRQL 104
>gi|148708274|gb|EDL40221.1| nucleolin, isoform CRA_b [Mus musculus]
Length = 488
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 51/79 (64%), Gaps = 3/79 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKE+F V ++++TDR TG SKGFGFV + S E+A+ A+
Sbjct: 352 SKTLFVKGLSEDTTEETLKESFEGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 408
Query: 93 EGMNAKYLDGWVIFVDPAK 111
E M +DG + +D AK
Sbjct: 409 EAMEDGEIDGNKVTLDWAK 427
>gi|20067397|emb|CAC84501.1| putative nucleolin [Triturus carnifex]
Length = 338
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 54/84 (64%), Gaps = 3/84 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKEAF V ++++TDR +G SKGFGFV +++ E+A A+
Sbjct: 198 SKTLFVRGLSADTTEETLKEAFDG---AVGTRIVTDRDSGASKGFGFVDFSTAEDASAAK 254
Query: 93 EGMNAKYLDGWVIFVDPAKSREAR 116
E M +DG + V+ A+S+ R
Sbjct: 255 EAMEDGEIDGNKVTVEFAQSKRER 278
>gi|128844|sp|P13383.3|NUCL_RAT RecName: Full=Nucleolin; AltName: Full=Protein C23
gi|205792|gb|AAA41732.1| nucleolin [Rattus norvegicus]
Length = 713
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKE+F V ++++TDR TG SKGFGFV + S E+A+ A+
Sbjct: 574 SKTLFVKGLSEDTTEETLKESFE---GSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 630
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
E M +DG + +D AK +
Sbjct: 631 EAMEDGEIDGNKVTLDWAKPK 651
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 28 NSTLT--SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSI 85
NST + S L +S LS T+E L+E F + + KV + G+SKG+ F+ + S
Sbjct: 481 NSTWSGESKTLVLSNLSYSATEETLQEVFE---KATFIKVPQN-PHGKSKGYAFIEFASF 536
Query: 86 EEAERAREGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
E+A+ A N ++G I + E + P P QPS+ F
Sbjct: 537 EDAKEALNSCNKMEIEGRTIRL------ELQGPRGSPNARSQPSKTLF 578
>gi|402889643|ref|XP_003908118.1| PREDICTED: nucleolin isoform 1 [Papio anubis]
Length = 695
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKE+F V ++++TDR TG SKGFGFV + S E+A+ A+
Sbjct: 556 SKTLFVKGLSEDTTEETLKESF---DGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 612
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
E M +DG + +D AK +
Sbjct: 613 EAMEDGEIDGNKVTLDWAKPK 633
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 28 NSTLT--SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSI 85
NST + S L +S LS T+E L+E F + + KV ++ G+SKG+ F+ + S
Sbjct: 463 NSTWSGESKTLVLSNLSYSATEETLQEVFE---KATFIKVPQNQ-NGKSKGYAFIEFASF 518
Query: 86 EEAERAREGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
E+A+ A N + ++G I + E + P P QPS+ F
Sbjct: 519 EDAKEALNSCNKREIEGRAIRL------ELQGPRGSPNARSQPSKTLF 560
>gi|325279405|ref|YP_004251947.1| RNP-1 like RNA-binding protein [Odoribacter splanchnicus DSM 20712]
gi|324311214|gb|ADY31767.1| RNP-1 like RNA-binding protein [Odoribacter splanchnicus DSM 20712]
Length = 106
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 49/83 (59%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++S LS D LK+ F +G++ +KVITDR TGRS+GFGFV + ++A + +
Sbjct: 3 IYISNLSYAVNDGDLKDLFGEYGEISSAKVITDRETGRSRGFGFVEMADDAQGQKAIDEL 62
Query: 96 NAKYLDGWVIFVDPAKSREARPP 118
N DG VI V A+ R RP
Sbjct: 63 NQAEYDGKVINVTVARPRTERPA 85
>gi|161760644|ref|NP_036881.2| nucleolin [Rattus norvegicus]
gi|55250726|gb|AAH85751.1| Nucleolin [Rattus norvegicus]
gi|149016332|gb|EDL75578.1| nucleolin, isoform CRA_c [Rattus norvegicus]
Length = 714
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKE+F V ++++TDR TG SKGFGFV + S E+A+ A+
Sbjct: 575 SKTLFVKGLSEDTTEETLKESFE---GSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 631
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
E M +DG + +D AK +
Sbjct: 632 EAMEDGEIDGNKVTLDWAKPK 652
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 28 NSTLT--SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSI 85
NST + S L +S LS T+E L+E F + + KV + G+SKG+ F+ + S
Sbjct: 482 NSTWSGESKTLVLSNLSYSATEETLQEVFE---KATFIKVPQN-PHGKSKGYAFIEFASF 537
Query: 86 EEAERAREGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
E+A+ A N ++G I + E + P P QPS+ F
Sbjct: 538 EDAKEALNSCNKMEIEGRTIRL------ELQGPRGSPNARSQPSKTLF 579
>gi|354502803|ref|XP_003513471.1| PREDICTED: nucleolin [Cricetulus griseus]
Length = 762
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKE+F V ++++TDR TG SKGFGFV + S E+A+ A+
Sbjct: 620 SKTLFVKGLSEDTTEETLKESFEGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 676
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
E M +DG + +D AK +
Sbjct: 677 EAMEDGEIDGNKVTLDWAKPK 697
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 12/108 (11%)
Query: 28 NSTLT--SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSI 85
NST + S L +S LS T+E L+E F + + KV ++ G+SKG+ F+ + S
Sbjct: 527 NSTWSGESKTLVLSNLSYSATEETLQEVFE---KATFIKVPQNQ-QGKSKGYAFIEFASF 582
Query: 86 EEAERAREGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
E+A+ A N ++G I + E + P P QPS+ F
Sbjct: 583 EDAKEALNSCNKMEIEGRTIRL------ELQGPRGSPNARSQPSKTLF 624
>gi|337281472|ref|YP_004620944.1| glycine-rich RNA binding protein [Ramlibacter tataouinensis TTB310]
gi|334732549|gb|AEG94925.1| Candidate glycine-rich RNA binding protein [Ramlibacter
tataouinensis TTB310]
Length = 159
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 51/83 (61%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V L D L++AF+ FG + +KV+ +R TGRSKGFGFV S EA+ A G
Sbjct: 4 KLYVGNLPYSVRDSDLEQAFSQFGAVSSAKVMMERDTGRSKGFGFVEMGSDAEAQAAING 63
Query: 95 MNAKYLDGWVIFVDPAKSREARP 117
MN + L G + V+ A+ E+RP
Sbjct: 64 MNGQPLGGRSVVVNEARPMESRP 86
>gi|426338868|ref|XP_004033393.1| PREDICTED: nucleolin [Gorilla gorilla gorilla]
Length = 710
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKE+F V ++++TDR TG SKGFGFV + S E+A+ A+
Sbjct: 571 SKTLFVKGLSEDTTEETLKESF---DGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 627
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
E M +DG + +D AK +
Sbjct: 628 EAMEDGEIDGNKVTLDWAKPK 648
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 28 NSTLT--SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSI 85
NST + S L +S LS T+E L+E F + + KV ++ G+SKG+ F+ + S
Sbjct: 478 NSTWSGESKTLVLSNLSYSATEETLQEVFE---KATFIKVPQNQ-NGKSKGYAFIEFASF 533
Query: 86 EEAERAREGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
E+A+ A N + ++G I + E + P P QPS+ F
Sbjct: 534 EDAKEALNSCNKREIEGRAIRL------ELQGPRGSPNARSQPSKTLF 575
>gi|387047|gb|AAA36961.1| nucleolin, partial [Cricetus cricetus]
Length = 192
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 51/79 (64%), Gaps = 3/79 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKE+F V ++++TDR TG SKGFGFV + S E+A+ A+
Sbjct: 49 SKTLFVKGLSEDTTEETLKESFEG---SVRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 105
Query: 93 EGMNAKYLDGWVIFVDPAK 111
E M +DG + +D AK
Sbjct: 106 EAMEDGEIDGNKVTLDWAK 124
>gi|395007942|ref|ZP_10391636.1| RRM domain-containing RNA-binding protein [Acidovorax sp. CF316]
gi|394314048|gb|EJE51000.1| RRM domain-containing RNA-binding protein [Acidovorax sp. CF316]
Length = 117
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S +++V L TD L+ F+ FG + +KV+ DR TGRSKGFGFV S E A+ A
Sbjct: 2 SSKIYVGNLPYSVTDSTLESNFSEFGNVTSAKVMMDRETGRSKGFGFVEMASAEVAQAAI 61
Query: 93 EGMNAKYLDGWVIFVDPAKSREAR 116
G++ +DG I V+ A+ RE R
Sbjct: 62 TGLHGMSVDGRSIVVNLARPREER 85
>gi|149016331|gb|EDL75577.1| nucleolin, isoform CRA_b [Rattus norvegicus]
Length = 698
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKE+F V ++++TDR TG SKGFGFV + S E+A+ A+
Sbjct: 559 SKTLFVKGLSEDTTEETLKESFE---GSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 615
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
E M +DG + +D AK +
Sbjct: 616 EAMEDGEIDGNKVTLDWAKPK 636
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 28 NSTLT--SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSI 85
NST + S L +S LS T+E L+E F + + KV + G+SKG+ F+ + S
Sbjct: 466 NSTWSGESKTLVLSNLSYSATEETLQEVFE---KATFIKVPQN-PHGKSKGYAFIEFASF 521
Query: 86 EEAERAREGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
E+A+ A N ++G I + E + P P QPS+ F
Sbjct: 522 EDAKEALNSCNKMEIEGRTIRL------ELQGPRGSPNARSQPSKTLF 563
>gi|319902685|ref|YP_004162413.1| RNP-1 like RNA-binding protein [Bacteroides helcogenes P 36-108]
gi|319417716|gb|ADV44827.1| RNP-1 like RNA-binding protein [Bacteroides helcogenes P 36-108]
Length = 102
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++++GL+ TTD L + F+ +G++ ++VITDR TGRS+GF FV E A++A + +
Sbjct: 3 IYIAGLNFSTTDADLNDLFSEYGEVSSARVITDRETGRSRGFAFVEMPDDEAAQKAIDEL 62
Query: 96 NAKYLDGWVIFVDPAKSREARP 117
N D I V+ A+ RE RP
Sbjct: 63 NGAEYDNKTISVNVARPREERP 84
>gi|149016335|gb|EDL75581.1| nucleolin, isoform CRA_e [Rattus norvegicus]
Length = 505
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 51/79 (64%), Gaps = 3/79 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKE+F V ++++TDR TG SKGFGFV + S E+A+ A+
Sbjct: 366 SKTLFVKGLSEDTTEETLKESFEGS---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 422
Query: 93 EGMNAKYLDGWVIFVDPAK 111
E M +DG + +D AK
Sbjct: 423 EAMEDGEIDGNKVTLDWAK 441
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 28 NSTLT--SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSI 85
NST + S L +S LS T+E L+E F + + KV + G+SKG+ F+ + S
Sbjct: 273 NSTWSGESKTLVLSNLSYSATEETLQEVFE---KATFIKVPQN-PHGKSKGYAFIEFASF 328
Query: 86 EEAERAREGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
E+A+ A N ++G I + E + P P QPS+ F
Sbjct: 329 EDAKEALNSCNKMEIEGRTIRL------ELQGPRGSPNARSQPSKTLF 370
>gi|410969636|ref|XP_003991299.1| PREDICTED: nucleolin [Felis catus]
Length = 715
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKE+F V ++++TDR TG SKGFGFV + S E+A+ A+
Sbjct: 576 SKTLFVKGLSEDTTEETLKESF---DGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 632
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
E M +DG + +D AK +
Sbjct: 633 EAMEDGEIDGNKVTLDWAKPK 653
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 28 NSTLT--SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSI 85
NST + S L +S LS T+E L+E F + + KV ++ G+SKG+ F+ + S
Sbjct: 483 NSTWSGESKTLVLSNLSYNATEETLQEVFE---KATFIKVPQNQ-NGKSKGYAFIEFASF 538
Query: 86 EEAERAREGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
E+A+ A N + ++G I + E + P P QPS+ F
Sbjct: 539 EDAKEALNSCNKREIEGRAIRL------ELQGPRGSPNARSQPSKTLF 580
>gi|332815667|ref|XP_516145.3| PREDICTED: nucleolin [Pan troglodytes]
Length = 711
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKE+F V ++++TDR TG SKGFGFV + S E+A+ A+
Sbjct: 572 SKTLFVKGLSEDTTEETLKESF---DGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 628
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
E M +DG + +D AK +
Sbjct: 629 EAMEDGEIDGNKVTLDWAKPK 649
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 28 NSTLT--SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSI 85
NST + S L +S LS T+E L+E F + + KV ++ G+SKG+ F+ + S
Sbjct: 479 NSTWSGESKTLVLSNLSYSATEETLQEVFE---KATFIKVPQNQ-NGKSKGYAFIEFASF 534
Query: 86 EEAERAREGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
E+A+ A N + ++G I + E + P P QPS+ F
Sbjct: 535 EDAKEALNSCNKREIEGRAIRL------ELQGPRGSPNARSQPSKTLF 576
>gi|170592088|ref|XP_001900801.1| RNA recognition motif. [Brugia malayi]
gi|158591668|gb|EDP30272.1| RNA recognition motif [Brugia malayi]
Length = 421
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 46/66 (69%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS ++ LK+AFAPFG++ +KVI D T +SKG+GFVSY EEAERA E
Sbjct: 163 HVFVGDLSPEVDNKALKDAFAPFGEVSDAKVIRDATTLKSKGYGFVSYPKREEAERAIEQ 222
Query: 95 MNAKYL 100
MN ++L
Sbjct: 223 MNGQWL 228
>gi|154338565|ref|XP_001565507.1| hypothetical protein, conserved [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062556|emb|CAM42420.1| hypothetical protein, conserved [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 681
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 58/109 (53%), Gaps = 5/109 (4%)
Query: 10 ALSSGSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDR 69
A+SSG ++ SQ S LFV GL D++L E F G++ +KV+ D
Sbjct: 213 AMSSGVTMPFSQPNDAEVRS-----NLFVCGLPVSVRDKELLELFEKHGEIESAKVMLDI 267
Query: 70 ATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREARPP 118
TGRS+G FV + SIE AE A + +N +++G I V A SR A P
Sbjct: 268 HTGRSRGIAFVKFKSIEHAENAVDALNGTHINGHQITVRVANSRAAYLP 316
>gi|426345476|ref|XP_004040437.1| PREDICTED: polyadenylate-binding protein 4-like [Gorilla gorilla
gorilla]
Length = 428
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DE+LK+ F+ +G+ + KV+TD ++G+SKGFGFVS+ S E A++A E M
Sbjct: 250 IYIKNFGGEMDDERLKDVFSKYGKTLSVKVMTD-SSGKSKGFGFVSFDSHEAAKKAVEEM 308
Query: 96 NAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSE 130
N + ++G +IFV A+ + R EQ E
Sbjct: 309 NGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRE 343
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L E F+ FG+++ SKV++D SKG+ FV + + A+RA E M
Sbjct: 158 VFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQG--SKGYAFVHFQNQSAADRAIEEM 215
Query: 96 NAKYLDGWVIFVDPAKSREARPPP 119
N K L G +FV K+R+ R
Sbjct: 216 NGKLLKGCKVFVGRFKNRKDREAE 239
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L++ L DEKL+ F+ FG + KV+ + G+SKGFG + ++S E+A +A
Sbjct: 352 KLYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQEE--GQSKGFGLICFSSPEDATKAMTE 409
Query: 95 MNAKYL 100
MN + L
Sbjct: 410 MNGRIL 415
>gi|12659074|gb|AAK01176.1| RNA-binding protein [Triticum aestivum]
Length = 183
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 50/83 (60%)
Query: 29 STLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEA 88
S R FV LS TTD LK+AF FG++ +KV+ D+ +GRS+GFGFV++ +
Sbjct: 2 SDADDYRCFVGSLSWNTTDVDLKDAFGKFGRVTETKVVLDKFSGRSRGFGFVTFDDKKAM 61
Query: 89 ERAREGMNAKYLDGWVIFVDPAK 111
E A E MN LDG I V+ A+
Sbjct: 62 EEAVEAMNGIDLDGRNITVERAQ 84
>gi|34534595|dbj|BAC87055.1| unnamed protein product [Homo sapiens]
Length = 603
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 51/79 (64%), Gaps = 3/79 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKE+F V ++++TDR TG SKGFGFV + S E+A+ A+
Sbjct: 464 SKTLFVKGLSEDTTEETLKESF---DGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 520
Query: 93 EGMNAKYLDGWVIFVDPAK 111
E M +DG + +D AK
Sbjct: 521 EAMEDGEIDGNKVTLDWAK 539
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 28 NSTLT--SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSI 85
NST + S L +S LS T+E L+E F + + KV ++ G+SKG+ F+ + S
Sbjct: 371 NSTWSGESKTLVLSNLSYSATEETLQEVFE---KATFIKVPQNQ-NGKSKGYAFIEFASF 426
Query: 86 EEAERAREGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
E+A+ A N + ++G I + E + P P QPS+ F
Sbjct: 427 EDAKEALNSCNKREIEGRAIRL------ELQGPRGSPNARSQPSKTLF 468
>gi|402889647|ref|XP_003908120.1| PREDICTED: nucleolin isoform 3 [Papio anubis]
Length = 634
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 51/79 (64%), Gaps = 3/79 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKE+F V ++++TDR TG SKGFGFV + S E+A+ A+
Sbjct: 495 SKTLFVKGLSEDTTEETLKESF---DGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 551
Query: 93 EGMNAKYLDGWVIFVDPAK 111
E M +DG + +D AK
Sbjct: 552 EAMEDGEIDGNKVTLDWAK 570
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 28 NSTLT--SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSI 85
NST + S L +S LS T+E L+E F + + KV ++ G+SKG+ F+ + S
Sbjct: 402 NSTWSGESKTLVLSNLSYSATEETLQEVFE---KATFIKVPQNQ-NGKSKGYAFIEFASF 457
Query: 86 EEAERAREGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
E+A+ A N + ++G I + E + P P QPS+ F
Sbjct: 458 EDAKEALNSCNKREIEGRAIRL------ELQGPRGSPNARSQPSKTLF 499
>gi|312086091|ref|XP_003144941.1| hypothetical protein LOAG_09365 [Loa loa]
Length = 394
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 46/66 (69%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS ++ LK+AFAPFG++ +KVI D T +SKG+GFVSY EEAERA E
Sbjct: 136 HVFVGDLSPEVDNKALKDAFAPFGEVSDAKVIRDATTLKSKGYGFVSYPKREEAERAIEQ 195
Query: 95 MNAKYL 100
MN ++L
Sbjct: 196 MNGQWL 201
>gi|197098386|ref|NP_001127178.1| nucleolin [Pongo abelii]
gi|75070972|sp|Q5RF26.3|NUCL_PONAB RecName: Full=Nucleolin
gi|55725699|emb|CAH89631.1| hypothetical protein [Pongo abelii]
Length = 712
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKE+F V ++++TDR TG SKGFGFV + S E+A+ A+
Sbjct: 573 SKTLFVKGLSEDTTEETLKESF---DGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 629
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
E M +DG + +D AK +
Sbjct: 630 EAMEDGEIDGNKVTLDWAKPK 650
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 28 NSTLT--SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSI 85
NST + S L +S LS T+E L+E F + + KV ++ G+SKG+ F+ + S
Sbjct: 480 NSTWSGESKTLVLSNLSYSATEETLQEVFE---KATFIKVPQNQ-NGKSKGYAFIEFASF 535
Query: 86 EEAERAREGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
E+A+ A N + ++G I + E + P P QPS+ F
Sbjct: 536 EDAKEALNSCNKREIEGRAIRL------ELQGPRGSPNARSQPSKTLF 577
>gi|397502540|ref|XP_003821912.1| PREDICTED: nucleolin-like [Pan paniscus]
Length = 710
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKE+F V ++++TDR TG SKGFGFV + S E+A+ A+
Sbjct: 571 SKTLFVKGLSEDTTEETLKESF---DGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 627
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
E M +DG + +D AK +
Sbjct: 628 EAMEDGEIDGNKVTLDWAKPK 648
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 28 NSTLT--SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSI 85
NST + S L +S LS T+E L+E F + + KV ++ G+SKG+ F+ + S
Sbjct: 478 NSTWSGESKTLVLSNLSYSATEETLQEVFE---KATFIKVPQNQ-NGKSKGYAFIEFASF 533
Query: 86 EEAERAREGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
E+A+ A N + ++G I + E + P P QPS+ F
Sbjct: 534 EDAKEALNSCNKREIEGRAIRL------ELQGPRGSPNARSQPSKTLF 575
>gi|329956785|ref|ZP_08297354.1| hypothetical protein HMPREF9445_02226 [Bacteroides clarus YIT
12056]
gi|328523824|gb|EGF50911.1| hypothetical protein HMPREF9445_02226 [Bacteroides clarus YIT
12056]
Length = 99
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 51/88 (57%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++SGLS + L FA FG++ +KVI DR TGRS+GF FV ++ E ++A + +
Sbjct: 3 IYISGLSYGVNNADLTNLFAEFGEVSSAKVILDRETGRSRGFAFVEMSNDTEGQKAIDEL 62
Query: 96 NAKYLDGWVIFVDPAKSREARPPPPPPY 123
N D VI V A+ RE RP P+
Sbjct: 63 NGVEYDSKVISVSVARPREERPSNSRPH 90
>gi|281349809|gb|EFB25393.1| hypothetical protein PANDA_005719 [Ailuropoda melanoleuca]
Length = 645
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 51/79 (64%), Gaps = 3/79 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKE+F V ++++TDR TG SKGFGFV + S E+A+ A+
Sbjct: 534 SKTLFVKGLSEDTTEETLKESF---DGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 590
Query: 93 EGMNAKYLDGWVIFVDPAK 111
E M +DG + +D AK
Sbjct: 591 EAMEDGEIDGNKVTLDWAK 609
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S L +S LS T+E L+E F + + KV ++ G+SKG+ F+ + S E+A+ A
Sbjct: 448 SKTLVLSNLSYNATEETLQEVFE---KATFIKVPQNQ-NGKSKGYAFIEFASFEDAKEAL 503
Query: 93 EGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
N + ++G I + E + P P QPS+ F
Sbjct: 504 NSCNKREIEGRAIRL------ELQGPRGSPNARSQPSKTLF 538
>gi|197308346|gb|ACH60524.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308348|gb|ACH60525.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308350|gb|ACH60526.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308352|gb|ACH60527.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308354|gb|ACH60528.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308356|gb|ACH60529.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308358|gb|ACH60530.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308362|gb|ACH60532.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308364|gb|ACH60533.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308366|gb|ACH60534.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308368|gb|ACH60535.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308370|gb|ACH60536.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308372|gb|ACH60537.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308374|gb|ACH60538.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308376|gb|ACH60539.1| glycine-rich RNA-binding protein [Pseudotsuga menziesii]
gi|197308378|gb|ACH60540.1| glycine-rich RNA-binding protein [Pseudotsuga macrocarpa]
Length = 71
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GL+ T D L+EAF+P+G++V SK+I+DR TGRS+GFGFV++ + A +
Sbjct: 9 RCFVGGLAWSTDDRSLQEAFSPYGEVVESKIISDRETGRSRGFGFVTFNDEQSMRDAIDA 68
Query: 95 MN 96
MN
Sbjct: 69 MN 70
>gi|55956788|ref|NP_005372.2| nucleolin [Homo sapiens]
gi|90110781|sp|P19338.3|NUCL_HUMAN RecName: Full=Nucleolin; AltName: Full=Protein C23
gi|62988860|gb|AAY24247.1| unknown [Homo sapiens]
gi|119591367|gb|EAW70961.1| nucleolin, isoform CRA_b [Homo sapiens]
gi|119591369|gb|EAW70963.1| nucleolin, isoform CRA_b [Homo sapiens]
gi|168277892|dbj|BAG10924.1| nucleolin [synthetic construct]
Length = 710
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKE+F V ++++TDR TG SKGFGFV + S E+A+ A+
Sbjct: 571 SKTLFVKGLSEDTTEETLKESF---DGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 627
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
E M +DG + +D AK +
Sbjct: 628 EAMEDGEIDGNKVTLDWAKPK 648
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 28 NSTLT--SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSI 85
NST + S L +S LS T+E L+E F + + KV ++ G+SKG+ F+ + S
Sbjct: 478 NSTWSGESKTLVLSNLSYSATEETLQEVFE---KATFIKVPQNQ-NGKSKGYAFIEFASF 533
Query: 86 EEAERAREGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
E+A+ A N + ++G I + E + P P QPS+ F
Sbjct: 534 EDAKEALNSCNKREIEGRAIRL------ELQGPRGSPNARSQPSKTLF 575
>gi|403278071|ref|XP_003930653.1| PREDICTED: nucleolin-like [Saimiri boliviensis boliviensis]
Length = 713
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKE+F V ++++TDR TG SKGFGFV + S E+A+ A+
Sbjct: 574 SKTLFVKGLSEDTTEETLKESF---DGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 630
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
E M +DG + +D AK +
Sbjct: 631 EAMEDGEIDGNKVTLDWAKPK 651
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S L +S LS T+E L+E F + + KV ++ G+SKG+ F+ + S E+A+ A
Sbjct: 488 SKTLVLSNLSYSATEETLQEVFE---KATFIKVPQNQ-NGKSKGYAFIEFASFEDAKEAL 543
Query: 93 EGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
N + ++G I + E + P P QPS+ F
Sbjct: 544 NSCNKREIEGRAIRL------ELQGPRGSPNARSQPSKTLF 578
>gi|393909208|gb|EFO19127.2| hypothetical protein LOAG_09365 [Loa loa]
Length = 421
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 46/66 (69%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS ++ LK+AFAPFG++ +KVI D T +SKG+GFVSY EEAERA E
Sbjct: 163 HVFVGDLSPEVDNKALKDAFAPFGEVSDAKVIRDATTLKSKGYGFVSYPKREEAERAIEQ 222
Query: 95 MNAKYL 100
MN ++L
Sbjct: 223 MNGQWL 228
>gi|343961999|dbj|BAK62587.1| nucleolin [Pan troglodytes]
Length = 537
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 51/79 (64%), Gaps = 3/79 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKE+F V ++++TDR TG SKGFGFV + S E+A+ A+
Sbjct: 398 SKTLFVKGLSEDTTEETLKESF---DGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 454
Query: 93 EGMNAKYLDGWVIFVDPAK 111
E M +DG + +D AK
Sbjct: 455 EAMEDGEIDGNKVTLDWAK 473
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 28 NSTLT--SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSI 85
NST + S L +S LS T+E L+E F + + KV ++ G+SKG+ F+ + S
Sbjct: 305 NSTWSGESKTLVLSNLSYSATEETLQEVFE---KATFIKVPQNQ-NGKSKGYAFIEFASF 360
Query: 86 EEAERAREGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
E+A+ A N + ++G I + E + P P QPS+ F
Sbjct: 361 EDAKEALNSCNKREIEGRAIRL------ELQGPRGSPNARSQPSKTLF 402
>gi|53714011|ref|YP_100003.1| RNA-binding protein [Bacteroides fragilis YCH46]
gi|60682207|ref|YP_212351.1| RNA-binding protein [Bacteroides fragilis NCTC 9343]
gi|265764361|ref|ZP_06092929.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|336410386|ref|ZP_08590866.1| hypothetical protein HMPREF1018_02883 [Bacteroides sp. 2_1_56FAA]
gi|375359004|ref|YP_005111776.1| putative RNA-binding protein [Bacteroides fragilis 638R]
gi|423250510|ref|ZP_17231526.1| hypothetical protein HMPREF1066_02536 [Bacteroides fragilis
CL03T00C08]
gi|423256011|ref|ZP_17236940.1| hypothetical protein HMPREF1067_03584 [Bacteroides fragilis
