BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032327
(143 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9MAS5|VA726_ARATH Putative vesicle-associated membrane protein 726 OS=Arabidopsis
thaliana GN=VAMP726 PE=3 SV=2
Length = 220
Score = 225 bits (573), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 115/141 (81%), Positives = 128/141 (90%)
Query: 1 MAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQV 60
MAFLERVK++F +YGGGKA+TA AN LNKEFG KLKE MQYC DHPEEISKL+KVKAQV
Sbjct: 79 MAFLERVKEDFNKRYGGGKASTAKANSLNKEFGSKLKEHMQYCADHPEEISKLSKVKAQV 138
Query: 61 SEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNMKIKLIV 120
+EVKGVMMENIEKVLDRGEKIELLVDKTENL QAQDFR+ GTKM+RK+W +NMKIKLIV
Sbjct: 139 TEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTKMKRKLWFENMKIKLIV 198
Query: 121 LGILIALILIIVLSVCHGFNC 141
GI++ALILII+LSVCHGF C
Sbjct: 199 FGIIVALILIIILSVCHGFKC 219
>sp|Q9ZTW3|VA721_ARATH Vesicle-associated membrane protein 721 OS=Arabidopsis thaliana
GN=VAMP721 PE=1 SV=1
Length = 219
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 122/141 (86%), Positives = 131/141 (92%)
Query: 1 MAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQV 60
M+FLERVK++F +YGGGKAATA AN LNKEFG KLKE MQYC+DHP+EISKLAKVKAQV
Sbjct: 79 MSFLERVKEDFNKRYGGGKAATAQANSLNKEFGSKLKEHMQYCMDHPDEISKLAKVKAQV 138
Query: 61 SEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNMKIKLIV 120
SEVKGVMMENIEKVLDRGEKIELLVDKTENL QAQDFR+TGT+MRRKMWLQNMKIKLIV
Sbjct: 139 SEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTTGTQMRRKMWLQNMKIKLIV 198
Query: 121 LGILIALILIIVLSVCHGFNC 141
L I+IALILIIVLSVCHGF C
Sbjct: 199 LAIIIALILIIVLSVCHGFKC 219
>sp|P47192|VA722_ARATH Vesicle-associated membrane protein 722 OS=Arabidopsis thaliana
GN=VAMP722 PE=2 SV=2
Length = 221
Score = 219 bits (557), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 121/143 (84%), Positives = 131/143 (91%)
Query: 1 MAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQV 60
MAFLERVK++F +YGGGKAATA AN LNKEFG KLKE MQYC+DHP+EISKLAKVKAQV
Sbjct: 79 MAFLERVKEDFNKRYGGGKAATAQANSLNKEFGSKLKEHMQYCMDHPDEISKLAKVKAQV 138
Query: 61 SEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNMKIKLIV 120
SEVKGVMMENIEKVLDRGEKIELLVDKTENL QAQDFR+ GT+MRRKMW QNMKIKLIV
Sbjct: 139 SEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTQMRRKMWFQNMKIKLIV 198
Query: 121 LGILIALILIIVLSVCHGFNCGK 143
L I+IALILII+LS+C GFNCGK
Sbjct: 199 LAIIIALILIIILSICGGFNCGK 221
>sp|O48850|VA725_ARATH Vesicle-associated membrane protein 725 OS=Arabidopsis thaliana
GN=VAMP725 PE=2 SV=2
Length = 285
Score = 212 bits (539), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 116/141 (82%), Positives = 127/141 (90%)
Query: 1 MAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQV 60
MAFLERVK++F +YGGGKA TA AN LN+EFG KLKE MQYCVDHP+EISKLAKVKAQV
Sbjct: 144 MAFLERVKEDFNKRYGGGKATTAQANSLNREFGSKLKEHMQYCVDHPDEISKLAKVKAQV 203
Query: 61 SEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNMKIKLIV 120
+EVKGVMMENIEKVLDRGEKIELLVDKTENL QAQDFR+ GTK+RRKMW +NMKIKLIV
Sbjct: 204 TEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTKIRRKMWFENMKIKLIV 263
Query: 121 LGILIALILIIVLSVCHGFNC 141
LGI+I LILII+LSVC GF C
Sbjct: 264 LGIIITLILIIILSVCGGFKC 284
>sp|O23429|VA724_ARATH Vesicle-associated membrane protein 724 OS=Arabidopsis thaliana
GN=VAMP724 PE=2 SV=2
Length = 222
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 95/141 (67%), Positives = 116/141 (82%)
Query: 1 MAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQV 60
+AFLERVK +F +YGGGKA+TA A LNKEFGP +KE M Y VDH EEI KL KVKAQV
