BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032320
(143 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2KI3|A Chain A, Structural And Biochemical Characterization Of Fk506
Binding Domain From Plasmodium Vivax
pdb|3IHZ|A Chain A, Crystal Structure Of The Fk506 Binding Domain Of
Plasmodium Vivax Fkbp35 In Complex With Fk506
pdb|3IHZ|B Chain B, Crystal Structure Of The Fk506 Binding Domain Of
Plasmodium Vivax Fkbp35 In Complex With Fk506
pdb|3NI6|A Chain A, Crystal Structure Of The Fk506 Binding Domain Of
Plasmodium Vivax Fkbp35
pdb|3NI6|B Chain B, Crystal Structure Of The Fk506 Binding Domain Of
Plasmodium Vivax Fkbp35
pdb|3PA7|A Chain A, Crystal Structure Of Fkbp From Plasmodium Vivax In Complex
With Tetrapeptide Alpf
pdb|3PA7|B Chain B, Crystal Structure Of Fkbp From Plasmodium Vivax In Complex
With Tetrapeptide Alpf
Length = 126
Score = 32.7 bits (73), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 95 ELLELPNSGGVKALDLRLGRG---PVPVDGDQVAIHYYGRLAAKQGWRFDST 143
E + L GGV LR G G P G++V +HY G+L + G FDS+
Sbjct: 7 EQVHLTEDGGVVKTILRKGEGGEENAPKKGNEVTVHYVGKLES-SGKVFDSS 57
>pdb|1KT1|A Chain A, Structure Of The Large Fkbp-Like Protein, Fkbp51, Involved
In Steroid Receptor Complexes
Length = 457
Score = 32.3 bits (72), Expect = 0.088, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 104 GVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDST 143
GV + R+G G P+ GD+V +HY G+LA G +FDS+
Sbjct: 32 GVLKIVKRVGHGEETPMIGDRVYVHYNGKLA--NGKKFDSS 70
>pdb|3O5E|A Chain A, Fk1 Domain Of Fkbp51, Crystal Form Vi
pdb|3O5F|A Chain A, Fk1 Domain Of Fkbp51, Crystal Form Vii
Length = 144
Score = 31.6 bits (70), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 104 GVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDST 143
GV + R+G G P+ GD+V +HY G+L+ G +FDS+
Sbjct: 36 GVLKIVKRVGNGEETPMIGDKVYVHYKGKLS--NGKKFDSS 74
>pdb|4DRH|A Chain A, Co-crystal Structure Of The Ppiase Domain Of Fkbp51,
Rapamycin And The Frb Fragment Of Mtor At Low Ph
pdb|4DRH|D Chain D, Co-crystal Structure Of The Ppiase Domain Of Fkbp51,
Rapamycin And The Frb Fragment Of Mtor At Low Ph
pdb|4DRI|A Chain A, Co-crystal Structure Of The Ppiase Domain Of Fkbp51,
Rapamycin And The Frb Fragment Of Mtor
Length = 144
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 104 GVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDST 143
GV + R+G G P+ GD+V +HY G+L+ G +FDS+
Sbjct: 36 GVLKIVKRVGNGEETPMIGDKVYVHYKGKLS--NGKKFDSS 74
>pdb|1KT0|A Chain A, Structure Of The Large Fkbp-like Protein, Fkbp51, Involved
In Steroid Receptor Complexes
Length = 457
Score = 31.6 bits (70), Expect = 0.18, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 104 GVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDST 143
GV + R+G G P+ GD+V +HY G+L+ G +FDS+
Sbjct: 32 GVLKIVKRVGNGEETPMIGDKVYVHYKGKLS--NGKKFDSS 70
>pdb|3O5L|A Chain A, Fk1 Domain Mutant A19t Of Fkbp51, Crystal Form I
pdb|3O5M|A Chain A, Fk1 Domain Mutant A19t Of Fkbp51, Crystal Form Ii
pdb|3O5M|B Chain B, Fk1 Domain Mutant A19t Of Fkbp51, Crystal Form Ii
pdb|3O5O|A Chain A, Fk1 Domain Mutant A19t Of Fkbp51, Crystal Form Iii
pdb|3O5P|A Chain A, Fk1 Domain Mutant A19t Of Fkbp51, Crystal Form Iv
pdb|3O5Q|A Chain A, Fk1 Domain Mutant A19t Of Fkbp51, Crystal Form Iv, In
Presence Of Dmso
pdb|3O5R|A Chain A, Complex Of Fk506 With The Fk1 Domain Mutant A19t Of Fkbp51
pdb|4DRQ|A Chain A, Exploration Of Pipecolate Sulfonamides As Binders Of The
Fk506-Binding Proteins 51 And 52: Complex Of Fkbp51 With
2-(3-((R)-1-((S)-1-(3,5-
Dichlorophenylsulfonyl)piperidine-2-Carbonyloxy)-3-(3,
