BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032329
(143 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O74800|IMP1_SCHPO Mitochondrial inner membrane protease subunit 1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=imp1 PE=3 SV=1
Length = 157
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 6/99 (6%)
Query: 40 VWKYLFQGKLTYLYGNKGDQMAPVMGGLGGTLLVRKLPAADPKRVSVGDVVVMKDPEKSD 99
+ +YLFQ ++T G M P + G +L+ KL + SVGDVVV P S
Sbjct: 21 IHEYLFQVQMT-----SGPSMMPTLNSGGEFVLLDKLHGRFARSCSVGDVVVSAKPSDSK 75
Query: 100 NYIVRRLAAIEGYEM-VSTDEKDEPFVLDKDECWVLADN 137
++ +R+ + G + V ++ + W+ DN
Sbjct: 76 QHVCKRIIGMPGDTIYVDPTSSNKKITIPLGHVWLAGDN 114
>sp|O25300|LEP_HELPY Signal peptidase I OS=Helicobacter pylori (strain ATCC 700392 /
26695) GN=lepB PE=3 SV=1
Length = 290
Score = 32.7 bits (73), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 81 PKRVSVGDVVVMKDPEKSDNYIVRRLAAIEGYEMVSTDEKD--EPFVLDKDECWVLADNE 138
PKR G+VVV P + +Y V+R AI G E++ T+E PF D D+ ++
Sbjct: 86 PKR---GEVVVFIPPHEKKSYYVKRNFAIGGDEVLFTNEGFYLHPFESDTDKNYIAKHYP 142
Query: 139 NMKPK 143
N K
Sbjct: 143 NAMTK 147
>sp|A7NNA4|RPIA_ROSCS Ribose-5-phosphate isomerase A OS=Roseiflexus castenholzii (strain
DSM 13941 / HLO8) GN=rpiA PE=3 SV=1
Length = 234
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 42/95 (44%), Gaps = 19/95 (20%)
Query: 66 GLGGTLLVRKLPAADPKRVSVGDVV---VMKDPEKSD----------NYIVRRLAAIEGY 112
GLGG +L K+ AA R V V V + E+S +RRLAA+ G
Sbjct: 99 GLGGAMLREKIVAASAARFVVMASVSKRVERLGERSPLPVEVVTFGMPLCIRRLAALGGE 158
Query: 113 EMVSTDEKDEPFVLDKD----ECW--VLADNENMK 141
++ D PFV D+ +C V+AD E +
Sbjct: 159 PVLRCDHSGAPFVTDEGNLILDCHFGVIADPEALA 193
>sp|Q2NVN4|CYSJ_SODGM Sulfite reductase [NADPH] flavoprotein alpha-component OS=Sodalis
glossinidius (strain morsitans) GN=cysJ PE=3 SV=1
Length = 603
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 11/62 (17%)
Query: 7 WFRYIANKLEYSVSISWKSYTRGQINDIELRD-------SVWKYLFQGKLTYLYGNKGDQ 59
W RY+ +L +S++W +R Q I ++D VW+++ QG Y+ G+ ++
Sbjct: 506 WQRYVKERLLTKISLAW---SRDQAEKIYVQDRVREQGAEVWRWIQQGAHIYVCGD-ANR 561
Query: 60 MA 61
MA
Sbjct: 562 MA 563
>sp|Q87ZT0|CYSG_PSESM Siroheme synthase OS=Pseudomonas syringae pv. tomato (strain
DC3000) GN=cysG PE=3 SV=1
Length = 464
Score = 31.2 bits (69), Expect = 2.0, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 54/125 (43%), Gaps = 11/125 (8%)
Query: 4 LSTWFRYIANKLEYSVSISWKSYTRGQINDIELRDSVWKYLFQGKLTYLYGNKGDQMAPV 63
L TW +L ++ +++ +G + +++ R + W+ +FQG + D+
Sbjct: 143 LETWIPSSYGQLA-GLAARFRNQVKGLLPNVQQRRAFWEEVFQGAI-------ADRQLAG 194
Query: 64 MGGLGGTLLVRKLPAADPKRVSVGDV-VVMKDPEKSDNYIVRRLAAIEGYEMVSTDEKDE 122
G LL+ K+ P + G+V +V P D R L ++ ++V D
Sbjct: 195 QGAEAERLLIAKIAGEPPAQ--TGEVYLVGAGPGDPDLLTFRALRLMQQADVVLYDRLVA 252
Query: 123 PFVLD 127
P +LD
Sbjct: 253 PTILD 257
>sp|C3JY53|CYSG_PSEFS Siroheme synthase OS=Pseudomonas fluorescens (strain SBW25) GN=cysG
PE=3 SV=1