Sbjct: 80 IAFLERVKADFKKRYGGGKASTAIAKSLNKEFGPVMKEHMNYIVDHAEEIEKLIKVKAQV 139
Query: 61 SEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNMKIKLIV 120
SEVK +M+ENI+K +DRGE + +L DKTENL QAQ+++ GT++RRK+W QNMKIKL+V
Sbjct: 140 SEVKSIMLENIDKAIDRGENLTVLTDKTENLRSQAQEYKKQGTQVRRKLWYQNMKIKLVV 199
Query: 121 LGILIALILIIVLSVCHGFNC 141
LGIL+ L+LII +SVCHGFNC
Sbjct: 200 LGILLLLVLIIWISVCHGFNC 220
>sp|Q9M376|VA727_ARATH Vesicle-associated membrane protein 727 OS=Arabidopsis thaliana
GN=VAMP727 PE=2 SV=1
Length = 240
Score = 165 bits (417), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 82/161 (50%), Positives = 108/161 (67%), Gaps = 19/161 (11%)
Query: 1 MAFLERVKDEFVSKYGGG-------------------KAATAPANGLNKEFGPKLKELMQ 41
FLERVK++F +Y + A L++EFGP LKE MQ
Sbjct: 79 FVFLERVKEDFKKRYEASIKNDERHPLADEDEDDDLFGDRFSVAYNLDREFGPILKEHMQ 138
Query: 42 YCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRST 101
YC+ HPEE+SKL+K+KAQ++EVKG+MM+NIEKVLDRGEKIELLVDKTENL QA F+
Sbjct: 139 YCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGEKIELLVDKTENLQFQADSFQRQ 198
Query: 102 GTKMRRKMWLQNMKIKLIVLGILIALILIIVLSVCHGFNCG 142
G ++RRKMWLQ++++KL+V G + + ILI+ + C GF C
Sbjct: 199 GRQLRRKMWLQSLQMKLMVAGAVFSFILIVWVVACGGFKCS 239
>sp|Q8VY69|VA723_ARATH Vesicle-associated membrane protein 723 OS=Arabidopsis thaliana
GN=VAMP723 PE=2 SV=1
Length = 217
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 97/143 (67%), Positives = 108/143 (75%), Gaps = 4/143 (2%)
Query: 1 MAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQV 60
MAFLERVK++F +YGG KAAT AN LNKEFG LKE MQYC+DHP+EIS LAK KAQV
Sbjct: 79 MAFLERVKEDFYKRYGGEKAATDQANSLNKEFGSNLKEHMQYCMDHPDEISNLAKAKAQV 138
Query: 61 SEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNMKIKLIV 120
SEVK +MMENIEKVL RG E+L Q Q F T+M+RK W QNMKIKLIV
Sbjct: 139 SEVKSLMMENIEKVLARGVICEMLGSS----ESQPQAFYIKRTQMKRKKWFQNMKIKLIV 194
Query: 121 LGILIALILIIVLSVCHGFNCGK 143
L I+IALILII+LSVC GFNCGK
Sbjct: 195 LAIIIALILIIILSVCGGFNCGK 217
>sp|Q9FMR5|VA714_ARATH Vesicle-associated membrane protein 714 OS=Arabidopsis thaliana
GN=VAMP714 PE=2 SV=1
Length = 221
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 87/138 (63%), Gaps = 2/138 (1%)
Query: 1 MAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQV 60
++LE + F+ YG A APA +N EF L + M++ +P + L +V+ +V
Sbjct: 78 FSYLEEIHMRFMKNYGK-VAHNAPAYAMNDEFSRVLHQQMEFFSSNPS-VDTLNRVRGEV 135
Query: 61 SEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNMKIKLIV 120
SE++ VM+ENIEK+++RG++IELLVDKT + + FR ++RR +W++N K+ +++
Sbjct: 136 SEIRSVMVENIEKIMERGDRIELLVDKTATMQDSSFHFRKQSKRLRRALWMKNAKLLVLL 195
Query: 121 LGILIALILIIVLSVCHG 138
+++ L+ II+ S C G
Sbjct: 196 TCLIVFLLYIIIASFCGG 213
>sp|Q9LFP1|VA713_ARATH Vesicle-associated membrane protein 713 OS=Arabidopsis thaliana
GN=VAMP713 PE=2 SV=1
Length = 221
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 85/138 (61%), Gaps = 2/138 (1%)
Query: 1 MAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQV 60
AFL+ + FV YG +A A +N EF L + M++ + P +++++K ++
Sbjct: 78 FAFLDDIHQRFVKTYGRA-IHSAQAYSMNDEFSRVLSQQMEFYSNDPNA-DRMSRIKGEM 135
Query: 61 SEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNMKIKLIV 120
S+V+ VM+ENI+KVLDRGE++ELLVDKTEN+ FR + R MW +N+K+ + +
Sbjct: 136 SQVRNVMIENIDKVLDRGERLELLVDKTENMQGNTFRFRKQARRYRTIMWWRNVKLTIAL 195
Query: 121 LGILIALILIIVLSVCHG 138
+ +L ++ I + VCHG
Sbjct: 196 ILVLALVVYIAMAFVCHG 213
>sp|O49377|VA711_ARATH Vesicle-associated membrane protein 711 OS=Arabidopsis thaliana
GN=VAMP711 PE=2 SV=2
Length = 219
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 85/138 (61%), Gaps = 2/138 (1%)
