Query 032333
Match_columns 143
No_of_seqs 118 out of 1037
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 20:47:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032333.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032333hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1f7s_A Actin depolymerizing fa 100.0 1.7E-45 5.7E-50 259.9 16.0 137 7-143 3-139 (139)
2 2i2q_A Cofilin; N-terminal ser 100.0 4.5E-45 1.6E-49 256.9 15.1 135 7-143 1-135 (137)
3 1cfy_A Cofilin; actin-binding, 100.0 1E-44 3.5E-49 256.8 15.9 135 7-142 1-136 (143)
4 2kvk_A Actin severing and dyna 100.0 5.1E-44 1.7E-48 253.8 16.3 133 7-142 1-133 (144)
5 1cnu_A Actophorin, ADF, cofili 100.0 2.2E-43 7.6E-48 248.2 17.0 133 10-143 1-133 (137)
6 2xfa_A Actin depolymerization 100.0 5.7E-44 2E-48 254.4 12.6 134 8-143 6-145 (148)
7 2kd5_A ADF H, actin severing a 100.0 1.2E-43 4.2E-48 251.8 14.0 134 7-143 1-134 (144)
8 2lj8_A Cofilin/actin depolymer 100.0 3.7E-43 1.3E-47 249.4 16.4 135 5-143 7-141 (144)
9 1tvj_A Cofilin; ADF, actin bin 100.0 1.1E-42 3.7E-47 252.2 16.8 135 8-143 1-154 (166)
10 1vkk_A GMF-gamma, GLIA maturat 100.0 1.6E-42 5.3E-47 248.7 15.4 134 7-142 15-150 (154)
11 1m4j_A A6 gene product, twinfi 100.0 1.1E-41 3.6E-46 241.2 11.3 130 8-143 3-139 (142)
12 1ak6_A Destrin; actin depolyme 100.0 2.3E-42 7.7E-47 252.3 7.1 136 7-143 9-162 (174)
13 1v6f_A MGMF-beta, GLIA maturat 100.0 1.5E-40 5.1E-45 237.6 16.0 132 10-143 12-145 (151)
14 2w0i_A Twinfilin-2; cytoskelet 100.0 2.7E-40 9.1E-45 232.3 14.9 128 12-143 2-135 (135)
15 2vac_A Twinfilin-2; transferas 100.0 9.7E-41 3.3E-45 234.2 12.0 126 9-140 1-133 (134)
16 2d8b_A Twinfilin-1; cell-free 100.0 1E-39 3.6E-44 236.6 14.1 132 8-143 21-160 (166)
17 1hqz_1 ABP1P, actin-binding pr 100.0 2.8E-39 9.7E-44 228.4 14.1 130 7-143 1-136 (141)
18 3daw_B Twinfilin-1, protein A6 100.0 2.7E-38 9.1E-43 228.7 16.4 132 8-143 16-155 (164)
19 3q2b_A Pfadf1, cofilin/actin-d 100.0 5.1E-40 1.7E-44 227.9 6.2 118 6-135 1-122 (124)
20 2l72_A Tgadf, actin depolymeri 100.0 1.5E-38 5E-43 224.4 11.7 116 8-136 22-138 (139)
21 1x67_A Drebrin-like protein; c 100.0 7.1E-38 2.4E-42 222.6 14.4 131 7-142 3-139 (146)
22 1t3y_A Coactosin-like protein; 100.0 2.5E-34 8.5E-39 203.3 12.9 122 15-142 6-128 (141)
23 2ff3_A Gelsolin; protein-prote 77.1 15 0.00052 25.2 7.7 85 20-120 28-112 (150)
24 3cip_G Gelsolin; actin, dictyo 76.1 15 0.0005 24.5 7.9 95 20-130 9-106 (128)
25 1t44_G Chimera of gelsolin dom 75.4 17 0.00057 24.8 7.7 85 20-120 6-90 (147)
26 3tu5_B Gelsolin, protein cordo 65.6 9.2 0.00031 29.3 4.8 94 20-129 24-120 (297)
27 2k5j_A Uncharacterized protein 43.3 15 0.00052 22.2 2.3 27 1-27 1-29 (80)
28 2vik_A Villin 14T; actin-bindi 36.6 89 0.0031 20.5 7.7 90 25-129 10-102 (126)
29 2raq_A Conserved protein MTH88 34.3 89 0.0031 19.8 5.3 52 17-69 23-74 (97)
30 1j72_A Macrophage capping prot 34.0 1.1E+02 0.0037 23.4 6.3 82 30-129 18-102 (347)
31 2ygw_A Malonyl-COA decarboxyla 30.7 23 0.00079 28.8 2.0 34 55-94 192-225 (460)
32 3vbh_A EV71, genome polyprotei 27.3 80 0.0027 24.1 4.4 16 89-104 150-165 (297)
33 1ncq_A Coat protein VP1; HRV, 26.8 82 0.0028 23.9 4.4 16 89-104 147-162 (289)
34 1fmd_1 Foot-and-mouth disease 25.8 66 0.0023 23.3 3.5 29 69-103 69-97 (208)
35 2fh1_A Gelsolin; calcium, cont 25.7 2.1E+02 0.0073 21.7 6.7 73 32-120 8-81 (344)
36 1tme_1 Theiler'S murine enceph 25.5 79 0.0027 23.9 4.1 33 70-102 121-153 (274)
37 2x3d_A SSO6206; unknown functi 25.3 98 0.0034 19.6 3.8 52 17-69 22-73 (96)
38 3bpd_A Uncharacterized protein 23.4 55 0.0019 20.9 2.4 52 17-69 23-74 (100)
39 2mev_1 Mengo virus coat protei 22.9 77 0.0026 24.0 3.5 33 70-102 121-153 (277)
40 1d0n_A Horse plasma gelsolin; 22.5 2.3E+02 0.0079 24.1 6.8 61 67-130 38-101 (729)
41 1z7s_1 Human coxsackievirus A2 21.2 1.2E+02 0.0043 23.0 4.5 14 90-103 150-163 (298)
42 3fxt_A Nucleoside diphosphate- 21.0 81 0.0028 20.5 2.9 14 86-99 99-112 (113)
43 1aym_1 HRV16, human rhinovirus 20.3 91 0.0031 23.6 3.5 15 90-104 140-154 (285)
No 1
>1f7s_A Actin depolymerizing factor (ADF); KINK in alpha-helix 3, plant protein; HET: LDA; 2.00A {Arabidopsis thaliana} SCOP: d.109.1.2
Probab=100.00 E-value=1.7e-45 Score=259.90 Aligned_cols=137 Identities=58% Similarity=1.020 Sum_probs=119.0
Q ss_pred ccccCceeCHHHHHHHHHhhccCceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeeecCCcee
Q 032333 7 MATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRK 86 (143)
Q Consensus 7 m~~sGi~is~e~~~a~~~lk~~~~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~~~~~~~ 86 (143)
|++|||.+++||+++|++++.++.+|||+|+|++++++|+|+++|++..+|+||.+.||+++|||++||+++++.+|+.+
T Consensus 3 ~~~sGi~v~~e~~~af~~~~~~~~~~~ii~~i~~~~~~i~v~~~g~~~~~~~el~~~L~~~~~rY~~~~~~~~~~~~~~~ 82 (139)
T 1f7s_A 3 NAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLPADECRYAIYDFDFVTAENCQK 82 (139)
T ss_dssp --CCCCEECHHHHHHHHHHHHHCCCSEEEEEEETTTTEEEEEEECCSSCCHHHHHTTSCTTSCEEEEEEEEEECTTSCEE
T ss_pred cCccCcEeCHHHHHHHHHHHcCCCcEEEEEEECCCCcEEEEEeecCCCCCHHHHHHhCCCCCceEEEEEeeeeccccCcc
Confidence 78999999999999999999976799999999998889999998876568999999999999999999999999999999
Q ss_pred eeEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCCCCCCHHHHHhhhC
Q 032333 87 SKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRAK 143 (143)
Q Consensus 87 ~k~vfI~w~P~~a~vk~KMlyassk~~l~~~l~gi~~~i~~~d~~dl~~~~i~~k~~ 143 (143)
+||+||+|||++|++|+||+|||+|++|++.|+|++.+||++|++||+++.|.+|++
T Consensus 83 ~k~vfI~w~P~~a~v~~KmlyAssk~~l~~~l~g~~v~i~a~d~~el~~~~i~~~~~ 139 (139)
T 1f7s_A 83 SKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVFRSRAN 139 (139)
T ss_dssp EEEEEEEECCTTSCHHHHHHHHHHHHHHHTTCTTCCEEEEECCTTC-----------
T ss_pred cCEEEEEECCCCCChhHheehHHhHHHHHHhcCCeEEEEEECChHHCCHHHHHHhhC
Confidence 999999999999999999999999999999999999999999999999999999874
No 2
>2i2q_A Cofilin; N-terminal serine, actin-binding protein; HET: LDA; 1.72A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.5e-45 Score=256.95 Aligned_cols=135 Identities=36% Similarity=0.782 Sum_probs=115.1
Q ss_pred ccccCceeCHHHHHHHHHhhccCceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeeecCCcee
Q 032333 7 MATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRK 86 (143)
Q Consensus 7 m~~sGi~is~e~~~a~~~lk~~~~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~~~~~~~ 86 (143)
|++|||++++||.++|++|+.++.+|||+|+|+.++++|++++ +..+.+|++|.+.||+++|||++||+++.+.+| .+
T Consensus 1 ~~~sGi~v~~e~~~a~~~~~~~~~~~~ii~~i~~~~~~i~v~~-~~~~~~~~el~~~L~~~~~rY~~~~~~~~~~~~-~~ 78 (137)
T 2i2q_A 1 MSFSGVKVSPECLEAFQELKLGKSLRYVVFKMNDTKTEIVVEK-KSTDKDFDTFLGDLPEKDCRYAIYDFEFNLGEG-VR 78 (137)
T ss_dssp -CCSCCEECHHHHHHHHHHHHTCCCSEEEEEECTTSSEEEEEE-EECCCCHHHHHHTSCSSSCEEEEEEEEECSSSS-CE
T ss_pred CCCCCcccCHHHHHHHHHHHCCCCceEEEEEECCCCcEEEEec-CCCCCCHHHHHHhCCCcCceEEEEEeeeecCCC-Cc
Confidence 7899999999999999999998779999999998888999987 444578999999999999999999999988777 89
Q ss_pred eeEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCCCCCCHHHHHhhhC
Q 032333 87 SKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRAK 143 (143)
Q Consensus 87 ~k~vfI~w~P~~a~vk~KMlyassk~~l~~~l~gi~~~i~~~d~~dl~~~~i~~k~~ 143 (143)
+||+||+|||++|++|+||+|||+|++|++.|+|++++||++|++||+++.+.+|++
T Consensus 79 ~k~vfI~w~Pd~a~vk~KMlyassk~~l~~~l~g~~~~i~a~d~~el~~~~i~~kl~ 135 (137)
T 2i2q_A 79 NKIIFISWSPDVAPIKSKMVYSSSKDTLRRAFTGIGTDIQATDFSEVAYETVLEKVT 135 (137)
T ss_dssp EEEEEEEECCTTSCHHHHHHHHHHHHHHHTTCCCCCEEEEECCCC------------
T ss_pred cCEEEEEECCCCCChhHhhhhHHHHHHHHHHhcCceEEEEECChHHcCHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999874
No 3
>1cfy_A Cofilin; actin-binding, cytoskeleton, actin-binding protein; 2.30A {Saccharomyces cerevisiae} SCOP: d.109.1.2 PDB: 1cof_A 1qpv_A
Probab=100.00 E-value=1e-44 Score=256.79 Aligned_cols=135 Identities=36% Similarity=0.744 Sum_probs=124.6
Q ss_pred ccccCceeCHHHHHHHHHhhccCceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeeecCC-ce
Q 032333 7 MATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDN-CR 85 (143)
Q Consensus 7 m~~sGi~is~e~~~a~~~lk~~~~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~~~~-~~ 85 (143)
|++|||.+++||.++|++++.++.+|||+|+|+.++++|+|+++++ ..+|++|.+.||+++|||++||+++.+++| +.
