BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032324
(143 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LT67|BH113_ARATH Transcription factor bHLH113 OS=Arabidopsis thaliana GN=BHLH113
PE=2 SV=1
Length = 270
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/139 (51%), Positives = 87/139 (62%), Gaps = 11/139 (7%)
Query: 12 DQGSLPTLTSKRHKADLSIS-AKERKEKLGERIIALQQLVSPYGKTDTASVLWEAMEYIQ 70
DQ P KR++ S+ AK RKE+LGERI ALQQLVSPYGKTD ASVL EAM YI+
Sbjct: 132 DQNRKPGKKGKRNQEKSSVGIAKVRKERLGERIAALQQLVSPYGKTDAASVLHEAMGYIK 191
Query: 71 FLHEQVKVLSAPYL--QSMPAAKVQ-----ELEQYSLRNRGLCLVPISCTAGVARSNGAD 123
FL +Q++VL +PYL S+ V ++ LR+RGLCLVP+S T V SNGAD
Sbjct: 192 FLQDQIQVLCSPYLINHSLDGGVVTGDVMAAMKAKDLRSRGLCLVPVSSTVHVENSNGAD 251
Query: 124 IWAPI---KTTSPKFEKAI 139
W+P TTSP +
Sbjct: 252 FWSPATMGHTTSPSLPQGF 270
>sp|Q94JL3|BH112_ARATH Transcription factor bHLH112 OS=Arabidopsis thaliana GN=BHLH112
PE=2 SV=1
Length = 393
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/106 (53%), Positives = 68/106 (64%), Gaps = 11/106 (10%)
Query: 33 KERKEKLGERIIALQQLVSPYGKTDTASVLWEAMEYIQFLHEQVKVLSAPYLQ------- 85
K RKE L ++I +LQQLVSP+GKTDTASVL EA+EYI+FLH+QV VLS PY++
Sbjct: 280 KVRKENLRDQITSLQQLVSPFGKTDTASVLQEAIEYIKFLHDQVTVLSTPYMKQGASNQQ 339
Query: 86 ----SMPAAKVQELEQYSLRNRGLCLVPISCTAGVARSNGADIWAP 127
S + E E + LR GLCLVPIS T VA AD W P
Sbjct: 340 QQQISGKSKSQDENENHELRGHGLCLVPISSTFPVANETTADFWTP 385
>sp|Q8GXT3|BH123_ARATH Transcription factor bHLH123 OS=Arabidopsis thaliana GN=BHLH123
PE=2 SV=1
Length = 454
Score = 107 bits (266), Expect = 3e-23, Method: Composition-based stats.
Identities = 58/120 (48%), Positives = 75/120 (62%), Gaps = 9/120 (7%)
Query: 17 PTLTSKRHKADLSISAKERKEKLGERIIALQQLVSPYGKTDTASVLWEAMEYIQFLHEQV 76
P + +A A +RKEK+G+RI ALQQLVSP+GKTD ASVL EA+EYI+FLH+QV
Sbjct: 328 PAAKRAKSEAASPSPAFKRKEKMGDRIAALQQLVSPFGKTDAASVLSEAIEYIKFLHQQV 387
Query: 77 KVLSAPYLQSMPAAKVQE---------LEQYSLRNRGLCLVPISCTAGVARSNGADIWAP 127
LS PY++S + + Q+ E+ LR+RGLCLVP+S T V D W P
Sbjct: 388 SALSNPYMKSGASLQHQQSDHSTELEVSEEPDLRSRGLCLVPVSSTFPVTHDTTVDFWTP 447
>sp|Q7XHI5|BH133_ARATH Transcription factor bHLH133 OS=Arabidopsis thaliana GN=BHLH133
PE=2 SV=1
Length = 362
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 72/142 (50%), Gaps = 42/142 (29%)
Query: 33 KERKEKLGERIIALQQLVSPYGKTDTASVLWEAMEYIQFLHEQVKVLSAPYLQS------ 86
K RKEKLG RI +L QLVSP+GKTDTASVL EA+ YI+FLH Q++ LS PY +
Sbjct: 219 KVRKEKLGGRIASLHQLVSPFGKTDTASVLSEAIGYIRFLHSQIEALSLPYFGTPSRNNM 278
Query: 87 ------------MPAAKVQELEQY------------------------SLRNRGLCLVPI 110
P Q + +Y LR+RGLCLVPI
Sbjct: 279 MHQHAQRNMNGIFPEDPGQLVNEYCMKRGVSLSSTDNQKSNPNEEPMKDLRSRGLCLVPI 338
Query: 111 SCTAGVARSNGADIWAPIKTTS 132
SCT V NGAD WAP T+
Sbjct: 339 SCTLQVGSDNGADYWAPAFGTT 360
>sp|Q8S3D1|BH068_ARATH Transcription factor bHLH68 OS=Arabidopsis thaliana GN=BHLH68 PE=2
SV=2
Length = 407