4-Dimethoxy - Phenyl)propyl)phenoxy)acetic Acid
pdb|4DRK|A Chain A, Evaluation Of Synthetic Fk506 Analogs As Ligands For
Fkbp51 And Fkbp52: Complex Of Fkbp51 With
{3-[(1r)-3-(3,4-Dimethoxyphenyl)-1-
({[(2s)-1-(3,
3-Dimethyl-2-Oxopentanoyl)piperidin-2-Yl]carbonyl}oxy)
Propyl]phenoxy}acetic Acid
pdb|4DRK|B Chain B, Evaluation Of Synthetic Fk506 Analogs As Ligands For
Fkbp51 And Fkbp52: Complex Of Fkbp51 With
{3-[(1r)-3-(3,4-Dimethoxyphenyl)-1-
({[(2s)-1-(3,
3-Dimethyl-2-Oxopentanoyl)piperidin-2-Yl]carbonyl}oxy)
Propyl]phenoxy}acetic Acid
pdb|4DRM|A Chain A, Evaluation Of Synthetic Fk506 Analogs As Ligands For
Fkbp51 And Fkbp52: Complex Of Fkbp51 With
{3-[(1r)-3-(3,4-Dimethoxyphenyl)-1-
({[(2s)-1-{[(1s,2r)-2-Ethyl-1-Hydroxycyclohexyl](Oxo)
Acetyl}piperidin-2-Yl]carbonyl}oxy)propyl]phenoxy}acetic
Acid
pdb|4DRN|A Chain A, Evaluation Of Synthetic Fk506 Analogs As Ligands For
Fkbp51 And Fkbp52: Complex Of Fkbp51 With
{3-[(1r)-3-(3,4-Dimethoxyphenyl)-1-
({[(2s)-1-{[(1s,2r)-2-Ethyl-1-Hydroxycyclohexyl](Oxo)
Acetyl}piperidin-2-Yl]carbonyl}oxy)propyl]phenoxy}acetic
Acid
pdb|4DRO|A Chain A, Evaluation Of Synthetic Fk506 Analogs As Ligands For
Fkbp51 And Fkbp52: Complex Of Fkbp51 With
(1r)-3-(3,4-Dimethoxyphenyl)-1- Phenylpropyl
(2s)-1-{[(1r,2s)-2-Ethyl-1-Hydroxycyclohexyl](Oxo)
Acetyl}piperidine-2-Carboxylate
pdb|4DRP|A Chain A, Evaluation Of Synthetic Fk506 Analogs As Ligands For The
Fk506-Binding Proteins 51 And 52: Complex Of Fkbp51 With
2-(3-((R)-3-(3,4-
Dimethoxyphenyl)-1-((S)-1-(2-((1r,
2s)-2-Ethyl-1-Hydroxy-Cyclohexyl)-
2-Oxoacetyl)piperidine-2-
Carbonyloxy)propyl)phenoxy)acetic Acid From
Cocrystallization
Length = 128
Score = 31.2 bits (69), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 104 GVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDST 143
GV + R+G G P+ GD+V +HY G+L+ G +FDS+
Sbjct: 20 GVLKIVKRVGNGEETPMIGDKVYVHYKGKLS--NGKKFDSS 58
>pdb|3O5G|A Chain A, Fk1 Domain Of Fkbp51, Crystal Form I
pdb|3O5I|A Chain A, Fk1 Domain Of Fkbp51, Crystal Form Ii
pdb|3O5I|B Chain B, Fk1 Domain Of Fkbp51, Crystal Form Ii
pdb|3O5J|A Chain A, Fk1 Domain Of Fkbp51, Crystal Form Iii
pdb|3O5K|A Chain A, Fk1 Domain Of Fkbp51, Crystal Form Viii
pdb|3O5K|B Chain B, Fk1 Domain Of Fkbp51, Crystal Form Viii
pdb|3O5K|C Chain C, Fk1 Domain Of Fkbp51, Crystal Form Viii
pdb|3O5K|D Chain D, Fk1 Domain Of Fkbp51, Crystal Form Viii
Length = 128
Score = 31.2 bits (69), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 104 GVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDST 143
GV + R+G G P+ GD+V +HY G+L+ G +FDS+
Sbjct: 20 GVLKIVKRVGNGEETPMIGDKVYVHYKGKLS--NGKKFDSS 58
>pdb|3O5D|A Chain A, Crystal Structure Of A Fragment Of Fkbp51 Comprising The
Fk1 And Fk2 Domains
pdb|3O5D|B Chain B, Crystal Structure Of A Fragment Of Fkbp51 Comprising The
Fk1 And Fk2 Domains
Length = 264
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 104 GVKALDLRLGRGP-VPVDGDQVAIHYYGRLAAKQGWRFDST 143
GV + R+G G P+ GD+V +HY G+L+ G +FDS+
Sbjct: 36 GVLKIVKRVGNGEETPMIGDKVYVHYKGKLS--NGKKFDSS 74
>pdb|2VN1|A Chain A, Crystal Structure Of The Fk506-Binding Domain Of
Plasmodium Falciparum Fkbp35 In Complex With Fk506
pdb|2VN1|B Chain B, Crystal Structure Of The Fk506-Binding Domain Of
Plasmodium Falciparum Fkbp35 In Complex With Fk506
Length = 129
Score = 30.8 bits (68), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Query: 95 ELLELPNSGGVKALDLRLG---RGPVPVDGDQVAIHYYGRLAAKQGWRFDST 143
E +EL GGV L+ G +P G++V +HY G+L + G FDS+
Sbjct: 8 EKVELTADGGVIKTILKKGDEGEENIPKKGNEVTVHYVGKLES-TGKVFDSS 58
>pdb|2OFN|A Chain A, Solution Structure Of Fk506-Binding Domain (Fkbd)of Fkbp35