T Consensus 1 ~~~sGi~v~~e~~~a~~~~~~~~~~~~ii~~i~~~~~~i~v~~~g~-~~~~~el~~~L~~~~~rY~~~~~~~~~~~~~~~ 79 (143)
T 1cfy_A 1 MSRSGVAVADESLTAFNDLKLGKKYKFILFGLNDAKTEIVVKETST-DPSYDAFLEKLPENDCLYAIYDFEYEINGNEGK 79 (143)
T ss_dssp -----CEECHHHHHHHHHHHHHCCCSEEEEEECTTSSEEEEEEEEC-CCCHHHHHTTSCTTCCEEEEEEEEEECSSSCCE
T ss_pred CCcCCcEeCHHHHHHHHHHHCCCCeeEEEEEEcCCCCEEEEEecCC-CCCHHHHHHhCCCCCcEEEEEEeeeecCCCccc
Confidence 7899999999999999999998779999999998888999998886 578999999999999999999999988888 89
Q ss_pred eeeEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCCCCCCHHHHHhhh
Q 032333 86 KSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRA 142 (143)
Q Consensus 86 ~~k~vfI~w~P~~a~vk~KMlyassk~~l~~~l~gi~~~i~~~d~~dl~~~~i~~k~ 142 (143)
++||+||+|||++|++|+||+|||+|++|++.|+|++.+||++|++||+++.|.+|+
T Consensus 80 ~~k~vfI~w~Pd~a~v~~KmlyAssk~~l~~~l~g~~~~i~a~d~~el~~~~i~~kl 136 (143)
T 1cfy_A 80 RSKIVFFTWSPDTAPVRSKMVYASSKDALRRALNGVSTDVQGTDFSEVSYDSVLERV 136 (143)
T ss_dssp EEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCTTCCEEEEESSGGGGSHHHHHHHH
T ss_pred ccCEEEEEECCCCCChhheeehHhhHHHHHHhcCCceEEEEeCChHHCCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999987
No 4
>2kvk_A Actin severing and dynamics regulatory protein; ADF/cofilin, hormone; NMR {Leishmania donovani}
Probab=100.00 E-value=5.1e-44 Score=253.82 Aligned_cols=133 Identities=28% Similarity=0.583 Sum_probs=125.3
Q ss_pred ccccCceeCHHHHHHHHHhhccCceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeeecCCcee
Q 032333 7 MATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRK 86 (143)
Q Consensus 7 m~~sGi~is~e~~~a~~~lk~~~~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~~~~~~~ 86 (143)
|+.|||.++++|+++|++||.++ +||++|+|+.++++|+++.+++.+.+|+||.+.||+++|||++||+++.+. ++.+
T Consensus 1 Ma~SGv~v~de~~~af~~lk~~k-~~~vi~~I~~~~~~i~v~~~~~~~~~~~e~~~~L~~~~prY~~y~~~~~~~-~~~~ 78 (144)
T 2kvk_A 1 MAISGVTLEESVRGAIDDLRMKK-SRYVMMCIGADGKKIEVTEVGERSVNYTDLKEKFSTEKPCYVAFDFEYNDA-GSKR 78 (144)
T ss_dssp CCCCCCEECHHHHHHHHHHHTTS-SSEEEEEECTTSCEEEEEEEECTTCCHHHHHHTCCTTSCCEEEEEEEEEET-TEEE
T ss_pred CCcCCcccCHHHHHHHHHHhcCC-ceEEEEEEeCCCcEEEEEeccCCCCCHHHHHHhCCccCceEEEEEeeeccC-CCCc
Confidence 88999999999999999999976 899999999998999999888777899999999999999999999999754 5678
Q ss_pred eeEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCCCCCCHHHHHhhh
Q 032333 87 SKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRA 142 (143)
Q Consensus 87 ~k~vfI~w~P~~a~vk~KMlyassk~~l~~~l~gi~~~i~~~d~~dl~~~~i~~k~ 142 (143)
+||+||+|||++||+|+||+|||+|.+|++.|+| +++||++|++||+++.|.+|+
T Consensus 79 ~k~vfI~w~Pd~a~vk~KMlyassk~~lk~~l~~-~~~i~a~d~~el~~e~i~~kl 133 (144)
T 2kvk_A 79 EKLILIQWIPDTARPREKMMYSASRDALSSVSEG-YLPIQANDESGLDAEEIIRKV 133 (144)
T ss_dssp EEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCTT-EEEEEESSGGGGCHHHHHHHH
T ss_pred ccEEEEEECCCCCCHHHHHHHHHHHHHHHHhcCC-EEEEEECChHHCCHHHHHHHH
Confidence 9999999999999999999999999999999988 579999999999999999987
No 5
>1cnu_A Actophorin, ADF, cofilin; actin-binding protein, contractIle; 2.25A {Acanthamoeba polyphaga} SCOP: d.109.1.2 PDB: 1ahq_A
Probab=100.00 E-value=2.2e-43 Score=248.23 Aligned_cols=133 Identities=43% Similarity=0.842 Sum_probs=125.5
Q ss_pred cCceeCHHHHHHHHHhhccCceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeeecCCceeeeE
Q 032333 10 TGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRKSKI 89 (143)
Q Consensus 10 sGi~is~e~~~a~~~lk~~~~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~~~~~~~~k~ 89 (143)
|||++++||.++|++|+.++.+|||+|+|+.++++|+++++|+.+.+|++|.+.||+++|||++||+++.+.+| .++||
T Consensus 1 SGi~v~~e~~~a~~~~~~~~~~~~ii~~i~~~~~~i~v~~~g~~~~~~~el~~~L~~~~~rY~~~~~~~~~~~~-~~~k~ 79 (137)
T 1cnu_A 1 SGIAVSDDCVQKFNELKLGHQHRYVTFKMNASNTEVVVEHVGGPNATYEDFKSQLPERDCRYAIFDYEFQVDGG-QRNKI 79 (137)
T ss_dssp -CCEECHHHHHHHHHHHHHCCCSEEEEEECTTSSEEEEEEECCTTCCHHHHHTTSCTTSCEEEEEEEEEEETTE-EEEEE
T ss_pred CCCccCHHHHHHHHHHHcCCCccEEEEEEcCCCCEEEEEeccCCCCCHHHHHHhCCCCCceEEEEEeeeecCCC-CccCE
Confidence 79999999999999999986799999999988889999998865678999999999999999999999988776 89999
Q ss_pred EEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCCCCCCHHHHHhhhC
Q 032333 90 FFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRAK 143 (143)
Q Consensus 90 vfI~w~P~~a~vk~KMlyassk~~l~~~l~gi~~~i~~~d~~dl~~~~i~~k~~ 143 (143)
+||+|||++|++|+||+|||+|++|++.|+|++++||++|++||+++.|.+|++
T Consensus 80 vfI~w~Pd~a~v~~Kmlyassk~~l~~~l~g~~~~i~a~~~~el~~~~i~~kl~ 133 (137)
T 1cnu_A 80 TFILWAPDSAPIKSKMMYTSTKDSIKKKLVGIQVEVQATDAAEISEDAVSERAK 133 (137)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHHHHHSTTCCEEEEECSTTTTSHHHHHHHHT
T ss_pred EEEEECCCCCChHHheehHHhHHHHHHHhcCceEEEEECChHHCCHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999974
No 6
>2xfa_A Actin depolymerization factor 2; actin binding protein, protein binding; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=5.7e-44 Score=254.41 Aligned_cols=134 Identities=30% Similarity=0.549 Sum_probs=124.3
Q ss_pred cccCceeCHHHHHHHHHhhccCceeEEEEEEeCCCcEEEEe------ecCCCCCChHHHhhcCCCCCceEEEEeeeeeec
Q 032333 8 ATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVD------KVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTV 81 (143)
Q Consensus 8 ~~sGi~is~e~~~a~~~lk~~~~~~~ii~~i~~~~~~i~l~------~~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~~ 81 (143)
++|||.+++||.++|++++.++.+|||+|+| .++++|+++ .+++...+|++|.+.||+++|||++||++++++
T Consensus 6 m~sGi~v~~e~~~af~~~k~~k~~~~ii~~i-~~~~~i~v~~~~~~~~~g~~~~~~~~~~~~L~~~~prY~~y~~~~~~~ 84 (148)
T 2xfa_A 6 MVSGVNVSDECIYEFNRLKVKHLNKYIIYKI-ENLEKIVVDVLEHDMELTSLDNIIMRIKNNLKNTECRYIIADMPIPTP 84 (148)
T ss_dssp CCCCCEECHHHHHHHHHHHTSCCCSEEEEEE-ETTTEEEEEEEECCTTCCCHHHHHHHHHHTCBTTBCEEEEEEEEECCS
T ss_pred ccCCCeeCHHHHHHHHHHHCCCceEEEEEEE-CCCCEEEEEecccccccCCCCCCHHHHHHhCCcCCcEEEEEecccccC