Query: 1 MAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQV 60
AFLE + FV YG TA A +N+EF L + + Y + P ++ ++K ++
Sbjct: 77 FAFLEDIHQRFVRTYGRA-VHTALAYAMNEEFSRVLSQQIDYYSNDPNA-DRINRIKGEM 134
Query: 61 SEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNMKIKLIV 120
++V+GVM+ENI+KVLDRGE++ELLVDKT N+ FR + R +W +N K+ +++
Sbjct: 135 NQVRGVMIENIDKVLDRGERLELLVDKTANMQGNTFRFRKQARRFRSNVWWRNCKLTVLL 194
Query: 121 LGILIALILIIVLSVCHG 138
+ +L+ +I I V +CHG
Sbjct: 195 ILLLLVIIYIAVAFLCHG 212
>sp|Q86AQ7|VAM7B_DICDI Vesicle-associated membrane protein 7B OS=Dictyostelium discoideum
GN=vamp7B PE=3 SV=1
Length = 260
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 90/143 (62%), Gaps = 3/143 (2%)
Query: 1 MAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQV 60
FL+ VK+ F S YG K TA A G+N +F L+ LM + + + +++ A++
Sbjct: 76 FTFLDDVKNRFKSMYGD-KGKTAIAYGMNSDFSRTLENLMDH-YSNTTRVDTMSRTMAEI 133
Query: 61 SEVKGVMMENI-EKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNMKIKLI 119
EVK +++ +I ++L RGEKIE+LV++T+ L+QQ+ F+ +++ MW +N+K+ L+
Sbjct: 134 DEVKNILVSDIAPQLLKRGEKIEMLVERTDTLNQQSFKFKKQSKQLKCAMWWKNVKLMLV 193
Query: 120 VLGILIALILIIVLSVCHGFNCG 142
+ I++ +I IIV+S C GF G
Sbjct: 194 LGAIVLIIIFIIVMSYCDGFRSG 216
>sp|Q9SIQ9|VA712_ARATH Vesicle-associated membrane protein 712 OS=Arabidopsis thaliana
GN=VAMP712 PE=3 SV=1
Length = 219
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 81/138 (58%), Gaps = 2/138 (1%)
Query: 1 MAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQV 60
+FLE + FV YG +A A +N EF L + ++Y + P ++++K ++
Sbjct: 77 FSFLEDIHQRFVRTYGRA-IHSAQAYAMNDEFSRVLNQQIEYYSNDPNA-DTISRIKGEM 134
Query: 61 SEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNMKIKLIV 120
++V+ VM+ENI+ +LDRGE++ELLVDKT N+ FR + +W +N K+ L++
Sbjct: 135 NQVRDVMIENIDNILDRGERLELLVDKTANMQGNTFRFRKQTRRFNNTVWWRNCKLTLLL 194
Query: 121 LGILIALILIIVLSVCHG 138
+ +L+ +I I V CHG
Sbjct: 195 ILVLLVIIYIGVAFACHG 212
>sp|Q54NW7|VAM7A_DICDI Vesicle-associated membrane protein 7A OS=Dictyostelium discoideum
GN=vamp7A PE=1 SV=1
Length = 216
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 81/134 (60%), Gaps = 6/134 (4%)
Query: 3 FLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSE 62
FL ++ +F+ YG + +P + F L+E M+Y +P+ +K+ V QVSE
Sbjct: 80 FLSDIRQQFIRSYGQSFSQNSPTATYD-PFIRVLEERMKY-YSNPKS-NKMNLVMDQVSE 136
Query: 63 VKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNMKIKL---I 119
KG + + IEK + RGEKIE++VDKTE L ++ F+S ++RK+W QN K+ + +
Sbjct: 137 AKGALTDAIEKTIHRGEKIEIIVDKTERLQSESFVFKSNSVALKRKLWWQNKKLAIAIGL 196
Query: 120 VLGILIALILIIVL 133
V+ ILIA+I + +L
Sbjct: 197 VVCILIAVITLALL 210
>sp|Q5ZL74|VAMP7_CHICK Vesicle-associated membrane protein 7 OS=Gallus gallus GN=VAMP7
PE=2 SV=1
Length = 220
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 70/116 (60%), Gaps = 6/116 (5%)
Query: 3 FLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEE--ISKLAKVKAQV 60
FL +K F + YG +A TA +N EF L ++Y H E ++A+ +AQV
Sbjct: 78 FLNEIKKRFQTTYGS-RAQTALPYAMNSEFSSVLAAQLKY---HSESKGTDQVAETQAQV 133
Query: 61 SEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNMKI 116
E+KG+M+ NI+ V RGEK+ELL+DKTENL + F++T + R M ++N+K+
Sbjct: 134 DELKGIMVRNIDLVAQRGEKLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNLKL 189
>sp|P70280|VAMP7_MOUSE Vesicle-associated membrane protein 7 OS=Mus musculus GN=Vamp7 PE=1
SV=1
Length = 220
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 88/148 (59%), Gaps = 9/148 (6%)
Query: 1 MAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPE--EISKLAKVKA 58
