Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>032332
MNDELCNPTLWSTTTTTTTTSTSNGVVHADSTSDANNHHLDSSGGSGNSALDEARHRYKT
SVAALRAVLTAIPNSHKAKSFEMVSSPVDSVSRSDEVEIDKLEERASLLRKELANKNKYL
KRLIDQLRDLITDISTWQSPCSV

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  032332
        (143 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2167321 - symbol:AT5G63480 "AT5G63480" species...   346  1.6e-31   1


>TAIR|locus:2167321 [details] [associations]
            symbol:AT5G63480 "AT5G63480" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0016592 "mediator complex" evidence=IDA]
            EMBL:CP002688 GO:GO:0006355 EMBL:AB007649 GO:GO:0006351
            GO:GO:0016592 EMBL:BT033074 EMBL:AK175621 IPI:IPI00538728
            RefSeq:NP_568973.1 UniGene:At.49212 UniGene:At.71117 IntAct:Q9FMV4
            PRIDE:Q9FMV4 EnsemblPlants:AT5G63480.1 GeneID:836467
            KEGG:ath:AT5G63480 TAIR:At5g63480 eggNOG:NOG254655
            HOGENOM:HOG000272682 InParanoid:Q9FMV4 OMA:ADISTWQ PhylomeDB:Q9FMV4
            ProtClustDB:CLSN2690071 Genevestigator:Q9FMV4 Uniprot:Q9FMV4
        Length = 189

 Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
 Identities = 79/154 (51%), Positives = 95/154 (61%)

Query:     1 MNDELCNPTLWXXXXXXXXXXXXNG-----VVHADSTS-DANNHHLDSSGG-----SGNS 49
             MNDELCNP+LW             G     +V AD+ + D  +HH +S+GG     SGNS
Sbjct:    39 MNDELCNPSLWSTSATPSSAATTTGSNGSALVSADAAAIDGTSHHSESAGGGGGGGSGNS 98

Query:    50 ALDEARHRYKTSVAALRAVLTAIPNSHKAKSFEMXXXXXXXXXXXXXXXIDKLEERASLL 109
              LDEA  RYK SV +LRAVL AIPNS KAK+ EM               I+KLEE+A  L
Sbjct:    99 VLDEASLRYKNSVTSLRAVLAAIPNSQKAKASEMQNGLGSPESEDE---IEKLEEQALSL 155

Query:   110 RKELANKNKYLKRLIDQLRDLITDISTWQSPCSV 143
             R E+A KN ++K LID+LR+LI DISTWQSPCSV
Sbjct:   156 RMEIAKKNVHVKELIDKLRELIADISTWQSPCSV 189


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.313   0.126   0.365    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      143       116   0.00091  102 3  11 23  0.38    31
                                                     29  0.45    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  575 (61 KB)
  Total size of DFA:  128 KB (2081 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.05u 0.10s 13.15t   Elapsed:  00:00:01
  Total cpu time:  13.05u 0.10s 13.15t   Elapsed:  00:00:01
  Start:  Sat May 11 01:54:29 2013   End:  Sat May 11 01:54:30 2013

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