Confidence 4699999999999999999987799999999 556789998 555434679999999999999999999999998
Q ss_pred CCceeeeEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCCCCCCHHHHHhhhC
Q 032333 82 DNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRAK 143 (143)
Q Consensus 82 ~~~~~~k~vfI~w~P~~a~vk~KMlyassk~~l~~~l~gi~~~i~~~d~~dl~~~~i~~k~~ 143 (143)
+|++++||+||+|||++|++|+||+|||+|++|++.|+|++++||++| +||+++.|.++|+
T Consensus 85 ~g~~~~k~vfI~w~Pd~a~vr~KMlYAssk~~lk~~l~g~~~~i~atd-~el~~~~i~~k~~ 145 (148)
T 2xfa_A 85 EGVLRDRIYFIFWSPGLSKPKEKMLYAASKESLVRKINGIFKSLEITC-DINEFEEELKAII 145 (148)
T ss_dssp SCCCEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTTCTTCSEEEEECS-CGGGHHHHHHHHH
T ss_pred CCCcccCEEEEEECCCCCChHHHhHhHHHHHHHHHHhcCCeEEEEEEc-ccCCHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999 9999999999873
No 7
>2kd5_A ADF H, actin severing and dynamics regulatory protein; cofilin, solution structure, hormone; NMR {Leishmania donovani} PDB: 2kvk_A
Probab=100.00 E-value=1.2e-43 Score=251.78 Aligned_cols=134 Identities=28% Similarity=0.588 Sum_probs=126.0
Q ss_pred ccccCceeCHHHHHHHHHhhccCceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeeecCCcee
Q 032333 7 MATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRK 86 (143)
Q Consensus 7 m~~sGi~is~e~~~a~~~lk~~~~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~~~~~~~ 86 (143)
|++|||.+++||+++|++++.++ +||++|+|+.++++|+|+++|..+.+|++|.+.||+++|||++||+++++++ +++
T Consensus 1 Ms~SGi~vs~e~~~a~~~~~~~~-~~~ii~~i~~~~~~i~v~~~g~~~~~~~el~~~L~~~~~rY~~~~~~~~~~~-~~~ 78 (144)
T 2kd5_A 1 MAISGVTLEESVRGAIDDLRMKK-SRYVMMCIGADGKKIEVTEVGERSVNYTDLKEKFSTEKPCYVAFDFEYNDAG-SKR 78 (144)
T ss_dssp CCCCSCBCCHHHHHHHHHHTTTS-SSEEEEEECSSSCBEEEEEECCSCCCHHHHTTTTSCSSCEEEEEEEEEESSS-CEE
T ss_pred CCccCCCcCHHHHHHHHHHHcCC-eeEEEEEECCCCCEEEEEeccCCCCCHHHHHHhCCccCcEEEEEEEEecCCC-CCc
Confidence 55599999999999999999988 9999999998888999999887678999999999999999999999998776 678
Q ss_pred eeEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCCCCCCHHHHHhhhC
Q 032333 87 SKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRAK 143 (143)
Q Consensus 87 ~k~vfI~w~P~~a~vk~KMlyassk~~l~~~l~gi~~~i~~~d~~dl~~~~i~~k~~ 143 (143)
+||+||+|||++|++|+||+|||+|.+|++.|+|+ ++||++|++||+++.|.+||+
T Consensus 79 ~k~vfI~w~Pd~a~vk~KMlyAssk~~l~~~l~g~-~~i~a~d~~el~~~~i~~kl~ 134 (144)
T 2kd5_A 79 EKLILIQWIPDTARPREKMMYSASRDALSSVSEGY-LPIQANDESGLDAEEIIRKVR 134 (144)
T ss_dssp EEEEEEEECCCCSCSHHHHHHHHHGGGGTTTTCCS-EEEEESSSSSSSHHHHHHHHH
T ss_pred cCEEEEEECCCCCCHHHHhhhHHHHHHHHHHhCCe-EEEEECChHHCCHHHHHHHHh
Confidence 99999999999999999999999999999999999 999999999999999999873
No 8
>2lj8_A Cofilin/actin depolymerizing factor, putative; protein binding; NMR {Trypanosoma brucei}
Probab=100.00 E-value=3.7e-43 Score=249.40 Aligned_cols=135 Identities=32% Similarity=0.660 Sum_probs=121.9
Q ss_pred ccccccCceeCHHHHHHHHHhhccCceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeeecCCc
Q 032333 5 FKMATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNC 84 (143)
Q Consensus 5 ~~m~~sGi~is~e~~~a~~~lk~~~~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~~~~~ 84 (143)
-+|++|||.+++||+++|++||.++ .||++|+|+++ ++++++..+..+.+|++|.+.||+++|||++|++.+.+.+ +
T Consensus 7 ~~Ma~SGi~vsde~~~af~~lk~~k-~~~ii~~i~d~-~~~vv~~~~~~~~~~de~~~~L~~~~prY~~y~~~~~~~~-~ 83 (144)
T 2lj8_A 7 HHMAMSGVSVADECVTALNDLRHKK-SRYVIMHIVDQ-KSIAVKTIGERGANFDQFIEAIDKNVPCYAAFDFEYTTND-G 83 (144)
T ss_dssp --CCCSSCEECHHHHHHHHHHTTTS-SSEEEEEEETT-TEEEEEEECSSCCCHHHHHHHCCSSSCEEEEEEEEECSSS-S
T ss_pred CccccCCceeCHHHHHHHHHHhcCC-ceEEEEEEECC-cEEEEEecCCCCCCHHHHHHhCcccCCcceeeeeeeccCC-C
Confidence 3799999999999999999999876 89999999876 4666777776678999999999999999999999998765 4
Q ss_pred eeeeEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCCCCCCHHHHHhhhC
Q 032333 85 RKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRAK 143 (143)
Q Consensus 85 ~~~k~vfI~w~P~~a~vk~KMlyassk~~l~~~l~gi~~~i~~~d~~dl~~~~i~~k~~ 143 (143)
.++||+||+|||++||+|+||+|||+|++|++.|+|++ +||++|++||+++.|.+||+
T Consensus 84 ~~~k~vfI~w~Pd~a~vk~KMlYASsk~~l~~~l~~~~-~i~a~d~~el~~e~i~~kl~ 141 (144)
T 2lj8_A 84 PRDKLILISWNPDSGAPRTKMLYSSSRDALVPLTQGFQ-GIQANDASGLDFEEISRKVK 141 (144)
T ss_dssp SEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHTTTSE-EEECCGGGTSCHHHHHHHHH
T ss_pred CcccEEEEEEcCCCCCHHHHHHHHHHHHHHHHHhCCee-EEEeCChHHCCHHHHHHHHh
Confidence 67899999999999999999999999999999999886 89999999999999999873
No 9
>1tvj_A Cofilin; ADF, actin binding protein, actin depolymerizing factor, actin-binding protein; NMR {Gallus gallus}
Probab=100.00 E-value=1.1e-42 Score=252.24 Aligned_cols=135 Identities=29% Similarity=0.600 Sum_probs=124.4
Q ss_pred cccCceeCHHHHHHHHHhhccC---------ceeEEEEEEeCCCcEEEEee--------cCCC-CCChHHHhhcCCCCCc
Q 032333 8 ATTGMWVADECKNSFMEMKWKK---------VHRYIVFKIDEKSKLVTVDK--------VGGA-GEGYEDLAASLPDDDC 69 (143)
Q Consensus 8 ~~sGi~is~e~~~a~~~lk~~~---------~~~~ii~~i~~~~~~i~l~~--------~~~~-~~~~~e~~~~l~~~~p 69 (143)
++|||.+++||+++|++|+.++ .+||+||+|+++++.|++++ .++. ..+|++|.+.||+++|
T Consensus 1 m~SGi~vs~e~~~~f~~~k~~k~~~~~~~~~~~~~iifki~~~~~~iivee~~~~~~~~~~~~~~~~~~ef~~~L~~~~p 80 (166)
T 1tvj_A 1 MASGVTVNDEVIKVFNDMKVRKSSTPEEIKKRKKAVLFCLSDDKKQIIVEEAKQILVGDIGDTVEDPYTAFVKLLPLNDC 80 (166)
T ss_dssp CCCCCEECHHHHHHHHHHHSCCCSCHHHHTTCEEEEEEEECTTSSEEEEEEEEEEETTTBTTTBSCHHHHHHHHCCTTSC
T ss_pred CCCCCeeCHHHHHHHHHHhcCCCccccccccceeEEEEEECCCCcEEEEeccccccccccCccccCCHHHHHHhCCCCCc
Confidence 5799999999999999999885 48999999999888899886 3432 4689999999999999
Q ss_pred eEEEEeeeeeecCCceeeeEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCCCCC-CHHHHHhhhC
Q 032333 70 RYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEM-GFDVIMDRAK 143 (143)
Q Consensus 70 ry~~y~~~~~~~~~~~~~k~vfI~w~P~~a~vk~KMlyassk~~l~~~l~gi~~~i~~~d~~dl-~~~~i~~k~~ 143 (143)
||++||++|.++++ .++||+||+|||++|++|+||+|||+|++|++.|+|++++||++|++|| +++.|.+||.