+FL VK F + YG +A TA +N EF L +++ H E + K+ + +A
Sbjct: 76 FSFLNEVKKRFQTTYGS-RAQTALPYAMNSEFSSVLAAQLKH---HSENKSLDKVMETQA 131
Query: 59 QVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNMKIKL 118
QV E+KG+M+ NI+ V RGE++ELL+DKTENL + F++T + R M ++N+K+ +
Sbjct: 132 QVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNIKLTI 191
Query: 119 IVLGILIALILIIVLSVCHGF---NCGK 143
I++ + I I IIV +C GF NC K
Sbjct: 192 IIIIVSIVFIYIIVSLLCGGFTWPNCVK 219
>sp|Q17QI5|VAMP7_BOVIN Vesicle-associated membrane protein 7 OS=Bos taurus GN=VAMP7 PE=2
SV=1
Length = 220
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 87/146 (59%), Gaps = 9/146 (6%)
Query: 3 FLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEE--ISKLAKVKAQV 60
FL +K F + YG +A TA +N EF L +++ H E + K+ + +AQV
Sbjct: 78 FLNEIKKRFQTTYGS-RAQTALPYAMNSEFSSVLAAQLKH---HSENKGLDKVMETQAQV 133
Query: 61 SEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNMKIKLIV 120
E+KG+M+ NI+ V RGE++ELL+DKTENL + F++T + R M ++N+K+ +I+
Sbjct: 134 DELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNLKLTIII 193
Query: 121 LGILIALILIIVLSVCHGF---NCGK 143
+ I + I IIV +C GF NC K
Sbjct: 194 IIISVVFIYIIVSPLCGGFTWPNCVK 219
>sp|P51809|VAMP7_HUMAN Vesicle-associated membrane protein 7 OS=Homo sapiens GN=VAMP7 PE=1
SV=3
Length = 220
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 84/139 (60%), Gaps = 6/139 (4%)
Query: 3 FLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEE--ISKLAKVKAQV 60
FL +K F + YG +A TA +N EF L +++ H E + K+ + +AQV
Sbjct: 78 FLNEIKKRFQTTYGS-RAQTALPYAMNSEFSSVLAAQLKH---HSENKGLDKVMETQAQV 133
Query: 61 SEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNMKIKLIV 120
E+KG+M+ NI+ V RGE++ELL+DKTENL + F++T + R M ++N+K+ +I+
Sbjct: 134 DELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNLKLTIII 193
Query: 121 LGILIALILIIVLSVCHGF 139
+ + I I IIV +C GF
Sbjct: 194 IIVSIVFIYIIVSPLCGGF 212
>sp|Q9JHW5|VAMP7_RAT Vesicle-associated membrane protein 7 OS=Rattus norvegicus GN=Vamp7
PE=1 SV=1
Length = 220
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 84/139 (60%), Gaps = 2/139 (1%)
Query: 1 MAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQV 60
FL VK F + YG +A TA +N EF L +++ ++ + + ++ + +AQV
Sbjct: 76 FGFLNEVKKRFQTTYGS-RAQTALPYAMNSEFSSVLAAQLKHHSEN-QSLDRVTETQAQV 133
Query: 61 SEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNMKIKLIV 120
E+KG+M+ NI+ V RGE++ELL+DKTENL + F++T + R M ++N+K+ I+
Sbjct: 134 DELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCVKNVKLTAII 193
Query: 121 LGILIALILIIVLSVCHGF 139
+ + I I IIV +C GF
Sbjct: 194 VVVSIVFIYIIVSPLCGGF 212
>sp|Q5RF94|VAMP7_PONAB Vesicle-associated membrane protein 7 OS=Pongo abelii GN=VAMP7 PE=2
SV=3
Length = 220
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 84/139 (60%), Gaps = 6/139 (4%)
Query: 3 FLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEE--ISKLAKVKAQV 60
FL +K F + YG +A TA +N EF L +++ H E + K+ + +AQV
Sbjct: 78 FLNEIKKRFQTTYGS-RAQTALPYAMNSEFSSVLAAQLKH---HSENKGLDKVMETQAQV 133
Query: 61 SEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNMKIKLIV 120
E+KG+M+ NI+ V RGE++ELL+DKTENL + F++T + R M ++N+K+ +I+
Sbjct: 134 DELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNLKLTIII 193
Query: 121 LGILIALILIIVLSVCHGF 139
+ + I I IIV +C GF
Sbjct: 194 IIVSIVFIYIIVSPLCGGF 212
>sp|P18489|SYB_DROME Synaptobrevin OS=Drosophila melanogaster GN=Syb PE=2 SV=3
Length = 152
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 1/82 (1%)
Query: 52 KLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWL 111
KL + +A+V EV G+M N+EKVL+R +K+ L ++ + L Q A F K++RK W