Length = 464
Score = 30.8 bits (68), Expect = 2.5, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 54/125 (43%), Gaps = 11/125 (8%)
Query: 4 LSTWFRYIANKLEYSVSISWKSYTRGQINDIELRDSVWKYLFQGKLTYLYGNKGDQMAPV 63
L TW +L ++ +++ +G D++ R + W+ +FQG + D+
Sbjct: 143 LETWIPSTYGQLA-GLAARFRAQVKGLYPDVQQRRAFWEEVFQGPI-------ADRQLAG 194
Query: 64 MGGLGGTLLVRKLPAADPKRVSVGDV-VVMKDPEKSDNYIVRRLAAIEGYEMVSTDEKDE 122
G LL+ K+ A P + G+V +V P D R L ++ ++V D
Sbjct: 195 QGDEAERLLIEKVNGAPP--YAPGEVYLVGAGPGDPDLLTFRALRLMQQADVVLYDRLVA 252
Query: 123 PFVLD 127
P +L+
Sbjct: 253 PAILE 257
>sp|Q8BPT6|IMP2L_MOUSE Mitochondrial inner membrane protease subunit 2 OS=Mus musculus
GN=Immp2l PE=2 SV=1
Length = 175
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 28/55 (50%)
Query: 84 VSVGDVVVMKDPEKSDNYIVRRLAAIEGYEMVSTDEKDEPFVLDKDECWVLADNE 138
V GD+V + P+ + I++R+ A+EG + + K+ + + WV D+
Sbjct: 71 VQRGDIVSLVSPKNPEQKIIKRVIALEGDIVRTIGHKNRLVKVPRGHMWVEGDHH 125
>sp|Q96T52|IMP2L_HUMAN Mitochondrial inner membrane protease subunit 2 OS=Homo sapiens
GN=IMMP2L PE=2 SV=1
Length = 175
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 28/55 (50%)
Query: 84 VSVGDVVVMKDPEKSDNYIVRRLAAIEGYEMVSTDEKDEPFVLDKDECWVLADNE 138
V GD+V + P+ + I++R+ A+EG + + K+ + + WV D+
Sbjct: 71 VHRGDIVSLVSPKNPEQKIIKRVIALEGDIVRTIGHKNRYVKVPRGHIWVEGDHH 125
>sp|Q5PQ63|IMP2L_XENLA Mitochondrial inner membrane protease subunit 2 OS=Xenopus laevis
GN=immp2l PE=2 SV=1
Length = 170
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 28/55 (50%)
Query: 84 VSVGDVVVMKDPEKSDNYIVRRLAAIEGYEMVSTDEKDEPFVLDKDECWVLADNE 138
V GD+V + P+ + I++R+ A+EG + + K+ + + WV D+
Sbjct: 68 VQRGDIVSLVSPKNPEQKIIKRVIALEGDIVKTLGHKNRYVKVPRGHVWVEGDHH 122
>sp|Q2KI92|IMP2L_BOVIN Mitochondrial inner membrane protease subunit 2 OS=Bos taurus
GN=IMMP2L PE=2 SV=1
Length = 177
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 28/55 (50%)
Query: 84 VSVGDVVVMKDPEKSDNYIVRRLAAIEGYEMVSTDEKDEPFVLDKDECWVLADNE 138
V GD+V + P+ + I++R+ A+EG + + K+ + + WV D+
Sbjct: 71 VQRGDIVSLVSPKNPEQKIIKRVIALEGDIVKTMGHKNRYVKVPRGHIWVEGDHH 125
>sp|Q9CQU8|IMP1L_MOUSE Mitochondrial inner membrane protease subunit 1 OS=Mus musculus
GN=Immp1l PE=2 SV=1
Length = 166
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 87 GDVVVMKDPEKSDNYIVRRLAAIEGYEMVSTDEKD 121
GD+V+ K P + I +R+ +EG +++ST D
Sbjct: 66 GDIVIAKSPSDPKSNICKRVIGLEGDKILSTSPSD 100
>sp|Q48H75|CYSG_PSE14 Siroheme synthase OS=Pseudomonas syringae pv. phaseolicola (strain
1448A / Race 6) GN=cysG PE=3 SV=1
Length = 464
Score = 30.0 bits (66), Expect = 4.1, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 52/125 (41%), Gaps = 11/125 (8%)
Query: 4 LSTWFRYIANKLEYSVSISWKSYTRGQINDIELRDSVWKYLFQGKLTYLYGNKGDQMAPV 63
L TW +L ++ +++ +G +++ R + W+ +FQG + D+
Sbjct: 143 LETWIPSTYGQLA-GLAARFRNQVKGLFPNVQQRRAFWEDVFQGAI-------ADRQLAG 194
Query: 64 MGGLGGTLLVRKLPAADPKRVSVGDV-VVMKDPEKSDNYIVRRLAAIEGYEMVSTDEKDE 122