T Consensus 81 rY~vy~~~~~~~~~-~~~klvfI~W~Pd~a~vr~KMlYAssk~~lk~~l~gi~~~i~atd~~el~~~~~i~ekl~ 154 (166)
T 1tvj_A 81 RYALYDATYETKES-KKEDLVFIFWAPESAPLKSKMIYASSKDAIKKKFTGIKHEWQVNGLDDIKDRSTLGEKLG 154 (166)
T ss_dssp EEEEEEEEEEESSC-EEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHTTTTCCCEEEESSGGGTCCHHHHHHHHT
T ss_pred EEEEEeccccCCCC-CccCEEEEEECCCCCCHHHhhHHHHhHHHHHHHhcCCeEEEEECChHHcCCHHHHHHHhC
Confidence 99999999988775 8999999999999999999999999999999999999999999999999 9999999974
No 10
>1vkk_A GMF-gamma, GLIA maturation factor gamma; 15079298, structural GEN JCSG, protein structure initiative, PSI, joint center for S genomics; 1.35A {Mus musculus} SCOP: d.109.1.2 PDB: 1wfs_A 3l50_A
Probab=100.00 E-value=1.6e-42 Score=248.66 Aligned_cols=134 Identities=19% Similarity=0.315 Sum_probs=124.2
Q ss_pred ccccCceeCHHHHHHHHHhhccC--ceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeeecCCc
Q 032333 7 MATTGMWVADECKNSFMEMKWKK--VHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNC 84 (143)
Q Consensus 7 m~~sGi~is~e~~~a~~~lk~~~--~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~~~~~ 84 (143)
.+.+|++++++|.++|++|+.++ +++||+|+|+.++++|+|+++++ +.+|+||.+.||+++|||++||+++++++|+
T Consensus 15 ~~~~~~~v~~e~~~a~~~lk~~k~~~~~~iifkId~~~~~I~v~~~~~-~~~~~e~~~~Lp~~~pRY~vy~~~~~~~~g~ 93 (154)
T 1vkk_A 15 DSLVVCEVDPELKETLRKFRFRKETNNAAIIMKVDKDRQMVVLEDELQ-NISPEELKLELPERQPRFVVYSYKYVHDDGR 93 (154)
T ss_dssp ---CCCEECHHHHHHHHHHHTCCCCSCEEEEEEEETTTTEEEEEEEEE-SCCHHHHHHHSCSSSCEEEEEECCEECTTSC
T ss_pred ccccceeeCHHHHHHHHHHHhcccCCccEEEEEEcCCCCEEEEEEcCC-CCCHHHHHHhCCCCCcEEEEEEeeeccCCCc
Confidence 45689999999999999999874 68999999999888999998664 4689999999999999999999999998888
Q ss_pred eeeeEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCCCCCCHHHHHhhh
Q 032333 85 RKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRA 142 (143)
Q Consensus 85 ~~~k~vfI~w~P~~a~vk~KMlyassk~~l~~~l~gi~~~i~~~d~~dl~~~~i~~k~ 142 (143)
.++|++||+|||++|++|+||+|||+|++|++.| |++++|||+|++||+++.|.++|
T Consensus 94 ~~~klvFI~w~P~~a~vk~KMlYAssk~~l~~~l-gi~~~iea~d~~El~~e~i~~kl 150 (154)
T 1vkk_A 94 VSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTA-ELTKVFEIRTTDDLTETWLKEKL 150 (154)
T ss_dssp EECCEEEEEECCTTSCHHHHHHHHHHHHHHHHHT-TCCCEEEESSGGGCCHHHHHHHH
T ss_pred ccccEEEEEECCCCCChhhhhhhHhhHHHHHHhh-CceEEEEECChHhCCHHHHHHHH
Confidence 9999999999999999999999999999999999 89999999999999999999987
No 11
>1m4j_A A6 gene product, twinfilin; mixed beta-sheet, PAIR of alpha-helices, structural protein; 1.60A {Mus musculus} SCOP: d.109.1.2
Probab=100.00 E-value=1.1e-41 Score=241.23 Aligned_cols=130 Identities=25% Similarity=0.427 Sum_probs=115.1
Q ss_pred cccCceeCHHHHHHHHHhhccCceeEEEEEEeCCCcEEEEeecCCCC----CChHHHhhcC-CCCCceEEEEeeeeeecC
Q 032333 8 ATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAG----EGYEDLAASL-PDDDCRYAVFDFDFVTVD 82 (143)
Q Consensus 8 ~~sGi~is~e~~~a~~~lk~~~~~~~ii~~i~~~~~~i~l~~~~~~~----~~~~e~~~~l-~~~~pry~~y~~~~~~~~ 82 (143)
++|||.+++||.++|++++.++ +||++|+|+++ +|+++++++.+ .+|++|++.| |+++|||++||+++.+.+
T Consensus 3 m~SGi~v~~e~~~~f~~~k~~k-~~~ii~~i~~~--~ivv~~~~~~~~~~~~~~~e~~~~l~~~~~~rY~~~~~~~~~~~ 79 (142)
T 1m4j_A 3 HQTGIQASEDVKEIFARARNGK-YRLLKISIENE--QLVVGSCSPPSDSWEQDYDSFVLPLLEDKQPCYVLFRLDSQNAQ 79 (142)
T ss_dssp ----CCBCHHHHHHHHHHHTTT-CSEEEEEECSS--SEEEEEEECCCSCHHHHHHHHHGGGCCTTCCEEEEEEEEEEETT
T ss_pred CcCCCeECHHHHHHHHHHhcCC-eEEEEEEEcCC--EEEEEeecCCCccccccHHHHHHhhCCCCCceEEEEEcCcCCCC
Confidence 3799999999999999999987 99999999875 88898887654 3478999998 799999999999987754
Q ss_pred CceeeeEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeE--EEEeCCCCCCCHHHHHhhhC
Q 032333 83 NCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHY--EVQATDPTEMGFDVIMDRAK 143 (143)
Q Consensus 83 ~~~~~k~vfI~w~P~~a~vk~KMlyassk~~l~~~l~gi~~--~i~~~d~~dl~~~~i~~k~~ 143 (143)
++||+||+|||++||+|+||+|||||++|++.|+|++. +|||+|++||+++.+.++++
T Consensus 80 ---~~k~vfI~w~Pd~a~vr~KMlYAssk~~lk~~l~g~~~~~~i~atd~~el~~~~i~~~l~ 139 (142)
T 1m4j_A 80 ---GYEWIFIAWSPDHSHVRQKMLYAATRATLKKEFGGGHIKDEVFGTVKEDVSLHGYKKYLL 139 (142)
T ss_dssp ---EEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHCGGGEEEEEEESSHHHHSHHHHHHHHC
T ss_pred ---CceEEEEEEcCCCCCHHHHHHHHHHHHHHHHHcCCceeEEEEEeCChHHCCHHHHHHHHh
Confidence 59999999999999999999999999999999999777 99999999999999999874
No 12
>1ak6_A Destrin; actin depolymerization factor, actin-binding protein; NMR {Homo sapiens} SCOP: d.109.1.2 PDB: 1ak7_A 1q8g_A 1q8x_A 3j0s_M
Probab=100.00 E-value=2.3e-42 Score=252.26 Aligned_cols=136 Identities=32% Similarity=0.643 Sum_probs=123.7
Q ss_pred ccccCceeCHHHHHHHHHhhccC---------ceeEEEEEEeCCCcEEEEeec--------CCC-CCChHHHhhcCCCCC
Q 032333 7 MATTGMWVADECKNSFMEMKWKK---------VHRYIVFKIDEKSKLVTVDKV--------GGA-GEGYEDLAASLPDDD 68 (143)
Q Consensus 7 m~~sGi~is~e~~~a~~~lk~~~---------~~~~ii~~i~~~~~~i~l~~~--------~~~-~~~~~e~~~~l~~~~ 68 (143)
+++|||.+++||+++|++++.++ .+|||||+|+++++.|++++. |.. ..+|++|.+.||+++
T Consensus 9 ~m~SGi~vs~e~~~~f~~~k~~ks~~~~~~~~~~~~iifki~~~~~~Iivee~~~~~~~~~g~~~~~~~~ef~~~L~~~~ 88 (174)
T 1ak6_A 9 NSASGVQVADEVCRIFYDMKVRKCSTPEEIKKRKKAVIFCLSADKKCIIVEEGKEILVGDVGVTITDPFKHFVGMLPEKD 88 (174)
T ss_dssp TTTTCCCCCSHHHHHHHHTSSSCCSSHHHHGGGCCCEECCCSTTSCSCCCCSSCCCCSSSTTTTCCSSSHHHHHTSCSSC
T ss_pred cccCCCccCHHHHHHHHHHHcCCcccccccccceeEEEEEECCCCcEEEEeccccccccccCcccCCCHHHHHHhCCCCC
Confidence 35799999999999999999984 589999999988778888763 221 468999999999999
Q ss_pred ceEEEEeeeeeecCCceeeeEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCCCCCCHHHHHhhhC
Q 032333 69 CRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRAK 143 (143)
Q Consensus 69 pry~~y~~~~~~~~~~~~~k~vfI~w~P~~a~vk~KMlyassk~~l~~~l~gi~~~i~~~d~~dl~~~~i~~k~~ 143 (143)
|||++||++|.+++| +++||+||+|||++|++|+||+|||+|++|++.|+|++++||++|++||+++.|.+||.