Sbjct: 47 KLQQTQAKVDEVVGIMRVNVEKVLERDQKLSELGERADQLEQGASQFEQQAGKLKRKQWW 106
Query: 112 QNMKIKLIVLGILIALILIIVL 133
NMK+ +I+LG++ ++LIIVL
Sbjct: 107 ANMKM-MIILGVIAVVLLIIVL 127
>sp|Q92356|SYB1_SCHPO Synaptobrevin homolog 1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=syb1 PE=3 SV=1
Length = 121
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 46/66 (69%)
Query: 52 KLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWL 111
K A ++ Q+ + G+M ENI KV +RGE+++ L DKT+NL AQ FR ++R+KMW
Sbjct: 31 KTAAIQQQIDDTVGIMRENISKVSERGERLDSLQDKTDNLAVSAQGFRRGANRVRKKMWW 90
Query: 112 QNMKIK 117
++M+++
Sbjct: 91 KDMRMR 96
>sp|P35589|SYB_APLCA Synaptobrevin OS=Aplysia californica PE=2 SV=1
Length = 180
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 46/73 (63%)
Query: 48 EEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRR 107
E+ +L + +AQV EV +M N+EKVLDR +KI L D+ E L A F ++ K++R
Sbjct: 17 EQSKRLQQTQAQVDEVVDIMRVNVEKVLDRDQKISQLDDRAEALQAGASQFEASAGKLKR 76
Query: 108 KMWLQNMKIKLIV 120
K W +N K+ LI+
Sbjct: 77 KYWWKNCKMMLIL 89
>sp|Q32L97|VAMP4_BOVIN Vesicle-associated membrane protein 4 OS=Bos taurus GN=VAMP4 PE=2
SV=1
Length = 141
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 46/70 (65%)
Query: 51 SKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMW 110
K+ V+ QV EV VM ENI KV++RGE+++ L DK+E+L A F + ++RR+MW
Sbjct: 51 DKIKHVQNQVDEVIDVMQENITKVIERGERLDELQDKSESLSDNATAFSNRSKQLRRQMW 110
Query: 111 LQNMKIKLIV 120
+ KIK I+
Sbjct: 111 WRGCKIKAIM 120
>sp|O75379|VAMP4_HUMAN Vesicle-associated membrane protein 4 OS=Homo sapiens GN=VAMP4 PE=1
SV=2
Length = 141
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 46/70 (65%)
Query: 51 SKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMW 110
K+ V+ QV EV VM ENI KV++RGE+++ L DK+E+L A F + ++RR+MW
Sbjct: 51 DKIKHVQNQVDEVIDVMQENITKVIERGERLDELQDKSESLSDNATAFSNRSKQLRRQMW 110
Query: 111 LQNMKIKLIV 120
+ KIK I+
Sbjct: 111 WRGCKIKAIM 120
>sp|P31109|SNC1_YEAST Synaptobrevin homolog 1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SNC1 PE=1 SV=1
Length = 117
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 54/83 (65%), Gaps = 3/83 (3%)
Query: 39 LMQYCVDHPEEI---SKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQA 95
L ++ + P+ + S+ A+++A++ + G+M +NI KV +RGE++ + DK +NL A
Sbjct: 12 LSEHDEERPQNVQSKSRTAELQAEIDDTVGIMRDNINKVAERGERLTSIEDKADNLAVSA 71
Query: 96 QDFRSTGTKMRRKMWLQNMKIKL 118
Q F+ ++R+ MW +++K+K+
Sbjct: 72 QGFKRGANRVRKAMWYKDLKMKM 94
>sp|O70480|VAMP4_MOUSE Vesicle-associated membrane protein 4 OS=Mus musculus GN=Vamp4 PE=1
SV=1
Length = 141
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 44/67 (65%)
Query: 51 SKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMW 110
K+ V+ QV EV VM ENI KV++RGE+++ L DK+E+L A F + ++RR+MW
Sbjct: 51 DKIKHVQNQVDEVIDVMQENITKVIERGERLDELQDKSESLSDNATAFSNRSKQLRRQMW 110
Query: 111 LQNMKIK 117
+ KIK
Sbjct: 111 WRGCKIK 117
>sp|P33328|SNC2_YEAST Synaptobrevin homolog 2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SNC2 PE=1 SV=2
Length = 115
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 49/76 (64%)
Query: 46 HPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKM 105
+P +K A ++ ++ + G+M +NI KV +RGE++ + DK +NL AQ F+ ++
Sbjct: 21 NPNSQNKTAALRQEIDDTVGIMRDNINKVAERGERLTSIEDKADNLAISAQGFKRGANRV 80
Query: 106 RRKMWLQNMKIKLIVL 121
R++MW +++K+++ +
Sbjct: 81 RKQMWWKDLKMRMCLF 96
>sp|Q5REQ5|VAMP8_PONAB Vesicle-associated membrane protein 8 OS=Pongo abelii GN=VAMP8 PE=3
SV=1
Length = 100
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 49/70 (70%), Gaps = 2/70 (2%)