From Plasmodium Falciparum
Length = 135
Score = 30.8 bits (68), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Query: 95 ELLELPNSGGVKALDLRLG---RGPVPVDGDQVAIHYYGRLAAKQGWRFDST 143
E +EL GGV L+ G +P G++V +HY G+L + G FDS+
Sbjct: 8 EKVELTADGGVIKTILKKGDEGEENIPKKGNEVTVHYVGKLES-TGKVFDSS 58
>pdb|1Q6H|A Chain A, Crystal Structure Of A Truncated Form Of Fkpa From
Escherichia Coli
pdb|1Q6H|B Chain B, Crystal Structure Of A Truncated Form Of Fkpa From
Escherichia Coli
pdb|1Q6I|A Chain A, Crystal Structure Of A Truncated Form Of Fkpa From
Escherichia Coli, In Complex With Immunosuppressant
Fk506
pdb|1Q6I|B Chain B, Crystal Structure Of A Truncated Form Of Fkpa From
Escherichia Coli, In Complex With Immunosuppressant
Fk506
Length = 224
Score = 26.9 bits (58), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 110 LRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDST 143
+ G+G P D D V ++Y G L G FD++
Sbjct: 128 VEAGKGEAPKDSDTVVVNYKGTLI--DGKEFDNS 159
>pdb|1Q6U|A Chain A, Crystal Structure Of Fkpa From Escherichia Coli
Length = 245
Score = 26.6 bits (57), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 110 LRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDST 143
+ G+G P D D V ++Y G L G FD++
Sbjct: 128 VEAGKGEAPKDSDTVVVNYKGTLI--DGKEFDNS 159
>pdb|1U79|A Chain A, Crystal Structure Of Atfkbp13
pdb|1U79|B Chain B, Crystal Structure Of Atfkbp13
pdb|1U79|C Chain C, Crystal Structure Of Atfkbp13
pdb|1U79|D Chain D, Crystal Structure Of Atfkbp13
pdb|1U79|E Chain E, Crystal Structure Of Atfkbp13
pdb|1Y0O|A Chain A, Crystal Structure Of Reduced Atfkbp13
pdb|1Y0O|B Chain B, Crystal Structure Of Reduced Atfkbp13
pdb|1Y0O|C Chain C, Crystal Structure Of Reduced Atfkbp13
pdb|1Y0O|D Chain D, Crystal Structure Of Reduced Atfkbp13
pdb|1Y0O|E Chain E, Crystal Structure Of Reduced Atfkbp13
Length = 129
Score = 26.6 bits (57), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 104 GVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDST 143
G+ D +G GP V G + HY G+L + G FDS+
Sbjct: 13 GLAFCDKVVGYGPEAVKGQLIKAHYVGKL--ENGKVFDSS 50
>pdb|3UF8|A Chain A, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase With A G95a Surface Mutation From
Burkholderia Pseudomallei Complexed With Fk506
Length = 209
Score = 26.6 bits (57), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 104 GVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDST 143
G+K DL G G G V++HY G L G +FDS+
Sbjct: 105 GLKYEDLTEGSGAEARAGQTVSVHYTGWLT--DGQKFDSS 142
>pdb|4GGQ|C Chain C, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase From Burkholderia Pseudomallei
Complexed With Cj40
pdb|4GGQ|A Chain A, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase From Burkholderia Pseudomallei
Complexed With Cj40
pdb|4GGQ|B Chain B, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase From Burkholderia Pseudomallei
Complexed With Cj40
pdb|4GGQ|D Chain D, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase From Burkholderia Pseudomallei
Complexed With Cj40
Length = 209
Score = 26.6 bits (57), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 104 GVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDST 143
G+K DL G G G V++HY G L G +FDS+
Sbjct: 105 GLKYEDLTEGSGAEARAGQTVSVHYTGWLT--DGQKFDSS 142
>pdb|4DZ2|A Chain A, Crystal Structure Of A Peptidyl-Prolyl Cis-Trans Isomerase
With Surface Mutation R92g From Burkholderia
Pseudomallei Complexed With Fk506
pdb|4DZ2|B Chain B, Crystal Structure Of A Peptidyl-Prolyl Cis-Trans Isomerase
With Surface Mutation R92g From Burkholderia
Pseudomallei Complexed With Fk506