T Consensus 89 prY~ly~~~~~~~~~-~~~klvfI~W~Pd~a~vk~KMlYAssk~~lk~~l~gi~~~i~atd~~El~~e~i~~kl~ 162 (174)
T 1ak6_A 89 CRYALYDASFETKES-RKEELMFFLWAPELAPLKSKMIYASSKDAIKKKFQGIKHECQANGPEDLNRACIAEKLG 162 (174)
T ss_dssp CCCEECCCCCCCSSC-SCCCCCEEEECCSSSCHHHHHSHHHHHHHHHHHCTTCSCCEEESSTTTTCHHHHHHHTT
T ss_pred cEEEEEeCcccCCCC-ccccEEEEEECCCCCCHHHhhHHHHHHHHHHHHhcCCeEEEEECChhhcCHHHHHHHhc
Confidence 999999999877775 89999999999999999999999999999999999999999999999999999999974
No 13
>1v6f_A MGMF-beta, GLIA maturation factor, beta; actin binding protein, cytoskeleton, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.109.1.2
Probab=100.00 E-value=1.5e-40 Score=237.64 Aligned_cols=132 Identities=20% Similarity=0.352 Sum_probs=122.9
Q ss_pred cCceeCHHHHHHHHHhhccC--ceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeeecCCceee
Q 032333 10 TGMWVADECKNSFMEMKWKK--VHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRKS 87 (143)
Q Consensus 10 sGi~is~e~~~a~~~lk~~~--~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~~~~~~~~ 87 (143)
..++++++|.++|++|+.++ +++||+|+|+.++++|+|+++++ +.+|+||.+.||+++|||++||++|.+.+|+.++
T Consensus 12 ~~~~v~~e~~~a~~~lr~~k~~~~~~iifki~~~~~~I~v~~~~~-~~~~~el~~~Lp~~~prY~~~~~~~~~~~~~~~~ 90 (151)
T 1v6f_A 12 VVCDVAEDLVEKLRKFRFRKETHNAAIIMKIDKDERLVVLDEELE-GVSPDELKDELPERQPRFIVYSYKYQHDDGRVSY 90 (151)
T ss_dssp CCCEECHHHHHHHHHHHTCCCSSCEEEEEEECSSSCEEEEEEEEE-SCCHHHHGGGSCSSSCEEEEEECCEECTTSCEEC
T ss_pred eEEEECHHHHHHHHHHHhccCCCccEEEEEEcCCCcEEEEEecCC-CCCHHHHHhhCCCCCceEEEEecccccCCCcccc
Confidence 34779999999999999975 58999999999888999998765 4689999999999999999999999998888999
Q ss_pred eEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCCCCCCHHHHHhhhC
Q 032333 88 KIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRAK 143 (143)
Q Consensus 88 k~vfI~w~P~~a~vk~KMlyassk~~l~~~l~gi~~~i~~~d~~dl~~~~i~~k~~ 143 (143)
|++||+|||++|++|+||+|||+|.+|++.| |++++||++|++||+++.|.+||+
T Consensus 91 k~vfI~w~P~~a~vk~KMlYAssk~~l~~~l-gi~~~iea~d~~El~~~~i~~kl~ 145 (151)
T 1v6f_A 91 PLCFIFSSPVGCKPEQQMMYAGSKNKLVQTA-ELTKVFEIRNTEDLTEEWLREKLG 145 (151)
T ss_dssp CEEEEEECCTTSCHHHHHHHHHHHHHHHHHT-TCSEEEEESSGGGCCHHHHHHHHH
T ss_pred cEEEEEECCCCCChHHheehHHHHHHHHHHh-CCeEEEEECChHHCCHHHHHHHHc
Confidence 9999999999999999999999999999999 899999999999999999999873
No 14
>2w0i_A Twinfilin-2; cytoskeleton, actin-binding, actin binding, cofilin-like, phosphoprotein, phosphorylation, transferase, protein tyros kinase-9; 1.8A {Homo sapiens}
Probab=100.00 E-value=2.7e-40 Score=232.29 Aligned_cols=128 Identities=20% Similarity=0.351 Sum_probs=119.9
Q ss_pred ceeCHHHHHHHHHhhccCceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeeecCCceeeeEEE
Q 032333 12 MWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRKSKIFF 91 (143)
Q Consensus 12 i~is~e~~~a~~~lk~~~~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~~~~~~~~k~vf 91 (143)
++|+++|.++|++|+.++ ++||+|+|+.++++|+|++++ +.++++|.+.||+++|||++||+++++.+ +.++|++|
T Consensus 2 ~~v~~e~~~a~~~lk~~~-~~~ii~~id~~~~~I~v~~~~--~~~~~el~~~Lp~~~~rY~~y~~~~~~~~-~~~~k~vf 77 (135)
T 2w0i_A 2 MPLQPEAQRALQQLKQKM-VNYIQMKLDLERETIELVHTE--PTDVAQLPSRVPRDAARYHFFLYKHTHEG-DPLESVVF 77 (135)
T ss_dssp CCBCHHHHHHHHHHHTTS-CSEEEEEEETTTTEEEEEECC--CCCGGGGGGGSCSSSCEEEEEEEEEEETT-EEEEEEEE
T ss_pred cccCHHHHHHHHHHHcCC-CcEEEEEEeCCCCEEEEEecC--CCCHHHHHhhCCCCCcEEEEEecccccCC-CCCccEEE
Confidence 679999999999999987 999999999988899999876 47899999999999999999999998765 48999999
Q ss_pred EEEcCC-CCCcchhhhhhhhHHHHHHhcC---Cee--EEEEeCCCCCCCHHHHHhhhC
Q 032333 92 IAWAPT-ASRIRAKMLYATSKDGLRRVLD---GIH--YEVQATDPTEMGFDVIMDRAK 143 (143)
Q Consensus 92 I~w~P~-~a~vk~KMlyassk~~l~~~l~---gi~--~~i~~~d~~dl~~~~i~~k~~ 143 (143)
|+|||+ +|++|+||+|||+|+.|++.|. |++ ++|||+|++||+++.|.++++
T Consensus 78 I~w~P~~~~~vk~kMlYassk~~l~~~l~~~~Gi~v~~~iea~d~~el~~~~i~~kl~ 135 (135)
T 2w0i_A 78 IYSMPGYKCSIKERMLYSSCKSRLLDSVEQDFHLEIAKKIEIGDGAELTAEFLDDEVH 135 (135)
T ss_dssp EEECCGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCGGGCCHHHHHHHHC
T ss_pred EEECCCCCCCHHHHhHhHHhHHHHHHHHhhccCCceeEEEEcCChhhcCHHHHHHhhC
Confidence 999999 9999999999999999999998 866 999999999999999999985
No 15
>2vac_A Twinfilin-2; transferase, actin binding, phosphorylation, cofilin-like, cytoskeleton, actin-binding, protein tyrosine kinase-9; 1.70A {Homo sapiens}
Probab=100.00 E-value=9.7e-41 Score=234.20 Aligned_cols=126 Identities=21% Similarity=0.393 Sum_probs=115.0
Q ss_pred ccCceeCHHHHHHHHHhhccCceeEEEEEEeCCCcEEEEeecCCCC----CChHHHhhcC-CCCCceEEEEeeeeeecCC
Q 032333 9 TTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAG----EGYEDLAASL-PDDDCRYAVFDFDFVTVDN 83 (143)
Q Consensus 9 ~sGi~is~e~~~a~~~lk~~~~~~~ii~~i~~~~~~i~l~~~~~~~----~~~~e~~~~l-~~~~pry~~y~~~~~~~~~ 83 (143)
+|||.+++||.++|++++.++ +|||+|+|+++ +|++++.++.. .+|++|++.| |+++|||++||+++.+.+
T Consensus 1 ~SGi~v~~e~~~~f~~~k~~k-~r~ii~~i~~~--~ivv~~~~~~~~~~~~~~~~~~~~l~~~~~prY~v~~~~~~~~~- 76 (134)
T 2vac_A 1 SMGIHATEELKEFFAKARAGS-VRLIKVVIEDE--QLVLGASQEPVGRWDQDYDRAVLPLLDAQQPCYLLYRLDSQNAQ- 76 (134)
T ss_dssp CCSCEECHHHHHHHHHHHHSS-CSEEEEEEETT--EEEEEEEECCCSCHHHHHHHHHGGGCCTTCCEEEEEEEEEEETT-
T ss_pred CCCcEeCHHHHHHHHHHhcCC-eEEEEEEecCC--EEEEEeecCcCcccccCHHHHHHhcCCCCCCEEEEEECCcCCCC-
Confidence 699999999999999999988 99999999875 89999887654 2478999998 689999999999987764
Q ss_pred ceeeeEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeE--EEEeCCCCCCCHHHHHh
Q 032333 84 CRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHY--EVQATDPTEMGFDVIMD 140 (143)
Q Consensus 84 ~~~~k~vfI~w~P~~a~vk~KMlyassk~~l~~~l~gi~~--~i~~~d~~dl~~~~i~~ 140 (143)
++||+||+|||++|++|+||+|||||++|++.|+|++. +|||+|++||+++.+++
T Consensus 77 --~~k~vfI~w~Pd~a~vr~KMlYAssk~~lk~~l~g~~~~~~i~atd~~el~~~~~~~ 133 (134)
T 2vac_A 77 --GFEWLFLAWSPDNSPVRLKMLYAATRATVKKEFGGGHIKDELFGTVKDDLSFAGYQK 133 (134)
T ss_dssp --EEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHCGGGEEEEEEESSHHHHSHHHHHH
T ss_pred --CceEEEEEEcCCCCCHHHHhHHHHHHHHHHHHcCCCeeeEEEEeCChHHcCHHHHhc
Confidence 49999999999999999999999999999999999776 99999999999999875
No 16
>2d8b_A Twinfilin-1; cell-free protein synthesis, actin-binding protein, developmental regulation, cellular remodeling, cytoskeleton, morphology; NMR {Mus musculus}
Probab=100.00 E-value=1e-39 Score=236.55 Aligned_cols=132 Identities=20% Similarity=0.390 Sum_probs=123.2
Q ss_pred cccCce--eCHHHHHHHHHhhccCceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeeecCCce
Q 032333 8 ATTGMW--VADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCR 85 (143)
Q Consensus 8 ~~sGi~--is~e~~~a~~~lk~~~~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~~~~~~ 85 (143)
+.||+. ++++|.++|++|+.+ +++||+|+|+.++++|+|++++ ..+|++|.+.||+++|||++||+++.+.++ .