Query: 52 KLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWL 111
++ ++++V VK +M +N+E++L RGE +E L +KTE+L ++ F++T K+ RK W
Sbjct: 12 RVRNLQSEVEGVKNIMTQNVERILARGENLEHLRNKTEDLEATSEHFKTTSQKVARKFWW 71
Query: 112 QNMKIKLIVL 121
+N +K+IVL
Sbjct: 72 KN--VKMIVL 79
>sp|Q9BV40|VAMP8_HUMAN Vesicle-associated membrane protein 8 OS=Homo sapiens GN=VAMP8 PE=1
SV=1
Length = 100
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 49/70 (70%), Gaps = 2/70 (2%)
Query: 52 KLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWL 111
++ ++++V VK +M +N+E++L RGE +E L +KTE+L ++ F++T K+ RK W
Sbjct: 12 RVRNLQSEVEGVKNIMTQNVERILARGENLEHLRNKTEDLEATSEHFKTTSQKVARKFWW 71
Query: 112 QNMKIKLIVL 121
+N +K+IVL
Sbjct: 72 KN--VKMIVL 79
>sp|Q0V7N0|VAMP1_BOVIN Vesicle-associated membrane protein 1 OS=Bos taurus GN=VAMP1 PE=3
SV=2
Length = 118
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 52 KLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWL 111
+L + +AQV EV +M N++KVL+R +K+ L D+ + L A F S+ K++RK W
Sbjct: 33 RLQQTQAQVEEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFESSAAKLKRKYWW 92
Query: 112 QNMKIKLIVLGILIA 126
+N K+ +I+LG + A
Sbjct: 93 KNCKM-MIMLGAICA 106
>sp|Q62442|VAMP1_MOUSE Vesicle-associated membrane protein 1 OS=Mus musculus GN=Vamp1 PE=1
SV=1
Length = 118
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 52 KLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWL 111
+L + +AQV EV +M N++KVL+R +K+ L D+ + L A F S+ K++RK W
Sbjct: 33 RLQQTQAQVEEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFESSAAKLKRKYWW 92
Query: 112 QNMKIKLIVLGILIA 126
+N K+ +I+LG + A
Sbjct: 93 KNCKM-MIMLGAICA 106
>sp|P63026|VAMP2_BOVIN Vesicle-associated membrane protein 2 OS=Bos taurus GN=VAMP2 PE=1
SV=2
Length = 116
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 52 KLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWL 111
+L + +AQV EV +M N++KVL+R +K+ L D+ + L A F ++ K++RK W
Sbjct: 31 RLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWW 90
Query: 112 QNMKIKLIVLGI 123
+N+K+ +I+LG+
Sbjct: 91 KNLKM-MIILGV 101
>sp|P63045|VAMP2_RAT Vesicle-associated membrane protein 2 OS=Rattus norvegicus GN=Vamp2
PE=1 SV=2
Length = 116
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 52 KLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWL 111
+L + +AQV EV +M N++KVL+R +K+ L D+ + L A F ++ K++RK W
Sbjct: 31 RLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWW 90
Query: 112 QNMKIKLIVLGI 123
+N+K+ +I+LG+
Sbjct: 91 KNLKM-MIILGV 101
>sp|P63044|VAMP2_MOUSE Vesicle-associated membrane protein 2 OS=Mus musculus GN=Vamp2 PE=1
SV=2
Length = 116
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 52 KLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWL 111
+L + +AQV EV +M N++KVL+R +K+ L D+ + L A F ++ K++RK W
Sbjct: 31 RLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWW 90
Query: 112 QNMKIKLIVLGI 123
+N+K+ +I+LG+
Sbjct: 91 KNLKM-MIILGV 101
>sp|Q9N0Y0|VAMP2_MACMU Vesicle-associated membrane protein 2 OS=Macaca mulatta GN=VAMP2
PE=3 SV=3
Length = 116
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 52 KLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWL 111
+L + +AQV EV +M N++KVL+R +K+ L D+ + L A F ++ K++RK W
Sbjct: 31 RLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWW 90
Query: 112 QNMKIKLIVLGI 123
+N+K+ +I+LG+
Sbjct: 91 KNLKM-MIILGV 101
>sp|P63027|VAMP2_HUMAN Vesicle-associated membrane protein 2 OS=Homo sapiens GN=VAMP2 PE=1
SV=3
Length = 116
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 52 KLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWL 111