G LL+ K+ P G+V +V P D R L ++ ++V D
Sbjct: 195 QGAEAERLLIAKIAGEPPPE--TGEVYLVGAGPGDPDLLTFRALRLMQQADVVLYDRLVA 252
Query: 123 PFVLD 127
P +LD
Sbjct: 253 PTILD 257
>sp|Q9VGP1|ZFY26_DROME Zinc finger FYVE domain-containing protein 26 homolog OS=Drosophila
melanogaster GN=CG5270 PE=1 SV=3
Length = 2243
Score = 30.0 bits (66), Expect = 4.1, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 30 QINDIELRDSVWKYLFQGKLTYLYGNKGDQMAPV-----MGGLGGTLLVRKL 76
+I +ELR S + Y+ Q K YL NK D++A + L G + ++KL
Sbjct: 2178 RIGSVELRVSSYIYIGQLKSAYLLANKHDRLADIRRILRQAELTGQVHIKKL 2229
>sp|Q9ZLQ5|LEP_HELPJ Signal peptidase I OS=Helicobacter pylori (strain J99) GN=lepB PE=3
SV=1
Length = 290
Score = 30.0 bits (66), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Query: 81 PKRVSVGDVVVMKDPEKSDNYIVRRLAAIEGYEMVSTDE 119
PKR G+VVV P + +Y V+R AI G E++ T+E
Sbjct: 86 PKR---GEVVVFIPPHEKKSYYVKRNFAIGGDEVLFTNE 121
>sp|Q86WS4|CL040_HUMAN Uncharacterized protein C12orf40 OS=Homo sapiens GN=C12orf40 PE=2
SV=3
Length = 652
Score = 29.3 bits (64), Expect = 7.5, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 76 LPAADPKRVSV----GDVVVMKDPEKSDNYIVRRLAAIEGYEMVSTDEK 120
LP+ D ++S + + +K EK +N+ V R+A + G +V D+K
Sbjct: 498 LPSEDEDQISQQIEDSNRMTIKTKEKMNNFYVERMAKLSGDRIVKNDDK 546
>sp|Q4ZRL6|CYSG_PSEU2 Siroheme synthase OS=Pseudomonas syringae pv. syringae (strain
B728a) GN=cysG PE=3 SV=1
Length = 464
Score = 29.3 bits (64), Expect = 8.3, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 52/125 (41%), Gaps = 11/125 (8%)
Query: 4 LSTWFRYIANKLEYSVSISWKSYTRGQINDIELRDSVWKYLFQGKLTYLYGNKGDQMAPV 63
L TW +L ++ +++ +G +++ R + W+ +FQG + D+
Sbjct: 143 LETWIPSSYGQLA-GLAARFRNQVKGLFPNVQQRRAFWEEVFQGAI-------ADRQLAG 194
Query: 64 MGGLGGTLLVRKLPAADPKRVSVGDV-VVMKDPEKSDNYIVRRLAAIEGYEMVSTDEKDE 122
G +L+ K+ P G+V +V P D R L ++ ++V D
Sbjct: 195 QGAEAERMLIAKIAGEPPPE--TGEVYLVGAGPGDPDLLTFRALRLMQQADVVLYDRLVA 252
Query: 123 PFVLD 127
P +LD
Sbjct: 253 PTILD 257
>sp|Q1WQZ0|F16PC_LACS1 Fructose-1,6-bisphosphatase class 3 OS=Lactobacillus salivarius
(strain UCC118) GN=fbp PE=3 SV=2
Length = 641
Score = 28.9 bits (63), Expect = 8.9, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 10 YIANKL-EYSVSISWKSYTRGQINDIELRDSVWKYLFQGKLTYLYGNK 56
Y KL ++S + K+Y++ + D D +W YL+QG L+ L+G K
Sbjct: 435 YSGKKLFDFSEKMIRKAYSKPNVKDDFATDFMW-YLWQGALSPLFGKK 481
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,783,926
Number of Sequences: 539616
Number of extensions: 2302567
Number of successful extensions: 5715
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 5704
Number of HSP's gapped (non-prelim): 27
length of query: 143
length of database: 191,569,459
effective HSP length: 106
effective length of query: 37
effective length of database: 134,370,163
effective search space: 4971696031
effective search space used: 4971696031
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)