Length = 113
Score = 26.6 bits (57), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 104 GVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDST 143
G+K DL G G G V++HY G L Q +FDS+
Sbjct: 9 GLKYEDLTEGSGAEARAGQTVSVHYTGWLTDGQ--KFDSS 46
>pdb|3VAW|A Chain A, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase With Surface Mutation V3i From
Burkholderia Pseudomallei Complexed With Fk506
Length = 209
Score = 26.6 bits (57), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 104 GVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDST 143
G+K DL G G G V++HY G L G +FDS+
Sbjct: 105 GLKYEDLTEGSGAEARAGQTVSVHYTGWLT--DGQKFDSS 142
>pdb|3UQA|A Chain A, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase With Surface Mutation A54e From
Burkholderia Pseudomallei Complexed With Fk506
Length = 209
Score = 26.2 bits (56), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 104 GVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDST 143
G+K DL G G G V++HY G L G +FDS+
Sbjct: 105 GLKYEDLTEGSGAEARAGQTVSVHYTGWLT--DGQKFDSS 142
>pdb|1YAT|A Chain A, Improved Calcineurin Inhibition By Yeast Fkbp12-Drug
Complexes. Crystallographic And Functional Analysis
Length = 113
Score = 26.2 bits (56), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Query: 118 PVDGDQVAIHYYGRLAAKQGWRFDST 143
P GD V IHY G L + G +FDS+
Sbjct: 22 PKTGDLVTIHYTGTL--ENGQKFDSS 45
>pdb|4DZ3|A Chain A, Crystal Structure Of A Peptidyl-Prolyl Cis-Trans Isomerase
With Surface Mutation M61h From Burkholderia
Pseudomallei Complexed With Fk506
pdb|4DZ3|B Chain B, Crystal Structure Of A Peptidyl-Prolyl Cis-Trans Isomerase
With Surface Mutation M61h From Burkholderia
Pseudomallei Complexed With Fk506
Length = 113
Score = 26.2 bits (56), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 104 GVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDST 143
G+K DL G G G V++HY G L Q +FDS+
Sbjct: 9 GLKYEDLTEGSGAEARAGQTVSVHYTGWLTDGQ--KFDSS 46
>pdb|2Y78|A Chain A, Crystal Structure Of Bpss1823, A Mip-Like Chaperone From
Burkholderia Pseudomallei
Length = 133
Score = 25.8 bits (55), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 104 GVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDST 143
G+K DL G G G V++HY G L Q +FDS+
Sbjct: 29 GLKYEDLTEGSGAEARAGQTVSVHYTGWLTDGQ--KFDSS 66
>pdb|2KE0|A Chain A, Solution Structure Of Peptidyl-Prolyl Cis-Trans Isomerase
From Burkholderia Pseudomallei
pdb|2KO7|A Chain A, Solution Structure Of Peptidyl-Prolyl Cis-Trans Isomerase
From Burkholderia Pseudomallei Complexed With
Cycloheximide-N- Ethylethanoate
pdb|2L2S|A Chain A, Solution Structure Of Peptidyl-Prolyl Cis-Trans Isomerase
From Burkholderia Pseudomallei Complexed With
1-{[(4-Methylphenyl) Thio]acetyl}piperidine
Length = 117
Score = 25.8 bits (55), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 104 GVKALDLRLGRGPVPVDGDQVAIHYYGRLAAKQGWRFDST 143
G+K DL G G G V++HY G L Q +FDS+
Sbjct: 13 GLKYEDLTEGSGAEARAGQTVSVHYTGWLTDGQ--KFDSS 50
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.138 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,489,321
Number of Sequences: 62578
Number of extensions: 102018
Number of successful extensions: 262
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 262
Number of HSP's gapped (non-prelim): 28
length of query: 143
length of database: 14,973,337
effective HSP length: 89
effective length of query: 54
effective length of database: 9,403,895
effective search space: 507810330
effective search space used: 507810330
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 46 (22.3 bits)