+L + +AQV EV +M N++KVL+R +K+ L D+ + L A F ++ K++RK W
Sbjct: 31 RLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWW 90
Query: 112 QNMKIKLIVLGI 123
+N+K+ +I+LG+
Sbjct: 91 KNLKM-MIILGV 101
>sp|P47193|VAMP2_XENLA Vesicle-associated membrane protein 2 OS=Xenopus laevis GN=vamp2
PE=3 SV=3
Length = 114
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 52 KLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWL 111
+L + +AQV EV +M N++KVL+R K+ L D+ + L A F ++ K++RK W
Sbjct: 29 RLQQTQAQVDEVVDIMRVNVDKVLERDTKLSELDDRADALQAGASQFETSAAKLKRKYWW 88
Query: 112 QNMKIKLIVLGI 123
+NMK+ +I++G+
Sbjct: 89 KNMKM-MIIMGV 99
>sp|O70404|VAMP8_MOUSE Vesicle-associated membrane protein 8 OS=Mus musculus GN=Vamp8 PE=1
SV=1
Length = 101
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 46/65 (70%)
Query: 52 KLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWL 111
++ ++++V VK +M +N+E++L RGE ++ L +KTE+L ++ F++T K+ RK W
Sbjct: 12 RVRNLQSEVEGVKNIMTQNVERILSRGENLDHLRNKTEDLEATSEHFKTTSQKVARKFWW 71
Query: 112 QNMKI 116
+N+K+
Sbjct: 72 KNVKM 76
>sp|Q54GB3|SYBB_DICDI Synaptobrevin-B OS=Dictyostelium discoideum GN=sybB PE=3 SV=1
Length = 101
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 54/89 (60%)
Query: 51 SKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMW 110
+K + +V +VK VM NI +L+ +K L DKT ++ A+ F+ +RR+MW
Sbjct: 12 NKTQSILQEVDKVKDVMHNNIGLMLNNHDKASNLQDKTASMSNNARLFKKQTVTIRRQMW 71
Query: 111 LQNMKIKLIVLGILIALILIIVLSVCHGF 139
+NMK++LI++ ++I ++ +I++ + F
Sbjct: 72 CRNMKLQLIIIAVVILVLAVILIPIIMKF 100
>sp|Q3T0Y8|VAMP8_BOVIN Vesicle-associated membrane protein 8 OS=Bos taurus GN=VAMP8 PE=2
SV=1
Length = 100
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 51 SKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMW 110
++ ++ +V VK +M +N+E++L RGE ++ L +KTE+L ++ F++T K+ RK W
Sbjct: 10 DRVRNLRDEVEGVKNIMTQNVERILARGENLDHLRNKTEDLEATSEHFKTTSQKVARKFW 69
Query: 111 LQNMKIKLIVL 121
+N +K+IVL
Sbjct: 70 WKN--VKMIVL 78
>sp|Q60WU2|SYB1_CAEBR Synaptobrevin-1 OS=Caenorhabditis briggsae GN=snb-1 PE=3 SV=1
Length = 108
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 45/69 (65%)
Query: 52 KLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWL 111
+L + +AQV EV G+M N+EKVL+R +K+ L D+ + L + A F + ++RK W
Sbjct: 22 RLQQTQAQVDEVVGIMKVNVEKVLERDQKLSQLDDRADALQEGASQFEKSAATLKRKYWW 81
Query: 112 QNMKIKLIV 120
+N+K+ +I+
Sbjct: 82 KNIKMMIIM 90
>sp|Q63666|VAMP1_RAT Vesicle-associated membrane protein 1 OS=Rattus norvegicus GN=Vamp1
PE=1 SV=2
Length = 118
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 52 KLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWL 111
+L + +AQV EV +M N++KVL+R +K+ L D+ + L A F S+ K++RK W
Sbjct: 33 RLQQTQAQVEEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASVFESSAAKLKRKYWW 92
Query: 112 QNMKIKLIVLGILIA 126
+N K+ +I+LG + A
Sbjct: 93 KNCKM-MIMLGAICA 106
>sp|O02495|SYB1_CAEEL Synaptobrevin-1 OS=Caenorhabditis elegans GN=snb-1 PE=1 SV=1
Length = 109
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 45/69 (65%)
Query: 52 KLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWL 111
+L + +AQV EV G+M N+EKVL+R +K+ L D+ + L + A F + ++RK W
Sbjct: 23 RLQQTQAQVDEVVGIMKVNVEKVLERDQKLSQLDDRADALQEGASQFEKSAATLKRKYWW 82
Query: 112 QNMKIKLIV 120
+N+K+ +I+
Sbjct: 83 KNIKMMIIM 91
>sp|P23763|VAMP1_HUMAN Vesicle-associated membrane protein 1 OS=Homo sapiens GN=VAMP1 PE=1
SV=1
Length = 118
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 52 KLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWL 111
+L + +AQV EV ++ N++KVL+R +K+ L D+ + L A F S+ K++RK W