T Consensus 21 ~~sgv~~~v~~e~~~a~~~lk~~-~~~~vifkId~~~~~I~v~~~~--~~~~~el~~~Lp~~~pRY~~y~~~~~~~~~-~ 96 (166)
T 2d8b_A 21 TLQGVAFPISRDAFQALEKLSKK-QLNYVQLEIDIKNETIILANTE--NTELRDLPKRIPKDSARYHFFLYKHSHEGD-Y 96 (166)
T ss_dssp CSCCCCCCBCHHHHHHHHHHHTT-CCSCCEEEEETTTTEEEEEECC--CCCSTTHHHHSCSSCCEEEEEEEEEEETTE-E
T ss_pred ccCCcccCcCHHHHHHHHHHHcC-CCcEEEEEEeCCCCEEEEEecC--CCCHHHHHHhCCCCCceEEEEeccccCCCC-c
Confidence 349999 999999999999998 5999999999988899999877 468999999999999999999999988765 6
Q ss_pred eeeEEEEEEcCC-CCCcchhhhhhhhHHHHHHhcC---Ce--eEEEEeCCCCCCCHHHHHhhhC
Q 032333 86 KSKIFFIAWAPT-ASRIRAKMLYATSKDGLRRVLD---GI--HYEVQATDPTEMGFDVIMDRAK 143 (143)
Q Consensus 86 ~~k~vfI~w~P~-~a~vk~KMlyassk~~l~~~l~---gi--~~~i~~~d~~dl~~~~i~~k~~ 143 (143)
++|++||+|||+ +|++|+||+|||+|..|++.|. |+ +++||++|++||+++.|.++|+
T Consensus 97 ~~k~vFI~w~P~~~~~ik~KMlYAssk~~l~~~l~~~~Gi~v~~~iea~d~~El~~~~i~~kl~ 160 (166)
T 2d8b_A 97 LESVVFIYSMPGYTCSIRERMLYSSCKSPLLEIVERQLQMDVIRKIEIDNGDELTADFLYDEVH 160 (166)
T ss_dssp EEEEEEEEECCCSSSCHHHHHHHHHTTHHHHHHHTTSSCCCCSEEEEESSSTTCCHHHHHHHHH
T ss_pred cccEEEEEECCCCCCCHHHeeehhhhHHHHHHHHhhccCCceeEEEEeCChHHCCHHHHHHHhC
Confidence 999999999999 9999999999999999999999 87 8999999999999999999873
No 17
>1hqz_1 ABP1P, actin-binding protein; cofilin homology domain, NEW YORK SGX researc for structural genomics, NYSGXRC, structural genomics, PSI; 2.10A {Saccharomyces cerevisiae} SCOP: d.109.1.2
Probab=100.00 E-value=2.8e-39 Score=228.38 Aligned_cols=130 Identities=14% Similarity=0.330 Sum_probs=118.2
Q ss_pred ccccCceeC---HHHHHHHHHhhccC--ceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeeec
Q 032333 7 MATTGMWVA---DECKNSFMEMKWKK--VHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTV 81 (143)
Q Consensus 7 m~~sGi~is---~e~~~a~~~lk~~~--~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~~ 81 (143)
|+.+||.++ ++|+++|++++.++ .+|||+|+|++ +++|+|+.+|+ +|+||.+.||+++|||++||++ .
T Consensus 1 ~~m~~i~l~~~~~e~~~a~~~~~~~~~~~~~~ii~~i~~-~~~i~v~~~g~---~~~el~~~l~~~~~rY~~~~~~---~ 73 (141)
T 1hqz_1 1 MALEPIDYTTHSREIDAEYLKIVRGSDPDTTWLIISPNA-KKEYEPESTGS---SFHDFLQLFDETKVQYGLARVS---P 73 (141)
T ss_dssp --CCCCCCSTTHHHHHHHHHHHHHTCCTTCCEEEEEECT-TSCEEEEEEES---CHHHHHTCCCTTSCEEEEEEEC---C
T ss_pred CcccccccCCCCHHHHHHHHHHHhCCCCCceEEEEEEcC-CCEEEEEeecC---CHHHHHhhCCCCceEEEEEEEe---c
Confidence 567788884 99999999999984 69999999998 46899998875 8999999999999999999997 4
Q ss_pred CCceeeeEEEEEEcCCCCCcchhhhhhhhHHHHHH-hcCCeeEEEEeCCCCCCCHHHHHhhhC
Q 032333 82 DNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRR-VLDGIHYEVQATDPTEMGFDVIMDRAK 143 (143)
Q Consensus 82 ~~~~~~k~vfI~w~P~~a~vk~KMlyassk~~l~~-~l~gi~~~i~~~d~~dl~~~~i~~k~~ 143 (143)
+|+.++||+||+|||++|++|+||+|||+|++|++ .|+|++.+|++++++||+++.|.++++
T Consensus 74 ~~~~~~k~vfI~w~Pd~~~vk~Kmlyas~k~~l~~~~l~g~~~~i~a~~~~el~~e~i~~kl~ 136 (141)
T 1hqz_1 74 PGSDVEKIIIIGWCPDSAPLKTRASFAANFAAVANNLFKGYHVQVTARDEDDLDENELLMKIS 136 (141)
T ss_dssp TTCSCCEEEEEEECCTTSCHHHHHHHHHHHHHHHHHTSCSCSEEEEESSGGGGCHHHHHHHHH
T ss_pred CCCceeeEEEEEECCCCCChhheEEEeccHHHHHHHhCCceEEEEEECChHHCCHHHHHHHHH
Confidence 57889999999999999999999999999999997 999999999999999999999999873
No 18
>3daw_B Twinfilin-1, protein A6; actin depolymerisation, actin binding proteins, cytoskeleton, structural protein/contractIle protein complex; HET: ATP; 2.55A {Mus musculus} PDB: 2hd7_A
Probab=100.00 E-value=2.7e-38 Score=228.68 Aligned_cols=132 Identities=20% Similarity=0.382 Sum_probs=120.5
Q ss_pred cccCc--eeCHHHHHHHHHhhccCceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeeecCCce
Q 032333 8 ATTGM--WVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCR 85 (143)
Q Consensus 8 ~~sGi--~is~e~~~a~~~lk~~~~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~~~~~~ 85 (143)
+.+|| +|+++|.++|++|+.++ ++||+|+|+.++++|+|+++ . +.+|++|.+.||+++|||++|++++.++ |+.