CL03T12C07]
gi|423271876|ref|ZP_17250846.1| hypothetical protein HMPREF1079_03928 [Bacteroides fragilis
CL05T00C42]
gi|423276340|ref|ZP_17255281.1| hypothetical protein HMPREF1080_03934 [Bacteroides fragilis
CL05T12C13]
gi|423283895|ref|ZP_17262779.1| hypothetical protein HMPREF1204_02317 [Bacteroides fragilis HMW
615]
gi|52216876|dbj|BAD49469.1| putative RNA-binding protein [Bacteroides fragilis YCH46]
gi|60493641|emb|CAH08430.1| putative RNA-binding protein [Bacteroides fragilis NCTC 9343]
gi|263256969|gb|EEZ28315.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|301163685|emb|CBW23239.1| putative RNA-binding protein [Bacteroides fragilis 638R]
gi|335945442|gb|EGN07255.1| hypothetical protein HMPREF1018_02883 [Bacteroides sp. 2_1_56FAA]
gi|392650093|gb|EIY43765.1| hypothetical protein HMPREF1067_03584 [Bacteroides fragilis
CL03T12C07]
gi|392652819|gb|EIY46477.1| hypothetical protein HMPREF1066_02536 [Bacteroides fragilis
CL03T00C08]
gi|392696732|gb|EIY89924.1| hypothetical protein HMPREF1079_03928 [Bacteroides fragilis
CL05T00C42]
gi|392697381|gb|EIY90566.1| hypothetical protein HMPREF1080_03934 [Bacteroides fragilis
CL05T12C13]
gi|404580441|gb|EKA85150.1| hypothetical protein HMPREF1204_02317 [Bacteroides fragilis HMW
615]
Length = 122
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 50/82 (60%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F++G+S ++ L E F FG+++ +K++ DR TGRSKGFGFV + EE A +
Sbjct: 3 IFIAGISYNLSNADLGELFEEFGEVISAKIVMDRETGRSKGFGFVEMPNDEEGNAAIAAL 62
Query: 96 NAKYLDGWVIFVDPAKSREARP 117
N K +DG + V A+ RE P
Sbjct: 63 NEKEIDGKTLAVSVARPREEGP 84
>gi|375146726|ref|YP_005009167.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
gi|361060772|gb|AEV99763.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
Length = 104
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 52/82 (63%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++VS LS DE LK+ FAP+G++ +KVITDR TGRS+GFGFV + +++A +
Sbjct: 3 IYVSNLSFDVQDEDLKDFFAPYGEVTSAKVITDRETGRSRGFGFVEMSDEAASKKAIAEL 62
Query: 96 NAKYLDGWVIFVDPAKSREARP 117
+ ++ I V AK +E RP
Sbjct: 63 DGATVENRTISVSVAKPKEDRP 84
>gi|37906123|gb|AAP44766.1| nucleolin [Bos taurus]
Length = 203
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 51/79 (64%), Gaps = 3/79 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKE+F + ++++TDR TG SKGFGFV + S E+A+ A+
Sbjct: 79 SKTLFVKGLSEDTTEETLKESFDG---SIRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 135
Query: 93 EGMNAKYLDGWVIFVDPAK 111
E M +DG + +D AK
Sbjct: 136 EAMEDGEIDGNKVTLDWAK 154
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 10/93 (10%)
Query: 41 LSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYL 100
LS T+E L+E F + + KV ++ G+SKG+ F+ + S E+A+ A N + +
Sbjct: 1 LSYSATEETLQEVFE---KATHIKVPQNQ-NGKSKGYAFIEFASFEDAKEALNSCNKREI 56
Query: 101 DGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
+G I + E + P P QPS+ F
Sbjct: 57 EGRAIRL------ELQGPRGSPNARSQPSKTLF 83
>gi|395325784|gb|EJF58201.1| hypothetical protein DICSQDRAFT_67439, partial [Dichomitus squalens
LYAD-421 SS1]
Length = 94
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 51/74 (68%)
Query: 40 GLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKY 99
LS TTD+ L+ AF+ +GQ++ S V+ DR TGRS+GFGFV+++S EA+ A +N +
Sbjct: 1 NLSWNTTDDNLRNAFSTYGQILDSIVMRDRDTGRSRGFGFVTFSSGSEAQSAIASLNEQE 60
Query: 100 LDGWVIFVDPAKSR 113
LDG I V+ A +R
Sbjct: 61 LDGRRIKVNLANAR 74
>gi|374721345|gb|AEZ68008.1| nucleolin [Chlorocebus aethiops]
Length = 712
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKE+F V ++++TDR TG SKGFGFV + S E+A+ A+
Sbjct: 573 SKTLFVKGLSEDTTEETLKESF---DGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 629
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
E M +DG + +D AK +
Sbjct: 630 EAMEDGEIDGNKVTLDWAKPK 650
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 28 NSTLT--SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSI 85
NST + S L +S LS T+E L+E F + + KV ++ G+SKG+ F+ + S
Sbjct: 480 NSTWSGESKTLVLSNLSYSATEETLQEVFE---KATFIKVPQNQ-NGKSKGYAFIEFASF 535
Query: 86 EEAERAREGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
E+A+ A N + ++G I + E + P P QPS+ F
Sbjct: 536 EDAKEALNSCNKREIEGRAIRL------ELQGPRGSPNARSQPSKTLF 577
>gi|332820240|ref|XP_526690.3| PREDICTED: polyadenylate-binding protein 4-like [Pan troglodytes]
Length = 428
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DE+LK+ F+ +G+ + KV+TD ++G+SKGFGFVS+ S E A++A E M
Sbjct: 250 IYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTD-SSGKSKGFGFVSFDSHEAAKKAVEEM 308
Query: 96 NAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSE 130
N + ++G +IFV A+ + R EQ E
Sbjct: 309 NGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRE 343
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L E F+ FG+++ SKV++D SKG+ FV + + A+RA E M
Sbjct: 158 VFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQG--SKGYAFVHFQNQSAADRAIEEM 215
Query: 96 NAKYLDGWVIFVDPAKSREARPP 118
N K L G +FV K+R+ R
Sbjct: 216 NGKLLKGCKVFVGRFKNRKDREA 238
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L++ L DEKL+ F+ FG + KV+ + G+SKGFG + ++S E+A +A
Sbjct: 352 KLYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQEE--GQSKGFGLICFSSPEDATKAMTE 409
Query: 95 MNAKYL 100
MN + L
Sbjct: 410 MNGRIL 415
>gi|193788267|dbj|BAG53161.1| unnamed protein product [Homo sapiens]
Length = 633
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 51/79 (64%), Gaps = 3/79 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKE+F V ++++TDR TG SKGFGFV + S E+A+ A+
Sbjct: 494 SKTLFVKGLSEDTTEETLKESF---DGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 550
Query: 93 EGMNAKYLDGWVIFVDPAK 111
E M +DG + +D AK
Sbjct: 551 EAMEDGEIDGNKVTLDWAK 569
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 28 NSTLT--SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSI 85
NST + S L +S LS T+E L+E F + + KV ++ G+SKG+ F+ + S
Sbjct: 401 NSTWSGESKTLVLSNLSYSATEETLQEVFE---KATFIKVPQNQ-NGKSKGYAFIEFASF 456
Query: 86 EEAERAREGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
E+A+ A N + ++G I + E + P P QPS+ F
Sbjct: 457 EDAKEALNSCNKREIEGRAIRL------ELQGPRGSPNAGSQPSKTLF 498
>gi|297265320|ref|XP_001116949.2| PREDICTED: nucleolin-like [Macaca mulatta]
gi|75075722|sp|Q4R4J7.3|NUCL_MACFA RecName: Full=Nucleolin
gi|67967725|dbj|BAE00345.1| unnamed protein product [Macaca fascicularis]
gi|67971272|dbj|BAE01978.1| unnamed protein product [Macaca fascicularis]
Length = 711
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKE+F V ++++TDR TG SKGFGFV + S E+A+ A+
Sbjct: 572 SKTLFVKGLSEDTTEETLKESF---DGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 628
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
E M +DG + +D AK +
Sbjct: 629 EAMEDGEIDGNKVTLDWAKPK 649
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 28 NSTLT--SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSI 85
NST + S L +S LS T+E L+E F + + KV ++ G+SKG+ F+ + S
Sbjct: 479 NSTWSGESKTLVLSNLSYSATEETLQEVFE---KATFIKVPQNQ-NGKSKGYAFIEFASF 534
Query: 86 EEAERAREGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
E+A+ A N + ++G I + E + P P QPS+ F
Sbjct: 535 EDAKEALNSCNKREIEGRAIRL------ELQGPRGSPNARSQPSKTLF 576
>gi|397485813|ref|XP_003814033.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Pan paniscus]
Length = 427
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DE+LK+ F+ +G+ + KV+TD ++G+SKGFGFVS+ S E A++A E M
Sbjct: 249 IYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTD-SSGKSKGFGFVSFDSHEAAKKAVEEM 307
Query: 96 NAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSE 130
N + ++G +IFV A+ + R EQ E
Sbjct: 308 NGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRE 342
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L E F+ FG+++ SKV++D SKG+ FV + + A+RA E M
Sbjct: 157 VFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQG--SKGYAFVHFQNQSAADRAIEEM 214
Query: 96 NAKYLDGWVIFVDPAKSREARPP 118
N K L G +FV K+R+ R
Sbjct: 215 NGKLLKGCKVFVGRFKNRKDREA 237
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L++ L DEKL+ F+ FG + KV+ + G+SKGFG + ++S E+A +A
Sbjct: 351 KLYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQEE--GQSKGFGLICFSSPEDATKAMTE 408
Query: 95 MNAKYL 100
MN + L
Sbjct: 409 MNGRIL 414
>gi|296205845|ref|XP_002749930.1| PREDICTED: uncharacterized protein LOC100395223 isoform 1
[Callithrix jacchus]
Length = 713
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKE+F V ++++TDR TG SKGFGFV + S E+A+ A+
Sbjct: 574 SKTLFVKGLSEDTTEETLKESF---DGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 630
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
E M +DG + +D AK +
Sbjct: 631 EAMEDGEIDGNKVTLDWAKPK 651
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S L +S LS T+E L+E F + + KV ++ G+SKG+ F+ + S E+A+ A
Sbjct: 488 SKTLVLSNLSYSATEETLQEVFE---KATFIKVPQNQ-NGKSKGYAFIEFASFEDAKEAL 543
Query: 93 EGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
N + ++G I + E + P P QPS+ F
Sbjct: 544 NSCNKREIEGRAIRL------ELQGPRGSPNARSQPSKTLF 578
>gi|432102707|gb|ELK30188.1| Polyadenylate-binding protein 1 [Myotis davidii]
Length = 650
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
LFV L+ T DE L++ FAPFG + +KVI GR KGFGFVS++S EEA++A E M
Sbjct: 304 LFVKNLAESTDDEHLRKIFAPFGTVTSAKVIVK--GGRRKGFGFVSFSSREEAKKAVEEM 361
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
+ K L ++V A+ ++ R
Sbjct: 362 HGKMLSARPLYVSYARYKQER 382
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++V + TTDE L E F+ +G L K++TD +G+SKGFGF+ + +A+RA E +
Sbjct: 201 VYVKNFADGTTDEYLLEIFSQYGPLSSVKIMTDD-SGKSKGFGFIRFECHADAKRAIEEV 259
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K G I+V A+ ++ R
Sbjct: 260 NGKQFGGRKIYVSRAQKKKER 280
Score = 42.0 bits (97), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+FV+ L +++L + FA FG ++ KV++D KG GFV + + E A++A + M
Sbjct: 109 VFVNHLDASIDNKELYDLFAGFGTILSCKVVSDE--NGPKGHGFVHFETREAADKAIKEM 166
Query: 96 NAKYLDGWVIFV 107
N + +FV
Sbjct: 167 NGSLVKERKVFV 178
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S L+V L T+ L E F+ G ++ +V D + RS G+G+V++ E+A A
Sbjct: 18 SASLYVGDLHPEVTEAMLYEKFSAAGPILSVRVCRDALSSRSLGYGYVNFHRPEDAGHAL 77
Query: 93 EGMNAKYLDG 102
MN L G
Sbjct: 78 NTMNFDVLHG 87
>gi|119591368|gb|EAW70962.1| nucleolin, isoform CRA_c [Homo sapiens]
gi|193785526|dbj|BAG50892.1| unnamed protein product [Homo sapiens]
Length = 536
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 51/79 (64%), Gaps = 3/79 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKE+F V ++++TDR TG SKGFGFV + S E+A+ A+
Sbjct: 397 SKTLFVKGLSEDTTEETLKESFDG---SVRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 453
Query: 93 EGMNAKYLDGWVIFVDPAK 111
E M +DG + +D AK
Sbjct: 454 EAMEDGEIDGNKVTLDWAK 472
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 28 NSTLT--SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSI 85
NST + S L +S LS T+E L+E F + + KV ++ G+SKG+ F+ + S
Sbjct: 304 NSTWSGESKTLVLSNLSYSATEETLQEVFE---KATFIKVPQNQ-NGKSKGYAFIEFASF 359
Query: 86 EEAERAREGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
E+A+ A N + ++G I + E + P P QPS+ F
Sbjct: 360 EDAKEALNSCNKREIEGRAIRL------ELQGPRGSPNARSQPSKTLF 401
>gi|26341628|dbj|BAC34476.1| unnamed protein product [Mus musculus]
Length = 550
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 51/79 (64%), Gaps = 3/79 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKE+F V ++++TDR TG SKGFGFV + S E+A+ A+
Sbjct: 411 SKTLFVKGLSEDTTEETLKESFEG---SVRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 467
Query: 93 EGMNAKYLDGWVIFVDPAK 111
E M +DG + +D AK
Sbjct: 468 EAMEDGEIDGNKVTLDWAK 486
>gi|291084655|ref|NP_001108206.2| polyadenylate-binding protein 4-like [Homo sapiens]
Length = 428
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Query: 47 DEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIF 106
DE+LK+ F+ +G+ + KV+TD ++G+SKGFGFVS+ S E A++A E MN + ++G +IF
Sbjct: 261 DERLKDVFSKYGKTLSVKVMTD-SSGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIF 319
Query: 107 VDPAKSREARPPPPPPYPEQQPSE 130
V A+ + R EQ E
Sbjct: 320 VGRAQKKVERQAELKQMFEQLKRE 343
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L E F+ FG+++ SKV++D SKG+ FV + + A+RA E M
Sbjct: 158 VFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQG--SKGYAFVHFQNQSAADRAIEEM 215
Query: 96 NAKYLDGWVIFVDPAKSREARPP 118
N K L G +FV K+R+ R
Sbjct: 216 NGKLLKGCKVFVGRFKNRKDREA 238
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L++ L DEKL+ F+ FG + KV+ + G+SKGFG + ++S E+A +A
Sbjct: 352 KLYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQEE--GQSKGFGLICFSSPEDATKAMTE 409
Query: 95 MNAKYL 100
MN + L
Sbjct: 410 MNGRIL 415
>gi|268533576|ref|XP_002631916.1| Hypothetical protein CBG07904 [Caenorhabditis briggsae]
Length = 411
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 52/92 (56%)
Query: 9 RALSSGSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITD 68
R + ++ SQ G R T +FV LS KL+EAF FG + +K+I D
Sbjct: 103 REMRVNWAVDASQPGDSRKQETSRHFHVFVGDLSSEVDSTKLREAFLAFGDVSEAKIIRD 162
Query: 69 RATGRSKGFGFVSYTSIEEAERAREGMNAKYL 100
AT ++KG+GFVSY E+AERA E MN ++L
Sbjct: 163 TATNKAKGYGFVSYPRREDAERAIEQMNGQWL 194
>gi|357111298|ref|XP_003557451.1| PREDICTED: uncharacterized protein LOC100823909 [Brachypodium
distachyon]
Length = 258
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 54/79 (68%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R+FV GLS TT+ L+ AF+ FG+++ ++V+T+R TGRS+GFGFV+++ A+ A
Sbjct: 8 RIFVGGLSWDTTERTLERAFSDFGKVIETQVVTERDTGRSRGFGFVTFSEPRAADAAIRE 67
Query: 95 MNAKYLDGWVIFVDPAKSR 113
M+ LDG I V+ A+ R
Sbjct: 68 MHNGELDGRTISVNKAQPR 86
>gi|15231557|ref|NP_189273.1| RNA recognition motif and CCHC-type zinc finger domain-containing
protein [Arabidopsis thaliana]
gi|15983477|gb|AAL11606.1|AF424613_1 AT3g26420/F20C19_14 [Arabidopsis thaliana]
gi|9294301|dbj|BAB02203.1| unnamed protein product [Arabidopsis thaliana]
gi|15451066|gb|AAK96804.1| Unknown protein [Arabidopsis thaliana]
gi|18377412|gb|AAL66872.1| unknown protein [Arabidopsis thaliana]
gi|62320797|dbj|BAD93728.1| RNA-binding protein [Arabidopsis thaliana]
gi|110742443|dbj|BAE99140.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|332643635|gb|AEE77156.1| RNA recognition motif and CCHC-type zinc finger domain-containing
protein [Arabidopsis thaliana]
Length = 245
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 49/77 (63%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R F+ GL+ T+D L++AF +G LV +KV+ D+ +GRS+GFGF+++ + + A
Sbjct: 8 RCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKAMDEAIAA 67
Query: 95 MNAKYLDGWVIFVDPAK 111
MN LDG I VD A+
Sbjct: 68 MNGMDLDGRTITVDKAQ 84
>gi|335293857|ref|XP_003357073.1| PREDICTED: polyadenylate-binding protein 4-like [Sus scrofa]
Length = 370
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DE+LKE F+ +G+ + KV+ D ++G+SKGFGFVS+ S E A++A E M
Sbjct: 192 VYIKNFGDDMDDERLKEVFSKYGKTLSVKVMRD-SSGKSKGFGFVSFDSHEAAKKAVEEM 250
Query: 96 NAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSE 130
N K ++G ++FV A+ + R EQ E
Sbjct: 251 NGKDINGQLLFVGRAQKKAERQAELKQMFEQLKRE 285
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L++ L DEKL+ F+ FG + KV+ + GRSKGFG + ++S EEA +A
Sbjct: 294 KLYIKNLDETIDDEKLRREFSSFGSISRVKVMQE--EGRSKGFGLICFSSPEEATKAMTE 351
Query: 95 MNAKYL 100
MN + L
Sbjct: 352 MNGRIL 357
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L E F+ FG+++ SKV++D S+G+ FV + + A+RA E M
Sbjct: 100 VFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQG--SRGYAFVHFQNQIAADRAIEEM 157
Query: 96 NAKYLDGWVIFVDPAKSREARPPP 119
N L +FV K+R+ R
Sbjct: 158 NGALLKDCRLFVGRFKNRKDREAE 181
>gi|356526775|ref|XP_003531992.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Glycine max]
Length = 146
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Query: 10 ALSSGSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDR 69
AL +GS+ L L Y +S +LFV+GLS T + L++AF G+++ KVI D
Sbjct: 35 ALVNGSA-LHFHLPRFLYVRHHSSIKLFVTGLSYDTNEPVLRDAFGQHGEIIEVKVICDH 93
Query: 70 ATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREARPPP 119
TG+S+G+GFV + S A + MN + LDG I V A E P
Sbjct: 94 VTGKSRGYGFVRFLSETIAAATHKEMNGQILDGRCIRVSYAHKGERLSLP 143
>gi|406907930|gb|EKD48603.1| RNA-binding protein [uncultured bacterium]
Length = 100
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 49/85 (57%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++V L T++ L+E F FG + +KV+ D+ +GRSKGF FV ++ EE E A E +
Sbjct: 3 IYVGNLPYSITEDSLRELFEQFGDVSSTKVVVDQISGRSKGFAFVDMSNDEEGEAAIEKL 62
Query: 96 NAKYLDGWVIFVDPAKSREARPPPP 120
N LDG I V+ AK R R P
Sbjct: 63 NGHELDGRTIVVNKAKPRAPRDSKP 87
>gi|197632397|gb|ACH70922.1| elongation factor-1 delta-1 [Salmo salar]
Length = 203
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 49/76 (64%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GL T + L+EAF+ +G + V+ DR T RS+GFGFV++ + E+A+ A
Sbjct: 6 KLFVGGLCFDTDETSLEEAFSKYGNIAKVDVVRDRETQRSRGFGFVTFENPEDAKDAMAA 65
Query: 95 MNAKYLDGWVIFVDPA 110
MN K +DG +I VD A
Sbjct: 66 MNGKSVDGRMIRVDEA 81
>gi|410956870|ref|XP_003985059.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Felis catus]
Length = 486
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DE+LKE F+ +G+ + KV+TD ++G+SKGFGFVS+ S E A++A E M
Sbjct: 291 VYIKNFGDDMDDERLKEVFSKYGKTLSVKVMTD-SSGKSKGFGFVSFDSHEAAKKAVEEM 349
Query: 96 NAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSE 130
N K ++G ++FV A+ + R EQ E
Sbjct: 350 NGKDINGQLLFVGRAQKKSERQAELKQVFEQLKQE 384
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L++ L DEKL F+ FG + K++ R GRSKGFG + ++S EEA +A
Sbjct: 393 KLYIKNLDDTIDDEKLWREFSSFGSISRVKIM--REEGRSKGFGLICFSSPEEATKAMAE 450
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSE 130
MN + L +++ A+ R QQP E
Sbjct: 451 MNGRILGSKPLYIALAQKPXERNAYHGRPCLQQPWE 486
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L R ++ L E F+ FG+++ SKV++D S+G+ FV + + A+RA E M
Sbjct: 199 VFIKNLDRSIDNKTLYEHFSAFGKILSSKVMSDDQG--SRGYAFVHFQNQIAADRAIEEM 256
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N L +FV K+R+ R
Sbjct: 257 NGALLKDCRLFVGRFKNRKDR 277
>gi|356519124|ref|XP_003528224.1| PREDICTED: uncharacterized protein LOC100801928 [Glycine max]
Length = 656
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 56/90 (62%)
Query: 18 LKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGF 77
L S + R S + RLF+ G+S + L E + +GQ+V +++I DR TGR +GF
Sbjct: 26 LSSVFQATRCMSNAPNSRLFIGGVSYSIDAQSLGEICSQYGQVVDARIIMDRETGRHRGF 85
Query: 78 GFVSYTSIEEAERAREGMNAKYLDGWVIFV 107
GF++Y++++EA RA + ++ + LDG + V
Sbjct: 86 GFITYSNVDEASRALQALDGQDLDGRRVEV 115
>gi|402078039|gb|EJT73388.1| nuclear localization sequence binding protein [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 499
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 46/73 (63%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
LFV LS D+ LKE F G++V ++VITDR TGRSKGFG+V + S +AE+A
Sbjct: 255 LFVGSLSWNVDDDMLKEEFKFCGEVVSARVITDRETGRSKGFGYVDFASPADAEKAHAEK 314
Query: 96 NAKYLDGWVIFVD 108
++DG I VD
Sbjct: 315 QGAFIDGRQIKVD 327
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
Query: 31 LTSPR---LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEE 87
+TSP LFV L ++ + E F ++ ++ TD+ +GR KGFG+VS+ S+E+
Sbjct: 348 VTSPESDTLFVGNLPFDADEDVVSEFFGSVAEIKSLRLPTDQESGRRKGFGYVSFNSVED 407
Query: 88 AERAREGMNAKYLDGWVIFVDPAKSREARPPPP 120
A+ A ++ + ++G P + + P PP
Sbjct: 408 AKSAFTQLSGQSINGR-----PCRLDYSTPKPP 435
>gi|301764847|ref|XP_002917846.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Ailuropoda melanoleuca]
Length = 492
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++V DE+LKE F+ +G+ + KV+TD + G+SKGFGFVS+ S E A++A E M
Sbjct: 291 VYVKNFGDDMDDERLKEVFSKYGKTLSVKVMTD-SGGKSKGFGFVSFDSHEAAKKAVEEM 349
Query: 96 NAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSE 130
N K ++G ++FV A+ + R EQ E
Sbjct: 350 NGKDVNGQLLFVGRAQKKSERQAELKQMFEQLKQE 384
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L++ L DEKL F+ FG + K++ R GRSKGFG + ++S EEA +A
Sbjct: 393 KLYIKNLDDTIDDEKLWREFSSFGSISRVKIM--REEGRSKGFGLICFSSPEEATKAMAE 450
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPPPYPEQ 126
MN + L +++ A+ RP + Q
Sbjct: 451 MNGRILGSKPLYIALAQ----RPXERKNFLHQ 478
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L E F+ FG+++ SKV++D S+G+ FV + + A+RA E M
Sbjct: 199 VFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQG--SRGYAFVHFQNQNAADRAIEEM 256
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N L +FV K+R+ R
Sbjct: 257 NGALLKDCRLFVGRFKNRKDR 277
>gi|297674344|ref|XP_002815190.1| PREDICTED: polyadenylate-binding protein 4-like [Pongo abelii]
Length = 428
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DE+LK+ F+ +G+ + KV+TD ++G+SKGFGFVS+ S E A++A E M
Sbjct: 250 IYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTD-SSGKSKGFGFVSFDSHEAAKKAVEEM 308
Query: 96 NAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSE 130
N + ++G +IFV A+ + R EQ E
Sbjct: 309 NGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRE 343
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L E F+ FG+++ SKV++D SKG+ FV + + A+RA E M
Sbjct: 158 VFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQG--SKGYAFVHFQNQSAADRAIEEM 215
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K L G +FV K+R+ R
Sbjct: 216 NGKLLKGCKVFVGRFKNRKDR 236
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L++ L DEKL+ F+ FG + KV+ + G+SKGFG + ++S E+A +A
Sbjct: 352 KLYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQEE--GQSKGFGLICFSSPEDATKAMTE 409
Query: 95 MNAKYL 100
MN + L
Sbjct: 410 MNGRIL 415
>gi|357144334|ref|XP_003573255.1| PREDICTED: uncharacterized protein LOC100824407 [Brachypodium
distachyon]
Length = 226
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV LS TTD LK+AF FG++ +KV+ D+ +GRS+GFGFV++ + E A E
Sbjct: 8 RCFVGSLSWSTTDVDLKDAFGKFGRVTETKVVLDKYSGRSRGFGFVTFDDKKAMEEAVEA 67
Query: 95 MNAKYLDGWVIFVDPAK 111
MN LDG I V+ A+
Sbjct: 68 MNGIDLDGRNITVERAQ 84
>gi|440913256|gb|ELR62731.1| Nucleolin, partial [Bos grunniens mutus]
Length = 714
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKE+F + ++++TDR TG SKGFGFV + S E+A+ A+
Sbjct: 575 SKTLFVKGLSEDTTEETLKESF---DGSIRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 631
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
E M +DG + +D AK +
Sbjct: 632 EAMEDGEIDGNKVTLDWAKPK 652
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 28 NSTLT--SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSI 85
NST + S L +S LS T+E L+E F + + KV ++ G+SKG+ F+ + S
Sbjct: 482 NSTWSGESKTLVLSNLSYSATEETLQEVFE---KATHIKVPQNQ-NGKSKGYAFIEFASF 537
Query: 86 EEAERAREGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
E+A+ A N + ++G I + E + P P QPS+ F
Sbjct: 538 EDAKEALNSCNKREIEGRAIRL------ELQGPRGSPNARSQPSKTLF 579
>gi|15228191|ref|NP_188259.1| poly(A) binding protein 6 [Arabidopsis thaliana]
gi|2062166|gb|AAB63640.1| poly(A)-binding protein isolog [Arabidopsis thaliana]
gi|9279720|dbj|BAB01277.1| poly(A) binding protein-like [Arabidopsis thaliana]
gi|332642284|gb|AEE75805.1| poly(A) binding protein 6 [Arabidopsis thaliana]
Length = 537
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V LS + +L+E F +GQ+V +KV+ GRSKGFGFV +++ EE+++A+ +
Sbjct: 306 LYVKNLSESMNETRLREIFGCYGQIVSAKVMCHE-NGRSKGFGFVCFSNCEESKQAKRYL 364
Query: 96 NAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSE 130
N +DG I V A+ +E R Y + QP +
Sbjct: 365 NGFLVDGKPIVVRVAERKEDRIKRLQQYFQAQPRQ 399
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S ++V L TD+ L F+ +G V S V+ GRS+GFGFV++ + E A++A
Sbjct: 201 STNVYVKNLIETVTDDCLHTLFSQYGT-VSSVVVMRDGMGRSRGFGFVNFCNPENAKKAM 259
Query: 93 EGMNAKYLDGWVIFVDPAKSREAR 116
E + L +FV A ++ R
Sbjct: 260 ESLCGLQLGSKKLFVGKALKKDER 283
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V L T L+ F PFG ++ KV+ + G+SKGFGFV + + + A AR +
Sbjct: 114 LYVKNLDSSITSSCLERMFCPFGSILSCKVVEE--NGQSKGFGFVQFDTEQSAVSARSAL 171
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
+ + G +FV +++ R
Sbjct: 172 HGSMVYGKKLFVAKFINKDER 192
>gi|297827229|ref|XP_002881497.1| hypothetical protein ARALYDRAFT_482714 [Arabidopsis lyrata subsp.
lyrata]
gi|297327336|gb|EFH57756.1| hypothetical protein ARALYDRAFT_482714 [Arabidopsis lyrata subsp.