Sbjct: 33 RLQQTQAQVEEVVDIIRVNVDKVLERDQKLSELDDRADALQAGASQFESSAAKLKRKYWW 92
Query: 112 QNMKIKLIVLGILIA 126
+N K+ +I+LG + A
Sbjct: 93 KNCKM-MIMLGAICA 106
>sp|Q9WUF4|VAMP8_RAT Vesicle-associated membrane protein 8 OS=Rattus norvegicus GN=Vamp8
PE=1 SV=1
Length = 100
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 46/65 (70%)
Query: 52 KLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWL 111
++ ++++V VK +M +N+E++L RGE ++ L +KTE+L ++ F++T K+ RK W
Sbjct: 11 RVRNLQSEVEGVKNIMTQNVERILARGENLDHLRNKTEDLEATSEHFKTTSQKVARKFWW 70
Query: 112 QNMKI 116
+N+K+
Sbjct: 71 KNVKM 75
>sp|P47194|SYB_DORPE Synaptobrevin OS=Doryteuthis pealeii PE=1 SV=1
Length = 125
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 52 KLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWL 111
+L + +AQV EV +M N++KVL+R KI L D+ + L A F ++ K++RK W
Sbjct: 40 RLQQTQAQVEEVVDIMRVNVDKVLERDSKISELDDRADALQAGASQFEASAGKLKRKFWW 99
Query: 112 QNMKIKLIVLG 122
+N K+ +I+LG
Sbjct: 100 KNCKM-MIILG 109
>sp|P13701|SYB_TORCA Synaptobrevin OS=Torpedo californica PE=2 SV=1
Length = 120
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 44/69 (63%)
Query: 52 KLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWL 111
+L + +AQV EV ++ N++KVL+R +K+ L D+ + L A F S+ K++RK W
Sbjct: 35 RLQQTQAQVEEVVDIIRVNVDKVLERDQKLSELDDRADALQAGASQFESSAAKLKRKYWW 94
Query: 112 QNMKIKLIV 120
+N K+ +++
Sbjct: 95 KNCKMMIML 103
>sp|Q12255|NYV1_YEAST Vacuolar v-SNARE NYV1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=NYV1 PE=1 SV=2
Length = 253
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 59 QVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNMKIKL 118
Q+ +V +M +NI+K L+R E++ LLVDKT L+ + FR ++ MW Q K+K
Sbjct: 174 QIKDVIQIMNDNIDKFLERQERVSLLVDKTSQLNSSSNKFRRKAVNIKEIMWWQ--KVKN 231
Query: 119 IVLGILIALILIIVLSVCHGF 139
I L L I+L V F
Sbjct: 232 ITL-----LTFTIILFVSAAF 247
>sp|Q4R8T0|VAMP3_MACFA Vesicle-associated membrane protein 3 OS=Macaca fascicularis
GN=VAMP3 PE=3 SV=1
Length = 100
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%)
Query: 47 PEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMR 106
P +L + + QV EV +M N++KVL+R +K+ L D+ + L A F ++ K++
Sbjct: 9 PGSNRRLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLK 68
Query: 107 RKMWLQNMKIKLI 119
RK W +N K+ I
Sbjct: 69 RKYWWKNCKMWAI 81
>sp|Q9CQW1|YKT6_MOUSE Synaptobrevin homolog YKT6 OS=Mus musculus GN=Ykt6 PE=2 SV=1
Length = 198
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 56/109 (51%), Gaps = 14/109 (12%)
Query: 1 MAFLERVKDEFVSK-----YGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAK 55
LE+V DEF + + G AT GL+ L +Y +P E ++K
Sbjct: 91 FTLLEKVLDEFSKQVDRIDWPVGSPATIQYTGLDDH-------LSKY--QNPREADPMSK 141
Query: 56 VKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTK 104
V+A++ E K ++ +E +L+RGEK++ LV K+E L Q++ F T K
Sbjct: 142 VQAELDETKIILHNTMESLLERGEKLDDLVSKSEVLGTQSKAFYKTARK 190
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,649,023
Number of Sequences: 539616
Number of extensions: 1835775
Number of successful extensions: 8761
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 107
Number of HSP's successfully gapped in prelim test: 78
Number of HSP's that attempted gapping in prelim test: 8596
Number of HSP's gapped (non-prelim): 224
length of query: 143
length of database: 191,569,459
effective HSP length: 106
effective length of query: 37
effective length of database: 134,370,163
effective search space: 4971696031
effective search space used: 4971696031
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)