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 69/137 (50%), Gaps = 42/137 (30%)
Query: 33 KERKEKLGERIIALQQLVSPYGKTDTASVLWEAMEYIQFLHEQVKVLSAPYLQSMPAAKV 92
K RKEKLG RI AL QLVSP+GKTDTASVL EA+ YI+FL Q++ LS PY + + +
Sbjct: 263 KVRKEKLGGRIAALHQLVSPFGKTDTASVLSEAIGYIRFLQSQIEALSHPYFGTTASGNM 322
Query: 93 Q------------------------------------------ELEQYSLRNRGLCLVPI 110
+ E + LR+RGLCLVPI
Sbjct: 323 RHQQHLQGDRSCIFPEDPGQLVNDQCMKRRGASSSSTDNQNASEEPKKDLRSRGLCLVPI 382
Query: 111 SCTAGVARSNGADIWAP 127
SCT V NGAD WAP
Sbjct: 383 SCTLQVGSDNGADYWAP 399
>sp|Q9SFZ3|BH110_ARATH Transcription factor bHLH110 OS=Arabidopsis thaliana GN=BHLH110
PE=2 SV=2
Length = 453
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 63/92 (68%), Gaps = 12/92 (13%)
Query: 33 KERKEKLGERIIALQQLVSPYGKTDTASVLWEAMEYIQFLHEQVKVLSAPYL---QSMPA 89
K RKEKLG+RI ALQQLVSP+GKTDTASVL EA+ YI+FL Q++ LS PY+ ++ P
Sbjct: 332 KVRKEKLGDRIAALQQLVSPFGKTDTASVLMEAIGYIKFLQSQIETLSVPYMRASRNRPG 391
Query: 90 AKVQ---------ELEQYSLRNRGLCLVPISC 112
Q E E LR+RGLCLVP+SC
Sbjct: 392 KASQLVSQSQEGDEEETRDLRSRGLCLVPLSC 423
>sp|Q8VZ22|BH103_ARATH Transcription factor bHLH103 OS=Arabidopsis thaliana GN=BHLH103
PE=2 SV=1
Length = 301
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 68/99 (68%), Gaps = 16/99 (16%)
Query: 31 SAKERKEKLGERIIALQQLVSPYGKTDTASVLWEAMEYIQFLHEQV--KVLSAPYLQSMP 88
S K RKEKLG+RI ALQQLVSP+GKTDTASVL +A++YI+FL EQ+ KV ++P+L S+
Sbjct: 188 SFKVRKEKLGDRITALQQLVSPFGKTDTASVLHDAIDYIKFLQEQITEKVSTSPHLNSIG 247
Query: 89 AAKVQELEQYS--------------LRNRGLCLVPISCT 113
+ + ++ S LR+RGLCL+PIS T
Sbjct: 248 SGEQKQWSDKSSNNTHNQNCSPRQDLRSRGLCLMPISST 286
>sp|Q9FYJ6|BH111_ARATH Transcription factor bHLH111 OS=Arabidopsis thaliana GN=BHLH111
PE=2 SV=1
Length = 319
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 62/104 (59%), Gaps = 12/104 (11%)
Query: 36 KEKLGERIIALQQLVSPYGKTDTASVLWEAMEYIQFLHEQVKVLSAPYLQS--------- 86
K KL ++I LQQ+VSP+GKTDTASVL EA+ YI F EQVK+LS PY+++
Sbjct: 208 KAKLRDKITTLQQIVSPFGKTDTASVLQEAITYINFYQEQVKLLSTPYMKNSSMKDPWGG 267
Query: 87 --MPAAKVQELEQYSLRNRGLCLVPISCTAGVARSNGA-DIWAP 127
+ + LR+RGLCLVPIS T R N A D W P
Sbjct: 268 WDREDHNKRGPKHLDLRSRGLCLVPISYTPIAYRDNSATDYWNP 311
>sp|Q9M0X8|BH114_ARATH Transcription factor bHLH114 OS=Arabidopsis thaliana GN=BHLH114
PE=2 SV=2
Length = 298
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 64/100 (64%), Gaps = 20/100 (20%)
Query: 31 SAKERKEKLGERIIALQQLVSPYGKTDTASVLWEAMEYIQFLHEQVKVLSAPYLQSMPAA 90
S K RKEKLG+RI ALQQLVSP+GKTDTASVL EA+EYI+FL EQV VLS P ++ +
Sbjct: 171 SFKVRKEKLGDRITALQQLVSPFGKTDTASVLNEAVEYIKFLQEQVTVLSNPEQNTIGSV 230
Query: 91 KVQ------------ELEQ--------YSLRNRGLCLVPI 110
+ Q E+E+ L +RGLCL+PI
Sbjct: 231 QQQQCSNKKSINTQGEVEEDECSPRRYVDLSSRGLCLMPI 270
>sp|Q8S3D5|BH069_ARATH Transcription factor bHLH69 OS=Arabidopsis thaliana GN=BHLH69 PE=2
SV=2
Length = 310