T Consensus 16 ~~~gv~~~v~~e~~~a~~~lk~~~-~~~iifkId~~~e~I~v~~~-~-~~~~~df~~~Lp~~~pRY~vyd~~~~~~-g~~ 91 (164)
T 3daw_B 16 TLQGVAFPISRDAFQALEKLSKKQ-LNYVQLEIDIKNETIILANT-E-NTELRDLPKRIPKDSARYHFFLYKHSHE-GDY 91 (164)
T ss_dssp --CCCCCCBCHHHHHHHHHHHTTS-CSEEEEEEETTTTEEEEEEC-C-CCCGGGSGGGSCSSSCEEEEEEEEEEET-TEE
T ss_pred ccCcceEEECHHHHHHHHHHHcCC-ceEEEEEEeCCCCEEEEEeC-C-CCCHHHHHHhCCccCceEEEEecccccC-CCc
Confidence 34777 69999999999999985 99999999998899999887 3 4799999999999999999999999776 666
Q ss_pred eeeEEEEEEcCC-CCCcchhhhhhhhHHHHHHhcC---Ce--eEEEEeCCCCCCCHHHHHhhhC
Q 032333 86 KSKIFFIAWAPT-ASRIRAKMLYATSKDGLRRVLD---GI--HYEVQATDPTEMGFDVIMDRAK 143 (143)
Q Consensus 86 ~~k~vfI~w~P~-~a~vk~KMlyassk~~l~~~l~---gi--~~~i~~~d~~dl~~~~i~~k~~ 143 (143)
..+++||+|||+ +|++|+||+|||+|++|++.|. |+ +++||++|++||+++.|.++|+
T Consensus 92 ~~~~ifi~~~P~~~a~ik~kMlYASsK~~l~~~l~~~~Gi~i~k~iea~d~~Elt~e~l~ekl~ 155 (164)
T 3daw_B 92 LESVVFIYSMPGYTCSIRERMLYSSCKSPLLEIVERQLQMDVIRKIEIDNGDELTADFLYDEVH 155 (164)
T ss_dssp EEEEEEEEECCSTTSCHHHHHHHHHTHHHHHHHHHHHHCCCEEEEEEESSSSSCCHHHHHHHHS
T ss_pred cccEEEEEEcCCCCCCHHHHHHHHHhHHHHHHHHhhccCCceeEEEEeCChHHcCHHHHHhHhC
Confidence 788999999999 9999999999999999999998 77 8999999999999999999974
No 19
>3q2b_A Pfadf1, cofilin/actin-depolymerizing factor homolog 1; actin regulator, actin-binding protein; HET: TAR; 1.60A {Plasmodium falciparum} PDB: 2xf1_A
Probab=100.00 E-value=5.1e-40 Score=227.92 Aligned_cols=118 Identities=27% Similarity=0.511 Sum_probs=106.7
Q ss_pred cccccCceeCHHHHHHHHHhhccCceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCC---ceEEEEeeeeeecC
Q 032333 6 KMATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDD---CRYAVFDFDFVTVD 82 (143)
Q Consensus 6 ~m~~sGi~is~e~~~a~~~lk~~~~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~---pry~~y~~~~~~~~ 82 (143)
++++|||.+++||.++|++||.++++|||+|+|+++ +|+|+++++ ..+|++|.+.||+++ |||++||+
T Consensus 1 ~~m~SGi~vs~e~~~~f~~lk~~k~~~~ii~kI~~~--~ivv~~~~~-~~~~~~f~~~Lp~~~~~~prY~vy~~------ 71 (124)
T 3q2b_A 1 GSMISGIRVNDNCVTEFNNMKIRKTCGWIIFVIQNC--EIIIHSKGA-STTLTELVQSIDKNNEIQCAYVVFDA------ 71 (124)
T ss_dssp ---CCSCEECHHHHHHHHHHHHHTSSEEEEEEEETT--EEEEEEEEE-CSCHHHHHHHHHHCTTCSEEEEEEEC------
T ss_pred CCCCCCCccCHHHHHHHHHHhcCCCcEEEEEEEcCC--EEEEeccCC-CCCHHHHHHHccccCCCCcEEEEEec------
Confidence 457899999999999999999987799999999974 898988876 478999999999999 99999997
Q ss_pred CceeeeEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCee-EEEEeCCCCCCCH
Q 032333 83 NCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIH-YEVQATDPTEMGF 135 (143)
Q Consensus 83 ~~~~~k~vfI~w~P~~a~vk~KMlyassk~~l~~~l~gi~-~~i~~~d~~dl~~ 135 (143)
+++|+||+|||++|++|+||+|||+|++|++.|+|++ .+++++|++||++
T Consensus 72 ---~~k~vfI~w~Pd~a~vk~KMlYASsk~~l~~~l~g~~~~~i~a~d~~dlt~ 122 (124)
T 3q2b_A 72 ---VSKIHFFMYARESSNSRDRMTYASSKQAILKKIEGVNVLTSVIESAQDVAD 122 (124)
T ss_dssp ---SSCEEEEEEECTTSCHHHHHHHHHHHHHHHTTSTTSEECCSCBCSHHHHTT
T ss_pred ---CCCEEEEEECCCCCChhHhhhhHHHHHHHHHHhCCCceEEEEecCHHHccc
Confidence 3699999999999999999999999999999999998 5899999999874
No 20
>2l72_A Tgadf, actin depolymerizing factor, putative; ADF/cofilin, actin binding, protein binding; NMR {Toxoplasma gondii}
Probab=100.00 E-value=1.5e-38 Score=224.43 Aligned_cols=116 Identities=34% Similarity=0.678 Sum_probs=107.2
Q ss_pred cccCceeCHHHHHHHHHhhccCceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeeecCCceee
Q 032333 8 ATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRKS 87 (143)
Q Consensus 8 ~~sGi~is~e~~~a~~~lk~~~~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~~~~~~~~ 87 (143)
++|||++++||+++|++|+.++++|||+|+|+. ++|+++++++ + +|++|.+.||+++|||++|| +| +
T Consensus 22 m~sGi~vs~e~~~af~~lk~~k~~~~ii~~I~~--~eivv~~~g~-~-~~~el~~~Lp~~~prY~~y~------dg---~ 88 (139)
T 2l72_A 22 MASGMGVDENCVARFNELKIRKTVKWIVFKIEN--TKIVVEKDGK-G-NADEFRGALPANDCRFGVYD------CG---N 88 (139)
T ss_dssp CCTTCEECHHHHHHHHHHTTTTCCCEEEEEEET--TEEEEEEEES-S-HHHHHHHHCCCCSCCEEEEE------CS---S
T ss_pred ccCCCCcCHHHHHHHHHHhCCCCeeEEEEEEcC--CEEEEeecCC-C-CHHHHHHhCCCCCcEEEEEc------CC---C
Confidence 589999999999999999998779999999998 5788988887 4 89999999999999999999 23 7
Q ss_pred eEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeEE-EEeCCCCCCCHH
Q 032333 88 KIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYE-VQATDPTEMGFD 136 (143)
Q Consensus 88 k~vfI~w~P~~a~vk~KMlyassk~~l~~~l~gi~~~-i~~~d~~dl~~~ 136 (143)
||+||+|||++|++|+||+|||+|++|++.|+|++.. +++++++||+++
T Consensus 89 k~vFI~w~Pd~a~vk~KMlYASsk~~lk~~l~g~~v~~iea~~~~DLte~ 138 (139)
T 2l72_A 89 KIQFVLWCPDNAPVKPRMTYASSKDALLKKLDGATAVALEAHEMGDLAPL 138 (139)
T ss_dssp CEEEEEECCTTSCHHHHHHHHHHHHHHHHHHCSCCSCEEEESSTTTTSCC
T ss_pred cEEEEEECCCCCChhHeeehHhhHHHHHHHhCCceEEEEEeCCHHHCccC
Confidence 9999999999999999999999999999999998765 999999999875
No 21
>1x67_A Drebrin-like protein; cell-free protein synthesis, actin-binding protein, SH3P7, MABP1, T-cell lymphocyte signaling and regulation; NMR {Homo sapiens}
Probab=100.00 E-value=7.1e-38 Score=222.59 Aligned_cols=131 Identities=18% Similarity=0.301 Sum_probs=120.0
Q ss_pred ccccCceeC-----HHHHHHHHHhhccC-ceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeee
Q 032333 7 MATTGMWVA-----DECKNSFMEMKWKK-VHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVT 80 (143)
Q Consensus 7 m~~sGi~is-----~e~~~a~~~lk~~~-~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~ 80 (143)
.++||+.++ ++|+++|++++.++ .+||++|+|++++++|+|+.+|+ .+|+||.+.|++++|||++||++.
T Consensus 3 ~~~~~m~~~l~~~~~e~~~a~~~v~~~~~~~~wi~~~i~~~~~~l~v~~~G~--~~~~e~~~~L~~~~~~Y~~~r~~~-- 78 (146)
T 1x67_A 3 SGSSGMAANLSRNGPALQEAYVRVVTEKSPTDWALFTYEGNSNDIRVAGTGE--GGLEEMVEELNSGKVMYAFCRVKD-- 78 (146)
T ss_dssp SSSSSSCCCCCTTHHHHHHHHHHHHCSSSSCSEEEEEESSSSSCEEEEEEES--SCHHHHHHHCCTTSEEEEEEEEEC--
T ss_pred CcccceEEEcCCCCHHHHHHHHHHHcCCCCccEEEEEEeCCCcEEEEEeccC--CCHHHHHhhCCCCceEEEEEEEEc--
Confidence 356676665 99999999999986 59999999988777899998886 589999999999999999999973
Q ss_pred cCCceeeeEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCCCCCCHHHHHhhh
Q 032333 81 VDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRA 142 (143)
Q Consensus 81 ~~~~~~~k~vfI~w~P~~a~vk~KMlyassk~~l~~~l~gi~~~i~~~d~~dl~~~~i~~k~ 142 (143)
+++.++||+||.||||++|+++||+||+++++|++.|+|+|.+||+++++||+++.|.+|+
T Consensus 79 -~~~~~~K~vfI~W~pd~a~v~~Km~yas~k~~lk~~l~g~~~ei~at~~~el~~~~i~~k~ 139 (146)
T 1x67_A 79 -PNSGLPKFVLINWTGEGVNDVRKGACASHVSTMASFLKGAHVTINARAEEDVEPECIMEKV 139 (146)
T ss_dssp -SSSCSEEEEEEEEECTTSCHHHHHHHHHHHHHHHHHTTTEEEEECCCSGGGGCHHHHHHHH
T ss_pred -CCCCeeeEEEEEECCCCCChhheeeehhhHHHHHHhcCCcEEEEEeCChHHCCHHHHHHHH
Confidence 4578999999999999999999999999999999999999999999999999999999987
No 22
>1t3y_A Coactosin-like protein; beta sheet, protein binding; 1.15A {Homo sapiens} SCOP: d.109.1.2 PDB: 1t2l_A 1t3x_A 1vfq_A 1tmw_A 1wnj_A 1udm_A 1wm4_A
Probab=100.00 E-value=2.5e-34 Score=203.27 Aligned_cols=122 Identities=18% Similarity=0.283 Sum_probs=113.6
Q ss_pred CHHHHHHHHHhhccC-ceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeeecCCceeeeEEEEE
Q 032333 15 ADECKNSFMEMKWKK-VHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIA 93 (143)
Q Consensus 15 s~e~~~a~~~lk~~~-~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~~~~~~~~k~vfI~ 93 (143)
+++|.++|++++.++ .++|++|+++++ +|+|+.+|+ +|+||.+.||+++|||++||+. ..++++.++|++||.
