BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>032320
MAKFLVSYTWIQGAGQGRERDHTMIRCFAPVRSVHAFHNHTIRFVTPKLTANSSSSSLLS
TRREALTVSIVTTTLEILISSFSASSSAAAAAAAELLELPNSGGVKALDLRLGRGPVPVD
GDQVAIHYYGRLAAKQGWRFDST

High Scoring Gene Products

Symbol, full name Information P value
AT4G19830 protein from Arabidopsis thaliana 1.2e-19
P0669G09.14
Peptidyl-prolyl cis-trans isomerase
protein from Oryza sativa Japonica Group 2.0e-17
FKB16-8
Peptidyl-prolyl cis-trans isomerase
protein from Chlamydomonas reinhardtii 0.00064

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  032320
        (143 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2134035 - symbol:AT4G19830 "AT4G19830" species...   234  1.2e-19   1
UNIPROTKB|Q6H6D3 - symbol:P0669G09.14 "Peptidyl-prolyl ci...   213  2.0e-17   1
UNIPROTKB|A8JEI4 - symbol:FKB16-8 "Peptidyl-prolyl cis-tr...    88  0.00064   1


>TAIR|locus:2134035 [details] [associations]
            symbol:AT4G19830 "AT4G19830" species:3702 "Arabidopsis
            thaliana" [GO:0000413 "protein peptidyl-prolyl isomerization"
            evidence=IBA] [GO:0003755 "peptidyl-prolyl cis-trans isomerase
            activity" evidence=ISS;IBA] [GO:0005528 "FK506 binding"
            evidence=ISS;IBA] [GO:0006457 "protein folding" evidence=IEA]
            [GO:0009543 "chloroplast thylakoid lumen" evidence=ISS] [GO:0016020
            "membrane" evidence=IBA] [GO:0018208 "peptidyl-proline
            modification" evidence=IBA] InterPro:IPR001179 Pfam:PF00254
            PROSITE:PS50059 GO:GO:0006457 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0016020 EMBL:AL024486 EMBL:AL161551
            GO:GO:0003755 GO:GO:0009543 eggNOG:COG0545 HOGENOM:HOG000154887
            GO:GO:0005528 InterPro:IPR023566 PANTHER:PTHR10516 HSSP:P20081
            EMBL:AJ242482 EMBL:BT024613 EMBL:AK117814 IPI:IPI00547767
            PIR:T04764 RefSeq:NP_193718.1 UniGene:At.694
            ProteinModelPortal:O81864 SMR:O81864 STRING:O81864 PaxDb:O81864
            PRIDE:O81864 EnsemblPlants:AT4G19830.1 GeneID:827727
            KEGG:ath:AT4G19830 TAIR:At4g19830 InParanoid:O81864 OMA:EPLPPNF
            PhylomeDB:O81864 ProtClustDB:CLSN2685712 Genevestigator:O81864
            Uniprot:O81864
        Length = 229

 Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
 Identities = 54/132 (40%), Positives = 73/132 (55%)

Query:    24 MIRCFA--P------VRSVHAFHNHTIRFVTPKLTANXXXXXXXXT----RREALTVSIV 71
             MIRCFA  P      + +VH     ++R    + +A         T     R ++++SI+
Sbjct:     1 MIRCFAWTPLVGAPLITTVHFTSPPSLRIFASRSSAPSSSSSSSSTVAAASRRSISLSII 60

Query:    72 TTTLEILIXXXXXXXXXXXXXXXELLELPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGR 131
               T  ++                +  E+PNSGGVKALDLR+G G VP++GDQ+ IHYYGR
Sbjct:    61 AVTSSVV-----SSFCFSSPALADFSEIPNSGGVKALDLRIGDGDVPIEGDQIEIHYYGR 115