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 57/117 (48%), Gaps = 35/117 (29%)
Query: 29 SISAKERKEKLGERIIALQQLVSPYGKTDTASVLWEAMEYIQFLHEQVKVLSAPYLQSMP 88
SI+ + R+E++ ER+ +LQ+LV KTD AS+L E ++Y++FL QVKVLS L
Sbjct: 142 SIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAA 201
Query: 89 AAKVQELE----------------------------------QYSLRNRGLCLVPIS 111
+A Q E QY L+ +GLCL+PIS
Sbjct: 202 SASSQISEDAGGSHENTSSSGEAKMTEHQVAKLMEEDMGSAMQY-LQGKGLCLMPIS 257
>sp|Q9ZUG9|BH066_ARATH Transcription factor bHLH66 OS=Arabidopsis thaliana GN=BHLH66 PE=2
SV=1
Length = 350
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 29 SISAKERKEKLGERIIALQQLVSPYGKTDTASVLWEAMEYIQFLHEQVKVLSAPYLQSMP 88
SI+ + R+E++ ER+ ALQ+LV KTD AS+L E ++Y++FL QVKVLS L
Sbjct: 150 SIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAA 209
Query: 89 AAKVQELE-QYSLRNRGLCLVPISCTAG 115
+ Q E S N +V S TAG
Sbjct: 210 SVSSQISEAGGSHGNASSAMVGGSQTAG 237
>sp|Q9LSQ3|BH082_ARATH Transcription factor bHLH82 OS=Arabidopsis thaliana GN=BHLH82 PE=2
SV=1
Length = 297
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 47/70 (67%), Gaps = 2/70 (2%)
Query: 17 PTLTSKRHKAD--LSISAKERKEKLGERIIALQQLVSPYGKTDTASVLWEAMEYIQFLHE 74
P + ++R +A SI+ + R+E++ ER+ +LQ+LV KTD AS+L E +EY++FL
Sbjct: 97 PRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQL 156
Query: 75 QVKVLSAPYL 84
QVKVLS L
Sbjct: 157 QVKVLSMSRL 166
>sp|Q9FJ00|BH086_ARATH Putative transcription factor bHLH086 OS=Arabidopsis thaliana
GN=BHLH86 PE=4 SV=2
Length = 307
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%)
Query: 6 RSPCAVDQGSLPTLTSKRHKADLSISAKERKEKLGERIIALQQLVSPYGKTDTASVLWEA 65
+ P + G + + K S++AK R+E++ ER+ LQ+LV K D ++L +A
Sbjct: 190 KKPSSGTNGKIKPKATTSPKDPQSLAAKNRRERISERLKVLQELVPNGTKVDLVTMLEKA 249
Query: 66 MEYIQFLHEQVKVLSAPYLQSMPAAKVQELEQ 97
+ Y++FL QVKVL+A K ++ Q
Sbjct: 250 IGYVKFLQVQVKVLAADEFWPAQGGKAPDISQ 281
>sp|Q8LEG1|BH054_ARATH Transcription factor bHLH54 OS=Arabidopsis thaliana GN=BHLH54 PE=2
SV=1
Length = 258
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 39/56 (69%)
Query: 29 SISAKERKEKLGERIIALQQLVSPYGKTDTASVLWEAMEYIQFLHEQVKVLSAPYL 84
S+ A++R+EK+ ER+ LQ LV K D +++L EA+ Y++FL Q+K+LS+ L
Sbjct: 179 SLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDL 234
>sp|Q8S3D2|BH087_ARATH Transcription factor bHLH87 OS=Arabidopsis thaliana GN=BHLH87 PE=2
SV=1
Length = 373
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 36/51 (70%)
Query: 29 SISAKERKEKLGERIIALQQLVSPYGKTDTASVLWEAMEYIQFLHEQVKVL 79
+++A++R+E++ E+I LQ LV K DTAS+L EA Y++FL QVK L
Sbjct: 281 TVAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKAL 331
>sp|Q7XHI9|BH084_ARATH Transcription factor bHLH84 OS=Arabidopsis thaliana GN=BHLH84 PE=2
SV=1
Length = 328
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 40/56 (71%)
Query: 29 SISAKERKEKLGERIIALQQLVSPYGKTDTASVLWEAMEYIQFLHEQVKVLSAPYL 84
S+ A++R+E++ ER+ LQ LV K D +++L EA++Y++FL Q+K+LS+ L