lyrata]
Length = 289
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R++V LS D L+ FA G++V ++VI DR +GRSKGFGFV+Y S +E + A
Sbjct: 205 RVYVGNLSWGVDDMALESLFAEQGKVVEARVIYDRDSGRSKGFGFVTYNSSQEVQNAINS 264
Query: 95 MNAKYLDGWVIFVDPAKSREARPP 118
+N LDG I V A EARPP
Sbjct: 265 LNGADLDGRQIRVSEA---EARPP 285
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV L +L + F G + +VI D+ TGRS+GFGFV+ +S+ E E A
Sbjct: 92 KLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSSVSEVEAAANQ 151
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPP 120
N LDG + V+ A PPPP
Sbjct: 152 FNGYELDGRPLRVN------AGPPPP 171
>gi|164427760|ref|XP_965121.2| hypothetical protein NCU02736 [Neurospora crassa OR74A]
gi|157071873|gb|EAA35885.2| predicted protein [Neurospora crassa OR74A]
Length = 200
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 47/81 (58%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T D L+ F FG + + V+ DR TGRS+GFGFV Y + +AE A
Sbjct: 3 KLFVGGLSWNTDDNMLRAKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYGNDADAENAIAN 62
Query: 95 MNAKYLDGWVIFVDPAKSREA 115
M+ + DG + VD A R A
Sbjct: 63 MDGQEFDGRRVRVDKASDRAA 83
>gi|423302507|ref|ZP_17280529.1| hypothetical protein HMPREF1057_03670 [Bacteroides finegoldii
CL09T03C10]
gi|408470383|gb|EKJ88917.1| hypothetical protein HMPREF1057_03670 [Bacteroides finegoldii
CL09T03C10]
Length = 99
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 50/82 (60%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++++GLS T D L FA FG++ +KVI DR TG+S+GF FV TS EE ++A + +
Sbjct: 3 IYIAGLSYRTNDADLTNLFAEFGEVSSAKVIMDRETGKSRGFAFVEMTSDEEGQKAIDEL 62
Query: 96 NAKYLDGWVIFVDPAKSREARP 117
N D VI V A+ R +P
Sbjct: 63 NGVEYDQKVISVSVARPRAEKP 84
>gi|225680987|gb|EEH19271.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
gi|226292701|gb|EEH48121.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 148
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 49/80 (61%)
Query: 34 PRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERARE 93
+LFV GL+ TTD+ L++ F +G + + V+ DR T RS+GFGFV ++ EA+ A
Sbjct: 2 SKLFVGGLAWHTTDQTLRQGFEKYGTIEEAIVVKDRDTNRSRGFGFVRFSRDVEADAAMN 61
Query: 94 GMNAKYLDGWVIFVDPAKSR 113
M+ + DG VI VD A R
Sbjct: 62 AMSNQEFDGRVIRVDKASDR 81
>gi|426221705|ref|XP_004023200.1| PREDICTED: LOW QUALITY PROTEIN: nucleolin [Ovis aries]
Length = 724
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKE+F + ++++TDR TG SKGFGFV + S E+A+ A+
Sbjct: 585 SKTLFVKGLSEDTTEETLKESF---DGSIRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 641
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
E M +DG + +D AK +
Sbjct: 642 EAMEDGEIDGNKVTLDWAKPK 662
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S L +S LS T+E L+E F + + KV ++ G+SKG+ F+ + S E+A+ A
Sbjct: 499 SKTLVLSNLSYSATEETLQEVFE---KATHIKVPQNQ-NGKSKGYAFIEFASFEDAKEAL 554
Query: 93 EGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
N + ++G I + E + P P QPS+ F
Sbjct: 555 NSCNKREIEGRAIRL------ELQGPRGSPNARSQPSKTLF 589
>gi|331284195|ref|NP_001193589.1| nucleolin [Bos taurus]
gi|296490214|tpg|DAA32327.1| TPA: nucleolin [Bos taurus]
Length = 720
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKE+F + ++++TDR TG SKGFGFV + S E+A+ A+
Sbjct: 581 SKTLFVKGLSEDTTEETLKESF---DGSIRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 637
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
E M +DG + +D AK +
Sbjct: 638 EAMEDGEIDGNKVTLDWAKPK 658
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S L +S LS T+E L+E F + + KV ++ G+SKG+ F+ + S E+A+ A
Sbjct: 495 SKTLVLSNLSYSATEETLQEVFE---KATHIKVPQNQ-NGKSKGYAFIEFASFEDAKEAL 550
Query: 93 EGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
N + ++G I + E + P P QPS+ F
Sbjct: 551 NSCNKREIEGRAIRL------ELQGPRGSPNARSQPSKTLF 585
>gi|402086968|gb|EJT81866.1| hypothetical protein GGTG_01840 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 192
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 49/82 (59%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LF+ GL+ T + L++ F FG + + V+ DR TGRS+GFGFV YT+ ++A+RA
Sbjct: 3 KLFIGGLAWHTEEGTLRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYTNEDDAQRAISA 62
Query: 95 MNAKYLDGWVIFVDPAKSREAR 116
MN DG I VD A R
Sbjct: 63 MNNVEFDGRTIRVDKASDTGPR 84
>gi|423256816|ref|ZP_17237739.1| hypothetical protein HMPREF1055_00016 [Bacteroides fragilis
CL07T00C01]
gi|423266219|ref|ZP_17245222.1| hypothetical protein HMPREF1056_02909 [Bacteroides fragilis
CL07T12C05]
gi|387778292|gb|EIK40387.1| hypothetical protein HMPREF1055_00016 [Bacteroides fragilis
CL07T00C01]
gi|392701574|gb|EIY94732.1| hypothetical protein HMPREF1056_02909 [Bacteroides fragilis
CL07T12C05]
Length = 118
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 50/82 (60%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F++G+S ++ L E F FG+++ +K++ DR TGRSKGFGFV + EE A +
Sbjct: 3 IFIAGISYNLSNADLGELFEEFGEVISAKIVMDRETGRSKGFGFVEMPNDEEGNAAIAAL 62
Query: 96 NAKYLDGWVIFVDPAKSREARP 117
N K +DG + V A+ RE P
Sbjct: 63 NEKEIDGKTLAVSVARPREEGP 84
>gi|219130188|ref|XP_002185253.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403432|gb|EEC43385.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 605
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 48/81 (59%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V L TD+ L++ FA G + ++V+ D GRS+GFGFV Y++ EE+ RA M
Sbjct: 329 LYVKNLDDSVTDDMLRDEFAVMGTITSARVMKDAKDGRSRGFGFVCYSTPEESTRAVNEM 388
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K + IFV A+ RE R
Sbjct: 389 NGKLIANKPIFVALAQRREVR 409
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+FV L+ +++L + F+ FG ++ KV+TDR G S G+G+V Y + E A A E +
Sbjct: 129 IFVKNLNEAIDNKQLYDTFSLFGNILSCKVVTDREGGVSMGYGYVHYETAEAANAAIEKL 188
Query: 96 NAKYLDGWVIFVDPAKSREARP 117
+ +DG + V R RP
Sbjct: 189 DGMLIDGQEVQVGHFMRRNDRP 210
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 47 DEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAK----YLDG 102
D +L + FA FG+ V S ++ T ++ GFGF+++ E A A E +N K LDG
Sbjct: 229 DARLNQEFAQFGE-VLSATVSREDTNQTLGFGFINFAEHESAVAAVEALNGKEYTTTLDG 287
Query: 103 WVI 105
I
Sbjct: 288 EEI 290
>gi|410899897|ref|XP_003963433.1| PREDICTED: embryonic polyadenylate-binding protein-like [Takifugu
rubripes]
Length = 606
Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DEKLKE FA FG+ + +V+ D GRS+GFGFV++ E+A++A + M
Sbjct: 193 IYIKNFGEDYNDEKLKEVFAAFGRTLSVRVMKDE-RGRSRGFGFVNFAHHEDAQKAVDEM 251
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K L+G VI+V A+ R R
Sbjct: 252 NGKELNGKVIYVGRAQKRLER 272
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V L DE+L++ FAP+G + +KV+TD +S+GFGFV ++S EEA +A M
Sbjct: 296 LYVKNLDDSIDDERLRKEFAPYGTITSAKVMTDGP--QSRGFGFVCFSSPEEATKAVTEM 353
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N + + ++V A+ RE R
Sbjct: 354 NGRIVATKPLYVALAQRREER 374
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ + ++ L + F+ FG ++ KV+ D SKG+GFV + + E A RA E M
Sbjct: 101 IFIKNMDESIDNKALYDTFSAFGNILSCKVVCDERG--SKGYGFVHFETEEAANRAIETM 158
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N L+ +FV KSR+ R
Sbjct: 159 NGMLLNDRKVFVGHFKSRKER 179
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V L T+ L + F+P G ++ +V D T RS G+ ++++ +AE A + M
Sbjct: 13 LYVGDLHPDVTEAMLYQKFSPAGPIMSIRVCRDIITRRSLGYAYINFQQPADAECALDTM 72
Query: 96 NAKYLDG 102
N + G
Sbjct: 73 NYDVIKG 79
>gi|444510365|gb|ELV09582.1| Nucleolin [Tupaia chinensis]
Length = 679
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 56/89 (62%), Gaps = 6/89 (6%)
Query: 28 NSTLT---SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTS 84
NST + S LFV GLS TT+E LKE+F V ++++TDR TG SKGFGFV + S
Sbjct: 396 NSTWSAEPSKTLFVKGLSEDTTEETLKESF---DGSVRARIVTDRETGSSKGFGFVDFNS 452
Query: 85 IEEAERAREGMNAKYLDGWVIFVDPAKSR 113
E+A+ A+E M +DG + +D AK +
Sbjct: 453 EEDAKAAKEAMEDGEIDGNKVTLDWAKPK 481
>gi|194211413|ref|XP_001495211.2| PREDICTED: nucleolin [Equus caballus]
Length = 705
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 51/79 (64%), Gaps = 3/79 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKE+F + ++++TDR TG SKGFGFV + S E+A+ A+
Sbjct: 566 SKTLFVKGLSEDTTEETLKESF---DGSIRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 622
Query: 93 EGMNAKYLDGWVIFVDPAK 111
E M +DG + +D AK
Sbjct: 623 EAMEDGEIDGNKVTLDWAK 641
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S L +S LS T+E L+E F + + KV ++ G+SKG+ F+ + S E+A+ A
Sbjct: 480 SKTLVLSNLSYNATEETLQEVFE---KATFIKVPQNQ-NGKSKGYAFIEFASFEDAKEAL 535
Query: 93 EGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
N + ++G I + E + P P QPS+ F
Sbjct: 536 NSCNKREIEGRAIRL------ELQGPRGSPNARSQPSKTLF 570
>gi|313219101|emb|CBY43303.1| unnamed protein product [Oikopleura dioica]
Length = 512
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V L DE L+EAF FG + +KVITD GRSKGFGFV ++S EEA +A M
Sbjct: 288 LYVKNLDDSIDDEGLREAFKQFGNITSAKVITD-LNGRSKGFGFVCFSSPEEATKAVTEM 346
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N + G ++V A+ +E R
Sbjct: 347 NGRIFGGKPLYVGLAQRKEDR 367
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L R ++ L + F+ FG ++ KV+ D SKGFGFV Y S E A+RA E +
Sbjct: 92 VFIKNLDRSIDNKALYDTFSSFGNILSCKVVCD--INGSKGFGFVHYESDESAQRAIEKV 149
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N ++ +FV KSR R
Sbjct: 150 NGMLMEDKKVFVARFKSRNDR 170
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 44/81 (54%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
LFV L + L E F FG++V KVI D TG SK GF+S+ ++AE A E M
Sbjct: 184 LFVKNLPDSWDTDALLENFEQFGEVVSHKVICDETTGLSKCHGFISFKEHDQAEAAVEIM 243
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
+ K ++G ++ A+ + R
Sbjct: 244 HEKEIEGKKLYCGRAQKKAER 264
>gi|393216848|gb|EJD02338.1| polyadenylate binding protein [Fomitiporia mediterranea MF3/22]
Length = 701
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
L++ L D+KL+ F PFG + K++ D G SKGFGFV Y+S EEA +A
Sbjct: 341 NLYIKNLEDDMDDDKLRAEFEPFGTITSCKIMRDE-KGTSKGFGFVCYSSPEEATKAVAE 399
Query: 95 MNAKYLDGWVIFVDPAKSREAR 116
MN K L ++V PA+ RE R
Sbjct: 400 MNNKMLGSKPLYVSPAQRREVR 421
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+F+ L + L + FA FG ++ KV TD GRS+GFGFV Y + E A+ A +
Sbjct: 145 NIFIKNLDEQIDHKALHDTFAAFGNVLSCKVATDE-NGRSRGFGFVHYDTAEAADTAIKA 203
Query: 95 MNAKYLDGWVIFVDPAKSREAR 116
+N L+ +FV S++ R
Sbjct: 204 VNGMLLNDKKVFVGHYISKKER 225
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
L+V L TD++ + FA FG+ V S V+ G+SKGFGFV++ E A+ A +
Sbjct: 238 NLYVKNLDTEVTDDEFNDMFAKFGE-VTSAVVQKDEEGKSKGFGFVNFKDHESAQAAVDA 296
Query: 95 MNAKYLDGWVIFVDPAKSREAR 116
++ L+G +FV A+ + R
Sbjct: 297 LHDTELNGKKLFVTRAQKKAER 318
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S L+V L T+ L E F G + +V D T RS G+ +V+Y + + ERA
Sbjct: 55 SASLYVGELDSTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERAL 114
Query: 93 EGMN 96
E +N
Sbjct: 115 EQLN 118
>gi|432095458|gb|ELK26654.1| Polyadenylate-binding protein 4 [Myotis davidii]
Length = 657
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DE LKE F+ FG+ + KV+ D TG+SKGFGFVSY E+A +A E M
Sbjct: 189 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PTGKSKGFGFVSYEKHEDANKAVEEM 247
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K + G VIFV A+ + R
Sbjct: 248 NGKEISGKVIFVGRAQKKVER 268
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L++ L DEKL++ F+PFG + ++V+ + GRSKGFGFV ++S EEA +A M
Sbjct: 292 LYIKNLDDTIDDEKLRKEFSPFGSITRAEVMLE--DGRSKGFGFVCFSSPEEATKAVTEM 349
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N + + ++V A+ +E R
Sbjct: 350 NGRIVGSKPLYVALAQRKEER 370
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L + F+ FG ++ KV+ D SKG+ FV + + E A++A E M
Sbjct: 97 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKM 154
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N L+ +FV KSR+ R
Sbjct: 155 NGMLLNDRKVFVGRFKSRKER 175
>gi|346321757|gb|EGX91356.1| nucleolin protein Nsr1, putative [Cordyceps militaris CM01]
Length = 438
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 49/84 (58%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
LF LS D L EAF F LV+++V+TD+ TGRS+GFG+V + E A +A E M
Sbjct: 183 LFAGSLSWGVDDNALYEAFKSFSGLVHARVVTDKNTGRSRGFGYVDFADSESATKAYEAM 242
Query: 96 NAKYLDGWVIFVDPAKSREARPPP 119
+ +DG + +D A ++ A P
Sbjct: 243 QGQEVDGRALNLDYANAKPAESKP 266
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 26 RYNSTLT--SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYT 83
R+ TL+ S LFV L T + ++E F ++ ++ TD +G KGFG+V++
Sbjct: 276 RHGDTLSAESETLFVGNLPFDTEQDAVREFFGEVAEVASIRLPTDPESGNLKGFGYVTFN 335
Query: 84 SIEEAERAREGMN 96
SI++A+ A E N
Sbjct: 336 SIDDAKTALEAKN 348
>gi|262409231|ref|ZP_06085775.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294645795|ref|ZP_06723479.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a]
gi|294809469|ref|ZP_06768173.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b]
gi|298482319|ref|ZP_07000506.1| RNA-binding protein [Bacteroides sp. D22]
gi|336406428|ref|ZP_08587083.1| hypothetical protein HMPREF0127_04396 [Bacteroides sp. 1_1_30]
gi|345509855|ref|ZP_08789442.1| hypothetical protein BSAG_03520 [Bacteroides sp. D1]
gi|423216418|ref|ZP_17202942.1| hypothetical protein HMPREF1074_04474 [Bacteroides xylanisolvens
CL03T12C04]
gi|229446016|gb|EEO51807.1| hypothetical protein BSAG_03520 [Bacteroides sp. D1]
gi|262352978|gb|EEZ02074.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292638874|gb|EFF57208.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a]
gi|294443341|gb|EFG12104.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b]
gi|295085347|emb|CBK66870.1| RNA-binding proteins (RRM domain) [Bacteroides xylanisolvens XB1A]
gi|298271606|gb|EFI13180.1| RNA-binding protein [Bacteroides sp. D22]
gi|335934632|gb|EGM96617.1| hypothetical protein HMPREF0127_04396 [Bacteroides sp. 1_1_30]
gi|392690789|gb|EIY84043.1| hypothetical protein HMPREF1074_04474 [Bacteroides xylanisolvens
CL03T12C04]
Length = 99
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 50/82 (60%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++SGLS TTD L FA FG++ +KVI DR TGRS+GF FV T+ E ++A + +
Sbjct: 3 IYISGLSYGTTDADLTNLFAEFGEVSSAKVIFDRETGRSRGFAFVEMTNDGEGQKAIDEL 62
Query: 96 NAKYLDGWVIFVDPAKSREARP 117
N D VI V A+ R RP
Sbjct: 63 NGVEYDQKVISVSVARPRTERP 84
>gi|406602185|emb|CCH46236.1| Polyadenylate-binding protein, cytoplasmic and nuclear
[Wickerhamomyces ciferrii]
Length = 652
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 18 LKSQLGSIRYNSTLTSP--RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSK 75
LK Q + R S LFV L DEKLKE F FG + KV+ D +G+SK
Sbjct: 326 LKKQYEAARIEKLTKSQGVNLFVKNLDDSIDDEKLKEEFQSFGTISSVKVMIDE-SGKSK 384
Query: 76 GFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREAR 116
GFGFVS++S EEA RA MN L G ++V A+ ++ R
Sbjct: 385 GFGFVSFSSPEEASRAISEMNQHMLAGKPLYVALAQRKDVR 425
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+F+ L ++ L + F+ FG+++ KV TD G+SKGFGFV + S E A+ A E
Sbjct: 149 NVFIKNLHPAIDNKALHDTFSAFGRILSCKVATDN-FGQSKGFGFVHFESPEAAQAAIEN 207
Query: 95 MNAKYLDGWVIFVDPAKSREAR 116
+N L+ ++V P +R R
Sbjct: 208 VNGMLLNNNEVYVGPHVARRDR 229
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 32 TSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERA 91
T+ L+V L + L E F+P GQ+ +V D T RS G+ +V+Y ++++ E+A
Sbjct: 58 TTASLYVGELEPSINEALLFEIFSPIGQVSSIRVCRDALTKRSLGYAYVNYHNVKDGEKA 117
Query: 92 REGMNAKYLDGWVIFV-----DPAKSR 113
+ +N + G I + DPAK R
Sbjct: 118 IDELNYSVVKGQPIRIMWSQRDPAKRR 144
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
++V + ++E++KE F PFG V S + A G+S+GF FV+Y E A ++ E
Sbjct: 242 NVYVKNIDLEASEEEVKELFTPFG-TVTSFYLEKDAEGKSRGFAFVNYEEHEAAVKSIES 300
Query: 95 MNAKYLDGWVIFVDPAKSREAR 116
+N + G ++V A+ + R
Sbjct: 301 LNDQDYKGKKLYVGRAQKKSER 322
>gi|324507975|gb|ADY43373.1| Nucleolysin TIAR [Ascaris suum]
Length = 290
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 46/66 (69%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+F+ LS ++ LK+AFAPFG++ +KVI D T +SKG+GFVSY EEAERA E
Sbjct: 32 HVFIGDLSPEVDNKALKDAFAPFGEVSDAKVIRDSTTLKSKGYGFVSYPKREEAERAIEQ 91
Query: 95 MNAKYL 100
MN ++L
Sbjct: 92 MNGQWL 97
>gi|325290560|ref|YP_004266741.1| RNP-1 like RNA-binding protein [Syntrophobotulus glycolicus DSM
8271]
gi|324965961|gb|ADY56740.1| RNP-1 like RNA-binding protein [Syntrophobotulus glycolicus DSM
8271]
Length = 84
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S L+V L T+ E+L E FA FG ++ S++ITDR TGRS+GFGFV E+AER
Sbjct: 2 SKTLYVGNLPWATSSEELTEYFAEFGNVIGSRIITDRETGRSRGFGFVEVAD-EDAERLA 60
Query: 93 EGMNAKYLDGWVIFVDPAKSRE 114
E +N K +G + V+ A+ R+
Sbjct: 61 EELNGKDFNGRSLTVNEARPRQ 82
>gi|402587661|gb|EJW81596.1| nucleolysin TIAR [Wuchereria bancrofti]
Length = 440
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/65 (53%), Positives = 46/65 (70%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+FV LS ++ LK+AFAPFG++ +KVI D T +SKG+GFVSY EEAERA E M
Sbjct: 183 VFVGDLSPEVDNKALKDAFAPFGEVSDAKVIRDATTLKSKGYGFVSYPKREEAERAIEQM 242
Query: 96 NAKYL 100
N ++L
Sbjct: 243 NGQWL 247
>gi|444706907|gb|ELW48224.1| Polyadenylate-binding protein 4 [Tupaia chinensis]
Length = 692
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DE LKE F+ FG+ + KV+ D TG+SKGFGFVSY E+A +A E M
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PTGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K + G VIFV A+ + R
Sbjct: 252 NGKEISGKVIFVGRAQKKVER 272
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L++ L DEKL++ F+PFG + +KV+ + GRSKGFGFV ++S EEA +A M
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N + + ++V A+ +E R
Sbjct: 354 NGRIVGSKPLYVALAQRKEER 374
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L + F+ FG ++ KV+ D SKG+ FV + + E A++A E M
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKM 158
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N L+ +FV KSR+ R
Sbjct: 159 NGMLLNDRKVFVGRFKSRKER 179
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V L T+ L E F+P G ++ +V D T RS G+ +V++ +AERA + M
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 96 NAKYLDGWVIFV 107
N + G I +
Sbjct: 73 NFDVIKGKPIRI 84
>gi|299530322|ref|ZP_07043747.1| RNA-binding region RNP-1 [Comamonas testosteroni S44]
gi|298721693|gb|EFI62625.1| RNA-binding region RNP-1 [Comamonas testosteroni S44]
Length = 113
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S +++V L TD L+ FA FG + +KV+ DR TGRSKGF FV TS +E + A
Sbjct: 2 STKIYVGNLPYSVTDSNLRSNFAEFGTVTSAKVMMDRETGRSKGFAFVEMTSADECQAAI 61
Query: 93 EGMNAKYLDGWVIFVDPAKSRE 114
++ +DG I V+ AK RE
Sbjct: 62 SALHGMSVDGRSIVVNLAKPRE 83
>gi|261330753|emb|CBH13738.1| RNA-binding protein, putative [Trypanosoma brucei gambiense DAL972]
Length = 666
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
LF+SGL TD L E F+PFG + +KV+ D TGRS+G FV + + +A+RA E
Sbjct: 273 NLFISGLRHSVTDSGLHELFSPFGSIESAKVMLDIHTGRSRGIAFVKFVRLCDAQRAVEA 332
Query: 95 MNAKYLDGWVIFVDPAKSREA 115
+N G I V AK A
Sbjct: 333 LNGSIFCGETITVRVAKPNAA 353
>gi|72393389|ref|XP_847495.1| RNA-binding protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62359593|gb|AAX80026.1| RNA-binding protein, putative [Trypanosoma brucei]
gi|70803525|gb|AAZ13429.1| RNA-binding protein, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 666
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
LF+SGL TD L E F+PFG + +KV+ D TGRS+G FV + + +A+RA E
Sbjct: 273 NLFISGLRHSVTDSGLHELFSPFGSIESAKVMLDIHTGRSRGIAFVKFVRLCDAQRAVEA 332
Query: 95 MNAKYLDGWVIFVDPAKSREA 115
+N G I V AK A
Sbjct: 333 LNGSIFCGETITVRVAKPNAA 353
>gi|209154454|gb|ACI33459.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 206
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 49/76 (64%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GL T + L+EAF+ +G + V+ DR T RS+GFGFV++ + E+A+ A
Sbjct: 6 KLFVGGLCFDTDETSLEEAFSKYGNIAKVDVVRDRETQRSRGFGFVTFENPEDAKDAMAA 65
Query: 95 MNAKYLDGWVIFVDPA 110
MN K +DG +I VD A
Sbjct: 66 MNGKSVDGRMIRVDEA 81
>gi|376316225|emb|CCF99622.1| RNA recognition motif-containing protein [uncultured Flavobacteriia
bacterium]
Length = 83
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 51/81 (62%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+FV L+ D L+EAF FG + ++VITDR TGRS+GFGFV + EEA+ A +GM
Sbjct: 3 IFVGNLAWGVDDVVLREAFEAFGAVDSARVITDRETGRSRGFGFVEMPNQEEAQAALDGM 62
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
K L+G I + ++ RE R
Sbjct: 63 EGKDLEGRPIRCNESQPRERR 83
>gi|209737234|gb|ACI69486.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 146
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 49/76 (64%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GL T + L+EAF+ +G + V+ DR T RS+GFGFV++ + E+A+ A
Sbjct: 6 KLFVGGLCFDTDETSLEEAFSKYGNIAKVDVVRDRETQRSRGFGFVTFENPEDAKDAMAA 65
Query: 95 MNAKYLDGWVIFVDPA 110
MN K +DG +I VD A
Sbjct: 66 MNGKSVDGRMIRVDEA 81
>gi|297814870|ref|XP_002875318.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321156|gb|EFH51577.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 247
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 49/77 (63%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R F+ GL+ T+D L++AF +G LV +KV+ D+ +GRS+GFGF+++ + + A
Sbjct: 8 RCFIGGLAWSTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKAMDEAIAA 67
Query: 95 MNAKYLDGWVIFVDPAK 111
MN LDG I VD A+
Sbjct: 68 MNGMDLDGRTITVDKAQ 84
>gi|451853629|gb|EMD66922.1| hypothetical protein COCSADRAFT_168179 [Cochliobolus sativus
ND90Pr]
Length = 159
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 47/79 (59%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LF+ GL+ T D+ L+ F FG + + V+ DR TGRS+GFGFV Y EA+ A +
Sbjct: 3 KLFIGGLAWHTDDQTLRSKFEEFGPVEEAVVVKDRDTGRSRGFGFVRYAQETEADAAMQA 62
Query: 95 MNAKYLDGWVIFVDPAKSR 113
MN + DG I VD A R
Sbjct: 63 MNNEEFDGRRIRVDKASDR 81
>gi|449268380|gb|EMC79248.1| Nucleolin [Columba livia]
Length = 648
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 24 SIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYT 83
++R S LFV GLS TT+E L+E+F + ++++TDR TG SKGFGFV ++
Sbjct: 499 NVRGGFNQQSKTLFVRGLSEDTTEETLRESFEGS---ISARIVTDRDTGSSKGFGFVDFS 555
Query: 84 SIEEAERAREGMNAKYLDGWVIFVDPAK 111
S E+A+ A+E M +DG + +D AK
Sbjct: 556 SPEDAKAAKEAMEDGEIDGNKVILDFAK 583
>gi|124359615|gb|ABN06003.1| RNA-binding region RNP-1 (RNA recognition motif) [Medicago
truncatula]
Length = 83
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 47/66 (71%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFVS LS TT ++L+ F+PFG L + +ITD+ T R KGFGFVSY S EAE+AR+
Sbjct: 8 KLFVSRLSFYTTQQQLESLFSPFGVLTEATLITDQNTQRPKGFGFVSYKSEIEAEKARKA 67
Query: 95 MNAKYL 100
+N + +
Sbjct: 68 LNGRVI 73
>gi|300121030|emb|CBK21412.2| unnamed protein product [Blastocystis hominis]
Length = 296
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Query: 17 ILKSQLG----SIRYNSTLTSP-RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRAT 71
+ K LG ++R N ++FVS LS TTDE L++AF+ G++ + K++TDR T
Sbjct: 77 VAKGSLGKNSENVRQNRNYNDENKVFVSSLSWNTTDEMLRDAFSQCGKIEHYKILTDRQT 136
Query: 72 GRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFV 107
GRS+G G V +++ EE A MN LDG I V
Sbjct: 137 GRSRGMGIVKFSTREEMNNAISTMNGSTLDGRQIAV 172
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 60 LVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAK 111
LV +++ DR TGR +GFGFVS+++ + +A E N ++G I V+ AK
Sbjct: 29 LVTLQIVYDRNTGRPRGFGFVSFSTEDGLNKAME-QNGSLINGREIRVEVAK 79
>gi|448519634|ref|XP_003868121.1| poly(A)-binding protein [Candida orthopsilosis Co 90-125]
gi|380352460|emb|CCG22686.1| poly(A)-binding protein [Candida orthopsilosis]
Length = 638
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 18 LKSQLGSIRYN--STLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSK 75
LK Q +IR S LFV L EKL+E F PFG + +KV+ D A G+S+
Sbjct: 327 LKKQYEAIRLEKLSKYQGVNLFVKNLDDQIDSEKLEEEFKPFGTITSAKVMVDDA-GKSR 385
Query: 76 GFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREAR 116
GFGFV +++ EEA +A MN + ++G ++V A+ ++ R
Sbjct: 386 GFGFVCFSTPEEATKAITEMNQRMVNGKPLYVALAQRKDVR 426
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++V + ++++ ++ FAP+G++ + D+ G+SKGFGFV+Y + A A E +
Sbjct: 244 IYVKNIDLEFSEKEFEDLFAPYGKITSIYLEKDQ-DGKSKGFGFVNYEEHKSAVEAVEAL 302
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K ++G I+V A+ + R
Sbjct: 303 NDKEINGQKIYVGRAQKKRER 323
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 15 SSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRS 74
SS + +LG + NS L+V L+ + L E F+P GQ+ +V D + +S
Sbjct: 46 SSEEQGELGGVAENSA----SLYVGELNPSVNEATLFEIFSPIGQVSSIRVCRDAVSKKS 101
Query: 75 KGFGFVSYTSIEEAERAREGMN 96
G+ +V+Y E+ E+A + +N
Sbjct: 102 LGYAYVNYHKFEDGEKAIDELN 123
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L ++ L + F+ FG+++ KV TD G+SK FGFV Y + E AE A E +
Sbjct: 151 IFIKNLHPAIDNKALHDTFSAFGRILSCKVATDD-LGQSKCFGFVHYETAEAAEAAIENV 209
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N L+ ++V S++ R
Sbjct: 210 NGMLLNDREVYVGKHVSKKDR 230
>gi|284108895|ref|ZP_06386469.1| RNP-1 like RNA-binding protein [Candidatus Poribacteria sp. WGA-A3]
gi|283829840|gb|EFC34132.1| RNP-1 like RNA-binding protein [Candidatus Poribacteria sp. WGA-A3]
Length = 90
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
+ +++V LS TTD++L++ FA G + + V+TDR TGRS+GFGFV S EEA +A
Sbjct: 2 NQKIYVGNLSYSTTDQELQDLFAQHGTVQSANVVTDRYTGRSRGFGFVEMGSGEEAGQAI 61
Query: 93 EGMNAKYLDGWVIFVDPAKSRE 114
E +N G + V+ A+ +E
Sbjct: 62 EALNGTDFQGRSLVVNEARPKE 83
>gi|149921891|ref|ZP_01910335.1| RNA-binding protein [Plesiocystis pacifica SIR-1]
gi|149817244|gb|EDM76721.1| RNA-binding protein [Plesiocystis pacifica SIR-1]
Length = 189
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+FV GL +++LKE FA FG L ++VI DR TGRS+GFGFV+Y E A +A G+
Sbjct: 1 MFVGGLPWAMDNQRLKEVFAEFGALEDARVILDRETGRSRGFGFVTYVDEEGATKAL-GL 59
Query: 96 NAKYLDGWVIFVDPAKSRE 114
+ + +DG I VD A+ +E
Sbjct: 60 DGQEVDGRRIRVDRAQEKE 78
>gi|449432502|ref|XP_004134038.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
gi|449487476|ref|XP_004157645.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 276
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 53/85 (62%)
Query: 32 TSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERA 91
T +LFV LS T E L +AF +G +V ++VI D TG+S+G+GFVSY++ E E A
Sbjct: 191 TEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSEMETA 250
Query: 92 REGMNAKYLDGWVIFVDPAKSREAR 116
E +N L+G VI V A+ ++A
Sbjct: 251 LETINELELEGRVIRVSLAEGKQAH 275
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S +L+ L +L +G +V+ DR TG+S+GF FV+ +SIE+ +
Sbjct: 101 STKLYFGNLPYSVDSSQLAAIVQDYGIAELIEVLYDRNTGKSRGFAFVTMSSIEDCNKVI 160
Query: 93 EGMNAKYLDGWVIFVDPAKSREARPPPPPP-YPEQQ 127
E ++ G ++ V+ + +P P P YPE +
Sbjct: 161 ENLDGSAYMGRILRVNFSD----KPKPKEPLYPETE 192
>gi|327279530|ref|XP_003224509.1| PREDICTED: cold-inducible RNA-binding protein-like [Anolis
carolinensis]
Length = 148
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LF+ GLS T ++ L++ F+P+G + V+ DR T RS+GFGF++Y E+A+ A
Sbjct: 7 KLFIGGLSFDTNEQNLEQLFSPYGDIAEVVVVKDRETQRSRGFGFITYCRPEDAKDAMRA 66
Query: 95 MNAKYLDGWVIFVDPA 110
MN + +DG I VD A
Sbjct: 67 MNGESVDGRQIRVDQA 82
>gi|302791061|ref|XP_002977297.1| hypothetical protein SELMODRAFT_107195 [Selaginella moellendorffii]
gi|300154667|gb|EFJ21301.1| hypothetical protein SELMODRAFT_107195 [Selaginella moellendorffii]
Length = 180
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 48/77 (62%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R F+ GLS TTD L+ AF P+G ++ +KV+ DR T RS+GFGFV++ E E A
Sbjct: 6 RCFIGGLSWSTTDRSLETAFRPYGSIIEAKVVFDRETNRSRGFGFVTFEDEESMENAIRK 65
Query: 95 MNAKYLDGWVIFVDPAK 111
M+ + L+G I V A+
Sbjct: 66 MHNQELEGRSITVSKAE 82
>gi|406952399|gb|EKD82023.1| hypothetical protein ACD_39C01519G0004 [uncultured bacterium]
Length = 83
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 53/81 (65%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S ++FV L + KL+E FA FGQ+V +KVI DR +GRS+G+GFV +T A+ A
Sbjct: 2 SSKIFVGNLPFSVDNRKLEEEFAKFGQVVSAKVIMDRNSGRSRGYGFVEFTDPGSAQAAV 61
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
+GMN + ++G + V AK++
Sbjct: 62 DGMNDQPIEGRKLTVSLAKNQ 82
>gi|332231054|ref|XP_003264711.1| PREDICTED: polyadenylate-binding protein 4-like [Nomascus
leucogenys]
Length = 428
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DE+LK+ F+ +G+ + KV+TD ++G+SKGFGFVS+ S E A++A E M
Sbjct: 250 IYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTD-SSGKSKGFGFVSFDSHEAAKKAVEEM 308
Query: 96 NAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSE 130
N + ++G +IFV A+ + R EQ E
Sbjct: 309 NGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRE 343
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L E F+ FG+++ SKV++D SKG+ FV + + A+RA E M
Sbjct: 158 VFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQG--SKGYAFVHFQNQSAADRAIEEM 215
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K L G +FV K+R+ R
Sbjct: 216 NGKLLKGCKVFVGRFKNRKDR 236
