BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>032322
MAEEQVKKVEAETPAAPAPAPALAPAPAPAVPNNDVAEEKAVTQLHDQEKPVDDSKALAV
VDQTPDSAKKKISGEKKISGSHDRDVALAEVEKEKRESFIKAWEESEKTKAENKAQKKLS
AVAAWENSKKASLEAKLKKIEVT

High Scoring Gene Products

Symbol, full name Information P value
P93788
Remorin
protein from Solanum tuberosum 2.1e-18
AT3G61260 protein from Arabidopsis thaliana 1.4e-16
AT2G45820 protein from Arabidopsis thaliana 2.3e-16
AT3G48940 protein from Arabidopsis thaliana 3.1e-12
AT5G23750 protein from Arabidopsis thaliana 6.4e-12
AT4G00670 protein from Arabidopsis thaliana 0.00072

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  032322
        (143 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

UNIPROTKB|P93788 - symbol:P93788 "Remorin" species:4113 "...   204  2.1e-18   2
TAIR|locus:2098921 - symbol:AT3G61260 species:3702 "Arabi...   205  1.4e-16   1
TAIR|locus:2050704 - symbol:AT2G45820 "AT2G45820" species...   203  2.3e-16   1
TAIR|locus:2101303 - symbol:AT3G48940 "AT3G48940" species...   164  3.1e-12   1
TAIR|locus:2172793 - symbol:AT5G23750 "AT5G23750" species...   161  6.4e-12   1
TAIR|locus:2127058 - symbol:AT4G00670 "AT4G00670" species...    85  0.00072   1


>UNIPROTKB|P93788 [details] [associations]
            symbol:P93788 "Remorin" species:4113 "Solanum tuberosum"
            [GO:0005886 "plasma membrane" evidence=IDA] [GO:0007267 "cell-cell
            signaling" evidence=NAS] [GO:0048032 "galacturonate binding"
            evidence=IDA] Pfam:PF03763 Pfam:PF03766 GO:GO:0005886 GO:GO:0006810
            GO:GO:0007267 InterPro:IPR005516 InterPro:IPR005518 EMBL:U72489
            PIR:T07780 KEGG:dosa:Os10t0503800-01 GO:GO:0048032 Uniprot:P93788
        Length = 198

 Score = 204 (76.9 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
 Identities = 51/99 (51%), Positives = 61/99 (61%)

Query:    36 VAEEKAVTQ------LHDQEKPVDDSKALAVVD-QTPDXXXXXXXXXXXXXXXHDRDVAL 88
             VA+EKA+          ++EKP DDSKAL VV+ + P+                DRD  L
Sbjct:    29 VADEKAIVAPALPPPAEEKEKP-DDSKALVVVETKAPEPADEKKEGSI------DRDAVL 81

Query:    89 AEVEKEKRESFIKAWEESEKTKAENKAQKKLSAVAAWEN 127
             A V  EKR S IKAWEESEK+KAENKAQKK+SA+ AWEN
Sbjct:    82 ARVATEKRVSLIKAWEESEKSKAENKAQKKVSAIGAWEN 120

 Score = 32 (16.3 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
 Identities = 7/10 (70%), Positives = 8/10 (80%)

Query:     1 MAEEQVKKVE 10
             MAE + KKVE
Sbjct:     1 MAELEAKKVE 10


>TAIR|locus:2098921 [details] [associations]
            symbol:AT3G61260 species:3702 "Arabidopsis thaliana"
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0005886 "plasma membrane"
            evidence=IDA] [GO:0005773 "vacuole" evidence=IDA] [GO:0009506
            "plasmodesma" evidence=IDA] Pfam:PF03763 Pfam:PF03766 GO:GO:0005886
            GO:GO:0009506 GO:GO:0005773 EMBL:CP002686 GenomeReviews:BA000014_GR
            EMBL:AL137898 HOGENOM:HOG000239299 ProtClustDB:CLSN2683444
            InterPro:IPR005516 InterPro:IPR005518 EMBL:AF370346 EMBL:AY062977
            EMBL:AY088061 IPI:IPI00539947 PIR:T47918 RefSeq:NP_191685.1
            UniGene:At.21524 IntAct:Q9M2D8 STRING:Q9M2D8 PaxDb:Q9M2D8
            PRIDE:Q9M2D8 EnsemblPlants:AT3G61260.1 GeneID:825298
            KEGG:ath:AT3G61260 TAIR:At3g61260 eggNOG:NOG252013
            InParanoid:Q9M2D8 OMA:IADVHAW PhylomeDB:Q9M2D8
            Genevestigator:Q9M2D8 Uniprot:Q9M2D8
        Length = 212

 Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
 Identities = 48/93 (51%), Positives = 60/93 (64%)

Query:    35 DVAEEKAVTQLHDQEKPVDDSKALAVVDQTPDXXXXXXXXXXXXXXXHDRDVALAEVEKE 94
             DVAEEK   Q    E+  DDSKAL VV++  +                DRDV LA++ KE
Sbjct:    48 DVAEEKI--QNPPPEQIFDDSKALTVVEKPVEEPAPAKPASASL----DRDVKLADLSKE 101

Query:    95 KRESFIKAWEESEKTKAENKAQKKLSAVAAWEN 127
             KR SF++AWEESEK+KAENKA+KK++ V AWEN
Sbjct:   102 KRLSFVRAWEESEKSKAENKAEKKIADVHAWEN 134


>TAIR|locus:2050704 [details] [associations]
            symbol:AT2G45820 "AT2G45820" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005886
            "plasma membrane" evidence=ISM;IDA] [GO:0008150
            "biological_process" evidence=ND] [GO:0005515 "protein binding"
            evidence=IPI] Pfam:PF03763 Pfam:PF03766 GO:GO:0005886 EMBL:CP002685
            GenomeReviews:CT485783_GR EMBL:AC004665 EMBL:M25268 EMBL:AY045996
            EMBL:AY079329 IPI:IPI00539171 PIR:T02465 RefSeq:NP_182106.1
            UniGene:At.24530 IntAct:O80837 STRING:O80837 PaxDb:O80837
            PRIDE:O80837 ProMEX:O80837 EnsemblPlants:AT2G45820.1 GeneID:819190
            KEGG:ath:AT2G45820 TAIR:At2g45820 eggNOG:NOG288404
            HOGENOM:HOG000239299 InParanoid:O80837 OMA:AILSWEN PhylomeDB:O80837
            ProtClustDB:CLSN2683444 Genevestigator:O80837 InterPro:IPR005516
            InterPro:IPR005518 Uniprot:O80837
        Length = 190

 Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
 Identities = 49/93 (52%), Positives = 63/93 (67%)

Query:    35 DVAEEKAVTQLHDQEKPVDDSKALAVVDQTPDXXXXXXXXXXXXXXXHDRDVALAEVEKE 94
             +VA+EK    +H+   PV+ SKALAVV++  +                DRDV LA++EKE
Sbjct:    30 EVADEK----IHNPP-PVE-SKALAVVEKPIEEHTPKKASSGSA----DRDVILADLEKE 79

Query:    95 KRESFIKAWEESEKTKAENKAQKKLSAVAAWEN 127
             K+ SFIKAWEESEK+KAEN+AQKK+S V AWEN
Sbjct:    80 KKTSFIKAWEESEKSKAENRAQKKISDVHAWEN 112


>TAIR|locus:2101303 [details] [associations]
            symbol:AT3G48940 "AT3G48940" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005886
            "plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0048765 "root hair cell differentiation"
            evidence=RCA] Pfam:PF03763 Pfam:PF03766 EMBL:CP002686
            GenomeReviews:BA000014_GR EMBL:AL132967 HOGENOM:HOG000239299
            InterPro:IPR005516 InterPro:IPR005518 IPI:IPI00526150 PIR:T46136
            RefSeq:NP_190463.1 UniGene:At.53841 EnsemblPlants:AT3G48940.1
            GeneID:824055 KEGG:ath:AT3G48940 TAIR:At3g48940 eggNOG:NOG272280
            InParanoid:Q9SMT2 OMA:GAWENSK PhylomeDB:Q9SMT2
            ProtClustDB:CLSN2913484 Genevestigator:Q9SMT2 Uniprot:Q9SMT2
        Length = 175

 Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
 Identities = 37/80 (46%), Positives = 49/80 (61%)

Query:    48 QEKPVDDSKALAVVDQTPDXXXXXXXXXXXXXXXHDRDVALAEVEKEKRESFIKAWEESE 107
             +E+  DDSKA+ +V    +               H RD  L  +E++KR S IKAWEE+E
Sbjct:    24 KEEKSDDSKAIVLVVAAKEPTEDKKVGSV-----H-RDAVLVRLEQDKRISLIKAWEEAE 77

Query:   108 KTKAENKAQKKLSAVAAWEN 127
             K+K ENKAQKK+S+V AWEN
Sbjct:    78 KSKVENKAQKKISSVGAWEN 97


>TAIR|locus:2172793 [details] [associations]
            symbol:AT5G23750 "AT5G23750" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0042546 "cell wall biogenesis" evidence=RCA]
            Pfam:PF03763 Pfam:PF03766 EMBL:CP002688 EMBL:AB005244
            InterPro:IPR005516 InterPro:IPR005518 EMBL:AF387006 EMBL:BT000016
            IPI:IPI00519664 RefSeq:NP_197764.1 UniGene:At.22829 IntAct:Q9FFA5
            PRIDE:Q9FFA5 EnsemblPlants:AT5G23750.1 GeneID:832440
            KEGG:ath:AT5G23750 TAIR:At5g23750 InParanoid:Q9FFA5 OMA:CKVENKA
            PhylomeDB:Q9FFA5 ProtClustDB:CLSN2686297 ArrayExpress:Q9FFA5
            Genevestigator:Q9FFA5 Uniprot:Q9FFA5
        Length = 202

 Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
 Identities = 30/45 (66%), Positives = 36/45 (80%)

Query:    83 DRDVALAEVEKEKRESFIKAWEESEKTKAENKAQKKLSAVAAWEN 127
             +RD  LA VE EKR S IKAWEE+EK K ENKA+KKLS++ +WEN
Sbjct:    80 NRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWEN 124


>TAIR|locus:2127058 [details] [associations]
            symbol:AT4G00670 "AT4G00670" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005886
            "plasma membrane" evidence=ISM] Pfam:PF03763 EMBL:CP002687
            GenomeReviews:CT486007_GR InterPro:IPR005516 UniGene:At.25593
            EMBL:BT014759 EMBL:BT015948 IPI:IPI00526954 RefSeq:NP_191976.2
            UniGene:At.48814 PaxDb:Q6IDB4 PRIDE:Q6IDB4
            EnsemblPlants:AT4G00670.1 GeneID:828034 KEGG:ath:AT4G00670
            TAIR:At4g00670 OMA:KISHEAK PhylomeDB:Q6IDB4 Genevestigator:Q6IDB4
            Uniprot:Q6IDB4
        Length = 123

 Score = 85 (35.0 bits), Expect = 0.00073, P = 0.00072
 Identities = 15/33 (45%), Positives = 22/33 (66%)

Query:    94 EKRESFIKAWEESEKTKAENKAQKKLSAVAAWE 126
             +++   IKAW+E + TK  NK QKKL  ++ WE
Sbjct:    11 DEQSKVIKAWKELKITKVNNKTQKKLLDISGWE 43


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.300   0.116   0.301    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      143        95   0.00091  102 3  10 24  0.37    31
                                                     29  0.43    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  576 (61 KB)
  Total size of DFA:  143 KB (2087 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.10u 0.16s 15.26t   Elapsed:  00:00:01
  Total cpu time:  15.10u 0.16s 15.26t   Elapsed:  00:00:01
  Start:  Sat May 11 01:28:13 2013   End:  Sat May 11 01:28:14 2013

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