Sbjct: 249 SLYARKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDL 304
>sp|Q9C707|BH083_ARATH Transcription factor bHLH83 OS=Arabidopsis thaliana GN=BHLH83 PE=2
SV=1
Length = 298
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 41/69 (59%)
Query: 29 SISAKERKEKLGERIIALQQLVSPYGKTDTASVLWEAMEYIQFLHEQVKVLSAPYLQSMP 88
S++AK R+E++ ER+ LQ+LV K D ++L +A+ Y++FL QVKVL+
Sbjct: 207 SLAAKNRRERISERLKILQELVPNGTKVDLVTMLEKAISYVKFLQVQVKVLATDEFWPAQ 266
Query: 89 AAKVQELEQ 97
K ++ Q
Sbjct: 267 GGKAPDISQ 275
>sp|Q8GZM7|PIF1_ARATH Transcription factor PIF1 OS=Arabidopsis thaliana GN=PIF1 PE=1 SV=1
Length = 478
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 49/70 (70%), Gaps = 2/70 (2%)
Query: 13 QGSLPTLTSKRHKAD--LSISAKERKEKLGERIIALQQLVSPYGKTDTASVLWEAMEYIQ 70
Q + T ++KR +A ++S ++R++++ ER+ ALQ+L+ K+D AS+L EA+EY++
Sbjct: 272 QARVSTTSTKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMK 331
Query: 71 FLHEQVKVLS 80
L Q++++S
Sbjct: 332 SLQLQIQMMS 341
>sp|Q84WK0|BH085_ARATH Transcription factor bHLH85 OS=Arabidopsis thaliana GN=BHLH85 PE=2
SV=1
Length = 352
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 39/56 (69%)
Query: 29 SISAKERKEKLGERIIALQQLVSPYGKTDTASVLWEAMEYIQFLHEQVKVLSAPYL 84
S+ A++R+E++ ER+ LQ LV K D +++L EA+ Y++FL Q+K+LS+ L
Sbjct: 278 SLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDL 333
>sp|Q9FHA2|ALC_ARATH Transcription factor ALC OS=Arabidopsis thaliana GN=ALC PE=2 SV=1
Length = 210
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 38/52 (73%)
Query: 29 SISAKERKEKLGERIIALQQLVSPYGKTDTASVLWEAMEYIQFLHEQVKVLS 80
++S K+R+ K+ E++ ALQ+L+ KTD AS+L EA+EY++ L QV+ L+
Sbjct: 99 NLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTLA 150
>sp|O81313|IND_ARATH Transcription factor IND OS=Arabidopsis thaliana GN=IND PE=1 SV=3
Length = 198
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 11/79 (13%)
Query: 8 PCAVDQGSLPTLTSKRHKADLSIS-------AKERKEKLGERIIALQQLVSPYGKTDTAS 60
P +D ++P K ++ ++ IS A+ R+E++ E+I L+++V K DTAS
Sbjct: 100 PVDIDPATVP----KPNRRNVRISDDPQTVVARRRRERISEKIRILKRIVPGGAKMDTAS 155
Query: 61 VLWEAMEYIQFLHEQVKVL 79
+L EA+ Y +FL QV++L
Sbjct: 156 MLDEAIRYTKFLKRQVRIL 174
>sp|Q3E7L7|BH139_ARATH Transcription factor bHLH139 OS=Arabidopsis thaliana GN=BHLH139
PE=4 SV=1
Length = 223
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 39/56 (69%)
Query: 29 SISAKERKEKLGERIIALQQLVSPYGKTDTASVLWEAMEYIQFLHEQVKVLSAPYL 84
S+ A++R+E++ +R+ LQ LV K D +++L +A+ Y++FL Q+K+LS+ L
Sbjct: 144 SLYARKRRERINDRLKTLQSLVPNGTKVDISTMLEDAVHYVKFLQLQIKLLSSEDL 199
>sp|O80536|PIF3_ARATH Transcription factor PIF3 OS=Arabidopsis thaliana GN=PIF3 PE=1 SV=1
Length = 524
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Query: 19 LTSKRHKAD--LSISAKERKEKLGERIIALQQLVSPYGKTDTASVLWEAMEYIQFLHEQV 76
L SKR ++ ++S + R++++ E++ ALQ+L+ K D AS+L EA+EY++ L QV
Sbjct: 337 LGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQV 396