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L++ L DEKL+ F+ FG + KV+ + G+SKGFG + ++S E+A +A
Sbjct: 352 KLYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQEE--GQSKGFGLICFSSPEDATKAMTE 409
Query: 95 MNAKYL 100
MN + L
Sbjct: 410 MNGRIL 415
>gi|313147463|ref|ZP_07809656.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|423277773|ref|ZP_17256687.1| hypothetical protein HMPREF1203_00904 [Bacteroides fragilis HMW
610]
gi|424663907|ref|ZP_18100944.1| hypothetical protein HMPREF1205_04293 [Bacteroides fragilis HMW
616]
gi|313136230|gb|EFR53590.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|404577597|gb|EKA82335.1| hypothetical protein HMPREF1205_04293 [Bacteroides fragilis HMW
616]
gi|404586970|gb|EKA91529.1| hypothetical protein HMPREF1203_00904 [Bacteroides fragilis HMW
610]
Length = 122
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 50/82 (60%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F++G+S ++ L E F FG+++ +K++ DR TGRSKGFGFV + EE A +
Sbjct: 3 IFIAGISYNLSNADLGELFEEFGEVISAKIVMDRETGRSKGFGFVEMPNDEEGNAAIAAL 62
Query: 96 NAKYLDGWVIFVDPAKSREARP 117
N K +DG + V A+ RE P
Sbjct: 63 NEKEIDGKTLSVSVARPREEGP 84
>gi|60729607|pir||JC7925 nucleolin - common carp
gi|27804344|gb|AAO22235.1| nucleolin [Cyprinus carpio]
Length = 693
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
LFV GLS TTD LKEAF V ++++TDR TG SKGFGFV + S + + A+E M
Sbjct: 542 LFVKGLSEDTTDHSLKEAFEG---AVNARIVTDRETGSSKGFGFVDFDSEGDCKAAKEAM 598
Query: 96 NAKYLDGWVIFVDPAK 111
+ +DG + +D AK
Sbjct: 599 DDGEIDGNRVTLDYAK 614
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 8/82 (9%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKV---ITDRATGRSKGFGFVSYTSIEEAERAR 92
LF+ L+ +++K A + F +SK I D G SK FG+V + S EE ++A
Sbjct: 274 LFLGNLNSNKDFDEIKSAISKF----FSKEGLEIQDVRLGGSKKFGYVDFASEEEMQKAL 329
Query: 93 EGMNAKYLDGWVIFVDPAKSRE 114
G+N K L G + +D AKS+E
Sbjct: 330 -GLNGKKLMGQPVKLDKAKSKE 350
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 11/73 (15%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRA---TGRSKGFGFVSYTSIEEAERAR 92
L V+ LS +E L Q V+ K ++ R GR KGF F+ + S+E+A+ A
Sbjct: 452 LVVNNLSFSANEESL--------QSVFEKAVSIRVPQNNGRPKGFAFLEFESVEDAKEAL 503
Query: 93 EGMNAKYLDGWVI 105
E N ++G I
Sbjct: 504 ENCNNTEIEGRSI 516
>gi|312129340|ref|YP_003996680.1| rnp-1 like RNA-binding protein [Leadbetterella byssophila DSM
17132]
gi|311905886|gb|ADQ16327.1| RNP-1 like RNA-binding protein [Leadbetterella byssophila DSM
17132]
Length = 87
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 46/83 (55%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+FV+ LS T D L+EAF FG++ +KVI D TGRSKGFGFV EA A +
Sbjct: 3 IFVAKLSFDTQDAGLREAFENFGEVKSAKVIMDNYTGRSKGFGFVEMNDHAEASNAIRSL 62
Query: 96 NAKYLDGWVIFVDPAKSREARPP 118
N LDG I V A+ R R
Sbjct: 63 NDSELDGRTIVVKQAEERGQRSS 85
>gi|335423511|ref|ZP_08552532.1| RNP-1 like RNA-binding protein [Salinisphaera shabanensis E1L3A]
gi|334891336|gb|EGM29584.1| RNP-1 like RNA-binding protein [Salinisphaera shabanensis E1L3A]
Length = 90
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 49/75 (65%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++V LS T D++L+ AF FG++ +KVI DR TGRS+GFGFV +A++A EGM
Sbjct: 3 IYVGNLSWNTNDDELRGAFEAFGEVSSAKVIMDRETGRSRGFGFVEMPDDNDAKQAIEGM 62
Query: 96 NAKYLDGWVIFVDPA 110
N K L G + V+ A
Sbjct: 63 NNKDLGGRTLRVNEA 77
>gi|327285428|ref|XP_003227435.1| PREDICTED: polyadenylate-binding protein 4-like [Anolis
carolinensis]
Length = 616
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DE+LKE F +G+ + KV+TD TG+SKGFGFVS+ EEA +A E M
Sbjct: 180 VYIKNFGDDMDDERLKELFGKYGKTLSVKVMTD-PTGKSKGFGFVSFEKHEEANKAVEEM 238
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K ++G ++FV A+ + R
Sbjct: 239 NGKDINGKMVFVGRAQKKVER 259
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L++ L DEKL++ F+PFG + +KV+ + GRSKGFGFV ++S EEA +A M
Sbjct: 283 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEE--GRSKGFGFVCFSSPEEATKAVTEM 340
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N + + ++V A+ +E R
Sbjct: 341 NGRIVGSKPLYVALAQRKEER 361
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L + F+ FG ++ KV+ D SKG+ FV + + + A+RA E M
Sbjct: 88 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQDAADRAIEKM 145
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N L+ +FV KSR+ R
Sbjct: 146 NGMLLNDRKVFVGRFKSRKER 166
>gi|326926008|ref|XP_003209198.1| PREDICTED: nucleolin-like [Meleagris gallopavo]
Length = 425
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 52/79 (65%), Gaps = 3/79 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E L+E+F + ++++TDR TG SKGFGFV ++S E+A+ A+
Sbjct: 292 SKTLFVRGLSEDTTEETLRESFEG---SISARIVTDRDTGSSKGFGFVDFSSPEDAKAAK 348
Query: 93 EGMNAKYLDGWVIFVDPAK 111
E M +DG + +D AK
Sbjct: 349 EAMEDGEIDGNKVILDFAK 367
>gi|241831489|ref|XP_002414860.1| apoptosis-promoting RNA-binding protein TIA-1/TIAR, putative
[Ixodes scapularis]
gi|215509072|gb|EEC18525.1| apoptosis-promoting RNA-binding protein TIA-1/TIAR, putative
[Ixodes scapularis]
Length = 686
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V L DE+L++ F PFG + +KV+TD A GRSKGFGFV ++S EEA +A M
Sbjct: 297 LYVKNLDDALDDERLRKEFGPFGNITSAKVMTD-ANGRSKGFGFVCFSSPEEATKAVTEM 355
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N + + ++V A+ +E R
Sbjct: 356 NGRIVVSKPLYVALAQRKEDR 376
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ D+KL F +G++ +KV+TD +G+++GFGFVS+ + AERA E +
Sbjct: 194 VYIKNFGDELDDDKLLVIFEKYGKITSAKVMTD-DSGKNRGFGFVSFEEPDSAERAVEEL 252
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K + G ++V A+ + R
Sbjct: 253 NGKDMGGRPLYVGRAQKKAER 273
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ + + F+ FG ++ +V TD SKG+GFV + + E A +A +
Sbjct: 101 VFIKNLDKTIDNKAMYDTFSAFGNILSCRVATDEEAA-SKGYGFVHFETEEAANKAISKV 159
Query: 96 NAKYLDGWVIFVD---PAKSRE 114
N L+ ++V P K RE
Sbjct: 160 NGMLLNNKKVYVGKFIPRKERE 181
>gi|302780311|ref|XP_002971930.1| hypothetical protein SELMODRAFT_172546 [Selaginella moellendorffii]
gi|300160229|gb|EFJ26847.1| hypothetical protein SELMODRAFT_172546 [Selaginella moellendorffii]
Length = 173
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 48/77 (62%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R F+ GLS TTD L+ AF P+G ++ +KV+ DR T RS+GFGFV++ E E A
Sbjct: 6 RCFIGGLSWSTTDRSLETAFRPYGSIIEAKVVFDRETNRSRGFGFVTFEDEESMENAIRK 65
Query: 95 MNAKYLDGWVIFVDPAK 111
M+ + L+G I V A+
Sbjct: 66 MHNQELEGRSITVSKAE 82
>gi|296422065|ref|XP_002840583.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636802|emb|CAZ84774.1| unnamed protein product [Tuber melanosporum]
Length = 559
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 46/73 (63%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
LFV LS + L+ F FG++ +V+TDR +GRSKGFG+V YT+ E A++A E M
Sbjct: 304 LFVGSLSWNVDEGWLRNEFEQFGEIAAVRVVTDRESGRSKGFGYVEYTTNEAAKKALEEM 363
Query: 96 NAKYLDGWVIFVD 108
K +DG I VD
Sbjct: 364 KGKDIDGRTINVD 376
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S +FV+ LS ++ ++ F FG +V ++ TD +G+ KGF ++ Y ++ A +A
Sbjct: 401 SETVFVANLSFEADEQIVQTEFEGFGNIVGLRIPTDPESGQPKGFCYIQYDRVDSARKAV 460
Query: 93 EGMNAKYLDGWVIFVD 108
E MN + G I D
Sbjct: 461 EEMNGALVAGRAIRTD 476
>gi|302815033|ref|XP_002989199.1| hypothetical protein SELMODRAFT_37572 [Selaginella moellendorffii]
gi|300143099|gb|EFJ09793.1| hypothetical protein SELMODRAFT_37572 [Selaginella moellendorffii]
Length = 166
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 50/76 (65%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GLS T D+ L+ +F FG+++ +KVI DR +GRS+GFGFV++ + A +
Sbjct: 4 RCFVGGLSWSTDDQALESSFRQFGRILEAKVIIDRGSGRSRGFGFVTFADQRAMDEAIDR 63
Query: 95 MNAKYLDGWVIFVDPA 110
++ K LDG V+ V+ A
Sbjct: 64 LHNKELDGRVVTVNKA 79
>gi|351705901|gb|EHB08820.1| Polyadenylate-binding protein 5 [Heterocephalus glaber]
Length = 382
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 25 IRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTS 84
+R T +FV L DEKLKE F+ +GQ+ KV+ D A+G+SKGFGFV Y +
Sbjct: 190 VRTRDRATFTNVFVKNLGDDMNDEKLKELFSEYGQIESVKVVRD-ASGKSKGFGFVKYET 248
Query: 85 IEEAERAREGMNAKYLDGWVIFVDPAKSREAR 116
E A++A ++ K +DG V++V A+ + R
Sbjct: 249 HEAAQKAVLELHGKSMDGKVLYVGRAQKKIER 280
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ L DEKLKE F+ FG + +KV+ + G+ KGFG V ++S EEA +A + M
Sbjct: 304 IYIKNLDESIDDEKLKEEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATKAVDEM 361
Query: 96 NAKYLDGWVIFVDPAKSR 113
N + + + V + R
Sbjct: 362 NGRLVGSKALHVTLGQVR 379
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 13/103 (12%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + + L F+ FG ++ KV+ D SKG+ +V + S+ A RA M
Sbjct: 108 IFIKNLDKSIDNRGLFYLFSAFGNILSCKVVCD--DNGSKGYAYVHFDSLAAANRAIWHM 165
Query: 96 NAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGFRTNKT 138
N L+ ++V K +PE++ +E+ R T
Sbjct: 166 NGVRLNNRQVYVGRFK-----------FPEERAAEVRTRDRAT 197
>gi|302811189|ref|XP_002987284.1| hypothetical protein SELMODRAFT_37571 [Selaginella moellendorffii]
gi|300144919|gb|EFJ11599.1| hypothetical protein SELMODRAFT_37571 [Selaginella moellendorffii]
Length = 163
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 50/76 (65%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GLS T D+ L+ +F FG+++ +KVI DR +GRS+GFGFV++ + A +
Sbjct: 4 RCFVGGLSWSTDDQALESSFRQFGRILEAKVIIDRGSGRSRGFGFVTFADQRAMDEAIDR 63
Query: 95 MNAKYLDGWVIFVDPA 110
++ K LDG V+ V+ A
Sbjct: 64 LHNKELDGRVVTVNKA 79
>gi|224081795|ref|XP_002196994.1| PREDICTED: polyadenylate-binding protein 4 [Taeniopygia guttata]
Length = 629
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DE+LKE F +G+ + KV+TD TG+SKGFGFVS+ EEA +A E M
Sbjct: 193 VYIKNFGDDMDDERLKELFGKYGKTLSVKVMTD-PTGKSKGFGFVSFEKHEEANKAVEEM 251
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K ++G ++FV A+ + R
Sbjct: 252 NGKDINGKMLFVGRAQKKAER 272
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L++ L DEKL++ F+PFG + +KV+ + GRSKGFGFV ++S EEA +A M
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N + + ++V A+ +E R
Sbjct: 354 NGRIVGSKPLYVALAQRKEER 374
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L + F+ FG ++ KV+ D SKG+ FV + + + A+RA E M
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQDAADRAIEKM 158
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N L+ +FV KSR+ R
Sbjct: 159 NGMLLNDRKVFVGRFKSRKER 179
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V L T+ L E F+P G ++ +V D T RS G+ +V++ +AERA + M
Sbjct: 13 LYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 96 NAKYLDGWVIFV 107
N + G I +
Sbjct: 73 NFDVIKGKPIRI 84
>gi|356503807|ref|XP_003520694.1| PREDICTED: LOW QUALITY PROTEIN: glycine-rich RNA-binding protein 2,
mitochondrial-like [Glycine max]
Length = 148
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 1 MAFASSFRRALSSGSSILKSQLGS-IRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQ 59
MAF + L G++ L S + Y ++S +LF+ GLS D+ LK+A + FG
Sbjct: 1 MAFYNKVGNVLRQGATAAHKHLSSMLNYIRCMSSSKLFIGGLSYGVDDQSLKDASSGFGY 60
Query: 60 LV--YSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDG 102
+V +KVIT+R +GR +GFGFV++++ E A M+ K L+G
Sbjct: 61 VVDGKTKVITNRESGRXRGFGFVNFSNDESASSTLSTMDGKDLNG 105
>gi|348553000|ref|XP_003462315.1| PREDICTED: polyadenylate-binding protein 4-like isoform 4 [Cavia
porcellus]
Length = 631
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DE LKE F+ FG+ + KV+ D +G+SKGFGFVSY E+A +A E M
Sbjct: 193 VYIKNFGEEVDDENLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K ++G +IFV A+ + R
Sbjct: 252 NGKEINGKIIFVGRAQKKVER 272
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L++ L DEKL++ F+PFG + +KV+ + GRSKGFGFV ++S EEA +A M
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N + + ++V A+ +E R
Sbjct: 354 NGRIVGSKPLYVALAQRKEER 374
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L + F+ FG ++ KV+ D SKG+ FV + + E A++A E M
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKM 158
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N L+ +FV KSR+ R
Sbjct: 159 NGMLLNDRKVFVGRFKSRKER 179
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V L T+ L E F+P G ++ +V D T RS G+ +V++ +AERA + M
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 96 NAKYLDGWVIFV 107
N + G I +
Sbjct: 73 NFDVIKGKPIRI 84
>gi|255691172|ref|ZP_05414847.1| RNA-binding protein [Bacteroides finegoldii DSM 17565]
gi|260623075|gb|EEX45946.1| hypothetical protein BACFIN_06178 [Bacteroides finegoldii DSM
17565]
Length = 99
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 49/82 (59%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++++GLS T D L FA FG++ +KVI DR TG S+GF FV TS EE ++A + +
Sbjct: 3 IYIAGLSYRTNDADLTNLFAEFGEVSSAKVIMDRETGNSRGFAFVEMTSDEEGQKAIDEL 62
Query: 96 NAKYLDGWVIFVDPAKSREARP 117
N D VI V A+ R +P
Sbjct: 63 NGVEYDQKVISVSVARPRAEKP 84
>gi|348552998|ref|XP_003462314.1| PREDICTED: polyadenylate-binding protein 4-like isoform 3 [Cavia
porcellus]
Length = 615
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DE LKE F+ FG+ + KV+ D +G+SKGFGFVSY E+A +A E M
Sbjct: 193 VYIKNFGEEVDDENLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K ++G +IFV A+ + R
Sbjct: 252 NGKEINGKIIFVGRAQKKVER 272
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L++ L DEKL++ F+PFG + +KV+ + GRSKGFGFV ++S EEA +A M
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N + + ++V A+ +E R
Sbjct: 354 NGRIVGSKPLYVALAQRKEER 374
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L + F+ FG ++ KV+ D SKG+ FV + + E A++A E M
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKM 158
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N L+ +FV KSR+ R
Sbjct: 159 NGMLLNDRKVFVGRFKSRKER 179
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V L T+ L E F+P G ++ +V D T RS G+ +V++ +AERA + M
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 96 NAKYLDGWVIFV 107
N + G I +
Sbjct: 73 NFDVIKGKPIRI 84
>gi|348552996|ref|XP_003462313.1| PREDICTED: polyadenylate-binding protein 4-like isoform 2 [Cavia
porcellus]
Length = 644
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DE LKE F+ FG+ + KV+ D +G+SKGFGFVSY E+A +A E M
Sbjct: 193 VYIKNFGEEVDDENLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K ++G +IFV A+ + R
Sbjct: 252 NGKEINGKIIFVGRAQKKVER 272
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L++ L DEKL++ F+PFG + +KV+ + GRSKGFGFV ++S EEA +A M
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N + + ++V A+ +E R
Sbjct: 354 NGRIVGSKPLYVALAQRKEER 374
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L + F+ FG ++ KV+ D SKG+ FV + + E A++A E M
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKM 158
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N L+ +FV KSR+ R
Sbjct: 159 NGMLLNDRKVFVGRFKSRKER 179
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V L T+ L E F+P G ++ +V D T RS G+ +V++ +AERA + M
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 96 NAKYLDGWVIFV 107
N + G I +
Sbjct: 73 NFDVIKGKPIRI 84
>gi|350535477|ref|NP_001233126.1| cold-inducible RNA-binding protein [Sus scrofa]
gi|330847371|gb|AEC46651.1| cold inducible RNA binding protein transcript variant 3 [Sus
scrofa]
Length = 144
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 50/76 (65%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+ FGFV++ +I++A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRDFGFVTFENIDDAKDAMMA 66
Query: 95 MNAKYLDGWVIFVDPA 110
MN K +DG I VD A
Sbjct: 67 MNGKSVDGRQIRVDQA 82
>gi|259089109|ref|NP_001158591.1| cold inducible RNA binding protein [Oncorhynchus mykiss]
gi|225705082|gb|ACO08387.1| Cold-inducible RNA-binding protein [Oncorhynchus mykiss]
Length = 209
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 49/76 (64%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GL T + L+EAF+ +G + V+ DR T RS+GFGFV++ + E+A+ A
Sbjct: 6 KLFVGGLCFDTDETSLEEAFSKYGNIAKVDVVRDRETRRSRGFGFVTFENPEDAKDAMAA 65
Query: 95 MNAKYLDGWVIFVDPA 110
MN K +DG +I VD A
Sbjct: 66 MNGKSVDGRMIRVDEA 81
>gi|348552994|ref|XP_003462312.1| PREDICTED: polyadenylate-binding protein 4-like isoform 1 [Cavia
porcellus]
Length = 660
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DE LKE F+ FG+ + KV+ D +G+SKGFGFVSY E+A +A E M
Sbjct: 193 VYIKNFGEEVDDENLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K ++G +IFV A+ + R
Sbjct: 252 NGKEINGKIIFVGRAQKKVER 272
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L++ L DEKL++ F+PFG + +KV+ + GRSKGFGFV ++S EEA +A M
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N + + ++V A+ +E R
Sbjct: 354 NGRIVGSKPLYVALAQRKEER 374
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L + F+ FG ++ KV+ D SKG+ FV + + E A++A E M
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKM 158
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N L+ +FV KSR+ R
Sbjct: 159 NGMLLNDRKVFVGRFKSRKER 179
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V L T+ L E F+P G ++ +V D T RS G+ +V++ +AERA + M
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 96 NAKYLDGWVIFV 107
N + G I +
Sbjct: 73 NFDVIKGKPIRI 84
>gi|160899081|ref|YP_001564663.1| RNP-1 like RNA-binding protein [Delftia acidovorans SPH-1]
gi|333914782|ref|YP_004488514.1| RNP-1 like RNA-binding protein [Delftia sp. Cs1-4]
gi|160364665|gb|ABX36278.1| RNP-1 like RNA-binding protein [Delftia acidovorans SPH-1]
gi|333744982|gb|AEF90159.1| RNP-1 like RNA-binding protein [Delftia sp. Cs1-4]
Length = 115
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 49/82 (59%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
+ +++V L TD L+ FA FG + +KV+ DR TGRSKGFGFV S E A+ A
Sbjct: 2 TTKIYVGNLPYSVTDSSLESNFAEFGNVASAKVMMDRETGRSKGFGFVEMASAEVAQAAI 61
Query: 93 EGMNAKYLDGWVIFVDPAKSRE 114
G++ +DG I V+ A+ RE
Sbjct: 62 TGLHGMSVDGRSIVVNLARPRE 83
>gi|340546033|gb|AEK51815.1| cytoplasmic poly(A) binding protein 1 [Ichthyophis bannanicus]
Length = 177
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DE+LKE F+ +G+ + KV+TD +TG+SKGFGFVS+ E+A +A E M
Sbjct: 90 VYIKNFGDDMDDERLKEMFSKYGKTLSVKVMTD-STGKSKGFGFVSFEKHEDANKAVEEM 148
Query: 96 NAKYLDGWVIFVDPAKSREARPPP 119
N K ++G ++FV A+ + R
Sbjct: 149 NGKDVNGKMVFVGRAQKKVERQAE 172
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 41 LSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYL 100
L + ++ L + F+ FG ++ KV+ D SKG+ FV + + + A+RA E MN L
Sbjct: 3 LDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQDAADRAIEKMNGMLL 60
Query: 101 DGWVIFVDPAKSREARPPP 119
+ +FV KSR+ R
Sbjct: 61 NDRKVFVGRFKSRKEREAE 79
>gi|298248948|ref|ZP_06972752.1| RNP-1 like RNA-binding protein [Ktedonobacter racemifer DSM 44963]
gi|297546952|gb|EFH80819.1| RNP-1 like RNA-binding protein [Ktedonobacter racemifer DSM 44963]
Length = 96
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
RL+V LS TD++L + FA G++ +V+T+R TGRSKGFGFV + ++A A E
Sbjct: 2 RLYVGNLSYRITDQELGDFFAQIGRVQRVRVVTERETGRSKGFGFVDMLNEQDARAAIEQ 61
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPPPYP 124
+N K L G + V A++RE RP P +P
Sbjct: 62 LNGKRLGGRALTV--AEARE-RPESPERWP 88
>gi|224069480|ref|XP_002326357.1| predicted protein [Populus trichocarpa]
gi|222833550|gb|EEE72027.1| predicted protein [Populus trichocarpa]
Length = 286
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 53/85 (62%)
Query: 32 TSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERA 91
+S R++V LS D L+ F G+++ +KV+ DR +GRSKGFGFV+Y+S EE E A
Sbjct: 200 SSNRVYVGNLSWNVDDSALESLFREKGKVMDAKVVYDRDSGRSKGFGFVTYSSAEEVEDA 259
Query: 92 REGMNAKYLDGWVIFVDPAKSREAR 116
+ +N LDG I V A+++ R
Sbjct: 260 VDSLNGAELDGRAIRVSVAEAKPRR 284
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 49/102 (48%), Gaps = 9/102 (8%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV L +L + F G + +V D+ TGRS+GFGFV+ ++IEE E A +
Sbjct: 92 QLFVGNLPFNVNSAQLADLFKSAGNVEMVEVKYDKVTGRSRGFGFVTMSTIEEVEAASQQ 151
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGFRTN 136
N LDG + V+ PPP E S + R N
Sbjct: 152 FNGYELDGRPLRVNSG---------PPPQRETSFSRLPQREN 184
>gi|375143372|ref|YP_005005813.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
gi|361057418|gb|AEV96409.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
Length = 104
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 51/81 (62%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++VS LS DE LK+ FAP+G++ +KVITDR TGRS+GFGFV T +++A +
Sbjct: 3 IYVSNLSFDVQDEDLKDFFAPYGEVSSAKVITDRETGRSRGFGFVEMTDEAASKKAIAEL 62
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
+ ++ I V AK RE R
Sbjct: 63 DGATVENRTISVSVAKPREER 83
>gi|387913830|gb|AFK10524.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392873312|gb|AFM85488.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392873324|gb|AFM85494.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392873420|gb|AFM85542.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392873526|gb|AFM85595.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392873598|gb|AFM85631.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392877296|gb|AFM87480.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
Length = 136
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 53/79 (67%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GL+ T ++ L+E F+ +GQ+ ++I DR TG S+GFGFV++ S ++A+ A
Sbjct: 6 KLFVGGLNFNTEEQSLEEVFSEYGQVSEVRIIRDRDTGTSRGFGFVTFESPDDAQDALTS 65
Query: 95 MNAKYLDGWVIFVDPAKSR 113
MN + L+G I VD A+ +
Sbjct: 66 MNGRSLEGRQIRVDRAEKK 84
>gi|330847367|gb|AEC46649.1| cold inducible RNA binding protein transcript variant 1 [Sus
scrofa]
Length = 172
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 50/76 (65%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+ FGFV++ +I++A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRDFGFVTFENIDDAKDAMMA 66
Query: 95 MNAKYLDGWVIFVDPA 110
MN K +DG I VD A
Sbjct: 67 MNGKSVDGRQIRVDQA 82
>gi|5929884|gb|AAD56625.1|AF151373_1 nucleolin-related protein NRP [Rattus norvegicus]
Length = 715
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E L+E+F V ++++TDR TG SKGFGFV + S E+A+ A+
Sbjct: 576 SKTLFVKGLSEDTTEETLRESF---DGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAK 632
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
E M +DG + +D AK +
Sbjct: 633 EAMEDGEIDGNKVTLDWAKPK 653
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 28 NSTLT--SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSI 85
NST + S L +S LS T+E L+E F + + KV ++ G+SKG+ F+ + S
Sbjct: 483 NSTWSGESKTLVLSNLSYSATEETLQEVFE---KATFIKVPQNQ-NGKSKGYAFIEFASF 538
Query: 86 EEAERAREGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
E+A+ A N + ++G I + E + P P QPS+ F
Sbjct: 539 EDAKEALNSCNKREIEGRAIRL------ELQGPRGSPNARSQPSKTLF 580
>gi|291514454|emb|CBK63664.1| RNA-binding proteins (RRM domain) [Alistipes shahii WAL 8301]
Length = 116
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 50/81 (61%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++VS LS T+ E L F FG++ + VITDR TGRS+GFGFV + EE ++A + +
Sbjct: 3 IYVSHLSWGTSSEGLGNLFMQFGEVASANVITDRETGRSRGFGFVEMPNEEEGQKAIDQL 62
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N +G I V+ A+ RE R
Sbjct: 63 NGTSFEGQTITVNVARPREER 83
>gi|403271841|ref|XP_003927812.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Saimiri boliviensis boliviensis]
Length = 647
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 47 DEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIF 106
DE+LK+ F+ +G+ + KV+TD ++G+SKGFGFVS+ S E A++A E MN + ++G +IF
Sbjct: 480 DERLKDVFSKYGKTLSVKVMTD-SSGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIF 538
Query: 107 VDPAKSREARPPPPPPYPEQQPSE 130
V A+ + R EQ +E
Sbjct: 539 VARAQKKVERQAELKQMFEQLKNE 562
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L E F+ FG+++ SKV++D SKG+ FV + + A+RA E M
Sbjct: 377 VFIKNLDKSIDNKTLYEHFSAFGRILSSKVMSDDQG--SKGYAFVHFQNQSAADRAIEEM 434
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K L G +FV KSR+ R
Sbjct: 435 NGKLLQGCKVFVGRFKSRQDR 455
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V L DEKL++ F+ FG + KV+ + G+SKGFG + ++S E+A +A
Sbjct: 571 KLYVKNLDDTIDDEKLRKEFSSFGSISRVKVMQEE--GQSKGFGLICFSSPEDALKAMTE 628
Query: 95 MNAKYL 100
MN + L
Sbjct: 629 MNGRIL 634
>gi|88911212|gb|ABD58896.1| chloroplast single strand DNA binding protein [Mesostigma viride]
Length = 299
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 55/90 (61%)
Query: 29 STLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEA 88
ST S +L+V L+ DE L +AF+ FG++ ++V+ DR +GRS+GF FV+ S + A
Sbjct: 85 STAASTKLYVGNLAWSCDDEMLNQAFSQFGEVKAAEVVLDRESGRSRGFAFVTMASPDAA 144
Query: 89 ERAREGMNAKYLDGWVIFVDPAKSREARPP 118
E+AR G++ L G I V+ + + R P
Sbjct: 145 EKARRGLDGTELAGRAIRVNFPQPKGERAP 174
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
RL+V L D L++ F FG + Y++V+ DR +GRS+GF FV+ ++ EEA A
Sbjct: 205 RLYVGNLPWSMDDGMLEDLFMEFGTVNYARVVMDRDSGRSRGFAFVALSTPEEANEAMAN 264
Query: 95 MNAKYLDGWVIFVDPAK----SREARPPPPP 121
++ + + G I V+ A +RE R P
Sbjct: 265 LDGEEIGGRTIRVNLATKSSGNREGRERRAP 295
>gi|74179817|dbj|BAE36484.1| unnamed protein product [Mus musculus]
Length = 707
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKE+F V ++++TDR TG SKGFGF+ + S E+A+ A+
Sbjct: 568 SKTLFVKGLSEDTTEETLKESFE---GSVRARIVTDRETGSSKGFGFLDFNSEEDAKAAK 624
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
E M +DG + +D AK +
Sbjct: 625 EAMEDGEIDGNKVTLDWAKPK 645
>gi|168008942|ref|XP_001757165.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691663|gb|EDQ78024.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 161
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R FV GLS TTD+ L+E F FG ++ +KVI D+ TG S+GFGFV++ + A E
Sbjct: 8 RCFVGGLSWNTTDKGLEEEFRRFGNVLEAKVIVDKETGHSRGFGFVNFGDERSMDEAIER 67
Query: 95 MNAKYLDGWVIFVDPAK 111
++ K LDG I V+ AK
Sbjct: 68 LHGKELDGRPITVNRAK 84
>gi|341893520|gb|EGT49455.1| CBN-TIAR-2 protein [Caenorhabditis brenneri]
Length = 420
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 44/66 (66%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS KLKEAF PFG++ +K+I D T ++KG+GFVSY E+AERA E
Sbjct: 133 HVFVGDLSSEIDSTKLKEAFLPFGEVSEAKIIRDTTTNKAKGYGFVSYPRREDAERAIEQ 192
Query: 95 MNAKYL 100
MN ++L
Sbjct: 193 MNGQWL 198
>gi|294464377|gb|ADE77701.1| unknown [Picea sitchensis]
Length = 299
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 50/78 (64%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R+++ LS +E L E F+ G L+ +K++ DR TGRS+GFGF+++++ EAE A
Sbjct: 217 RVYIGNLSWDVNEEILNEVFSEHGNLLDAKIVFDRETGRSRGFGFITFSTQSEAEAAVAS 276
Query: 95 MNAKYLDGWVIFVDPAKS 112
+N K L+G + VD A S
Sbjct: 277 LNGKELEGRAMRVDLALS 294
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 49 KLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVD 108
+L G + +VI D+ TGRS+GF F + +S+E+A E ++ G + V+
Sbjct: 126 ELAGIIQEHGSVEMVEVIYDQNTGRSRGFAFATMSSVEDANALVENLDGSQYGGRTLRVN 185
>gi|353241625|emb|CCA73428.1| related to NSR1-nuclear localization sequence binding protein
[Piriformospora indica DSM 11827]
Length = 657
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 49/83 (59%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS DE LK F G++V + V DR TGRSKGFG+VS+++ E AE+A
Sbjct: 392 NIFVGKLSWNVDDEWLKSEFEACGEVVRASVQMDRQTGRSKGFGYVSFSTPEAAEKAIAE 451
Query: 95 MNAKYLDGWVIFVDPAKSREARP 117
MN K +DG + V+ A + P
Sbjct: 452 MNGKEIDGRAVNVNAATPKTPNP 474
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 47/79 (59%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
LFV +S ++ L E F G +V ++ TDR TG+ KGFG+V +TS+E A+ A +
Sbjct: 492 LFVGNVSFNANEDMLWETFGEHGDIVSVRLPTDRETGQMKGFGYVEFTSVENAKSAFNAL 551
Query: 96 NAKYLDGWVIFVDPAKSRE 114
N K + G I +D ++ R+
Sbjct: 552 NGKDIAGRNIRLDFSQPRD 570
>gi|406831764|ref|ZP_11091358.1| RNP-1 like RNA-binding protein [Schlesneria paludicola DSM 18645]
Length = 122
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 51/82 (62%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S +L+V LS T++ L++ FA G++ ++++TDR TGRSKGFGFV AE A
Sbjct: 2 STKLYVGNLSYNATNQTLEQMFAQHGEVRSAQIVTDRDTGRSKGFGFVEMGDSRSAEAAI 61
Query: 93 EGMNAKYLDGWVIFVDPAKSRE 114
+N + +DG + V+ A+ RE
Sbjct: 62 SALNGQEVDGRALTVNEARPRE 83
>gi|357152395|ref|XP_003576105.1| PREDICTED: uncharacterized protein LOC100823193 [Brachypodium
distachyon]
Length = 267
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 63/113 (55%), Gaps = 3/113 (2%)
Query: 1 MAFASSFRRALSSGSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQL 60
MA A+ L +S + +IR ++S ++FV GLS T + L+EAF +G +
Sbjct: 1 MALANKLGNLLKKATSSNPTLYQAIR---CMSSSKIFVGGLSYNTDETGLREAFTHYGDI 57
Query: 61 VYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSR 113
+ +K+I D + RS+GFGF++Y + ++A+ A ++ K L G I V A R
Sbjct: 58 IDAKIIVDHESRRSRGFGFITYAAEDQAKAAIMALDGKELHGRNIRVSEANER 110
>gi|145219698|ref|YP_001130407.1| RNP-1 like RNA-binding protein [Chlorobium phaeovibrioides DSM 265]
gi|145205862|gb|ABP36905.1| RNP-1 like RNA-binding protein [Chlorobium phaeovibrioides DSM 265]
Length = 90
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 51/88 (57%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++V L +++ L++AF+ FGQ+ + +I D+ +GRSKGFGFV + + A A E M
