BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 032322
         (143 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P93788|REMO_SOLTU Remorin OS=Solanum tuberosum PE=1 SV=1
          Length = 198

 Score =  115 bits (287), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/148 (54%), Positives = 97/148 (65%), Gaps = 21/148 (14%)

Query: 1   MAEEQVKKVEAETPAAPAPAPALAPAPAPAVPNNDVAEEKAVTQ------LHDQEKPVDD 54
           MAE + KKVE   PA PAP P  AP          VA+EKA+          ++EKP DD
Sbjct: 1   MAELEAKKVEIVDPAPPAPGPVEAP-------KEVVADEKAIVAPALPPPAEEKEKP-DD 52

Query: 55  SKALAVVD-QTPDSAKKKISGEKKISGSHDRDVALAEVEKEKRESFIKAWEESEKTKAEN 113
           SKAL VV+ + P+ A      ++K  GS DRD  LA V  EKR S IKAWEESEK+KAEN
Sbjct: 53  SKALVVVETKAPEPA------DEKKEGSIDRDAVLARVATEKRVSLIKAWEESEKSKAEN 106

Query: 114 KAQKKLSAVAAWENSKKASLEAKLKKIE 141
           KAQKK+SA+ AWENSKKA+LEA+LKK+E
Sbjct: 107 KAQKKVSAIGAWENSKKANLEAELKKME 134


>sp|O80837|REMO_ARATH Remorin OS=Arabidopsis thaliana GN=DBP PE=1 SV=1
          Length = 190

 Score =  108 bits (270), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 76/139 (54%), Positives = 96/139 (69%), Gaps = 17/139 (12%)

Query: 1   MAEEQ-VKKVEAETPAAPAPAPALAPAPAPAVPNNDVAEEKAVTQLHDQEKPVDDSKALA 59
           MAEEQ   KV+ E+PA  APA    PAP       +VA+EK    +H+   P  +SKALA
Sbjct: 1   MAEEQKTSKVDVESPAVLAPAKEPTPAPV------EVADEK----IHNP--PPVESKALA 48

Query: 60  VVDQTPDSAKKKISGEKKISGSHDRDVALAEVEKEKRESFIKAWEESEKTKAENKAQKKL 119
           VV++  +    K    K  SGS DRDV LA++EKEK+ SFIKAWEESEK+KAEN+AQKK+
Sbjct: 49  VVEKPIEEHTPK----KASSGSADRDVILADLEKEKKTSFIKAWEESEKSKAENRAQKKI 104

Query: 120 SAVAAWENSKKASLEAKLK 138
           S V AWENSKKA++EA+L+
Sbjct: 105 SDVHAWENSKKAAVEAQLR 123


>sp|Q9M2D8|Y3126_ARATH Uncharacterized protein At3g61260 OS=Arabidopsis thaliana
           GN=At3g61260 PE=1 SV=1
          Length = 212

 Score = 95.5 bits (236), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 62/107 (57%), Positives = 78/107 (72%), Gaps = 6/107 (5%)

Query: 35  DVAEEKAVTQLHDQEKPVDDSKALAVVDQTPDSAKKKISGEKKISGSHDRDVALAEVEKE 94
           DVAEEK   Q    E+  DDSKAL VV++  +      +  K  S S DRDV LA++ KE
Sbjct: 48  DVAEEK--IQNPPPEQIFDDSKALTVVEKPVEEP----APAKPASASLDRDVKLADLSKE 101

Query: 95  KRESFIKAWEESEKTKAENKAQKKLSAVAAWENSKKASLEAKLKKIE 141
           KR SF++AWEESEK+KAENKA+KK++ V AWENSKKA++EA+LKKIE
Sbjct: 102 KRLSFVRAWEESEKSKAENKAEKKIADVHAWENSKKAAVEAQLKKIE 148


>sp|Q73J26|HFLX_TREDE GTPase HflX OS=Treponema denticola (strain ATCC 35405 / CIP 103919
           / DSM 14222) GN=hflX PE=3 SV=1
          Length = 391

 Score = 31.6 bits (70), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 2/70 (2%)