Query: 77 KVLS 80
+++S
Sbjct: 397 QIMS 400
>sp|Q9FUA4|SPT_ARATH Transcription factor SPATULA OS=Arabidopsis thaliana GN=SPT PE=1
SV=1
Length = 373
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 37/52 (71%)
Query: 29 SISAKERKEKLGERIIALQQLVSPYGKTDTASVLWEAMEYIQFLHEQVKVLS 80
++S K R+ ++ E++ ALQ L+ KTD AS+L EA+EY++ L QV++L+
Sbjct: 203 NLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLT 254
>sp|Q8GZ38|UNE10_ARATH Transcription factor UNE10 OS=Arabidopsis thaliana GN=UNE10 PE=2
SV=1
Length = 399
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 14 GSLPTLTSKRHKADL--SISAKERKEKLGERIIALQQLVSPYGKTDTASVLWEAMEYIQF 71
G ++++KR +A + S ++R++K+ +R+ LQ+LV KTD AS+L E +EY++
Sbjct: 202 GGKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQ 261
Query: 72 LHEQVKVLS 80
L QV ++S
Sbjct: 262 LQAQVSMMS 270
>sp|Q9LNJ5|BH013_ARATH Transcription factor bHLH13 OS=Arabidopsis thaliana GN=BHLH13 PE=2
SV=1
Length = 590
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 33/49 (67%)
Query: 33 KERKEKLGERIIALQQLVSPYGKTDTASVLWEAMEYIQFLHEQVKVLSA 81
++R+EKL +R AL+ +V K D AS+L +A+ YI LH ++KV+ A
Sbjct: 439 RQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEA 487
>sp|Q8S3F1|BH020_ARATH Transcription factor NAI1 OS=Arabidopsis thaliana GN=NAI1 PE=2 SV=1
Length = 320
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 5 KRSPCAVDQGSLPTLTSKRHKADLSISAKERKEKLGERIIALQQLVSPYGKTDTASVLWE 64
KR C + G K H ++ ++R++KL ER+IAL L+ KTD A+VL +
Sbjct: 114 KRKDCVNNGGRREPHLLKEH----VLAERKRRQKLNERLIALSALLPGLKKTDKATVLED 169
Query: 65 AMEYIQFLHEQVKVL 79
A+++++ L E+VK L
Sbjct: 170 AIKHLKQLQERVKKL 184
>sp|Q9T072|BH025_ARATH Transcription factor bHLH25 OS=Arabidopsis thaliana GN=BHLH25 PE=2
SV=2
Length = 328
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 35/50 (70%)
Query: 27 DLSISAKERKEKLGERIIALQQLVSPYGKTDTASVLWEAMEYIQFLHEQV 76
D I+ ++R+EKL +R +AL LV K D ASVL +A+++I++L E+V
Sbjct: 152 DHIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERV 201
>sp|Q7XAQ6|LAX_ORYSJ Transcription factor LAX PANICLE OS=Oryza sativa subsp. japonica
GN=LAX PE=1 SV=1
Length = 215
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 36/57 (63%)
Query: 29 SISAKERKEKLGERIIALQQLVSPYGKTDTASVLWEAMEYIQFLHEQVKVLSAPYLQ 85
S++A+ER+ ++ +R L+ LV K DT S+L +A+ Y++FL QV + A +Q
Sbjct: 46 SVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVTLHQAALVQ 102
>sp|Q9SVU6|BH023_ARATH Transcription factor bHLH23 OS=Arabidopsis thaliana GN=BHLH23 PE=2
SV=1
Length = 413
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 58/112 (51%), Gaps = 8/112 (7%)
Query: 18 TLTSKRHKADL--SISAKERKEKLGERIIALQQLVSPYGKTDTASVLWEAMEYIQFLHEQ 75
+ +SKR +A + +S + R++K+ E + ALQ+L+ KTD +S+L + +EY++ L Q
Sbjct: 270 STSSKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTKTDRSSMLDDVIEYVKSLQSQ 329
Query: 76 VKVLSAPYLQSMPAAKVQELEQYSL------RNRGLCLVPISCTAGVARSNG 121