Sbjct: 3 IYVGNLPYTVSEDDLRDAFSEFGQVESANIIMDKFSGRSKGFGFVEMSDDDAAREAIEAM 62
Query: 96 NAKYLDGWVIFVDPAKSREARPPPPPPY 123
+ K G I V+ AK RE R P Y
Sbjct: 63 HNKDFMGRSIMVNEAKPREERAPRRDHY 90
>gi|212412|gb|AAA48983.1| nucleolin/C23, partial [Gallus gallus]
Length = 288
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 52/79 (65%), Gaps = 3/79 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E L+E+F + ++++TDR TG SKGFGFV ++S E+A+ A+
Sbjct: 146 SKTLFVRGLSEDTTEETLRESFEG---SISARIVTDRDTGSSKGFGFVDFSSPEDAKAAK 202
Query: 93 EGMNAKYLDGWVIFVDPAK 111
E M +DG + +D AK
Sbjct: 203 EAMEDGEIDGNKVTLDFAK 221
>gi|365088445|ref|ZP_09327889.1| RNP-1 like RNA-binding protein [Acidovorax sp. NO-1]
gi|363417101|gb|EHL24188.1| RNP-1 like RNA-binding protein [Acidovorax sp. NO-1]
Length = 111
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 50/84 (59%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S +++V L TD L+ F+ FG + +KV+ DR TGRSKGFGFV + E A+ A
Sbjct: 2 SSKIYVGNLPYSVTDASLQSNFSEFGGVSSAKVMMDRETGRSKGFGFVEMANAEVAQAAI 61
Query: 93 EGMNAKYLDGWVIFVDPAKSREAR 116
G++ +DG I V+ A+ RE R
Sbjct: 62 SGLHGMSVDGRTIVVNLARPREER 85
>gi|333381249|ref|ZP_08472931.1| hypothetical protein HMPREF9455_01097 [Dysgonomonas gadei ATCC
BAA-286]
gi|332830219|gb|EGK02847.1| hypothetical protein HMPREF9455_01097 [Dysgonomonas gadei ATCC
BAA-286]
Length = 107
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 49/89 (55%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F++GLS D LK+ F+ +G++ +KVI D+ATGRSKG+GFV ++A E +
Sbjct: 3 IFIAGLSYSINDNDLKDLFSEYGEITSAKVIMDKATGRSKGYGFVELADNAAGQKAIEEL 62
Query: 96 NAKYLDGWVIFVDPAKSREARPPPPPPYP 124
N DG I V A+ R P Y
Sbjct: 63 NGAEYDGRTISVSEARPRTEGDRPRRSYD 91
>gi|1350821|sp|P49314.1|ROC2_NICPL RecName: Full=31 kDa ribonucleoprotein, chloroplastic; AltName:
Full=CP-RBP31; Flags: Precursor
gi|19710|emb|CAA46233.1| RNA binding protein 31 [Nicotiana plumbaginifolia]
Length = 292
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 52/85 (61%)
Query: 29 STLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEA 88
S +S R++V LS D LKE F+ G +V +KV+ DR +GRS+GFGFV+Y+S +E
Sbjct: 203 SVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAKEV 262
Query: 89 ERAREGMNAKYLDGWVIFVDPAKSR 113
A + +N LDG I V A+ R
Sbjct: 263 NDAIDSLNGIDLDGRSIRVSAAEER 287
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV L L F G + +VI D+ +GRS+GFGFV+ ++ EE E A +
Sbjct: 89 KLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKEEVEAAEQQ 148
Query: 95 MNAKYLDGWVIFVD----PAK 111
N +DG I V+ PAK
Sbjct: 149 FNGYEIDGRAIRVNAGPAPAK 169
>gi|356566197|ref|XP_003551321.1| PREDICTED: uncharacterized protein LOC100808038 [Glycine max]
Length = 364
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 7/100 (7%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V+GLS T +L++ FA G+++ ++ D T S+GFGFV+ ++EEAER + +
Sbjct: 52 LYVTGLSPRITKRELEKHFAAEGKVIDVHLVVDPWTRESRGFGFVTMETLEEAERCVKYL 111
Query: 96 NAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGFRT 135
N L+G VI V+ AK R R P P Y +G RT
Sbjct: 112 NRSVLEGRVITVEKAKRRRGRTPTPGRY-------LGLRT 144
>gi|242036065|ref|XP_002465427.1| hypothetical protein SORBIDRAFT_01g038690 [Sorghum bicolor]
gi|241919281|gb|EER92425.1| hypothetical protein SORBIDRAFT_01g038690 [Sorghum bicolor]
Length = 727
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
L++ L D L F+ FG +V +KVI DR TG+SKG+GFV Y+ + +A A
Sbjct: 429 NLYIGYLPPTMDDAGLVSLFSQFGDIVMAKVIKDRNTGQSKGYGFVKYSDVSQANAAIAA 488
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPPP 122
MN +L+G VI V A +PP P P
Sbjct: 489 MNGHHLEGRVIAVRVA----GKPPQPAP 512
>gi|226499830|ref|NP_001140942.1| uncharacterized protein LOC100273020 [Zea mays]
gi|194701856|gb|ACF85012.1| unknown [Zea mays]
Length = 473
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 51/95 (53%)
Query: 26 RYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSI 85
+ S SP LFV LS +E L+ F FG+L +++T+R TGRS+GFG+V Y
Sbjct: 217 KTESADNSPNLFVGNLSWNVDEEWLRREFESFGELSGVRIMTERETGRSRGFGYVEYADA 276
Query: 86 EEAERAREGMNAKYLDGWVIFVDPAKSREARPPPP 120
A+ A E LDG I +D AK R+A P
Sbjct: 277 SSAKAAYEAKKDTELDGRTINLDYAKPRDANSQAP 311
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 32 TSPR---LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEA 88
TSP LFV L + ++E F GQ+ ++ TD TGR KG+G+V ++S++EA
Sbjct: 326 TSPESNTLFVGNLVFGVDENAVREVFEGQGQIQGVRLPTDAETGRPKGYGYVEFSSVDEA 385
Query: 89 ERAREGMNAKYLDGWVIFVD 108
+A + + G I +D
Sbjct: 386 RQALNELQGTDIGGRAIRLD 405
>gi|34785785|gb|AAH57481.1| Cirbp protein [Danio rerio]
Length = 121
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 48/71 (67%)
Query: 40 GLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKY 99
GLS TT++ L+EAF+ +G + VI DR T RS+GFGFV++ + E+A+ A MN K
Sbjct: 4 GLSYDTTEQSLEEAFSKYGTIAKVDVIRDRETDRSRGFGFVTFENPEDAKDAMAAMNGKQ 63
Query: 100 LDGWVIFVDPA 110
+DG +I VD A
Sbjct: 64 VDGRMIRVDEA 74
>gi|402870468|ref|XP_003899242.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Papio anubis]
Length = 496
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DE+LK+ F+ +G+ + KV+TD + G+SKGFGFVS+ S E A++A E M
Sbjct: 318 IYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTD-SRGKSKGFGFVSFDSHEAAKKAVEEM 376
Query: 96 NAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSE 130
N + ++G +IFV A+ + R EQ E
Sbjct: 377 NGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRE 411
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V L DEKL+ F+ FG ++ KV+ + G+SKGFGF+ ++S+E+A +A
Sbjct: 420 KLYVKNLDDTIDDEKLRNEFSSFGSIIRVKVM--QQEGQSKGFGFICFSSLEDATKAMIE 477
Query: 95 MNAKYL 100
MN ++L
Sbjct: 478 MNGRFL 483
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L E F+ FG+++ SKV++D SKG+ FV + + A+RA E M
Sbjct: 226 VFIKNLDKSIDNKTLYEHFSGFGKILSSKVMSDDQG--SKGYAFVHFQNQSAADRAIEEM 283
Query: 96 NAKYLDGWVIFVDPAKSREARPP 118
N + L +FV K+R+ R
Sbjct: 284 NGRLLKSCKVFVGRFKNRKDREA 306
>gi|392593257|gb|EIW82582.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 136
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V LS T D+ L+ AF +G + S V+ DR TGRS+GFGFV++T+ EEA A
Sbjct: 4 KLYVGNLSWSTGDDGLRNAFGRYGAVTDSIVMRDRETGRSRGFGFVTFTTAEEANAAMGQ 63
Query: 95 MNAKYLDGWVIFVDPAKSR 113
M+ LDG I V+ A ++
Sbjct: 64 MDQTELDGRTIRVNVANAK 82
>gi|260825255|ref|XP_002607582.1| hypothetical protein BRAFLDRAFT_71460 [Branchiostoma floridae]
gi|229292930|gb|EEN63592.1| hypothetical protein BRAFLDRAFT_71460 [Branchiostoma floridae]
Length = 187
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 45/66 (68%)
Query: 48 EKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFV 107
E L+ F+ +G+++ KVITDR TGRS+GFGFV+Y++ +A A++ MN LDG I V
Sbjct: 47 ESLEATFSEYGEIIDCKVITDRETGRSRGFGFVTYSNDSDASEAKKCMNNTDLDGRQIRV 106
Query: 108 DPAKSR 113
D A +
Sbjct: 107 DYASKK 112
>gi|406959178|gb|EKD86596.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 81
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 50/81 (61%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+FV L D KL E FA G +V ++V+ DR TGRS+GFGFV ++ EEA+ A + +
Sbjct: 1 MFVGSLPWAVDDAKLAELFAQAGNVVSAQVVKDRETGRSRGFGFVEMSTDEEAQNAVKNL 60
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N ++G I V+ A+ RE R
Sbjct: 61 NGTDVEGRKIVVNIARPREDR 81
>gi|351706751|gb|EHB09670.1| Polyadenylate-binding protein 4-like protein [Heterocephalus
glaber]
Length = 370
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DE+L+ F+ +G+ + KV+TD ++G+SKGFGFVS+ S E A+RA E M
Sbjct: 192 VYIKNFGDDMDDERLQGVFSRYGKTLSVKVMTD-SSGKSKGFGFVSFESHEAAKRAVEEM 250
Query: 96 NAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSE 130
N K ++G ++FV A+ + R EQ E
Sbjct: 251 NGKDMNGQLVFVGRAQKKVERQAELKHMFEQMKKE 285
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+FV L R ++ L E F+ FG+++ SKV++D SKG+ FV + S A A E M
Sbjct: 100 VFVKNLDRSVDNKTLYEHFSGFGKILSSKVMSDDQG--SKGYAFVHFQSQSAANCAIEQM 157
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K ++ +FV P K R+ R
Sbjct: 158 NGKVINDRPVFVAPFKPRKDR 178
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V L DE+L++ F+ FG + KV+ + G S+GFG + ++S EEA +A
Sbjct: 294 KLYVKNLDDTVDDEQLRKEFSSFGSITRVKVM--KEEGYSRGFGLICFSSPEEAAKALTE 351
Query: 95 MNAKYL 100
MN + L
Sbjct: 352 MNGRVL 357
>gi|343958808|dbj|BAK63259.1| cold-inducible RNA-binding protein [Pan troglodytes]
Length = 225
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+G GFV++ +I++A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGSGFVTFENIDDAKDAMMA 66
Query: 95 MNAKYLDGWVIFVDPA-KSREAR 116
MN K +DG I VD A KS + R
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNR 89
>gi|126304035|ref|XP_001381740.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Monodelphis domestica]
Length = 409
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS T E +K AFAPFG++ ++V+ D ATG+SKG+GFVS+ + +AE A +
Sbjct: 121 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 180
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPP 121
M ++L G I + A R PP P
Sbjct: 181 MGGQWLGGRQIRTNWA----TRKPPAP 203
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 49/98 (50%), Gaps = 11/98 (11%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++ G++ T++ +++ F+PFGQ++ +V D KG+ FV + S E A A +
Sbjct: 230 VYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSV 283
Query: 96 NAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
N ++G V+ K + P QQ +++G+
Sbjct: 284 NGTTIEGHVV-----KCYWGKETLDMLNPVQQQNQIGY 316
>gi|440800950|gb|ELR21976.1| RNA recognition motif domain containing protein, partial
[Acanthamoeba castellanii str. Neff]
Length = 325
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L+V+GL T EKL+E F G + K+I D +GRS+GF FVS+ + E+A AR+
Sbjct: 12 KLYVAGLHWETNREKLQELFGQHGTVTDVKLIVDHFSGRSRGFAFVSFATSEDATAARDA 71
Query: 95 MNAKYLDGWVIFVDPA 110
MN+ +DG IFV A
Sbjct: 72 MNSADVDGRRIFVKKA 87
>gi|387017378|gb|AFJ50807.1| Nucleolysin TIA-1 isoform p40 [Crotalus adamanteus]
Length = 392
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS T E +K AFAPFG++ ++V+ D ATG+SKG+GFVS+ + +AE A +
Sbjct: 107 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 166
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPP 121
M ++L G I + A R PP P
Sbjct: 167 MGGQWLGGRQIRTNWA----TRKPPAP 189
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 50/98 (51%), Gaps = 11/98 (11%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++ G++ T++ +++ F+PFGQ++ +V D KG+ FV + S E A A +
Sbjct: 216 VYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSV 269
Query: 96 NAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
N ++G V+ K + P P QQ +++G+
Sbjct: 270 NGTTIEGHVV-----KCYWGKETPDMINPIQQQNQVGY 302
>gi|431922543|gb|ELK19486.1| Polyadenylate-binding protein 4 [Pteropus alecto]
Length = 720
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DE LKE F+ FG+ + KV+ D +G+SKGFGFVSY E+A +A E M
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K ++G VIFV A+ + R
Sbjct: 252 NGKEINGKVIFVGRAQKKVER 272
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L++ L DEKL++ F+PFG + +KV+ + GRSKGFGFV ++S EEA +A M
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N + + ++V A+ +E R
Sbjct: 354 NGRIVGSKPLYVALAQRKEER 374
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L + F+ FG ++ KV+ D SKG+ FV + + E A++A E M
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKM 158
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N L+ +FV KSR+ R
Sbjct: 159 NGMLLNDRKVFVGRFKSRKER 179
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V L T+ L E F+P G ++ +V D T RS G+ +V++ +AERA + M
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 96 NAKYLDG 102
N + G
Sbjct: 73 NFDVIKG 79
>gi|298248970|ref|ZP_06972774.1| RNP-1 like RNA-binding protein [Ktedonobacter racemifer DSM 44963]
gi|297546974|gb|EFH80841.1| RNP-1 like RNA-binding protein [Ktedonobacter racemifer DSM 44963]
Length = 104
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R++V GL +T++ L + F GQ+ + VITDR TGRSKGFGFV +S +E A E
Sbjct: 2 RIYVGGLPYQSTEQDLIQLFEQIGQVTSATVITDRETGRSKGFGFVEMSSDDETRAAIEQ 61
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMG 132
+N L I V+ A RE R P Y + S G
Sbjct: 62 LNGSTLGDRTITVNEA--RERRAPGGGGYQSRGRSSNG 97
>gi|335291035|ref|XP_003127861.2| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Sus scrofa]
Length = 644
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DE LKE F+ FG+ + KV+ D +G+SKGFGFVSY E+A +A E M
Sbjct: 193 VYIKNFGEEVDDENLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K + G VIFV A+ + R
Sbjct: 252 NGKEISGKVIFVGRAQKKVER 272
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L++ L DEKL++ F+PFG + +KV+ + GRSKGFGFV ++S EEA +A M
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N + + ++V A+ +E R
Sbjct: 354 NGRIVGSKPLYVALAQRKEER 374
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L + F+ FG ++ KV+ D SKG+ FV + + E A++A E M
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKM 158
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N L+ +FV KSR+ R
Sbjct: 159 NGMLLNDRKVFVGRFKSRKER 179
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V L T+ L E F+P G ++ +V D T RS G+ +V++ +AERA + M
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 96 NAKYLDGWVIFV 107
N + G I +
Sbjct: 73 NFDVIKGKPIRI 84
>gi|426335862|ref|XP_004029425.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Gorilla gorilla gorilla]
Length = 353
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS T E +K AFAPFG++ ++V+ D ATG+SKG+GFVS+ + +AE A +
Sbjct: 74 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 133
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPP 121
M ++L G I + A R PP P
Sbjct: 134 MGGQWLGGRQIRTNWA----TRKPPAP 156
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 39/70 (55%), Gaps = 6/70 (8%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++ G++ T++ +++ F+PFGQ++ +V D KG+ FV + S E A A +
Sbjct: 183 VYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSV 236
Query: 96 NAKYLDGWVI 105
N ++G V+
Sbjct: 237 NGTTIEGHVV 246
>gi|350585908|ref|XP_003482078.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Sus scrofa]
Length = 660
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DE LKE F+ FG+ + KV+ D +G+SKGFGFVSY E+A +A E M
Sbjct: 193 VYIKNFGEEVDDENLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K + G VIFV A+ + R
Sbjct: 252 NGKEISGKVIFVGRAQKKVER 272
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L++ L DEKL++ F+PFG + +KV+ + GRSKGFGFV ++S EEA +A M
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N + + ++V A+ +E R
Sbjct: 354 NGRIVGSKPLYVALAQRKEER 374
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L + F+ FG ++ KV+ D SKG+ FV + + E A++A E M
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKM 158
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N L+ +FV KSR+ R
Sbjct: 159 NGMLLNDRKVFVGRFKSRKER 179
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V L T+ L E F+P G ++ +V D T RS G+ +V++ +AERA + M
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 96 NAKYLDGWVIFV 107
N + G I +
Sbjct: 73 NFDVIKGKPIRI 84
>gi|302543566|ref|ZP_07295908.1| RNA-binding protein [Streptomyces hygroscopicus ATCC 53653]
gi|302461184|gb|EFL24277.1| RNA-binding protein [Streptomyces himastatinicus ATCC 53653]
Length = 86
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S RL V LS TT + L++ FAPFG ++ + VITDR TGRS+GFGFV + +AE+A
Sbjct: 2 SKRLHVGNLSYQTTKDDLEKLFAPFGAVMDATVITDRDTGRSRGFGFVEMADM-DAEKAM 60
Query: 93 EGMNAKYLDGWVIFVDPAKS 112
++ + ++G + V A++
Sbjct: 61 AQLDGQEMNGRCVTVTEARA 80
>gi|406956570|gb|EKD84644.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 81
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 50/81 (61%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+FV L D KL E FA G +V ++V+ DR TGRS+GFGFV ++ EEA+ A + +
Sbjct: 1 MFVGSLPWAVDDAKLGEIFAQAGNVVSAQVVKDRETGRSRGFGFVEMSTDEEAQNAVKNL 60
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N ++G I V+ A+ RE R
Sbjct: 61 NGADVEGRKIVVNIARPREDR 81
>gi|425781927|gb|EKV19861.1| hypothetical protein PDIG_00280 [Penicillium digitatum PHI26]
gi|425784024|gb|EKV21834.1| hypothetical protein PDIP_02540 [Penicillium digitatum Pd1]
Length = 98
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 54/79 (68%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+++V LS T+DE L+ AF FG +V S V+ DR TGRS+GFGFV+++S EEAE A
Sbjct: 3 KIYVGNLSWHTSDESLRAAFGEFGNIVDSIVMVDRETGRSRGFGFVTFSSAEEAEAAINA 62
Query: 95 MNAKYLDGWVIFVDPAKSR 113
+N + LDG I V+ A +R
Sbjct: 63 LNEQDLDGRRIRVNLANAR 81
>gi|402891170|ref|XP_003908827.1| PREDICTED: nucleolysin TIA-1 isoform p40, partial [Papio anubis]
Length = 377
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS T E +K AFAPFG++ ++V+ D ATG+SKG+GFVS+ + +AE A +
Sbjct: 98 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 157
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPP 121
M ++L G I + A R PP P
Sbjct: 158 MGGQWLGGRQIRTNWA----TRKPPAP 180
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 29 STLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEA 88
S+ ++ ++ G++ T++ +++ F+PFGQ++ +V D KG+ FV + S E A
Sbjct: 200 SSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESA 253
Query: 89 ERAREGMNAKYLDGWVI 105
A +N ++G V+
Sbjct: 254 AHAIVSVNGTTIEGHVV 270
>gi|345879103|ref|ZP_08830782.1| hypothetical protein Rifp1Sym_dl00160 [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344223892|gb|EGV50316.1| hypothetical protein Rifp1Sym_dl00160 [endosymbiont of Riftia
pachyptila (vent Ph05)]
Length = 93
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 49/78 (62%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++V LS TTD++L E FAP+G + +KVI DR TGRS+GFGFV + A+ A + +
Sbjct: 5 IYVGNLSWNTTDDELHELFAPYGAVDSAKVIMDRETGRSRGFGFVEMSDNSAAQSAIDSL 64
Query: 96 NAKYLDGWVIFVDPAKSR 113
N L G + V+ AK R
Sbjct: 65 NDSQLGGRSLRVNEAKPR 82
>gi|291225685|ref|XP_002732813.1| PREDICTED: splicing factor, arginine/serine-rich 10-like
[Saccoglossus kowalevskii]
Length = 269
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 58/101 (57%), Gaps = 6/101 (5%)
Query: 32 TSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERA 91
T+ L V GLS TT+ +L+EAF +G + V+ D +GRS+GF F+SY S E+A A
Sbjct: 113 TNNCLGVFGLSLSTTERELREAFGRYGPIANINVVYDHQSGRSRGFAFLSYESEEDAREA 172
Query: 92 REGMNAKYLDGWVIFVDPAKSREARPPPP------PPYPEQ 126
++ N +DG I VD + ++ A P P P YP++
Sbjct: 173 KDRTNGMEIDGRRIRVDYSITKRAHTPTPGIYMGRPTYPKR 213
>gi|83643344|ref|YP_431779.1| RNA-binding protein [Hahella chejuensis KCTC 2396]
gi|83631387|gb|ABC27354.1| RNA-binding protein (RRM domain) [Hahella chejuensis KCTC 2396]
Length = 92
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 50/82 (60%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++V LS T++ L+EAFA +G + +I DR TG+SKGFGFV + +AE A + +
Sbjct: 3 IYVGNLSYQVTEDDLREAFAAYGDISNVNIIRDRDTGQSKGFGFVEMSDNGQAEEAIQKL 62
Query: 96 NAKYLDGWVIFVDPAKSREARP 117
N L G + V+ A+ RE +P
Sbjct: 63 NESNLKGRNMKVNEARPREEKP 84
>gi|387762942|ref|NP_001248687.1| TIA1 cytotoxic granule-associated RNA binding protein [Macaca
mulatta]
gi|84579193|dbj|BAE73030.1| hypothetical protein [Macaca fascicularis]
gi|355565763|gb|EHH22192.1| hypothetical protein EGK_05415 [Macaca mulatta]
gi|355751389|gb|EHH55644.1| hypothetical protein EGM_04890 [Macaca fascicularis]
gi|380816026|gb|AFE79887.1| nucleolysin TIA-1 isoform p40 isoform 2 [Macaca mulatta]
gi|383421173|gb|AFH33800.1| nucleolysin TIA-1 isoform p40 isoform 2 [Macaca mulatta]
gi|384949108|gb|AFI38159.1| nucleolysin TIA-1 isoform p40 isoform 2 [Macaca mulatta]
Length = 386
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS T E +K AFAPFG++ ++V+ D ATG+SKG+GFVS+ + +AE A +
Sbjct: 107 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 166
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPP 121
M ++L G I + A R PP P
Sbjct: 167 MGGQWLGGRQIRTNWA----TRKPPAP 189
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 39/70 (55%), Gaps = 6/70 (8%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++ G++ T++ +++ F+PFGQ++ +V D KG+ FV + S E A A +
Sbjct: 216 VYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSV 269
Query: 96 NAKYLDGWVI 105
N ++G V+
Sbjct: 270 NGTTIEGHVV 279
>gi|390474361|ref|XP_003734771.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Callithrix jacchus]
gi|403260486|ref|XP_003922702.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 386
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS T E +K AFAPFG++ ++V+ D ATG+SKG+GFVS+ + +AE A +
Sbjct: 107 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 166
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPP 121
M ++L G I + A R PP P
Sbjct: 167 MGGQWLGGRQIRTNWA----TRKPPAP 189
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 49/98 (50%), Gaps = 11/98 (11%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++ G++ T++ +++ F+PFGQ++ +V D KG+ FV + S E A A +
Sbjct: 216 VYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSV 269
Query: 96 NAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
N ++G V+ K + P QQ S++G+
Sbjct: 270 NGTTIEGHVV-----KCYWGKETLDMINPVQQQSQIGY 302
>gi|291386623|ref|XP_002709696.1| PREDICTED: TIA1 cytotoxic granule-associated RNA binding
protein-like [Oryctolagus cuniculus]
Length = 386
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS T E +K AFAPFG++ ++V+ D ATG+SKG+GFVS+ + +AE A +
Sbjct: 107 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 166
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPP 121
M ++L G I + A R PP P
Sbjct: 167 MGGQWLGGRQIRTNWA----TRKPPAP 189
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 53/105 (50%), Gaps = 11/105 (10%)
Query: 29 STLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEA 88
S+ ++ ++ G++ T++ +++ F+PFGQ++ +V D KG+ FV + S E A
Sbjct: 209 SSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESA 262
Query: 89 ERAREGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
A +N ++G V+ K + P QQ +++G+
Sbjct: 263 AHAIVSVNGTTIEGHVV-----KCYWGKETLDMINPVQQQNQIGY 302
>gi|281346697|gb|EFB22281.1| hypothetical protein PANDA_002889 [Ailuropoda melanoleuca]
Length = 377
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS T E +K AFAPFG++ ++V+ D ATG+SKG+GFVS+ + +AE A +
Sbjct: 98 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 157
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPP 121
M ++L G I + A R PP P
Sbjct: 158 MGGQWLGGRQIRTNWA----TRKPPAP 180
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 29 STLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEA 88
S+ ++ ++ G++ T++ +++ F+PFGQ++ +V D KG+ FV + S E A
Sbjct: 200 SSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESA 253
Query: 89 ERAREGMNAKYLDGWVI 105
A +N ++G V+
Sbjct: 254 AHAIVSVNGTTIEGHVV 270
>gi|395507384|ref|XP_003758005.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Sarcophilus harrisii]
Length = 394
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS T E +K AFAPFG++ ++V+ D ATG+SKG+GFVS+ + +AE A +
Sbjct: 106 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 165
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPP 121
M ++L G I + A R PP P
Sbjct: 166 MGGQWLGGRQIRTNWA----TRKPPAP 188
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 49/98 (50%), Gaps = 11/98 (11%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++ G++ T++ +++ F+PFGQ++ +V D KG+ FV + S E A A +
Sbjct: 215 VYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSV 268
Query: 96 NAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
N ++G V+ K + P QQ +++G+
Sbjct: 269 NGTTIEGHVV-----KCYWGKETLDMLNPVQQQNQIGY 301
>gi|345864924|ref|ZP_08817119.1| RNP-1 like RNA-binding protein [endosymbiont of Tevnia jerichonana
(vent Tica)]
gi|345124004|gb|EGW53889.1| RNP-1 like RNA-binding protein [endosymbiont of Tevnia jerichonana
(vent Tica)]
Length = 91
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 49/78 (62%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++V LS TTD++L E FAP+G + +KVI DR TGRS+GFGFV + A+ A + +
Sbjct: 3 IYVGNLSWNTTDDELHELFAPYGAVDSAKVIMDRETGRSRGFGFVEMSDNSAAQSAIDSL 62
Query: 96 NAKYLDGWVIFVDPAKSR 113
N L G + V+ AK R
Sbjct: 63 NDSQLGGRSLRVNEAKPR 80
>gi|380748929|ref|NP_001244132.1| nucleolysin TIAR isoform 2 [Gallus gallus]
gi|28883273|gb|AAO49720.1| TIA-1 [Gallus gallus]
Length = 372
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS T E +K AFAPFG++ ++V+ D ATG+SKG+GFVS+ + +AE A +
Sbjct: 96 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 155
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPP 121
M ++L G I + A R PP P
Sbjct: 156 MGGQWLGGRQIRTNWA----TRKPPAP 178
Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 54/105 (51%), Gaps = 12/105 (11%)
Query: 29 STLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEA 88
S+ ++ ++ G++ T++ +++ F+PFGQ++ +V D KG+ FV + S E A
Sbjct: 198 SSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESA 251
Query: 89 ERAREGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
A +N ++G V+ K + P P QQ +++G+
Sbjct: 252 AHAIVSVNGTTIEGHVV-----KCYWGKETPDMISPVQQ-NQIGY 290
>gi|119620231|gb|EAW99825.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_c [Homo sapiens]
Length = 144
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS T E +K AFAPFG++ ++V+ D ATG+SKG+GFVS+ + +AE A +
Sbjct: 31 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 90
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPP 121
M ++L G I + A R PP P
Sbjct: 91 MGGQWLGGRQIRTNWA----TRKPPAP 113
>gi|326936530|ref|XP_003214306.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Meleagris gallopavo]
Length = 423
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS T E +K AFAPFG++ ++V+ D ATG+SKG+GFVS+ + +AE A +
Sbjct: 147 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 206
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPP 121
M ++L G I + A R PP P
Sbjct: 207 MGGQWLGGRQIRTNWA----TRKPPAP 229
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 50/98 (51%), Gaps = 12/98 (12%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++ G++ T++ +++ F+PFGQ++ +V D KG+ FV + S E A A +
Sbjct: 256 VYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSV 309
Query: 96 NAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
N ++G V+ K + P P QQ +++G+
Sbjct: 310 NGTTIEGHVV-----KCYWGKETPDMVSPVQQ-NQIGY 341
>gi|62088002|dbj|BAD92448.1| TIA1 protein variant [Homo sapiens]
Length = 464
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS T E +K AFAPFG++ ++V+ D ATG+SKG+GFVS+ + +AE A +
Sbjct: 145 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 204
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPP 121
M ++L G I + A R PP P
Sbjct: 205 MGGQWLGGRQIRTNWA----TRKPPAP 227
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 57/121 (47%), Gaps = 21/121 (17%)
Query: 15 SSILKSQLGSIRYNSTL-----TSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDR 69
++I KS + Y+ + ++ ++ G++ T++ +++ F+PFGQ++ +V D
Sbjct: 269 TTIQKSNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD- 327
Query: 70 ATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVI----------FVDPAKSREARPPP 119
KG+ FV + S E A A +N ++G V+ ++P + + P
Sbjct: 328 -----KGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQNQIGYPQ 382
Query: 120 P 120
P
Sbjct: 383 P 383
>gi|330847369|gb|AEC46650.1| cold inducible RNA binding protein transcript variant 2 [Sus
scrofa]
Length = 182
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 50/76 (65%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T ++ L++ F+ +GQ+ V+ DR T RS+ FGFV++ +I++A+ A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRDFGFVTFENIDDAKDAMMA 66
Query: 95 MNAKYLDGWVIFVDPA 110
MN K +DG I VD A
Sbjct: 67 MNGKSVDGRQIRVDQA 82
>gi|188219591|ref|NP_071505.2| nucleolysin TIA-1 isoform p40 isoform 2 [Homo sapiens]
gi|114577930|ref|XP_001141557.1| PREDICTED: uncharacterized protein LOC459303 isoform 2 [Pan
troglodytes]
gi|397521824|ref|XP_003830986.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Pan paniscus]
gi|206729905|sp|P31483.3|TIA1_HUMAN RecName: Full=Nucleolysin TIA-1 isoform p40; AltName:
Full=RNA-binding protein TIA-1; AltName:
Full=T-cell-restricted intracellular antigen-1;
Short=TIA-1; AltName: Full=p40-TIA-1
gi|62702267|gb|AAX93193.1| unknown [Homo sapiens]
gi|119620230|gb|EAW99824.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_b [Homo sapiens]
gi|261861076|dbj|BAI47060.1| TIA1 cytotoxic granule-associated RNA binding protein [synthetic
construct]
gi|410226260|gb|JAA10349.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410254978|gb|JAA15456.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410298556|gb|JAA27878.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410353839|gb|JAA43523.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
Length = 386
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS T E +K AFAPFG++ ++V+ D ATG+SKG+GFVS+ + +AE A +
Sbjct: 107 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 166