Query: 73  SGEKKISGSHDRDVALAEVEKEKRESFIKAWEESEKTKAENKAQKKLSAVAAWENSKKAS 132
           +GEKK+    DR     E+ K K+E      + SE+ K      KK+ A+  + N+ K+S
Sbjct: 179 AGEKKLE--LDRRRLKTEITKLKKEVERVRLQRSEQRKTRLNGDKKIGAIVGYTNAGKSS 236

Query: 133 LEAKLKKIEV 142
           L  KL   EV
Sbjct: 237 LLKKLSGAEV 246


>sp|Q20497|MED12_CAEEL Mediator of RNA polymerase II transcription subunit 12
           OS=Caenorhabditis elegans GN=dpy-22 PE=1 SV=2
          Length = 3498

 Score = 31.6 bits (70), Expect = 1.7,   Method: Composition-based stats.
 Identities = 35/110 (31%), Positives = 52/110 (47%), Gaps = 12/110 (10%)

Query: 28  APAVPNNDVAEEKAVTQLHDQEKP-VDDSKALAVVD----QTPDSAKKKISGEKKISGSH 82
           AP V  ++   E  +  +   +K   DD   +AVVD    QTP+S KKK  GE++   + 
Sbjct: 695 APEVDKSEKEHEDDIMIIESNKKADEDDCVVIAVVDPDQEQTPESEKKK-DGEEERDKNK 753

Query: 83  DRDVALAEVEKEKRESFIKAWEESEKTKAENKAQKKLSAVAAWENSKKAS 132
           D DVA  E EK      I   EE  + K   + + K++ +A+    K  S
Sbjct: 754 DTDVADNEPEK------IYTDEELAEIKIRKEKEMKIATLASHIKEKMVS 797


>sp|Q4WM32|EXO84_ASPFU Exocyst complex component exo84 OS=Neosartorya fumigata (strain
           ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
           GN=exo84 PE=3 SV=1
          Length = 683

 Score = 29.3 bits (64), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 6/110 (5%)

Query: 14  PAAPAPAPALAPAPAPAVPNNDVAE--EKAVTQLHDQEKPVDDSKALAVVDQTPDSAKKK 71
           PAA +    L P  A   P++D +   +  +  L D   PVD S  LA  + T +  ++ 
Sbjct: 88  PAAASKYGGLGPPEASKKPSSDSSGPPQVDLNALRDPSLPVDRSNLLA--NATEEEIEEY 145

Query: 72  ISGEKKISGSHDRDVALAEVEKEKRESFIKAWEESEKTKAENKAQKKLSA 121
            +  +K+      D  L +   + R  FIK  +E+EK K E +  + L A
Sbjct: 146 QNNLRKVRNRTSTD--LQQNVYQNRTQFIKISKEAEKLKGEMRTLRTLMA 193


>sp|Q870C4|ATPF_PARBR ATP synthase subunit 4, mitochondrial OS=Paracoccidioides
           brasiliensis GN=ATP4 PE=2 SV=1
          Length = 244

 Score = 29.3 bits (64), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 8/119 (6%)

Query: 12  ETPAAPAPAPALAPAPAPAVPNNDVAEEKAVTQLHDQEKPVDDSKALAVVDQTPDSAKKK 71
           ET AA       A     A P   + +E A TQ+  Q+  ++ ++A    + T ++ K++
Sbjct: 89  ETVAAFCLLSVFAGVAKMAGP---MYKEWAETQIQKQKDILNGARA----NHT-NAVKQR 140

Query: 72  ISGEKKISGSHDRDVALAEVEKEKRESFIKAWEESEKTKAENKAQKKLSAVAAWENSKK 130
           I   K++SG  D   AL EV KE      +A+E  ++T    +A+K L +   +E   K
Sbjct: 141 IENVKQLSGVVDITKALFEVSKETARLEAQAYELEQRTALAAEAKKVLDSWVQYEGQVK 199


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.299    0.116    0.304 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,777,177
Number of Sequences: 539616
Number of extensions: 2125793
Number of successful extensions: 20744
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 326
Number of HSP's successfully gapped in prelim test: 957
Number of HSP's that attempted gapping in prelim test: 17191
Number of HSP's gapped (non-prelim): 3612
length of query: 143
length of database: 191,569,459
effective HSP length: 106
effective length of query: 37
effective length of database: 134,370,163
effective search space: 4971696031
effective search space used: 4971696031
T: 11
A: 40
X1: 17 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.7 bits)
S2: 55 (25.8 bits)