+++ S ++ P ++Q + NR +P A +A G
Sbjct: 330 IQMFSMGHVMIPPMMYAGNIQQQYMPHMAMGMNRPPAFIPFPRQAHMAEGVG 381
>sp|Q9ZPY8|AIB_ARATH Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis
thaliana GN=AIB PE=2 SV=2
Length = 566
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 33/47 (70%)
Query: 33 KERKEKLGERIIALQQLVSPYGKTDTASVLWEAMEYIQFLHEQVKVL 79
++R+EKL +R AL+ +V K D AS+L +A+ YI+ L E+VK++
Sbjct: 401 RQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIM 447
>sp|Q1PF17|BH018_ARATH Transcription factor bHLH18 OS=Arabidopsis thaliana GN=BHLH18 PE=2
SV=1
Length = 305
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 37/56 (66%)
Query: 21 SKRHKADLSISAKERKEKLGERIIALQQLVSPYGKTDTASVLWEAMEYIQFLHEQV 76
S+ + D ++ ++R+EKL +R +AL L+ K D ASVL +A+++I++L E V
Sbjct: 120 SQSNAQDHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESV 175
>sp|Q9M041|BH140_ARATH Transcription factor bHLH140 OS=Arabidopsis thaliana GN=BHLH140
PE=4 SV=1
Length = 912
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 32/48 (66%)
Query: 29 SISAKERKEKLGERIIALQQLVSPYGKTDTASVLWEAMEYIQFLHEQV 76
S++A++R+ ++ +R LQ +V K DT S+L EA+ Y++FL Q+
Sbjct: 49 SVAARDRRHRISDRFKILQSMVPGGAKMDTVSMLDEAISYVKFLKAQI 96
>sp|Q700E3|BH027_ARATH Transcription factor bHLH27 OS=Arabidopsis thaliana GN=BHLH27 PE=2
SV=1
Length = 263
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 35/52 (67%)
Query: 30 ISAKERKEKLGERIIALQQLVSPYGKTDTASVLWEAMEYIQFLHEQVKVLSA 81
+S + R++KL +R+ AL+ +V K D ASV+ ++++Y+Q L +Q K L A
Sbjct: 57 VSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEA 108
>sp|Q9CAD0|EGL1_ARATH Transcription factor EGL1 OS=Arabidopsis thaliana GN=BHLH2 PE=1
SV=1
Length = 596
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 35/53 (66%)
Query: 29 SISAKERKEKLGERIIALQQLVSPYGKTDTASVLWEAMEYIQFLHEQVKVLSA 81
++S K+R+EKL ER + L+ ++ K D S+L + +EY+Q L ++V+ L +
Sbjct: 407 ALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELES 459
>sp|Q84LH8|PIF5_ARATH Transcription factor PIF5 OS=Arabidopsis thaliana GN=PIF5 PE=1 SV=1
Length = 444
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 51/98 (52%), Gaps = 23/98 (23%)
Query: 29 SISAKERKEKLGERIIALQQLVSPYGKTDTASVLWEAMEYIQFLHEQVKVL--------- 79
++S + R++++ ER+ ALQ+L+ +TD AS+L EA++Y++ L Q++V+
Sbjct: 262 NLSERRRRDRINERMKALQELIPHCSRTDKASILDEAIDYLKSLQMQLQVMWMGSGMAAA 321
Query: 80 --------------SAPYLQSMPAAKVQELEQYSLRNR 103
S+PY+ M +L Q+ + NR
Sbjct: 322 AAAAASPMMFPGVQSSPYINQMAMQSQMQLSQFPVMNR 359
>sp|Q9CAA4|BIM2_ARATH Transcription factor BIM2 OS=Arabidopsis thaliana GN=BIM2 PE=1 SV=1
Length = 311
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 29 SISAKERKEKLGERIIALQQLV-SPYGKTDTASVLWEAMEYIQFLHEQVKVLSAPY 83
S++ + R+ K+ ER L++L+ + K DTAS L E ++Y+Q+L E+V+ Y
Sbjct: 51 SVTEQRRRSKINERFQILRELIPNSEQKRDTASFLLEVIDYVQYLQEKVQKYEGSY 106
>sp|Q93Y00|BH007_ARATH Transcription factor bHLH7 OS=Arabidopsis thaliana GN=BHLH7 PE=2