Query:   132 LAAKQGWRFDST 143
             LAAKQGWRFDST
Sbjct:   116 LAAKQGWRFDST 127


>UNIPROTKB|Q6H6D3 [details] [associations]
            symbol:P0669G09.14 "Peptidyl-prolyl cis-trans isomerase"
            species:39947 "Oryza sativa Japonica Group" [GO:0000413 "protein
            peptidyl-prolyl isomerization" evidence=ISS] [GO:0003755
            "peptidyl-prolyl cis-trans isomerase activity" evidence=ISS]
            [GO:0005528 "FK506 binding" evidence=ISS] [GO:0016020 "membrane"
            evidence=ISS] [GO:0018208 "peptidyl-proline modification"
            evidence=ISS] InterPro:IPR001179 Pfam:PF00254 PROSITE:PS50059
            GO:GO:0006457 GO:GO:0016020 InterPro:IPR006311 PROSITE:PS51318
            EMBL:AP008208 EMBL:CM000139 GO:GO:0003755 eggNOG:COG0545
            GO:GO:0005528 InterPro:IPR023566 PANTHER:PTHR10516 OMA:EPLPPNF
            ProtClustDB:CLSN2685712 EMBL:AP005071 EMBL:AK061562
            RefSeq:NP_001046016.1 UniGene:Os.51202 STRING:Q6H6D3
            EnsemblPlants:LOC_Os02g07220.1 GeneID:4328431 KEGG:osa:4328431
            Uniprot:Q6H6D3
        Length = 213

 Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
 Identities = 45/82 (54%), Positives = 48/82 (58%)

Query:    62 RREALTVSIVTTTLEILIXXXXXXXXXXXXXXXELLELPNSGGVKALDLRLGRGPVPVDG 121
             RR  L  S  +T     +                  E+P SGGVKALDLR G G VP DG
Sbjct:    36 RRHLLLASAAST-----LPAAAAAASASAAAAPSFAEIPGSGGVKALDLREGPGEVPADG 90

Query:   122 DQVAIHYYGRLAAKQGWRFDST 143
             DQVAIHYYGRLAAKQGWRFDST
Sbjct:    91 DQVAIHYYGRLAAKQGWRFDST 112


>UNIPROTKB|A8JEI4 [details] [associations]
            symbol:FKB16-8 "Peptidyl-prolyl cis-trans isomerase"
            species:3055 "Chlamydomonas reinhardtii" [GO:0000413 "protein
            peptidyl-prolyl isomerization" evidence=ISS] [GO:0003755
            "peptidyl-prolyl cis-trans isomerase activity" evidence=ISS]
            [GO:0005528 "FK506 binding" evidence=ISS] [GO:0016020 "membrane"
            evidence=ISS] [GO:0018208 "peptidyl-proline modification"
            evidence=ISS] InterPro:IPR001179 Pfam:PF00254 PROSITE:PS50059
            GO:GO:0006457 GO:GO:0016020 GO:GO:0003755 eggNOG:COG0545
            GO:GO:0005528 InterPro:IPR023566 PANTHER:PTHR10516 EMBL:DS496169
            RefSeq:XP_001701180.1 UniGene:Cre.1282 ProteinModelPortal:A8JEI4
            ProMEX:A8JEI4 EnsemblPlants:EDO97690 GeneID:5726763
            KEGG:cre:CHLREDRAFT_159842 ProtClustDB:CLSN2923599
            BioCyc:CHLAMY:CHLREDRAFT_159842-MONOMER Uniprot:A8JEI4
        Length = 181

 Score = 88 (36.0 bits), Expect = 0.00064, P = 0.00064
 Identities = 19/49 (38%), Positives = 27/49 (55%)

Query:    95 ELLELPNSGGVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDST 143
             + + LP+  G+K L +R G G  P  GD V +H+ G     QG R D+T
Sbjct:    23 DFVTLPS--GIKVLTIREGEGATPQPGDTVEVHWAGFTKGYQGKRIDNT 69


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.138   0.422    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      143       120   0.00091  102 3  11 22  0.45    30
                                                     29  0.48    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  580 (62 KB)
  Total size of DFA:  126 KB (2080 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  8.80u 0.21s 9.01t   Elapsed:  00:00:00
  Total cpu time:  8.80u 0.21s 9.01t   Elapsed:  00:00:00
  Start:  Sat May 11 01:25:56 2013   End:  Sat May 11 01:25:56 2013

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