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPP 121
M ++L G I + A R PP P
Sbjct: 167 MGGQWLGGRQIRTNWA----TRKPPAP 189
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 39/70 (55%), Gaps = 6/70 (8%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++ G++ T++ +++ F+PFGQ++ +V D KG+ FV + S E A A +
Sbjct: 216 VYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSV 269
Query: 96 NAKYLDGWVI 105
N ++G V+
Sbjct: 270 NGTTIEGHVV 279
>gi|84579137|dbj|BAE73002.1| hypothetical protein [Macaca fascicularis]
Length = 385
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS T E +K AFAPFG++ ++V+ D ATG+SKG+GFVS+ + +AE A +
Sbjct: 107 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 166
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPP 121
M ++L G I + A R PP P
Sbjct: 167 MGGQWLGGRQIRTNWA----TRKPPAP 189
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 16/95 (16%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++ G++ T++ +++ F+PFGQ++ +V D KG+ FV + S E A A +
Sbjct: 216 VYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSV 269
Query: 96 NAKYLDGWVI----------FVDPAKSREARPPPP 120
N ++G V+ ++P + + P P
Sbjct: 270 NGTTIEGHVVKCYWGKETLDMINPVQQNQIGYPQP 304
>gi|440793266|gb|ELR14453.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 273
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V+GL+ T + L+ F+ FG++V + ++ D TG S+GF FV+ S EA+ A EG
Sbjct: 103 LYVTGLASRTREADLERKFSKFGEVVKAHLVCDPRTGDSRGFAFVTMGSDTEAQDAMEGG 162
Query: 96 NAKYLDGWVIFVDPAKSREARPPPPPP 122
N LDG +I V+ KS+ ARP P P
Sbjct: 163 NRTELDGRIISVE--KSKRARPRSPTP 187
>gi|395731713|ref|XP_002811971.2| PREDICTED: LOW QUALITY PROTEIN: nucleolysin TIA-1 isoform p40
[Pongo abelii]
Length = 386
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS T E +K AFAPFG++ ++V+ D ATG+SKG+GFVS+ + +AE A +
Sbjct: 107 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 166
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPP 121
M ++L G I + A R PP P
Sbjct: 167 MGGQWLGGRQIRTNWA----TRKPPAP 189
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 29 STLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEA 88
S+ ++ ++ G++ T++ +++ F+PFGQ++ +V D KG+ FV + S E A
Sbjct: 209 SSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESA 262
Query: 89 ERAREGMNAKYLDGWVI 105
A +N ++G V+
Sbjct: 263 AHAIVSVNGTTIEGHVV 279
>gi|340055699|emb|CCC50020.1| putative RNA-binding protein [Trypanosoma vivax Y486]
Length = 590
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 6/99 (6%)
Query: 19 KSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFG 78
K +L S + + S LFVSGL + TD++L E FAPFG++ +KV+ + TG+S+G
Sbjct: 252 KRELDSQELDDEMRS-NLFVSGLHQHVTDKQLHELFAPFGEIQSAKVMLNINTGKSRGIA 310
Query: 79 FVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREARP 117
FV + + +AE+A E +N +F + R A+P
Sbjct: 311 FVKFAKVGDAEKAMEALN-----NTSVFEETINVRVAKP 344
>gi|410298560|gb|JAA27880.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
Length = 388
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS T E +K AFAPFG++ ++V+ D ATG+SKG+GFVS+ + +AE A +
Sbjct: 109 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 168
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPP 121
M ++L G I + A R PP P
Sbjct: 169 MGGQWLGGRQIRTNWA----TRKPPAP 191
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 39/70 (55%), Gaps = 6/70 (8%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++ G++ T++ +++ F+PFGQ++ +V D KG+ FV + S E A A +
Sbjct: 218 VYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSV 271
Query: 96 NAKYLDGWVI 105
N ++G V+
Sbjct: 272 NGTTIEGHVV 281
>gi|351714346|gb|EHB17265.1| Nucleolysin TIA-1 isoform p40 [Heterocephalus glaber]
Length = 386
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS T E +K AFAPFG++ ++V+ D ATG+SKG+GFVS+ + +AE A +
Sbjct: 107 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 166
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPP 121
M ++L G I + A R PP P
Sbjct: 167 MGGQWLGGRQIRTNWA----TRKPPAP 189
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 39/70 (55%), Gaps = 6/70 (8%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++ G++ T++ +++ F+PFGQ++ +V D KG+ FV + S E A A +
Sbjct: 216 VYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSV 269
Query: 96 NAKYLDGWVI 105
N ++G V+
Sbjct: 270 NGTTIEGHVV 279
>gi|326933139|ref|XP_003212666.1| PREDICTED: polyadenylate-binding protein 4-like [Meleagris
gallopavo]
Length = 636
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DE+LKE F+ +G+ + KV+TD TG+SKGFGFVS+ E+A +A E M
Sbjct: 199 VYIKNFGDDMDDERLKELFSKYGKTLSVKVMTD-PTGKSKGFGFVSFEKHEDANKAVEEM 257
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K ++G ++FV A+ + R
Sbjct: 258 NGKDINGKMVFVGRAQKKVER 278
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L++ L DEKL++ F+PFG + +KV+ + GRSKGFGFV ++S EEA +A M
Sbjct: 302 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEM 359
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N + + ++V A+ +E R
Sbjct: 360 NGRIVGSKPLYVALAQRKEER 380
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L + F+ FG ++ KV+ D SKG+ FV + + + A+RA E M
Sbjct: 107 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQDAADRAIEKM 164
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N L+ +FV KSR+ R
Sbjct: 165 NGMLLNDRKVFVGRFKSRKER 185
>gi|159164100|pdb|2DH7|A Chain A, Solution Structure Of The Second Rna Binding Domain In
Nucleolysin Tiar
Length = 105
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS T E +K AFAPFG++ ++V+ D ATG+SKG+GFVS+ + +AE A
Sbjct: 17 HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVH 76
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPPPYP 124
M ++L G I + A R PP P P
Sbjct: 77 MGGQWLGGRQIRTNWA----TRKPPAPSGP 102
>gi|45201218|ref|NP_986788.1| AGR122Cp [Ashbya gossypii ATCC 10895]
gi|74691820|sp|Q74ZS6.1|PABP_ASHGO RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|44986072|gb|AAS54612.1| AGR122Cp [Ashbya gossypii ATCC 10895]
gi|374110037|gb|AEY98942.1| FAGR122Cp [Ashbya gossypii FDAG1]
Length = 585
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
LFV L DEKLKE FAPFG + +KV+ D TG S+GFGFV +++ EEA +A
Sbjct: 324 LFVKNLDDSIDDEKLKEEFAPFGTITSAKVMRDE-TGNSRGFGFVCFSTPEEATKAITEK 382
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N + + G ++V A+ +E R
Sbjct: 383 NQQIVAGKPLYVAIAQRKEVR 403
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S +++ L ++ L E F+ FG ++ KV TD G S+GFGFV + + +A A
Sbjct: 125 SGNIYIKNLHPAIDNKSLHETFSTFGNILSCKVATDE-NGVSRGFGFVHFENESDARDAI 183
Query: 93 EGMNAKYLDGWVIFVDPAKSREAR 116
E ++ ++ ++V S++ R
Sbjct: 184 EAVDGMLMNDQEVYVALHVSKKDR 207
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++V + + T+ E+ +E F +G++ S V+ + G+ +GFGFV++ A +A + +
Sbjct: 221 VYVKNIDQETSQEEFEELFGKYGKIT-SAVLEKDSEGKLRGFGFVNFEDHAAAAKAVDEL 279
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N G ++V A+ + R
Sbjct: 280 NELEFKGQKLYVGRAQKKYER 300
>gi|336272443|ref|XP_003350978.1| hypothetical protein SMAC_04282 [Sordaria macrospora k-hell]
gi|380090745|emb|CCC04915.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 192
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 46/79 (58%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS T D L+ F FG + + V+ DR TGRS+GFGFV Y + +AE A
Sbjct: 3 KLFVGGLSWNTDDNMLRAKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYANDADAENAIAN 62
Query: 95 MNAKYLDGWVIFVDPAKSR 113
M+ + DG + VD A R
Sbjct: 63 MDGQEFDGRRVRVDKASDR 81
>gi|296223620|ref|XP_002757701.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Callithrix
jacchus]
gi|403260488|ref|XP_003922703.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 375
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS T E +K AFAPFG++ ++V+ D ATG+SKG+GFVS+ + +AE A +
Sbjct: 96 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 155
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPP 121
M ++L G I + A R PP P
Sbjct: 156 MGGQWLGGRQIRTNWA----TRKPPAP 178
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 53/105 (50%), Gaps = 11/105 (10%)
Query: 29 STLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEA 88
S+ ++ ++ G++ T++ +++ F+PFGQ++ +V D KG+ FV + S E A
Sbjct: 198 SSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESA 251
Query: 89 ERAREGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
A +N ++G V+ K + P QQ S++G+
Sbjct: 252 AHAIVSVNGTTIEGHVV-----KCYWGKETLDMINPVQQQSQIGY 291
>gi|380816028|gb|AFE79888.1| nucleolysin TIA-1 isoform p40 isoform 1 [Macaca mulatta]
gi|383421175|gb|AFH33801.1| nucleolysin TIA-1 isoform p40 isoform 1 [Macaca mulatta]
Length = 375
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS T E +K AFAPFG++ ++V+ D ATG+SKG+GFVS+ + +AE A +
Sbjct: 96 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 155
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPP 121
M ++L G I + A R PP P
Sbjct: 156 MGGQWLGGRQIRTNWA----TRKPPAP 178
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 29 STLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEA 88
S+ ++ ++ G++ T++ +++ F+PFGQ++ +V D KG+ FV + S E A
Sbjct: 198 SSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESA 251
Query: 89 ERAREGMNAKYLDGWVI 105
A +N ++G V+
Sbjct: 252 AHAIVSVNGTTIEGHVV 268
>gi|159164088|pdb|2DGO|A Chain A, Solution Structure Of The Rna Binding Domain In Cytotoxic
Granule-Associated Rna Binding Protein 1
gi|211938969|pdb|2RNE|A Chain A, Solution Structure Of The Second Rna Recognition Motif
(Rrm) Of Tia-1
Length = 115
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS T E +K AFAPFG++ ++V+ D ATG+SKG+GFVS+ + +AE A +
Sbjct: 17 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 76
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPP 121
M ++L G I + A R PP P
Sbjct: 77 MGGQWLGGRQIRTNWA----TRKPPAP 99
>gi|432875366|ref|XP_004072806.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oryzias latipes]
Length = 386
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS T E +K AFAPFG++ ++V+ D ATG+SKG+GFVS+ + +AE A +
Sbjct: 96 HVFVGDLSPEITTEDVKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQH 155
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPP 121
M ++L G I + A R PP P
Sbjct: 156 MGGQWLGGRQIRTNWA----TRKPPAP 178
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 29 STLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEA 88
S+ ++ ++ G+S T++ +++ F+ FGQ++ +V D KG+ FV + S E A
Sbjct: 198 SSPSNCTVYCGGVSSGLTEQLMRQTFSAFGQIMEVRVFPD------KGYSFVRFNSHESA 251
Query: 89 ERAREGMNAKYLDGWVI 105
A +N +DG V+
Sbjct: 252 AHAIVSVNGTSIDGHVV 268
>gi|426215230|ref|XP_004001877.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Ovis aries]
Length = 631
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DE LKE F+ FG+ + KV+ D +G+SKGFGFVSY E+A +A E M
Sbjct: 193 VYIKNFGEEVDDENLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K + G VIFV A+ + R
Sbjct: 252 NGKEITGKVIFVGRAQKKVER 272
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L++ L DEKL++ F+PFG + +KV+ + GRSKGFGFV ++S EEA +A M
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N + + ++V A+ +E R
Sbjct: 354 NGRIVGSKPLYVALAQRKEER 374
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L + F+ FG ++ KV+ D SKG+ FV + + E A++A E M
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKM 158
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N L+ +FV KSR+ R
Sbjct: 159 NGMLLNDRKVFVGRFKSRKER 179
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V L T+ L E F+P G ++ +V D T RS G+ +V++ +AERA + M
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 96 NAKYLDGWVIFV 107
N + G I +
Sbjct: 73 NFDVIKGKPIRI 84
>gi|345569077|gb|EGX51946.1| hypothetical protein AOL_s00043g680 [Arthrobotrys oligospora ATCC
24927]
Length = 150
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 46/76 (60%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GL+ T D+ L+ F FGQ+ + V+ DR TGRS+GFGFV +T+ +A A
Sbjct: 3 KLFVGGLAWHTDDQTLRTKFEEFGQVEEAVVVKDRDTGRSRGFGFVRFTNEADATTAMNA 62
Query: 95 MNAKYLDGWVIFVDPA 110
MN DG I VD A
Sbjct: 63 MNNTEFDGRYIRVDKA 78
>gi|255731137|ref|XP_002550493.1| polyadenylate-binding protein [Candida tropicalis MYA-3404]
gi|240132450|gb|EER32008.1| polyadenylate-binding protein [Candida tropicalis MYA-3404]
Length = 633
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 18 LKSQLGSIRYN--STLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSK 75
LK Q +IR + LFV L EKL+E F PFG + +KV+ D A G+SK
Sbjct: 315 LKKQYEAIRLEKLAKYQGVNLFVKNLDDSIDSEKLEEEFKPFGTITSAKVMVDDA-GKSK 373
Query: 76 GFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREAR 116
GFGFV +T+ EEA +A MN + ++ ++V A+ ++ R
Sbjct: 374 GFGFVCFTTPEEATKAITEMNQRMVNNKPLYVALAQRKDVR 414
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++V + T+E+ ++ FAP+G++ + D+ G+SKGFGFV++ + A +A E +
Sbjct: 232 IYVKNIDLAYTEEEFEKLFAPYGKITSIYLEKDQ-DGKSKGFGFVNFEEHDAAVKAVEEL 290
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K ++G I+V A+ + R
Sbjct: 291 NDKEINGQKIYVGRAQKKRER 311
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L ++ L + F+ FG+++ KV TD G+SK FGFV Y + E AE A E +
Sbjct: 139 IFIKNLHPAIDNKALHDTFSAFGKILSCKVATDE-LGQSKCFGFVHYETAEAAEAAIENV 197
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N L+ +FV S++ R
Sbjct: 198 NGMLLNDREVFVGKHISKKDR 218
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 32 TSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERA 91
S L+V L+ + L E F+P GQ+ +V D + +S G+ +V+Y E+ E+A
Sbjct: 47 NSASLYVGELNPSVNEATLFEIFSPIGQVSSIRVCRDAVSKKSLGYAYVNYHKFEDGEKA 106
Query: 92 REGMNAKYLDG 102
E +N ++G
Sbjct: 107 IEELNYTPIEG 117
>gi|157870247|ref|XP_001683674.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68126740|emb|CAJ05119.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 692
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 4 ASSFRRALSSGSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYS 63
++S +A SSG + Q + S LFV GL D++L E F G++ +
Sbjct: 205 STSLSQATSSGIATSSGQPNDVEVRS-----NLFVCGLPVSVRDKELLELFEKHGEIESA 259
Query: 64 KVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREA 115
KV+ D TGRS+G FV + ++E AE A + +N ++G I V A SR A
Sbjct: 260 KVMLDIHTGRSRGIAFVKFKNVEHAENAVDALNGTTVNGHQITVRVANSRAA 311
>gi|139948570|ref|NP_001077193.1| polyadenylate-binding protein 4 [Bos taurus]
gi|134024563|gb|AAI34510.1| PABPC4 protein [Bos taurus]
gi|296488909|tpg|DAA31022.1| TPA: poly A binding protein, cytoplasmic 4 [Bos taurus]
Length = 645
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DE LKE F+ FG+ + KV+ D +G+SKGFGFVSY E+A +A E M
Sbjct: 193 VYIKNFGEEVDDENLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K + G VIFV A+ + R
Sbjct: 252 NGKEITGKVIFVGRAQKKVER 272
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L++ L DEKL++ F+PFG + +KV+ + GRSKGFGFV ++S EEA +A M
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N + + ++V A+ +E R
Sbjct: 354 NGRIVGSKPLYVALAQRKEER 374
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L + F+ FG ++ KV+ D SKG+ FV + + E A++A E M
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKM 158
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N L+ +FV KSR+ R
Sbjct: 159 NGMLLNDRKVFVGRFKSRKER 179
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V L T+ L E F+P G ++ +V D T RS G+ +V++ +AERA + M
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 96 NAKYLDGWVIFV 107
N + G I +
Sbjct: 73 NFDVIKGKPIRI 84
>gi|426215228|ref|XP_004001876.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Ovis aries]
Length = 644
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DE LKE F+ FG+ + KV+ D +G+SKGFGFVSY E+A +A E M
Sbjct: 193 VYIKNFGEEVDDENLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K + G VIFV A+ + R
Sbjct: 252 NGKEITGKVIFVGRAQKKVER 272
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L++ L DEKL++ F+PFG + +KV+ + GRSKGFGFV ++S EEA +A M
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N + + ++V A+ +E R
Sbjct: 354 NGRIVGSKPLYVALAQRKEER 374
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L + F+ FG ++ KV+ D SKG+ FV + + E A++A E M
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKM 158
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N L+ +FV KSR+ R
Sbjct: 159 NGMLLNDRKVFVGRFKSRKER 179
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V L T+ L E F+P G ++ +V D T RS G+ +V++ +AERA + M
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 96 NAKYLDGWVIFV 107
N + G I +
Sbjct: 73 NFDVIKGKPIRI 84
>gi|73969892|ref|XP_866571.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 9 [Canis lupus
familiaris]
gi|301758208|ref|XP_002914947.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 1 [Ailuropoda
melanoleuca]
gi|410954995|ref|XP_003984144.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Felis catus]
gi|431912606|gb|ELK14624.1| Nucleolysin TIA-1 isoform p40 [Pteropus alecto]
Length = 386
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS T E +K AFAPFG++ ++V+ D ATG+SKG+GFVS+ + +AE A +
Sbjct: 107 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 166
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPP 121
M ++L G I + A R PP P
Sbjct: 167 MGGQWLGGRQIRTNWA----TRKPPAP 189
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 29 STLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEA 88
S+ ++ ++ G++ T++ +++ F+PFGQ++ +V D KG+ FV + S E A
Sbjct: 209 SSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESA 262
Query: 89 ERAREGMNAKYLDGWVI 105
A +N ++G V+
Sbjct: 263 AHAIVSVNGTTIEGHVV 279
>gi|294892363|ref|XP_002774026.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239879230|gb|EER05842.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 636
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 49/84 (58%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S L+V L DEKL++ F FG++ KV+ D TG S+GFGFV + + + E+A
Sbjct: 338 SCNLYVKNLPEDVDDEKLRQMFEQFGEITSPKVMVDENTGVSRGFGFVCFANQADGEKAI 397
Query: 93 EGMNAKYLDGWVIFVDPAKSREAR 116
+ M+ K G +FV A+ R+AR
Sbjct: 398 QAMHLKLYGGKPLFVAVAEKRDAR 421
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+FV L + ++ L + F+ FG ++ KV TD G+S+G+GFV + + E A +A +
Sbjct: 124 VFVKNLDKTIDNKALYDTFSLFGNILSCKVATD-DDGKSRGYGFVHFENDESAHKAITKL 182
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N + ++V P + R
Sbjct: 183 NGMMIGEKAVYVGPFQKHAER 203
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 45 TTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYL 100
TT+E +++AF FG++ + TDR + + F FV+Y + A +A E MN K +
Sbjct: 227 TTEEDVQKAFEEFGKITSVAIQTDR---KGRRFAFVNYEDFDSAAKAVEAMNGKDM 279
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V L T+ L E F G + +V D T RS G+ +V++ ++ +AERA + +
Sbjct: 36 LYVGDLKPDVTEAMLYEVFNGVGPVASIRVCRDSVTRRSLGYAYVNFHNVADAERALDTL 95
Query: 96 N 96
N
Sbjct: 96 N 96
>gi|344304706|gb|EGW34938.1| hypothetical protein SPAPADRAFT_58066 [Spathaspora passalidarum
NRRL Y-27907]
Length = 508
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Query: 18 LKSQLGSIRYN--STLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSK 75
LK Q S R S LFV L EKL+E F PFG + +KV+ D A G+SK
Sbjct: 193 LKKQYESTRVERLSKYQGVNLFVKNLDDSIDSEKLEEEFKPFGSITSAKVMVDEA-GKSK 251
Query: 76 GFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREAR 116
GFGFV ++S EEA +A MN + + G ++V A+ ++ R
Sbjct: 252 GFGFVCFSSPEEATKAITEMNQRMILGKPLYVALAQRKDVR 292
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++V + +DE+ ++ F PFG + + D+ G+SKGFGFV+Y + E A +A E +
Sbjct: 110 IYVKNIDLEFSDEEFEKLFVPFGTITSIYLEKDQ-DGKSKGFGFVNYETHESAVKAVEEL 168
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K ++G I+V A+ + R
Sbjct: 169 NDKEINGQKIYVGRAQKKRER 189
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L ++ L + F+ FG+++ KV TD G+SK FGFV Y + E AE A E +
Sbjct: 17 IFIKNLHPAIDNKALHDTFSAFGKILSCKVATD-DMGQSKCFGFVHYETAEAAEAAIENV 75
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N L+ ++V S++ R
Sbjct: 76 NGMLLNDREVYVGKHISKKDR 96
>gi|344283907|ref|XP_003413712.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Loxodonta
africana]
Length = 386
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS T E +K AFAPFG++ ++V+ D ATG+SKG+GFVS+ + +AE A +
Sbjct: 107 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 166
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPP 121
M ++L G I + A R PP P
Sbjct: 167 MGGQWLGGRQIRTNWA----TRKPPAP 189
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 29 STLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEA 88
S+ ++ ++ G++ T++ +++ F+PFGQ++ +V D KG+ FV + S E A
Sbjct: 209 SSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESA 262
Query: 89 ERAREGMNAKYLDGWVI 105
A +N ++G V+
Sbjct: 263 AHAIVSVNGTTIEGHVV 279
>gi|188219593|ref|NP_071320.2| nucleolysin TIA-1 isoform p40 isoform 1 [Homo sapiens]
gi|114577932|ref|XP_001141475.1| PREDICTED: uncharacterized protein LOC459303 isoform 1 [Pan
troglodytes]
gi|397521826|ref|XP_003830987.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Pan paniscus]
gi|119620229|gb|EAW99823.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_a [Homo sapiens]
gi|410254976|gb|JAA15455.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410298558|gb|JAA27879.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410353837|gb|JAA43522.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
Length = 375
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS T E +K AFAPFG++ ++V+ D ATG+SKG+GFVS+ + +AE A +
Sbjct: 96 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 155
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPP 121
M ++L G I + A R PP P
Sbjct: 156 MGGQWLGGRQIRTNWA----TRKPPAP 178
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 29 STLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEA 88
S+ ++ ++ G++ T++ +++ F+PFGQ++ +V D KG+ FV + S E A
Sbjct: 198 SSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESA 251
Query: 89 ERAREGMNAKYLDGWVI 105
A +N ++G V+
Sbjct: 252 AHAIVSVNGTTIEGHVV 268
>gi|218199217|gb|EEC81644.1| hypothetical protein OsI_25179 [Oryza sativa Indica Group]
Length = 343
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 53/79 (67%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R+FV GLS TT+ L+ AF+ +G+++ ++V+ +R TGRS+GFGFV+++ + A G
Sbjct: 8 RIFVGGLSWDTTERTLERAFSEYGKVIETQVVLERDTGRSRGFGFVTFSEPRAVDAAIRG 67
Query: 95 MNAKYLDGWVIFVDPAKSR 113
M+ LDG I V+ A+ R
Sbjct: 68 MHNGELDGRTISVNKAQPR 86
>gi|168051480|ref|XP_001778182.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670395|gb|EDQ56964.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 172
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 55/88 (62%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V+GLS ++ L+E F+ G+++ +++ D T S+GFGFV+ +E+AER + +
Sbjct: 15 LYVTGLSTRVNEKDLQEHFSREGKVLECRLVLDPRTRESRGFGFVTMEHLEDAERCIKYL 74
Query: 96 NAKYLDGWVIFVDPAKSREARPPPPPPY 123
N L+G +I V+ AK + AR P P Y
Sbjct: 75 NRSTLEGRMITVEKAKRKRARTPTPGEY 102
>gi|301758210|ref|XP_002914948.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 2 [Ailuropoda
melanoleuca]
gi|410954993|ref|XP_003984143.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Felis catus]
Length = 375
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS T E +K AFAPFG++ ++V+ D ATG+SKG+GFVS+ + +AE A +
Sbjct: 96 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 155
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPP 121
M ++L G I + A R PP P
Sbjct: 156 MGGQWLGGRQIRTNWA----TRKPPAP 178
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 29 STLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEA 88
S+ ++ ++ G++ T++ +++ F+PFGQ++ +V D KG+ FV + S E A
Sbjct: 198 SSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESA 251
Query: 89 ERAREGMNAKYLDGWVI 105
A +N ++G V+
Sbjct: 252 AHAIVSVNGTTIEGHVV 268
>gi|344287655|ref|XP_003415568.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Loxodonta
africana]
Length = 631
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DE LKE F+ FG+ + KV+ D +G+SKGFGFVSY E+A +A E M
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K + G VIFV A+ + R
Sbjct: 252 NGKEISGKVIFVGRAQKKVER 272
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L++ L DEKL++ F+PFG + +KV+ + GRSKGFGFV ++S EEA +A M
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N + + ++V A+ +E R
Sbjct: 354 NGRIVGSKPLYVALAQRKEER 374
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L + F+ FG ++ KV+ D SKG+ FV + + E A++A E M
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKM 158
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N L+ +FV KSR+ R
Sbjct: 159 NGMLLNDRKVFVGRFKSRKER 179
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V L T+ L E F+P G ++ +V D T RS G+ +V++ +AERA + M
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 96 NAKYLDGWVIFV 107
N + G I +
Sbjct: 73 NFDVIKGKPIRI 84
>gi|452824419|gb|EME31422.1| glycine-rich RNA binding protein isoform 1 [Galdieria sulphuraria]
Length = 148
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
R+FV GL ++E LK+ F+ +G++V ++V+ DR TGRS+GFGF+SY +
Sbjct: 4 DNRVFVGGLPWSISEEDLKQVFSKYGEVVDARVVIDRETGRSRGFGFISYAESSSVDECI 63
Query: 93 EGMNAKYLDGWVIFVDPAKSREARPPP 119
++ + L G I V+ A +RE R
Sbjct: 64 AALDGQDLQGRTIRVNKAMTREQRDDE 90
>gi|344250807|gb|EGW06911.1| Nucleolysin TIA-1 [Cricetulus griseus]
Length = 387
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS T E +K AFAPFG++ ++V+ D ATG+SKG+GFVS+ + +AE A +
Sbjct: 107 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 166
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPP 121
M ++L G I + A R PP P
Sbjct: 167 MGGQWLGGRQIRTNWA----TRKPPAP 189
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 49/98 (50%), Gaps = 16/98 (16%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++ G++ T++ +++ F+PFGQ++ +V D KG+ F+ + S E A A +
Sbjct: 216 VYCGGVTSGLTEQLMRQTFSPFGQILEIRVFPD------KGYSFIRFNSHESAAHAIVSV 269
Query: 96 NAKYLDGWVI----------FVDPAKSREARPPPPPPY 123
N ++G V+ ++P + ++ + PP Y
Sbjct: 270 NGTTIEGHVVKCYWGKETLDMINPVQQQQNQIGYPPAY 307
>gi|6755783|ref|NP_035715.1| nucleolysin TIA-1 isoform 1 [Mus musculus]
gi|1729966|sp|P52912.1|TIA1_MOUSE RecName: Full=Nucleolysin TIA-1; AltName: Full=RNA-binding protein
TIA-1; AltName: Full=T-cell-restricted intracellular
antigen-1; Short=TIA-1
gi|437057|gb|AAA03711.1| TIA [Mus musculus]
gi|1616673|gb|AAC52871.1| RNA binding protein TIA-1 [Mus musculus]
gi|26353510|dbj|BAC40385.1| unnamed protein product [Mus musculus]
gi|74188216|dbj|BAE25782.1| unnamed protein product [Mus musculus]
gi|148666751|gb|EDK99167.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_a
[Mus musculus]
Length = 386
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS T E +K AFAPFG++ ++V+ D ATG+SKG+GFVS+ + +AE A +
Sbjct: 107 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 166
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPP 121
M ++L G I + A R PP P
Sbjct: 167 MGGQWLGGRQIRTNWA----TRKPPAP 189
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++ G++ T++ +++ F+PFGQ++ +V D KG+ FV ++S E A A +
Sbjct: 216 VYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFSSHESAAHAIVSV 269
Query: 96 NAKYLDGWVI 105
N ++G V+
Sbjct: 270 NGTTIEGHVV 279
>gi|195997183|ref|XP_002108460.1| hypothetical protein TRIADDRAFT_51379 [Trichoplax adhaerens]
gi|190589236|gb|EDV29258.1| hypothetical protein TRIADDRAFT_51379 [Trichoplax adhaerens]
Length = 320
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERARE- 93
+LF+ LS TT E L F+ FG+L+ +K+I D TG SKGF FV+Y+S EEA R+
Sbjct: 58 KLFIGNLSWDTTLESLAHYFSSFGKLMDAKIIKDHDTGNSKGFAFVTYSSAEEALHCRKW 117
Query: 94 -GMNAKYLDGWVIFV 107
MN LDG I+V
Sbjct: 118 CAMNYPRLDGRNIYV 132
>gi|26390405|dbj|BAC25892.1| unnamed protein product [Mus musculus]
Length = 358
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS T E +K AFAPFG++ ++V+ D ATG+SKG+GFVS+ + +AE A +
Sbjct: 79 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 138
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPP 121
M ++L G I + A R PP P
Sbjct: 139 MGGQWLGGRQIRTNWA----TRKPPAP 161
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++ G++ T++ +++ F+PFGQ++ +V D KG+ FV ++S E A A +
Sbjct: 188 VYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFSSHESAAHAIVSV 241
Query: 96 NAKYLDGWVI 105
N ++G V+
Sbjct: 242 NGTTIEGHVV 251
>gi|395501989|ref|XP_003755369.1| PREDICTED: nucleolysin TIAR [Sarcophilus harrisii]
Length = 392
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS T E +K AFAPFG++ ++V+ D ATG+SKG+GFVS+ + +AE A
Sbjct: 118 HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVH 177
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGFR 134
M ++L G I + A +PP P E ++ F
Sbjct: 178 MGGQWLGGRQIRTNWATR---KPPAPKSTQENNTKQLRFE 214
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++ G++ TD+ +++ F+PFGQ++ +V + KG+ FV +++ E A A +
Sbjct: 227 VYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSV 280
Query: 96 NAKYLDGWVI 105
N ++G V+
Sbjct: 281 NGTTIEGHVV 290
>gi|372269331|ref|ZP_09505379.1| RNA-binding region RNP-1 (RNA recognition motif) [Alteromonas sp.