SV=1
Length = 302
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 50/117 (42%), Gaps = 38/117 (32%)
Query: 45 ALQQLVSPYGKTDTASVLWEAMEYIQFLHEQVKVLS----------APYLQSMPAAKVQE 94
+LQ+LV KTD A+++ E ++Y++FL QVKVLS AP + MP + E
Sbjct: 172 SLQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTEMPLSSSVE 231
Query: 95 LEQYS----------------------------LRNRGLCLVPISCTAGVARSNGAD 123
E + L+++ LC++PIS + S D
Sbjct: 232 DETQAVWEKWSNDGTERQVAKLMEENVGAAMQLLQSKALCIMPISLAMAIYHSQPPD 288
>sp|Q2HIV9|BH035_ARATH Transcription factor bHLH35 OS=Arabidopsis thaliana GN=BHLH35 PE=2
SV=1
Length = 248
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Query: 30 ISAKERKEKLGERIIALQQLVSPYGKTDTASVLWEAMEYIQFLHEQVKVLSAPY--LQSM 87
+S + R++KL +R+ AL+ +V K D AS++ +A+ YI+ L + K L A L+S
Sbjct: 58 VSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRELEST 117
Query: 88 PAAKVQELEQYSLRNRGLCLVPIS 111
P + + + + +R L LVP++
Sbjct: 118 PKSSLSFSKDF---DRDL-LVPVT 137
>sp|Q9SVU7|BH056_ARATH Putative transcription factor bHLH056 OS=Arabidopsis thaliana
GN=BHLH56 PE=4 SV=2
Length = 445
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 29 SISAKERKEKLGERIIALQQLVSPYGKTDTASVLWEAMEYIQFLHEQVKVLSAPYLQSMP 88
+++ + R+EK+ E++ LQQL+ K+ S L +A+EY++ L Q++ + +P +
Sbjct: 261 NLAERRRREKINEKMKTLQQLIPRCNKSTKVSTLDDAIEYVKSLQSQIQGMMSPMMN--- 317
Query: 89 AAKVQELEQYSL--RNRGLCLVPISCTA 114
A Q+ + NR +P T+
Sbjct: 318 AGNTQQFMPHMAMDMNRPPPFIPFPGTS 345
>sp|Q9M0R0|BH081_ARATH Transcription factor bHLH81 OS=Arabidopsis thaliana GN=BHLH81 PE=2
SV=1
Length = 262
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 29 SISAKERKEKLGERIIALQQLVSPYGK-TDTASVLWEAMEYIQFLHEQVKVLS 80
SI+ + R+ ++ +RI LQ+LV K T+TA +L EA+EY++ L Q++ L+
Sbjct: 196 SIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQIQELT 248
>sp|Q9FN69|GL3_ARATH Transcription factor GLABRA 3 OS=Arabidopsis thaliana GN=GL3 PE=1
SV=1
Length = 637
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 33 KERKEKLGERIIALQQLVSPYGKTDTASVLWEAMEYIQFLHEQVKVLSA 81
K+R+EKL ER + L++++ K D S+L + +EY+Q L +V+ L +
Sbjct: 447 KKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQELES 495
>sp|Q9C8P8|BH080_ARATH Transcription factor bHLH80 OS=Arabidopsis thaliana GN=BHLH80 PE=1
SV=1
Length = 259
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 29 SISAKERKEKLGERIIALQQLVSPYGK-TDTASVLWEAMEYIQFLHEQVKVLS 80
SI+ + R+ ++ +RI LQ+LV K T+TA +L EA+EY++ L Q++ L+
Sbjct: 193 SIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQIQELT 245
>sp|Q9C690|BH122_ARATH Transcription factor bHLH122 OS=Arabidopsis thaliana GN=BHLH122
PE=1 SV=1
Length = 379
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 29 SISAKERKEKLGERIIALQQLVSPYG-KTDTASVLWEAMEYIQFLHEQVKVL 79
SI+ + R+ K+ ER+ LQ LV +T+TA +L A++YI+ L EQVK L
Sbjct: 316 SIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQVKAL 367
>sp|Q8W2F3|PIF4_ARATH Transcription factor PIF4 OS=Arabidopsis thaliana GN=PIF4 PE=1 SV=1
Length = 430
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 38/51 (74%)
Query: 29 SISAKERKEKLGERIIALQQLVSPYGKTDTASVLWEAMEYIQFLHEQVKVL 79
++S + R++++ ER+ ALQ+L+ KTD AS+L EA++Y++ L Q++V+
Sbjct: 263 NLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQVM 313
>sp|O22768|UNE12_ARATH Transcription factor UNE12 OS=Arabidopsis thaliana GN=UNE12 PE=2
SV=2
Length = 310
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 10/61 (16%)
Query: 46 LQQLVSPYGKTDTASVLWEAMEYIQFLHEQVKVLS----------APYLQSMPAAKVQEL 95
LQ+LV KTD A+++ E ++Y++FL QVKVLS AP + MP + E
Sbjct: 175 LQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDMPLSSSVED 234
Query: 96 E 96
E
Sbjct: 235 E 235
>sp|Q1PF16|BH019_ARATH Transcription factor bHLH19 OS=Arabidopsis thaliana GN=BHLH19 PE=2
SV=1
Length = 295
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 5 KRSPCAVDQGSLPTLTSKRHKADLSISAKERKEKLGERIIALQQLVSPYGKTDTASVLWE 64
KR C+ G+ + +K H ++ ++R+EKL E+ IAL L+ K D ++L +
Sbjct: 103 KRKTCS--HGTRSPVLAKEH----VLAERKRREKLSEKFIALSALLPGLKKADKVTILDD 156
Query: 65 AMEYIQFLHEQVKVL 79
A+ ++ L EQ++ L
Sbjct: 157 AISRMKQLQEQLRTL 171
>sp|Q9FJL4|BH078_ARATH Transcription factor bHLH78 OS=Arabidopsis thaliana GN=BHLH78 PE=2
SV=1
Length = 498
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 29 SISAKERKEKLGERIIALQQLVSPYGK-TDTASVLWEAMEYIQFLHEQVKVLS 80
S++ + R+EK+GER+ LQ LV K T A +L E + Y+Q L QV+ LS
Sbjct: 313 SLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLS 365
>sp|Q9ZVX2|AMS_ARATH Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana
GN=AMS PE=1 SV=2
Length = 571
Score = 38.5 bits (88), Expect = 0.013, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 32/50 (64%)
Query: 30 ISAKERKEKLGERIIALQQLVSPYGKTDTASVLWEAMEYIQFLHEQVKVL 79
++ + R++KL +R+ AL+ LV K D AS+L +A+ Y++ L + K L
Sbjct: 317 MAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKEL 366
>sp|Q9LEZ3|BIM1_ARATH Transcription factor BIM1 OS=Arabidopsis thaliana GN=BIM1 PE=1 SV=2
Length = 529
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 29 SISAKERKEKLGERIIALQQLV-SPYGKTDTASVLWEAMEYIQFLHEQ 75
S + + R+ K+ +R L+QL+ + K D AS L E +EYIQFL E+
Sbjct: 282 SATEQRRRSKINDRFQMLRQLIPNSDQKRDKASFLLEVIEYIQFLQEK 329
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.128 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,883,161
Number of Sequences: 539616
Number of extensions: 1651952
Number of successful extensions: 4464
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 4372
Number of HSP's gapped (non-prelim): 107
length of query: 143
length of database: 191,569,459
effective HSP length: 106
effective length of query: 37
effective length of database: 134,370,163
effective search space: 4971696031
effective search space used: 4971696031
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)