S89]
Length = 89
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ L+ T ++L EAF FG++ + VITDR TGRSKGFGFV + +EA +A E M
Sbjct: 3 IYIGNLAYGVTSDELHEAFGAFGEISRATVITDRETGRSKGFGFVEMPNDDEARKAIEEM 62
Query: 96 NAKYLDGWVIFVDPAK 111
N + L G I V+ AK
Sbjct: 63 NDQPLSGRNIRVNEAK 78
>gi|344283909|ref|XP_003413713.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Loxodonta
africana]
Length = 375
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS T E +K AFAPFG++ ++V+ D ATG+SKG+GFVS+ + +AE A +
Sbjct: 96 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 155
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPP 121
M ++L G I + A R PP P
Sbjct: 156 MGGQWLGGRQIRTNWA----TRKPPAP 178
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 29 STLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEA 88
S+ ++ ++ G++ T++ +++ F+PFGQ++ +V D KG+ FV + S E A
Sbjct: 198 SSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESA 251
Query: 89 ERAREGMNAKYLDGWVI 105
A +N ++G V+
Sbjct: 252 AHAIVSVNGTTIEGHVV 268
>gi|426215226|ref|XP_004001875.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Ovis aries]
Length = 660
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DE LKE F+ FG+ + KV+ D +G+SKGFGFVSY E+A +A E M
Sbjct: 193 VYIKNFGEEVDDENLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K + G VIFV A+ + R
Sbjct: 252 NGKEITGKVIFVGRAQKKVER 272
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L++ L DEKL++ F+PFG + +KV+ + GRSKGFGFV ++S EEA +A M
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N + + ++V A+ +E R
Sbjct: 354 NGRIVGSKPLYVALAQRKEER 374
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L + F+ FG ++ KV+ D SKG+ FV + + E A++A E M
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKM 158
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N L+ +FV KSR+ R
Sbjct: 159 NGMLLNDRKVFVGRFKSRKER 179
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V L T+ L E F+P G ++ +V D T RS G+ +V++ +AERA + M
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 96 NAKYLDGWVIFV 107
N + G I +
Sbjct: 73 NFDVIKGKPIRI 84
>gi|400602999|gb|EJP70597.1| cutinase negative acting protein [Beauveria bassiana ARSEF 2860]
Length = 448
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
LF LS D L EAF FG +V ++V+TD+ TGRS+GFG+V + E A +A E M
Sbjct: 205 LFAGSLSWGVDDNALYEAFKSFGNIVSARVVTDKNTGRSRGFGYVDFGDSESATKAYEAM 264
Query: 96 NAKYLDGWVIFVDPAKSR--EARP 117
+ +DG + +D A ++ E +P
Sbjct: 265 QGQEIDGRALNLDYANAKPTEGKP 288
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 26 RYNSTLT--SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYT 83
R+ TL+ S LFV L T + +++ F+ ++ ++ TD +G KGFG+V++
Sbjct: 298 RHGDTLSAESDTLFVGNLPFDTEQDTVRQFFSEVAEVASVRLPTDPDSGNLKGFGYVTFN 357
Query: 84 SIEEAERAREGMN 96
SIE+A+ A + N
Sbjct: 358 SIEDAKSALDAKN 370
>gi|351713677|gb|EHB16596.1| Polyadenylate-binding protein 4 [Heterocephalus glaber]
Length = 661
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DE LKE F+ FG+ + KV+ D +G+SKGFGFVSY E+A +A E M
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K + G VIFV A+ + R
Sbjct: 252 NGKEISGKVIFVGRAQKKVER 272
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L++ L DEKL++ F+PFG + +KV+ + GRSKGFGFV ++S EEA +A M
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N + + ++V A+ +E R
Sbjct: 354 NGRIVGSKPLYVALAQRKEER 374
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L + F+ FG ++ KV+ D SKG+ FV + + E A++A E M
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKM 158
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N L+ +FV KSR+ R
Sbjct: 159 NGMLLNDRKVFVGRFKSRKER 179
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V L T+ L E F+P G ++ +V D T RS G+ +V++ +AERA + M
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 96 NAKYLDGWVIFV 107
N + G I +
Sbjct: 73 NFDVIKGKPIRI 84
>gi|348566571|ref|XP_003469075.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Cavia porcellus]
Length = 388
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS T E +K AFAPFG++ ++V+ D ATG+SKG+GFVS+ + +AE A +
Sbjct: 107 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 166
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPP 121
M ++L G I + A R PP P
Sbjct: 167 MGGQWLGGRQIRTNWA----TRKPPAP 189
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 39/70 (55%), Gaps = 6/70 (8%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++ G++ T++ +++ F+PFGQ++ +V D KG+ FV + S E A A +
Sbjct: 216 VYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSV 269
Query: 96 NAKYLDGWVI 105
N ++G V+
Sbjct: 270 NGTTIEGHVV 279
>gi|300778389|ref|ZP_07088247.1| RNA-binding protein [Chryseobacterium gleum ATCC 35910]
gi|300503899|gb|EFK35039.1| RNA-binding protein [Chryseobacterium gleum ATCC 35910]
Length = 116
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+FVS ++ T + +L + FA FG + +K++TDR TGRS+GFGFV +E ++A E +
Sbjct: 3 IFVSNINYATKEYELHDLFAEFGDVSSAKIVTDRETGRSRGFGFVEMGD-DEGKQAIESL 61
Query: 96 NAKYLDGWVIFVDPAKSREARP 117
N K +G + V AK RE +P
Sbjct: 62 NQKEFNGKTLNVSEAKPREEKP 83
>gi|12230585|sp|Q08937.1|ROC2_NICSY RecName: Full=29 kDa ribonucleoprotein B, chloroplastic; AltName:
Full=CP29B; Flags: Precursor
gi|14135|emb|CAA43428.1| 29kD B ribonucleoprotein [Nicotiana sylvestris]
Length = 291
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 29 STLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEA 88
S +S R++V LS D LKE F+ G +V +KV+ DR +GRS+GFGFV+Y+S +E
Sbjct: 202 SVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEV 261
Query: 89 ERAREGMNAKYLDGWVIFVDPAKSREAR 116
A + +N LDG I V A+ R R
Sbjct: 262 NDAIDSLNGVDLDGRSIRVSAAEERPRR 289
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV L L F G + +VI D+ TGRS+GFGFV+ ++ EE E A +
Sbjct: 88 KLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKEEVEAAEQQ 147
Query: 95 MNAKYLDGWVIFVD----PAK 111
N +DG I V+ PAK
Sbjct: 148 FNGYEIDGRAIRVNAGPAPAK 168
>gi|344287651|ref|XP_003415566.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Loxodonta
africana]
Length = 644
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DE LKE F+ FG+ + KV+ D +G+SKGFGFVSY E+A +A E M
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K + G VIFV A+ + R
Sbjct: 252 NGKEISGKVIFVGRAQKKVER 272
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L++ L DEKL++ F+PFG + +KV+ + GRSKGFGFV ++S EEA +A M
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N + + ++V A+ +E R
Sbjct: 354 NGRIVGSKPLYVALAQRKEER 374
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L + F+ FG ++ KV+ D SKG+ FV + + E A++A E M
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKM 158
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N L+ +FV KSR+ R
Sbjct: 159 NGMLLNDRKVFVGRFKSRKER 179
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V L T+ L E F+P G ++ +V D T RS G+ +V++ +AERA + M
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 96 NAKYLDGWVIFV 107
N + G I +
Sbjct: 73 NFDVIKGKPIRI 84
>gi|324507276|gb|ADY43089.1| RNA-binding motif, single-stranded-interacting protein 1 [Ascaris
suum]
Length = 673
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
Query: 6 SFRRALSSGSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKV 65
S RA ++G+ +++ S ++ L+S +++ GL TTDE L++ +G ++ +K
Sbjct: 274 SANRASAAGT--VRNNNDSPHSDAPLSSTNVYIRGLDPNTTDEDLRQKCDQYGVILSTKA 331
Query: 66 ITDRATGRSKGFGFVSYTSIEEAERAREGMN 96
I D+ATG+ KG+GFV + S E A RA EG+N
Sbjct: 332 IMDKATGQCKGYGFVDFESAEAAMRAVEGLN 362
>gi|281344898|gb|EFB20482.1| hypothetical protein PANDA_020836 [Ailuropoda melanoleuca]
Length = 674
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DE LKE F+ FG+ + KV+ D +G+SKGFGFVSY E+A +A E M
Sbjct: 206 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEM 264
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K + G VIFV A+ + R
Sbjct: 265 NGKEISGKVIFVGRAQKKVER 285
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L++ L DEKL++ F+PFG + +KV+ + GRSKGFGFV ++S EEA +A M
Sbjct: 309 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEM 366
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N + + ++V A+ +E R
Sbjct: 367 NGRIVGSKPLYVALAQRKEER 387
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L + F+ FG ++ KV+ D SKG+ FV + + E A++A E M
Sbjct: 114 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKM 171
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N L+ +FV KSR+ R
Sbjct: 172 NGMLLNDRKVFVGRFKSRKER 192
>gi|431931272|ref|YP_007244318.1| RRM domain-containing RNA-binding protein [Thioflavicoccus mobilis
8321]
gi|431829575|gb|AGA90688.1| RRM domain-containing RNA-binding protein [Thioflavicoccus mobilis
8321]
Length = 94
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++V L+ T+++L+EAF FG++ VITD+ TG+SKGFGFV + EA+ A + +
Sbjct: 3 IYVGNLAYGVTEDELREAFGAFGEISSVSVITDKFTGQSKGFGFVEMPNNSEADAAIKAL 62
Query: 96 NAKYLDGWVIFVDPAKSREARPP 118
N L G I V+ A+ R RPP
Sbjct: 63 NETPLKGRNIRVNEARPRAERPP 85
>gi|426223382|ref|XP_004005854.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Ovis aries]
gi|440907815|gb|ELR57912.1| Nucleolysin TIA-1 isoform p40 [Bos grunniens mutus]
Length = 386
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS T E +K AFAPFG++ ++V+ D ATG+SKG+GFVS+ + +AE A +
Sbjct: 107 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 166
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPP 121
M ++L G I + A R PP P
Sbjct: 167 MGGQWLGGRQIRTNWA----TRKPPAP 189
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 39/70 (55%), Gaps = 6/70 (8%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++ G++ T++ +++ F+PFGQ++ +V D KG+ FV + S E A A +
Sbjct: 216 VYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSV 269
Query: 96 NAKYLDGWVI 105
N ++G V+
Sbjct: 270 NGTTIEGHVV 279
>gi|119569771|gb|EAW49386.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_b [Homo sapiens]
Length = 282
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 3/99 (3%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS T E +K AFAPFG++ ++V+ D ATG+SKG+GFVS+ + +AE A
Sbjct: 76 HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVH 135
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
M ++L G I + A +PP P E ++ F
Sbjct: 136 MGGQWLGGRQIRTNWATR---KPPAPKSTQENNTKQLRF 171
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++ G++ TD+ +++ F+PFGQ++ +V + KG+ FV +++ E A A +
Sbjct: 185 VYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSV 238
Query: 96 NAKYLDGWVI 105
N ++G V+
Sbjct: 239 NGTTIEGHVV 248
>gi|47220951|emb|CAG03484.1| unnamed protein product [Tetraodon nigroviridis]
Length = 603
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
LFV GLS TTD+ LKEAF V ++++TD+ TG SKGFGFV + + + + A+E M
Sbjct: 475 LFVKGLSEDTTDQSLKEAFEA---AVAARIVTDKETGSSKGFGFVDFDNEADCKAAKEAM 531
Query: 96 NAKYLDGWVIFVDPAK 111
+ +DG + +D AK
Sbjct: 532 DDGEIDGSKVTLDYAK 547
>gi|149693775|ref|XP_001503500.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Equus
caballus]
Length = 644
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DE LKE F+ FG+ + KV+ D +G+SKGFGFVSY E+A +A E M
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K + G VIFV A+ + R
Sbjct: 252 NGKEISGKVIFVGRAQKKVER 272
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L++ L DEKL++ F+PFG + +KV+ + GRSKGFGFV ++S EEA +A M
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N + + ++V A+ +E R
Sbjct: 354 NGRIVGSKPLYVALAQRKEER 374
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L + F+ FG ++ KV+ D SKG+ FV + + E A++A E M
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKM 158
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N L+ +FV KSR+ R
Sbjct: 159 NGMLLNDRKVFVGRFKSRKER 179
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V L T+ L E F+P G ++ +V D T RS G+ +V++ +AERA + M
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 96 NAKYLDGWVIFV 107
N + G I +
Sbjct: 73 NFDVIKGKPIRI 84
>gi|4455315|emb|CAB36850.1| RNA-binding protein like [Arabidopsis thaliana]
gi|7268090|emb|CAB78428.1| RNA-binding protein like [Arabidopsis thaliana]
Length = 126
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 46/64 (71%)
Query: 39 SGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAK 98
S LS TTD+ L+EAF+ +G +V + V+ DR T RS+GFGFV+Y+S EAE A GM+ K
Sbjct: 47 SDLSPTTTDDMLREAFSGYGNVVDAIVMRDRYTDRSRGFGFVTYSSHSEAEAAVSGMDGK 106
Query: 99 YLDG 102
L+G
Sbjct: 107 ELNG 110
>gi|73976763|ref|XP_857000.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Canis lupus
familiaris]
Length = 644
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DE LKE F+ FG+ + KV+ D +G+SKGFGFVSY E+A +A E M
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K + G VIFV A+ + R
Sbjct: 252 NGKEISGKVIFVGRAQKKVER 272
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L++ L DEKL++ F+PFG + +KV+ + GRSKGFGFV ++S EEA +A M
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N + + ++V A+ +E R
Sbjct: 354 NGRIVGSKPLYVALAQRKEER 374
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L + F+ FG ++ KV+ D SKG+ FV + + E A++A E M
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKM 158
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N L+ +FV KSR+ R
Sbjct: 159 NGMLLNDRKVFVGRFKSRKER 179
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V L T+ L E F+P G ++ +V D T RS G+ +V++ +AERA + M
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 96 NAKYLDGWVIFV 107
N + G I +
Sbjct: 73 NFDVIKGKPIRI 84
>gi|45384000|ref|NP_990596.1| nucleolin [Gallus gallus]
gi|128840|sp|P15771.1|NUCL_CHICK RecName: Full=Nucleolin; AltName: Full=Protein C23
gi|63711|emb|CAA35060.1| unnamed protein product [Gallus gallus]
Length = 694
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 53/81 (65%), Gaps = 3/81 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E L+E+F + ++++TDR TG SKGFGFV ++S E+A+ A+
Sbjct: 552 SKTLFVRGLSEDTTEETLRESFEGS---ISARIVTDRDTGSSKGFGFVDFSSPEDAKAAK 608
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
E M +DG + +D AK +
Sbjct: 609 EAMEDGEIDGNKVTLDFAKPK 629
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Query: 19 KSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFG 78
KSQ S + S L V+ LS ++E L+E F + S + GR KG+
Sbjct: 446 KSQQESQKGGGERESKTLIVNNLSYAASEETLQELF----KKATSIKMPQNNQGRPKGYA 501
Query: 79 FVSYTSIEEAERAREGMNAKYLDGWVIFVD 108
FV + + E+A+ A N ++G I ++
Sbjct: 502 FVEFPTAEDAKEALNSCNNTEIEGRAIRLE 531
>gi|395853072|ref|XP_003799044.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Otolemur
garnettii]
Length = 633
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DE LKE F+ FG+ + KV+ D +G+SKGFGFVSY E+A +A E M
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K + G VIFV A+ + R
Sbjct: 252 NGKEISGKVIFVGRAQKKVER 272
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L++ L DEKL++ F+PFG + +KV+ + GRSKGFGFV ++S EEA +A M
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N + + ++V A+ +E R
Sbjct: 354 NGRIVGSKPLYVALAQRKEER 374
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L + F+ FG ++ KV+ D SKG+ FV + + E A++A E M
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKM 158
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N L+ +FV KSR+ R
Sbjct: 159 NGMLLNDRKVFVGRFKSRKER 179
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V L T+ L E F+P G ++ +V D T RS G+ +V++ +AERA + M
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 96 NAKYLDGWVIFV 107
N + G I +
Sbjct: 73 NFDVIKGKPIRI 84
>gi|395853070|ref|XP_003799043.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Otolemur
garnettii]
Length = 646
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DE LKE F+ FG+ + KV+ D +G+SKGFGFVSY E+A +A E M
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K + G VIFV A+ + R
Sbjct: 252 NGKEISGKVIFVGRAQKKVER 272
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L++ L DEKL++ F+PFG + +KV+ + GRSKGFGFV ++S EEA +A M
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N + + ++V A+ +E R
Sbjct: 354 NGRIVGSKPLYVALAQRKEER 374
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L + F+ FG ++ KV+ D SKG+ FV + + E A++A E M
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKM 158
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N L+ +FV KSR+ R
Sbjct: 159 NGMLLNDRKVFVGRFKSRKER 179
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V L T+ L E F+P G ++ +V D T RS G+ +V++ +AERA + M
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 96 NAKYLDGWVIFV 107
N + G I +
Sbjct: 73 NFDVIKGKPIRI 84
>gi|395853068|ref|XP_003799042.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Otolemur
garnettii]
Length = 662
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DE LKE F+ FG+ + KV+ D +G+SKGFGFVSY E+A +A E M
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K + G VIFV A+ + R
Sbjct: 252 NGKEISGKVIFVGRAQKKVER 272
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L++ L DEKL++ F+PFG + +KV+ + GRSKGFGFV ++S EEA +A M
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N + + ++V A+ +E R
Sbjct: 354 NGRIVGSKPLYVALAQRKEER 374
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L + F+ FG ++ KV+ D SKG+ FV + + E A++A E M
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKM 158
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N L+ +FV KSR+ R
Sbjct: 159 NGMLLNDRKVFVGRFKSRKER 179
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V L T+ L E F+P G ++ +V D T RS G+ +V++ +AERA + M
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 96 NAKYLDGWVIFV 107
N + G I +
Sbjct: 73 NFDVIKGKPIRI 84
>gi|348502707|ref|XP_003438909.1| PREDICTED: embryonic polyadenylate-binding protein-like
[Oreochromis niloticus]
Length = 623
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ TDEKLKE F+ FG+ + +V+ D GRS+GFGFV+Y E+A++A M
Sbjct: 193 VYIKNFGEDFTDEKLKEVFSAFGRTLSVRVMKDE-KGRSRGFGFVNYAHHEDAQKAVNEM 251
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K ++G +++V A+ R R
Sbjct: 252 NGKEINGKILYVGRAQKRLER 272
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V L DE+L++ FAP+G + +KV+TD + +SKGFGFV ++S EEA +A M
Sbjct: 296 LYVKNLDDSIDDERLRKEFAPYGTITSAKVMTDGS--QSKGFGFVCFSSPEEATKAVTEM 353
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N + + ++V A+ RE R
Sbjct: 354 NGRIVATKPLYVALAQRREER 374
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ + ++ L + F+ FG ++ KV+ D SKG+GFV + + E A RA E M
Sbjct: 101 IFIKNMDESIDNKALYDTFSAFGNILSCKVVCDEKG--SKGYGFVHFETQEAANRAIETM 158
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N L+ +FV KSR+ R
Sbjct: 159 NGMLLNDRKVFVGHFKSRKER 179
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V L T+ L + F+P G ++ +V D T RS G+ +V++ +AE A + M
Sbjct: 13 LYVGDLHPDVTEAMLYQKFSPAGPIMSIRVCRDIITRRSLGYAYVNFQQPADAECALDTM 72
Query: 96 NAKYLDG 102
N + G
Sbjct: 73 NYDVIKG 79
>gi|338721952|ref|XP_003364452.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Equus
caballus]
Length = 631
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DE LKE F+ FG+ + KV+ D +G+SKGFGFVSY E+A +A E M
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K + G VIFV A+ + R
Sbjct: 252 NGKEISGKVIFVGRAQKKVER 272
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L++ L DEKL++ F+PFG + +KV+ + GRSKGFGFV ++S EEA +A M
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N + + ++V A+ +E R
Sbjct: 354 NGRIVGSKPLYVALAQRKEER 374
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L + F+ FG ++ KV+ D SKG+ FV + + E A++A E M
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKM 158
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N L+ +FV KSR+ R
Sbjct: 159 NGMLLNDRKVFVGRFKSRKER 179
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V L T+ L E F+P G ++ +V D T RS G+ +V++ +AERA + M
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 96 NAKYLDGWVIFV 107
N + G I +
Sbjct: 73 NFDVIKGKPIRI 84
>gi|338721949|ref|XP_003364451.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Equus
caballus]
Length = 660
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DE LKE F+ FG+ + KV+ D +G+SKGFGFVSY E+A +A E M
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K + G VIFV A+ + R
Sbjct: 252 NGKEISGKVIFVGRAQKKVER 272
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L++ L DEKL++ F+PFG + +KV+ + GRSKGFGFV ++S EEA +A M
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N + + ++V A+ +E R
Sbjct: 354 NGRIVGSKPLYVALAQRKEER 374
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L + F+ FG ++ KV+ D SKG+ FV + + E A++A E M
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKM 158
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N L+ +FV KSR+ R
Sbjct: 159 NGMLLNDRKVFVGRFKSRKER 179
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V L T+ L E F+P G ++ +V D T RS G+ +V++ +AERA + M
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 96 NAKYLDGWVIFV 107
N + G I +
Sbjct: 73 NFDVIKGKPIRI 84
>gi|115497910|ref|NP_001069577.1| nucleolysin TIA-1 isoform p40 [Bos taurus]
gi|111308630|gb|AAI20428.1| TIA1 cytotoxic granule-associated RNA binding protein [Bos taurus]
gi|296482421|tpg|DAA24536.1| TPA: TIA1 cytotoxic granule-associated RNA binding protein [Bos
taurus]
Length = 384
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS T E +K AFAPFG++ ++V+ D ATG+SKG+GFVS+ + +AE A +
Sbjct: 107 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 166
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPP 121
M ++L G I + A R PP P
Sbjct: 167 MGGQWLGGRQIRTNWA----TRKPPAP 189
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 29 STLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEA 88
S+ ++ ++ G++ T++ +++ F+PFGQ++ +V D KG+ FV + S E A
Sbjct: 209 SSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESA 262
Query: 89 ERAREGMNAKYLDGWVI 105
A +N ++G V+
Sbjct: 263 AHAIVSVNGTTIEGHVV 279
>gi|335775520|gb|AEH58599.1| nucleolysin TIAR-like protein, partial [Equus caballus]
Length = 242
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 3/99 (3%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS T E +K AFAPFG++ ++V+ D ATG+SKG+GFVS+ + +AE A
Sbjct: 54 HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVH 113
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
M ++L G I + A +PP P E ++ F
Sbjct: 114 MGGQWLGGRQIRTNWATR---KPPAPKSTQENNTKQLRF 149
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++ G++ TD+ +++ F+PFGQ++ +V + KG+ FV +++ E A A +
Sbjct: 163 VYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSV 216
Query: 96 NAKYLDGWVI 105
N ++G V+
Sbjct: 217 NGTTIEGHVV 226
>gi|149036617|gb|EDL91235.1| rCG56007, isoform CRA_a [Rattus norvegicus]
Length = 386
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS T E +K AFAPFG++ ++V+ D ATG+SKG+GFVS+ + +AE A +
Sbjct: 107 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 166
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPP 121
M ++L G I + A R PP P
Sbjct: 167 MGGQWLGGRQIRTNWA----TRKPPAP 189
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++ G++ T++ +++ F+PFGQ++ +V D KG+ F+ ++S E A A +
Sbjct: 216 VYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFIRFSSHESAAHAIVSV 269
Query: 96 NAKYLDGWVI 105
N ++G V+
Sbjct: 270 NGTTIEGHVV 279
>gi|58865762|ref|NP_001012096.1| TIA1 cytotoxic granule-associated RNA binding protein [Rattus
norvegicus]
gi|56268852|gb|AAH87064.1| TIA1 cytotoxic granule-associated RNA binding protein [Rattus
norvegicus]
gi|149036619|gb|EDL91237.1| rCG56007, isoform CRA_c [Rattus norvegicus]
Length = 375
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS T E +K AFAPFG++ ++V+ D ATG+SKG+GFVS+ + +AE A +
Sbjct: 96 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 155
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPP 121
M ++L G I + A R PP P
Sbjct: 156 MGGQWLGGRQIRTNWA----TRKPPAP 178
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++ G++ T++ +++ F+PFGQ++ +V D KG+ F+ ++S E A A +
Sbjct: 205 VYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFIRFSSHESAAHAIVSV 258
Query: 96 NAKYLDGWVI 105
N ++G V+
Sbjct: 259 NGTTIEGHVV 268
>gi|410966842|ref|XP_003989936.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Felis catus]
Length = 644
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DE LKE F+ FG+ + KV+ D +G+SKGFGFVSY E+A +A E M
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K + G VIFV A+ + R
Sbjct: 252 NGKEISGKVIFVGRAQKKVER 272
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L++ L DEKL++ F+PFG + +KV+ + GRSKGFGFV ++S EEA +A M
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N + + ++V A+ +E R
Sbjct: 354 NGRIVGSKPLYVALAQRKEER 374
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L + F+ FG ++ KV+ D SKG+ FV + + E A++A E M
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKM 158
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N L+ +FV KSR+ R
Sbjct: 159 NGMLLNDRKVFVGRFKSRKER 179
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V L T+ L E F+P G ++ +V D T RS G+ +V++ +AERA + M
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 96 NAKYLDGWVIFV 107
N + G I +
Sbjct: 73 NFDVIKGKPIRI 84
>gi|374376206|ref|ZP_09633864.1| RNP-1 like RNA-binding protein [Niabella soli DSM 19437]
gi|373233046|gb|EHP52841.1| RNP-1 like RNA-binding protein [Niabella soli DSM 19437]
Length = 110
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 51/81 (62%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
++V LS D+ L+ FAP+G++ +K+++D+ T RSKGFGFV + EEA+ A E
Sbjct: 2 NIYVGNLSWNLKDQDLQNLFAPYGEVTSAKIVSDKFTNRSKGFGFVEMATDEEAKAAIEA 61
Query: 95 MNAKYLDGWVIFVDPAKSREA 115
+N +DG I V+ ++ +E
Sbjct: 62 LNGTEVDGRNIVVNESRPKEG 82
>gi|410966844|ref|XP_003989937.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Felis catus]
Length = 631
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DE LKE F+ FG+ + KV+ D +G+SKGFGFVSY E+A +A E M
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K + G VIFV A+ + R
Sbjct: 252 NGKEISGKVIFVGRAQKKVER 272
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L++ L DEKL++ F+PFG + +KV+ + GRSKGFGFV ++S EEA +A M
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N + + ++V A+ +E R
Sbjct: 354 NGRIVGSKPLYVALAQRKEER 374
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L + F+ FG ++ KV+ D SKG+ FV + + E A++A E M
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKM 158
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N L+ +FV KSR+ R
Sbjct: 159 NGMLLNDRKVFVGRFKSRKER 179
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V L T+ L E F+P G ++ +V D T RS G+ +V++ +AERA + M
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 96 NAKYLDGWVIFV 107
N + G I +
Sbjct: 73 NFDVIKGKPIRI 84
>gi|344287653|ref|XP_003415567.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Loxodonta
africana]
Length = 660
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DE LKE F+ FG+ + KV+ D +G+SKGFGFVSY E+A +A E M
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K + G VIFV A+ + R
Sbjct: 252 NGKEISGKVIFVGRAQKKVER 272
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L++ L DEKL++ F+PFG + +KV+ + GRSKGFGFV ++S EEA +A M
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N + + ++V A+ +E R
Sbjct: 354 NGRIVGSKPLYVALAQRKEER 374
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L + F+ FG ++ KV+ D SKG+ FV + + E A++A E M
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKM 158
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N L+ +FV KSR+ R
Sbjct: 159 NGMLLNDRKVFVGRFKSRKER 179
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V L T+ L E F+P G ++ +V D T RS G+ +V++ +AERA + M
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 96 NAKYLDGWVIFV 107
N + G I +
Sbjct: 73 NFDVIKGKPIRI 84
>gi|119223939|gb|AAI26843.1| TIAL1 protein [Bos taurus]
Length = 279
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 3/99 (3%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS T E +K AFAPFG++ ++V+ D ATG+SKG+GFVS+ + +AE A
Sbjct: 66 HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVH 125
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
M ++L G I + A +PP P E ++ F
Sbjct: 126 MGGQWLGGRQIRTNWATR---KPPAPKSTQENNTKQLRF 161
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++ G++ TD+ +++ F+PFGQ++ +V + KG+ FV +++ E A A +
Sbjct: 175 VYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSV 228
Query: 96 NAKYLDGWVI 105
N ++G V+
Sbjct: 229 NGTTIEGHVV 238
>gi|449268618|gb|EMC79472.1| Polyadenylate-binding protein 4 [Columba livia]
Length = 630
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DE+LKE F+ +G+ + KV+TD TG+SKGFGFVS+ E+A +A E M
Sbjct: 193 VYIKNFGDDMDDERLKELFSKYGKTLSVKVMTD-PTGKSKGFGFVSFEKHEDANKAVEEM 251
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K ++G ++FV A+ + R
Sbjct: 252 NGKDINGKMVFVGRAQKKVER 272
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L++ L DEKL++ F+PFG + +KV+ + GRSKGFGFV ++S EEA +A M
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGAITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N + + ++V A+ +E R
Sbjct: 354 NGRIVGSKPLYVALAQRKEER 374
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L + F+ FG ++ KV+ D SKG+ FV + + + A+RA E M
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQDAADRAIEKM 158
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N L+ +FV KSR+ R
Sbjct: 159 NGMLLNDRKVFVGRFKSRKER 179
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V L T+ L E F+P G ++ +V D T RS G+ +V++ +AERA + M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 96 NAKYLDGWVIFV 107
N + G I +
Sbjct: 73 NFDVIKGKPIRI 84
>gi|426223384|ref|XP_004005855.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Ovis aries]
Length = 375
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS T E +K AFAPFG++ ++V+ D ATG+SKG+GFVS+ + +AE A +
Sbjct: 96 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 155
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPP 121
M ++L G I + A R PP P
Sbjct: 156 MGGQWLGGRQIRTNWA----TRKPPAP 178
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 29 STLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEA 88
S+ ++ ++ G++ T++ +++ F+PFGQ++ +V D KG+ FV + S E A
Sbjct: 198 SSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESA 251
Query: 89 ERAREGMNAKYLDGWVI 105
A +N ++G V+
Sbjct: 252 AHAIVSVNGTTIEGHVV 268
>gi|3342756|gb|AAC41383.1| RNA-binding protein AxRNBP [Ambystoma mexicanum]
Length = 144
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LFV GLS + + L+ AF+ +G + + V+ DR TGRS+GFGFV++ + +A+ A
Sbjct: 8 KLFVGGLSFDSNEHSLESAFSKYGDVCDAVVVKDRETGRSRGFGFVTFRNPSDAKEALHA 67
Query: 95 MNAKYLDGWVIFVDPA 110
MN + LDG I VD A
Sbjct: 68 MNGESLDGRQIRVDLA 83
>gi|148666756|gb|EDK99172.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_f
[Mus musculus]
Length = 375
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS T E +K AFAPFG++ ++V+ D ATG+SKG+GFVS+ + +AE A +
Sbjct: 96 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 155
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPP 121
M ++L G I + A R PP P
Sbjct: 156 MGGQWLGGRQIRTNWA----TRKPPAP 178
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++ G++ T++ +++ F+PFGQ++ +V D KG+ FV ++S E A A +
Sbjct: 205 VYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFSSHESAAHAIVSV 258
Query: 96 NAKYLDGWVI 105
N ++G V+
Sbjct: 259 NGTTIEGHVV 268
>gi|255760009|ref|NP_001157550.1| nucleolysin TIA-1 isoform 2 [Mus musculus]
gi|28386187|gb|AAH46812.1| Tia1 protein [Mus musculus]
Length = 377
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS T E +K AFAPFG++ ++V+ D ATG+SKG+GFVS+ + +AE A +
Sbjct: 98 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 157
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPP 121
M ++L G I + A R PP P
Sbjct: 158 MGGQWLGGRQIRTNWA----TRKPPAP 180
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++ G++ T++ +++ F+PFGQ++ +V D KG+ FV ++S E A A +
Sbjct: 207 VYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFSSHESAAHAIVSV 260
Query: 96 NAKYLDGWVI 105
N ++G V+
Sbjct: 261 NGTTIEGHVV 270
>gi|148231554|ref|NP_001080069.1| cold-inducible RNA-binding protein A [Xenopus laevis]
gi|284018072|sp|O93235.2|CIRBA_XENLA RecName: Full=Cold-inducible RNA-binding protein A; AltName:
Full=Cold-inducible RNA-binding protein; Short=XCIRP;
AltName: Full=Cold-inducible RNA-binding protein 1;
Short=XCIRP-1; AltName: Full=Glycine-rich RNA-binding
protein CIRP-A
gi|27735413|gb|AAH41204.1| Cirbp-prov protein [Xenopus laevis]
Length = 166
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 51/76 (67%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LF+ GL+ T ++ L++AF +G++ V+ DR T RS+GFGFV++ ++++A+ A
Sbjct: 6 KLFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMA 65
Query: 95 MNAKYLDGWVIFVDPA 110
MN K +DG I VD A
Sbjct: 66 MNGKSVDGRQIRVDQA 81
>gi|410966840|ref|XP_003989935.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Felis catus]
Length = 660
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DE LKE F+ FG+ + KV+ D +G+SKGFGFVSY E+A +A E M
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K + G VIFV A+ + R
Sbjct: 252 NGKEISGKVIFVGRAQKKVER 272
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L++ L DEKL++ F+PFG + +KV+ + GRSKGFGFV ++S EEA +A M
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N + + ++V A+ +E R
Sbjct: 354 NGRIVGSKPLYVALAQRKEER 374
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L + F+ FG ++ KV+ D SKG+ FV + + E A++A E M
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKM 158
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N L+ +FV KSR+ R
Sbjct: 159 NGMLLNDRKVFVGRFKSRKER 179
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V L T+ L E F+P G ++ +V D T RS G+ +V++ +AERA + M
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 96 NAKYLDGWVIFV 107
N + G I +
Sbjct: 73 NFDVIKGKPIRI 84
>gi|355724191|gb|AES08143.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1
[Mustela putorius furo]
Length = 183
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 3/99 (3%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS T E +K AFAPFG++ ++V+ D ATG+SKG+GFVS+ + +AE A
Sbjct: 87 HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVH 146
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
M ++L G I + A +PP P E ++ F
Sbjct: 147 MGGQWLGGRQIRTNWATR---KPPAPKSTQENNTKQLRF 182
>gi|189467129|ref|ZP_03015914.1| hypothetical protein BACINT_03513 [Bacteroides intestinalis DSM
17393]
gi|224535639|ref|ZP_03676178.1| hypothetical protein BACCELL_00503 [Bacteroides cellulosilyticus
DSM 14838]
gi|423222774|ref|ZP_17209244.1| hypothetical protein HMPREF1062_01430 [Bacteroides cellulosilyticus
CL02T12C19]
gi|189435393|gb|EDV04378.1| hypothetical protein BACINT_03513 [Bacteroides intestinalis DSM
17393]
gi|224522743|gb|EEF91848.1| hypothetical protein BACCELL_00503 [Bacteroides cellulosilyticus
DSM 14838]
gi|392641138|gb|EIY34924.1| hypothetical protein HMPREF1062_01430 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 94
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 48/82 (58%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++SGLS D L E F+ +G+ +KVI DR +GRS+GFGFV TS + ++A +
Sbjct: 3 IYISGLSYGINDADLNELFSAYGETSSAKVIMDRESGRSRGFGFVEMTSDTDGQKAINEL 62
Query: 96 NAKYLDGWVIFVDPAKSREARP 117
N D I V A+ RE RP
Sbjct: 63 NGAEYDQKTISVSVARPREERP 84
>gi|118101731|ref|XP_417821.2| PREDICTED: polyadenylate-binding protein 4 [Gallus gallus]
Length = 630
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DE+LKE F+ +G+ + KV+TD TG+SKGFGFVS+ E+A +A E M
Sbjct: 193 VYIKNFGDDMDDERLKELFSKYGKTLSVKVMTD-PTGKSKGFGFVSFEKHEDANKAVEEM 251
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K ++G ++FV A+ + R
Sbjct: 252 NGKDINGKMVFVGRAQKKVER 272
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L++ L DEKL++ F+PFG + +KV+ + GRSKGFGFV ++S EEA +A M
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N + + ++V A+ +E R
Sbjct: 354 NGRIVGSKPLYVALAQRKEER 374
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L + F+ FG ++ KV+ D SKG+ FV + + + A+RA E M
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQDAADRAIEKM 158
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N L+ +FV KSR+ R
Sbjct: 159 NGMLLNDRKVFVGRFKSRKER 179
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V L T+ L E F+P G ++ +V D T RS G+ +V++ +AERA + M
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 96 NAKYLDGWVIFV 107
N + G I +
Sbjct: 73 NFDVIKGKPIRI 84
>gi|441613453|ref|XP_004088139.1| PREDICTED: polyadenylate-binding protein 1-like [Nomascus
leucogenys]
Length = 638
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 34 PRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERARE 93
P +++ DE+LK+ F FG + KV+TD+ +G+SKGFGFVS+ E+A++A +
Sbjct: 191 PNVYIKNFGEDMDDERLKDLFGKFGPTLSVKVMTDQ-SGKSKGFGFVSFEKHEDAQKAVD 249
Query: 94 GMNAKYLDGWVIFVDPAKSREAR 116
MN K L+G I+V A+ + R
Sbjct: 250 EMNGKELNGKQIYVGRAQKKVER 272
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V L DE+L++AF+PFG + +KV+ + GRSKGFGFV ++S EEA +A M
Sbjct: 296 LYVKNLDDAIDDERLRKAFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N + + ++V A+ +E R
Sbjct: 354 NGRIVATKPLYVALAQRKEER 374
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+FV L + ++ L + + FG ++ KV+ D SKG+GFV + + E AERA E M
Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNVLSCKVVCDE--NGSKGYGFVHFETREAAERAIEKM 158
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N L+ +FV KSR+ R
Sbjct: 159 NGIPLNDRKVFVGRFKSRKER 179
>gi|148666754|gb|EDK99170.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_d
[Mus musculus]
Length = 385
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS T E +K AFAPFG++ ++V+ D ATG+SKG+GFVS+ + +AE A +
Sbjct: 106 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 165
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPP 121
M ++L G I + A R PP P
Sbjct: 166 MGGQWLGGRQIRTNWA----TRKPPAP 188
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++ G++ T++ +++ F+PFGQ++ +V D KG+ FV ++S E A A +
Sbjct: 215 VYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFSSHESAAHAIVSV 268
Query: 96 NAKYLDGWVI 105
N ++G V+
Sbjct: 269 NGTTIEGHVV 278
>gi|414587608|tpg|DAA38179.1| TPA: hypothetical protein ZEAMMB73_126317 [Zea mays]
Length = 750
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 12 SSGSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRAT 71
S+G + L I+ + T+ L++ L D L F+ FG++V +KVI DR T
Sbjct: 407 SAGGGAASTGLNGIKKDYDETN--LYIGYLPPTMDDAGLVSLFSQFGEIVMAKVIKDRNT 464
Query: 72 GRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFV 107
G+SKG+GFV Y+ + +A A MN +L+G VI V
Sbjct: 465 GQSKGYGFVKYSDVSQANAAIAAMNGHHLEGRVIAV 500
>gi|348582138|ref|XP_003476833.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Cavia porcellus]
Length = 482
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++V DE+L+ F+ +G+ + KV+TD ++G+SKGFGFVS+ S E A++A E M
Sbjct: 304 VYVKNFGEDMDDERLQGVFSKYGRTLSVKVMTD-SSGKSKGFGFVSFDSHEAAKKAVEEM 362
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K ++G ++FV A+ +E R
Sbjct: 363 NGKDINGQLVFVGRAQKKEER 383
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+L++ L D++L+ AF+ FG + KV+ + G+ KGFG V ++S EEA +A
Sbjct: 406 KLYIKNLDDTVDDDRLRRAFSSFGSISRVKVMEE--EGQRKGFGLVCFSSPEEAAKAMTQ 463
Query: 95 MNAKYL 100
MN + L
Sbjct: 464 MNGRVL 469
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+ + L R ++ L E F+ FG+++ SKV++D SKG+ FV + S A+ A + M
Sbjct: 212 VIIKNLDRSVDNKTLYEHFSGFGRILSSKVMSDDQG--SKGYAFVHFQSQSAADCAIQEM 269
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K + + V P +SR R
Sbjct: 270 NGKVIRDRQVLVAPFRSRRDR 290
>gi|78186885|ref|YP_374928.1| RNA recognition motif-containing protein [Chlorobium luteolum DSM
273]
gi|78166787|gb|ABB23885.1| RNA-binding region RNP-1 (RNA recognition motif) [Chlorobium
luteolum DSM 273]
Length = 90
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 51/88 (57%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++V L +++ L++AF+ FG++ + +ITD+ +GRSKGFGFV + A A E M
Sbjct: 3 IYVGNLPYTISEDDLRDAFSEFGEVASANIITDKFSGRSKGFGFVEMPDDDAAREAIESM 62
Query: 96 NAKYLDGWVIFVDPAKSREARPPPPPPY 123
+ K G I V+ AK RE R P Y
Sbjct: 63 HNKDFKGRSIMVNEAKPREERAPRRDRY 90
>gi|449267712|gb|EMC78625.1| Nucleolysin TIA-1 isoform p40, partial [Columba livia]
Length = 361
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS T E +K AFAPFG++ ++V+ D ATG+SKG+GFVS+ + +AE A +
Sbjct: 87 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 146
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPP 121
M ++L G I + A R PP P
Sbjct: 147 MGGQWLGGRQIRTNWA----TRKPPAP 169
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 29 STLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEA 88
S+ ++ ++ G++ T++ +++ F+PFGQ++ +V D KG+ FV + S E A
Sbjct: 189 SSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESA 242
Query: 89 ERAREGMNAKYLDGWVI 105
A +N ++G ++
Sbjct: 243 AHAIVSVNGTTIEGHIV 259
>gi|449439327|ref|XP_004137437.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 168
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 68/122 (55%), Gaps = 6/122 (4%)
Query: 1 MAFASSFRRALSS------GSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAF 54
MAF S + S GS + S+L R ++ ++FV GLS + D L+ AF
Sbjct: 31 MAFLSRVGKIFSQSSASGIGSHLQPSKLSIFRTLRFVSGSKVFVGGLSYNSDDLTLRVAF 90
Query: 55 APFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSRE 114
+ +G++V ++V+ D TGR KGFGFV++++ EEA A + ++ K L G I + A +
Sbjct: 91 SKYGEVVEARVVMDPDTGRCKGFGFVTFSAKEEASSAIKALDGKDLGGRRIRCNYAVEKV 150
Query: 115 AR 116
AR
Sbjct: 151 AR 152
>gi|301790633|ref|XP_002930398.1| PREDICTED: polyadenylate-binding protein 4-like [Ailuropoda
melanoleuca]
Length = 644
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DE LKE F+ FG+ + KV+ D +G+SKGFGFVSY E+A +A E M
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K + G VIFV A+ + R
Sbjct: 252 NGKEISGKVIFVGRAQKKVER 272
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L++ L DEKL++ F+PFG + +KV+ + GRSKGFGFV ++S EEA +A M
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N + + ++V A+ +E R
Sbjct: 354 NGRIVGSKPLYVALAQRKEER 374
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L + F+ FG ++ KV+ D SKG+ FV + + E A++A E M
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKM 158
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N L+ +FV KSR+ R
Sbjct: 159 NGMLLNDRKVFVGRFKSRKER 179
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V L T+ L E F+P G ++ V D T RS G+ +V++ +AERA + M
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIWVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 96 NAKYLDGWVIFV 107
N + G I +
Sbjct: 73 NFDVIKGKPIRI 84
>gi|7439974|pir||JC6571 cold-inducible RNA-binding protein homolog - clawed frog
gi|3341887|dbj|BAA31861.1| cold-inducible RNA binding protein [Xenopus laevis]
Length = 163
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 51/76 (67%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+LF+ GL+ T ++ L++AF +G++ V+ DR T RS+GFGFV++ ++++A+ A
Sbjct: 6 KLFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMA 65
Query: 95 MNAKYLDGWVIFVDPA 110
MN K +DG I VD A
Sbjct: 66 MNGKSVDGRQIRVDQA 81
>gi|82802757|gb|ABB92429.1| PABP3 [Hylobates lar]
Length = 635
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 34 PRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERARE 93
P +++ DE+LK+ F FG + KV+TD+ +G+SKGFGFVS+ E+A++A +
Sbjct: 191 PNVYIKNFGEDMDDERLKDLFGKFGPTLSVKVMTDQ-SGKSKGFGFVSFEKHEDAQKAVD 249
Query: 94 GMNAKYLDGWVIFVDPAKSREAR 116
MN K L+G I+V A+ + R
Sbjct: 250 EMNGKELNGKQIYVGRAQKKVER 272
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V L DE+L++AF+PFG + +KV+ + GRSKGFGFV ++S EEA +A M
Sbjct: 296 LYVKNLDDAIDDERLRKAFSPFGTITSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEM 353
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N + + ++V A+ +E R
Sbjct: 354 NGRIVATEPLYVALAQRKEER 374
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+FV L + ++ L + + FG ++ KV+ D SKG+GFV + + E AERA E M
Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNVLSCKVVCDE--NGSKGYGFVHFGTREAAERAIEKM 158
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N L+ +FV KSR+ R
Sbjct: 159 NGIPLNDCKVFVGRFKSRKER 179
>gi|2281006|dbj|BAA21559.1| T-cluster binding protein [Homo sapiens]
gi|119569770|gb|EAW49385.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_a [Homo sapiens]
Length = 265
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 3/99 (3%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS T E +K AFAPFG++ ++V+ D ATG+SKG+GFVS+ + +AE A
Sbjct: 59 HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVH 118
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
M ++L G I + A +PP P E ++ F
Sbjct: 119 MGGQWLGGRQIRTNWATR---KPPAPKSTQENNTKQLRF 154
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++ G++ TD+ +++ F+PFGQ++ +V + KG+ FV +++ E A A +
Sbjct: 168 VYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSV 221
Query: 96 NAKYLDGWVI 105
N ++G V+
Sbjct: 222 NGTTIEGHVV 231
>gi|359688008|ref|ZP_09258009.1| RNP-1 like RNA-binding protein [Leptospira licerasiae serovar
Varillal str. MMD0835]
Length = 100
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S +LFV GLS TTD L++ F G + + ++ DR TGRS+GFGFV++ A A
Sbjct: 2 SSKLFVGGLSWSTTDLTLRQVFETHGAIQEANIVVDRETGRSRGFGFVTFVDQSSANAAV 61
Query: 93 EGMNAKYLDGWVIFVDPA--KSREARP 117
+N K LDG I V A KSR R
Sbjct: 62 SELNGKDLDGRNIVVSVAEDKSRSDRN 88
>gi|312283439|dbj|BAJ34585.1| unnamed protein product [Thellungiella halophila]
Length = 259
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 49/77 (63%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R F+ GL+ T+D L++AF +G L+ +KV+ D+ +GRS+GFGF+++ + + A
Sbjct: 8 RCFIGGLAWSTSDRGLRDAFEKYGHLLEAKVVLDKFSGRSRGFGFITFDEKKAMDEAIAA 67
Query: 95 MNAKYLDGWVIFVDPAK 111
MN LDG I VD A+
Sbjct: 68 MNGMDLDGRTITVDKAQ 84
>gi|444509674|gb|ELV09400.1| Nucleolin [Tupaia chinensis]
Length = 261
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E LKE+F V ++++TDR TG S+GFGFV + S E+A+ A+
Sbjct: 189 SKTLFVKGLSEDTTEETLKESFDG---SVRARIVTDRETGSSRGFGFVDFNSEEDAKAAK 245
Query: 93 EGMNAKYLDGWVIFVD 108
E M +DG + +D
Sbjct: 246 EAMGDGEIDGNKVILD 261
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 16/110 (14%)
Query: 28 NSTLT--SPRLFVSGLSRLTTDEKLKEAF--APFGQLVYSKVITDRATGRSKGFGFVSYT 83
NST + S L +S LS T+E L+E F A F ++ S+ G+SKG+ F+ +
Sbjct: 96 NSTWSGESKTLVLSNLSYNATEETLQEVFEKATFIKVPQSQ------NGKSKGYAFIEFA 149
Query: 84 SIEEAERAREGMNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
S E+A+ A N + ++G I + E + P P QPS+ F
Sbjct: 150 SFEDAKEALNSCNKREIEGRAIRL------ELKGPSGSPNARSQPSKTLF 193
>gi|395841399|ref|XP_003793527.1| PREDICTED: LOW QUALITY PROTEIN: nucleolysin TIA-1 isoform p40,
partial [Otolemur garnettii]
Length = 480
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS T E +K AFAPFG++ ++V+ D ATG+SKG+GFVS+ + +AE A +
Sbjct: 157 HVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 216
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPP 121
M ++L G I + A R PP P
Sbjct: 217 MGGQWLGGRQIRTNWA----TRKPPAP 239
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 58/121 (47%), Gaps = 21/121 (17%)
Query: 15 SSILKSQLGSIRYNSTL--TSPR---LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDR 69
+++ KS + Y+ + +SP ++ G++ T++ +++ F+PFGQ++ +V D
Sbjct: 284 TTVQKSNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD- 342
Query: 70 ATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVI----------FVDPAKSREARPPP 119
KG+ FV + S E A A +N ++G V+ V+P + + P
Sbjct: 343 -----KGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMVNPVQQNQIGYPQ 397
Query: 120 P 120
P
Sbjct: 398 P 398
>gi|363543383|ref|NP_001241701.1| glycine-rich RNA-binding protein [Zea mays]
gi|343227643|gb|AEM17058.1| glycine-rich RNA-binding protein [Zea mays]
Length = 160
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 36 LFVSGLSRLTTDE-KLKEAFAPFGQLVYS-KVITDRATGRSKGFGFVSYTSIEEAERARE 93
FV L+ T++E +L+ AFA G+++ + +VITDR TGRS+GFGFV+++S A E
Sbjct: 11 FFVGELAWATSNESRLENAFASHGEILRTPQVITDRETGRSRGFGFVTFSSENSMLDAIE 70
Query: 94 GMNAKYLDGWVIFVDPAKSR 113
MN K LDG I V+ A+SR
Sbjct: 71 NMNGKELDGHNITVNQAQSR 90
>gi|383118922|ref|ZP_09939662.1| hypothetical protein BSHG_3968 [Bacteroides sp. 3_2_5]
gi|251944121|gb|EES84630.1| hypothetical protein BSHG_3968 [Bacteroides sp. 3_2_5]
Length = 122
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 50/82 (60%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F++G+S ++ L E F FG+++ +K++ DR TGRSKGFGFV + EE A +
Sbjct: 3 IFIAGISYNLSNADLGELFEEFGEVISAKIVMDRETGRSKGFGFVEMPNDEEGNAAIAAL 62
Query: 96 NAKYLDGWVIFVDPAKSREARP 117
+ K +DG + V A+ RE P
Sbjct: 63 HEKEIDGKTLAVSVARPREEGP 84
>gi|449282273|gb|EMC89133.1| Nucleolysin TIAR, partial [Columba livia]
Length = 378
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS T E +K AFAPFG++ ++V+ D ATG+SKG+GFVS+ + +AE A
Sbjct: 104 HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVH 163
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGFR 134
M ++L G I + A +PP P E ++ F
Sbjct: 164 MGGQWLGGRQIRTNWATR---KPPAPKSTQENNTKQLRFE 200
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++ G++ TD+ +++ F+PFGQ++ +V + KG+ FV +++ E A A +
Sbjct: 213 VYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSV 266
Query: 96 NAKYLDGWVI 105
N ++G V+
Sbjct: 267 NGTTIEGHVV 276
>gi|110597824|ref|ZP_01386107.1| RNA-binding region RNP-1 (RNA recognition motif) [Chlorobium
ferrooxidans DSM 13031]
gi|110340549|gb|EAT59032.1| RNA-binding region RNP-1 (RNA recognition motif) [Chlorobium
ferrooxidans DSM 13031]
Length = 90
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 48/88 (54%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ L T+ L+E F FG++ + VI D+ TGRSKGFGFV + EA A +
Sbjct: 3 IYIGNLDYSVTEADLRETFGEFGEVSSASVINDKFTGRSKGFGFVEMANDAEAASAIADL 62
Query: 96 NAKYLDGWVIFVDPAKSREARPPPPPPY 123
N L+G I V+ AK RE RP Y
Sbjct: 63 NDSDLNGRTIKVNEAKPREERPASRSRY 90
>gi|348523079|ref|XP_003449051.1| PREDICTED: nucleolin-like isoform 1 [Oreochromis niloticus]
Length = 700
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 50/76 (65%), Gaps = 3/76 (3%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
LFV GLS TT+E LK+AF V ++++TDR TG SKGFGFV +++ ++ + A+E M
Sbjct: 549 LFVKGLSEDTTEETLKDAFEG---AVAARIVTDRDTGSSKGFGFVDFSNEDDCKAAKEAM 605
Query: 96 NAKYLDGWVIFVDPAK 111
+DG + +D AK
Sbjct: 606 EDGEIDGSKVTLDYAK 621
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 14/99 (14%)
Query: 19 KSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRA---TGRSK 75
KS +G+ ++ S L V+ LS T+E L Q + K ++ R GR K
Sbjct: 450 KSHMGA---RASAASKTLVVNNLSFNATEEVL--------QSTFEKAVSIRIPQRDGRPK 498
Query: 76 GFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSRE 114
GF F+ + S ++A+ A E N ++G I ++ ++SR+
Sbjct: 499 GFAFLEFESTDDAKDALENFNNTEIEGRSIRLEYSQSRD 537
>gi|126273037|ref|XP_001367935.1| PREDICTED: nucleolysin TIAR isoform 3 [Monodelphis domestica]
Length = 385
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 57/105 (54%), Gaps = 5/105 (4%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS T E +K AFAPFG++ ++V+ D ATG+SKG+GFVS+ + +AE A
Sbjct: 111 HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVH 170
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGFRTNKTV 139
M ++L G I ++ A PP P Q+ S R V
Sbjct: 171 MGGQWLGGRQI-----RTNWATRKPPAPKSTQENSTKQLRFEDVV 210
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++ G++ TD+ +++ F+PFGQ++ +V + KG+ FV +++ E A A +
Sbjct: 220 VYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSV 273
Query: 96 NAKYLDGWVI 105
N ++G V+
Sbjct: 274 NGTTIEGHVV 283
>gi|71407577|ref|XP_806247.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70869937|gb|EAN84396.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 601
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 47/87 (54%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
LFVSGL TD +L + F P+G++ +KV+ D TG+S+G FV + + AE+A E
Sbjct: 238 NLFVSGLHASVTDNELYKHFHPYGEIESAKVMLDIHTGKSRGIAFVKFKEVANAEKAAEE 297
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPP 121
MN G I V AK A P P
Sbjct: 298 MNNSVFHGETIAVRVAKPHAAYRPGAP 324
>gi|218132093|ref|ZP_03460897.1| hypothetical protein BACEGG_03720 [Bacteroides eggerthii DSM 20697]
gi|317477123|ref|ZP_07936364.1| RNA recognition domain-containing protein [Bacteroides eggerthii
1_2_48FAA]
gi|217985743|gb|EEC52084.1| hypothetical protein BACEGG_03720 [Bacteroides eggerthii DSM 20697]
gi|316906666|gb|EFV28379.1| RNA recognition domain-containing protein [Bacteroides eggerthii
1_2_48FAA]
Length = 99
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 49/87 (56%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++SGLS + L FA FG++ +KVI DR TGRS+GF FV + E ++A + +
Sbjct: 3 IYISGLSYGINNADLTNLFAEFGEVSSAKVIFDRETGRSRGFAFVEMNNDTEGQKAIDEL 62
Query: 96 NAKYLDGWVIFVDPAKSREARPPPPPP 122
N D VI V A+ RE RP P
Sbjct: 63 NGVEYDNKVISVSVARPREERPSNGRP 89
>gi|71414344|ref|XP_809277.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70873635|gb|EAN87426.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 601
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 47/87 (54%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
LFVSGL TD +L + F P+G++ +KV+ D TG+S+G FV + + AE+A E
Sbjct: 238 NLFVSGLHASVTDNELYKHFHPYGEIESAKVMLDIHTGKSRGIAFVKFKEVANAEKAAEE 297
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPP 121
MN G I V AK A P P
Sbjct: 298 MNNSVFHGETIAVRVAKPHAAYRPGAP 324
>gi|1350820|sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, chloroplastic; AltName:
Full=CP-RBP30; Flags: Precursor
gi|19708|emb|CAA46234.1| RNA binding protein 30 [Nicotiana plumbaginifolia]
Length = 279
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 53/84 (63%), Gaps = 3/84 (3%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
R++V L+ + L+ F+ G++V +KV+ DR +GRS+GFGFV+Y+S EE A E
Sbjct: 195 RVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIES 254
Query: 95 MNAKYLDGWVIFVDPAKSREARPP 118
++ L+G I V PA EARPP
Sbjct: 255 LDGVDLNGRAIRVSPA---EARPP 275
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 48/102 (47%), Gaps = 12/102 (11%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
++FV L L E F G + +VI D+ TGRS+GFGFV+ +S EE E A +
Sbjct: 88 KIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGFRTN 136
N LDG + V+ PPP + S FR N
Sbjct: 148 FNGYELDGRALRVNSG---------PPPEKRENSS---FREN 177
>gi|348523085|ref|XP_003449054.1| PREDICTED: nucleolin-like isoform 4 [Oreochromis niloticus]
Length = 659
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 50/76 (65%), Gaps = 3/76 (3%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
LFV GLS TT+E LK+AF V ++++TDR TG SKGFGFV +++ ++ + A+E M
Sbjct: 508 LFVKGLSEDTTEETLKDAFEG---AVAARIVTDRDTGSSKGFGFVDFSNEDDCKAAKEAM 564
Query: 96 NAKYLDGWVIFVDPAK 111
+DG + +D AK
Sbjct: 565 EDGEIDGSKVTLDYAK 580
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 14/99 (14%)
Query: 19 KSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRA---TGRSK 75
KS +G+ ++ S L V+ LS T+E L Q + K ++ R GR K
Sbjct: 409 KSHMGA---RASAASKTLVVNNLSFNATEEVL--------QSTFEKAVSIRIPQRDGRPK 457
Query: 76 GFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSRE 114
GF F+ + S ++A+ A E N ++G I ++ ++SR+
Sbjct: 458 GFAFLEFESTDDAKDALENFNNTEIEGRSIRLEYSQSRD 496
>gi|301759213|ref|XP_002915456.1| PREDICTED: nucleolysin TIAR-like [Ailuropoda melanoleuca]
Length = 477
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 3/99 (3%)
Query: 35 RLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREG 94
+FV LS T E +K AFAPFG++ ++V+ D ATG+SKG+GFVS+ + +AE A
Sbjct: 200 HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVH 259
Query: 95 MNAKYLDGWVIFVDPAKSREARPPPPPPYPEQQPSEMGF 133
M ++L G I + A +PP P E ++ F
Sbjct: 260 MGGQWLGGRQIRTNWATR---KPPAPKSTQENNTKQLRF 295
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
++ G++ TD+ +++ F+PFGQ++ +V + KG+ FV +++ E A A +
Sbjct: 309 VYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSV 362
Query: 96 NAKYLDGWVI 105
N ++G V+
Sbjct: 363 NGTTIEGHVV 372
>gi|224060641|ref|XP_002193452.1| PREDICTED: nucleolin [Taeniopygia guttata]
Length = 692
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 53/81 (65%), Gaps = 3/81 (3%)
Query: 33 SPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAR 92
S LFV GLS TT+E L+E+F + ++++TDR TG SKGFGFV ++S E+A+ A+
Sbjct: 549 SKTLFVRGLSEDTTEETLRESFE---GSISARIVTDRDTGSSKGFGFVDFSSPEDAKAAK 605
Query: 93 EGMNAKYLDGWVIFVDPAKSR 113
E M +DG + +D AK +
Sbjct: 606 EAMEDGEIDGNKVTLDFAKPK 626
Score = 38.5 bits (88), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 24 SIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYT 83
S + N S L V+ LS T+E L+E F + S + GR KG+ FV +
Sbjct: 445 SQQENQKGESTTLIVNNLSYAATEETLQEVF----KKASSIRVPQNNQGRPKGYAFVDFA 500
Query: 84 SIEEAERAREGMNAKYLDGWVI 105
+ E+A+ A +N ++G I
Sbjct: 501 TAEDAKEALNSLNNTEIEGRTI 522
>gi|16198525|gb|AAH15944.1| TIA1 protein [Homo sapiens]
gi|119620232|gb|EAW99826.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_d [Homo sapiens]
gi|119620233|gb|EAW99827.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_d [Homo sapiens]
Length = 214
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 6 SFRRALSSGSSILKSQLGSIRYNSTLTSPRLFVSGLSRLTTDEKLKEAFAPFGQLVYSKV 65
S ++ +S S+++ +Q ++ +FV LS T E +K AFAPFG++ ++V
Sbjct: 85 SSQKKDTSSSTVVSTQRSQDHFH-------VFVGDLSPEITTEDIKAAFAPFGRISDARV 137
Query: 66 ITDRATGRSKGFGFVSYTSIEEAERAREGMNAKYLDGWVIFVDPAKSREARPPPPP 121
+ D ATG+SKG+GFVS+ + +AE A + M ++L G I + A R PP P
Sbjct: 138 VKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA----TRKPPAP 189
>gi|395526571|ref|XP_003765434.1| PREDICTED: polyadenylate-binding protein 4 [Sarcophilus harrisii]
Length = 630
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+++ DE+LKE F+ +G+ + KV+TD ++G+SKGFGFVS+ E+A +A E M
Sbjct: 193 VYIKNFGDDMDDERLKELFSKYGKTLSVKVMTD-SSGKSKGFGFVSFEKHEDANKAVEEM 251
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N K ++G ++FV A+ + R
Sbjct: 252 NGKDINGKMVFVGRAQKKVER 272
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L++ L DEKL++ F+PFG + +KV+ + GRSKGFGFV ++S +EA +A M
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVCFSSPDEATKAVTEM 353
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N + + ++V A+ +E R
Sbjct: 354 NGRIVGSKPLYVALAQRKEER 374
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
+F+ L + ++ L + F+ FG ++ KV+ D SKG+ FV + + + A+RA E M
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQDAADRAIEKM 158
Query: 96 NAKYLDGWVIFVDPAKSREAR 116
N L+ +FV KSR+ R
Sbjct: 159 NGMLLNDRKVFVGRFKSRKER 179
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
L+V L T+ L E F+P G ++ +V D T RS G+ +V++ +AERA + M
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 96 NAKYLDGWVIFV 107
N + G I +
Sbjct: 73 NFDVIKGKPIRI 84
>gi|357120144|ref|XP_003561789.1| PREDICTED: uncharacterized protein LOC100835076 [Brachypodium
distachyon]
Length = 356
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 55/88 (62%)
Query: 36 LFVSGLSRLTTDEKLKEAFAPFGQLVYSKVITDRATGRSKGFGFVSYTSIEEAERAREGM 95
LFV+GLS TD L++ F+ G+++ + ++ D T S+GFGFV+ +++EA+R + +
Sbjct: 52 LFVTGLSSRLTDRDLEKHFSTEGEVIDASIVLDPWTRESRGFGFVTMATLKEADRCIKYL 111
Query: 96 NAKYLDGWVIFVDPAKSREARPPPPPPY 123
+ L+G VI V+ AK R R P P Y
Sbjct: 112 DRSVLEGRVITVEKAKRRRGRNPTPGRY 139
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.131 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,364,940,855
Number of Sequences: 23463169
Number of extensions: 98214334
Number of successful extensions: 895408
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 17435
Number of HSP's successfully gapped in prelim test: 4222
Number of HSP's that attempted gapping in prelim test: 853673
Number of HSP's gapped (non-prelim): 40627
length of query: 143
length of database: 8,064,228,071
effective HSP length: 107
effective length of query: 36
effective length of database: 9,848,636,284
effective search space: 354550906224
effective search space used: 354550906224
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 71 (32.0 bits)