T Consensus 6 ~~~~~~a~~~v~~~~~~~~wilf~~~~~--~i~v~~~G~---g~~e~~~~L~~~~~~Ya~~r~~-~~~~~~~~~K~vfI~ 79 (141)
T 1t3y_A 6 KEACRAAYNLVRDDGSAVIWVTFKYDGS--TIVPGEQGA---EYQHFIQQCTDDVRLFAFVRFT-TGDAMSKRSKFALIT 79 (141)
T ss_dssp HHHHHHHHHHHHCTTSSCCEEEEEEETT--EEEEEEEES---SHHHHHHHCCTTCEEEEEEEEE-ECSGGGCEEEEEEEE
T ss_pred hHHHHHHHHHHHcCCCCceEEEEEEcCC--EEEEEecCC---CHHHHHhhCCCCceEEEEEEEE-ecCCCCceeeEEEEE
Confidence 689999999999976 599999999884 599999887 4999999999999999999996 455678999999999
Q ss_pred EcCCCCCcchhhhhhhhHHHHHHhcCCeeEEEEeCCCCCCCHHHHHhhh
Q 032333 94 WAPTASRIRAKMLYATSKDGLRRVLDGIHYEVQATDPTEMGFDVIMDRA 142 (143)
Q Consensus 94 w~P~~a~vk~KMlyassk~~l~~~l~gi~~~i~~~d~~dl~~~~i~~k~ 142 (143)
|||++++++.||+||++++.|++.|.|++.+||++|++||+++.|.+|+
T Consensus 80 W~pd~~~~~~K~~~as~k~~vk~~l~g~~~~i~a~d~~el~~~~I~~kv 128 (141)
T 1t3y_A 80 WIGENVSGLQRAKTGTDKTLVKEVVQNFAKEFVISDRKELEEDFIKSEL 128 (141)
T ss_dssp EECTTSCHHHHHHHHHHHHHHTTTSCCCSEEEEECSGGGGSHHHHHHHH
T ss_pred ECCCCCCHHHhhhHHHHHHHHHHHhcccEEEEEeCChHHCCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999987
No 23
>2ff3_A Gelsolin; protein-protein complex, structural protein/contractIle protein complex; HET: ATP; 2.00A {Homo sapiens} SCOP: d.109.1.1 PDB: 2ff6_G*
Probab=77.06 E-value=15 Score=25.25 Aligned_cols=85 Identities=13% Similarity=0.125 Sum_probs=52.6
Q ss_pred HHHHHhhccCceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeeecCCceeeeEEEEEEcCCCC
Q 032333 20 NSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTAS 99 (143)
Q Consensus 20 ~a~~~lk~~~~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~~~~~~~~k~vfI~w~P~~a 99 (143)
.+|+..-. ....-|.+|++. +.+.+.+.. + ..|-.. -||++.. .|... +.+..+++-+|+...+
T Consensus 28 ~~f~~~g~--~~gl~VWrIe~~-~~v~vp~~~-----~----G~Fysg-D~YIVl~-ty~~~--~g~~~~~IyfW~G~~s 91 (150)
T 2ff3_A 28 PEFLKAGK--EPGLQIWRVEKF-DLVPVPTNL-----Y----GDFFTG-DAYVILK-TVQLR--NGNLQYDLHYWLGNEC 91 (150)
T ss_dssp HHHHHTTS--SSEEEEEEEETT-EEEECCGGG-----T----TEEETT-SEEEEEE-EEECT--TSSEEEEEEEEECTTC
T ss_pred hhhhccCC--CCCeEEEEEeCC-EEEECChHH-----c----CeecCC-CeEEEEE-EEecC--CCceEEEEEEEeCCCC
Confidence 35665533 356778999864 333332221 1 122333 4576543 22222 2345788999999999
Q ss_pred CcchhhhhhhhHHHHHHhcCC
Q 032333 100 RIRAKMLYATSKDGLRRVLDG 120 (143)
Q Consensus 100 ~vk~KMlyassk~~l~~~l~g 120 (143)
+..++..-|.--..|-+.|+|
T Consensus 92 s~de~gaAA~~aveLd~~lgg 112 (150)
T 2ff3_A 92 SQDESGAAAIFTVQLDDYLNG 112 (150)
T ss_dssp CHHHHHHHHHHHHHHHHHTTT
T ss_pred CchhHHHHHHHHHHHHHHcCC
Confidence 999998877777788888887
No 24
>3cip_G Gelsolin; actin, dictyostelium discoideum, actin-associated methyl histidine, ATP-binding, cytoskeleton, nucleotide-BIN phosphoprotein; HET: HIC ATP; 1.60A {Homo sapiens} SCOP: d.109.1.1 PDB: 3ci5_G* 1p8z_G* 1d4x_G* 1nlv_G* 1mdu_A* 1nm1_G* 1nmd_G* 1yag_G* 1yvn_G* 3cjb_G* 3cjc_G* 1esv_S* 1eqy_S* 1c0g_S* 1c0f_S* 1dej_S* 3a5l_S* 3a5m_S* 3a5n_S* 3a5o_S*
Probab=76.12 E-value=15 Score=24.52 Aligned_cols=95 Identities=15% Similarity=0.134 Sum_probs=57.0
Q ss_pred HHHHHhhccCceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeeecCCceeeeEEEEEEcCCCC
Q 032333 20 NSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTAS 99 (143)
Q Consensus 20 ~a~~~lk~~~~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~~~~~~~~k~vfI~w~P~~a 99 (143)
.+|+..-. ....-|.+|++. +.+.+.+.. + ..|-.. -||++.. .+... +.+....+-+|+...+
T Consensus 9 ~~~~~~g~--~~gl~vWrIe~~-~~~~vp~~~-----~----G~Fy~g-d~YIvl~-ty~~~--~g~~~~~i~~W~G~~s 72 (128)
T 3cip_G 9 PEFLKAGK--EPGLQIWRVEKF-DLVPVPTNL-----Y----GDFFTG-DAYVILK-TVQLR--NGNLQYDLHYWLGNEC 72 (128)
T ss_dssp HHHHHTTS--SSEEEEEEEETT-EEEECCGGG-----T----TEEETT-CEEEEEE-EEECT--TSCEEEEEEEEECTTC
T ss_pred hhHHhcCC--CCCeEEEEEeCC-EEEECChHH-----c----CeecCC-CeEEEEE-EEecC--CCceEEEEEEEcCCCC
Confidence 35665433 356678999864 333332221 1 122333 4566543 22222 2345788999999999
Q ss_pred CcchhhhhhhhHHHHHHhcCCee---EEEEeCCC
Q 032333 100 RIRAKMLYATSKDGLRRVLDGIH---YEVQATDP 130 (143)
Q Consensus 100 ~vk~KMlyassk~~l~~~l~gi~---~~i~~~d~ 130 (143)
+..++..-|.--..|-+.|+|-. .+.|..++
T Consensus 73 s~de~g~Aa~~aveLd~~lgg~~vq~R~~QG~E~ 106 (128)
T 3cip_G 73 SQDESGAAAIFTVQLDDYLNGRAVQHREVQGFES 106 (128)
T ss_dssp CHHHHHHHHHHHHHHHHHTTTCEEEEEEETTCCC
T ss_pred CcchHHHHHHHHHHHHHHcCCCceEEEeECCCCC
Confidence 99999888887788888888732 34444443
No 25
>1t44_G Chimera of gelsolin domain 1 and C-terminal domain of thymosin beta-4; structural protein; HET: ATP; 2.00A {Homo sapiens} SCOP: d.109.1.1
Probab=75.36 E-value=17 Score=24.84 Aligned_cols=85 Identities=13% Similarity=0.125 Sum_probs=52.6
Q ss_pred HHHHHhhccCceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeeecCCceeeeEEEEEEcCCCC
Q 032333 20 NSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTAS 99 (143)
Q Consensus 20 ~a~~~lk~~~~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~~~~~~~~k~vfI~w~P~~a 99 (143)
.+|+..-. ....-|.+|++. +.+.+.... + ..|-.. -||++.. .+... +.+...++-+|++..+
T Consensus 6 ~~f~~~g~--~~gl~VWrIe~~-~~~~vp~~~-----~----G~Fy~g-d~YIvl~-ty~~~--~g~~~~~i~~W~G~~s 69 (147)
T 1t44_G 6 PEFLKAGK--EPGLQIWRVEKF-DLVPVPTNL-----Y----GDFFTG-DAYVILK-TVQLR--NGNLQYDLHYWLGNEC 69 (147)
T ss_dssp HHHHHTTS--SSEEEEEEEETT-EEEECCGGG-----T----TEEETT-CEEEEEE-EEECT--TSCEEEEEEEEECTTC
T ss_pred hhhhccCC--CCCeEEEEEeCC-EEEECChHH-----c----CeecCC-CeEEEEE-EEecC--CCceEEEEEEEeCCCC
Confidence 35655433 356778999864 333332221 1 122333 4565543 22222 2345788999999999
Q ss_pred CcchhhhhhhhHHHHHHhcCC
Q 032333 100 RIRAKMLYATSKDGLRRVLDG 120 (143)
Q Consensus 100 ~vk~KMlyassk~~l~~~l~g 120 (143)
+..++..-|.--..|...|+|
T Consensus 70 s~de~g~Aa~~aveLd~~lgg 90 (147)
T 1t44_G 70 SQDESGAAAIFTVQLDDYLNG 90 (147)
T ss_dssp CHHHHHHHHHHHHHHHHHTTT
T ss_pred ChhHHHHHHHHHHHHHHHcCC
Confidence 999998877777788888887
No 26
>3tu5_B Gelsolin, protein cordon-BLeu, thymosin beta-4; unusual hairpin conformation in the D-loop, structural prote binding protein complex; HET: ATP; 3.00A {Homo sapiens}
Probab=65.63 E-value=9.2 Score=29.33 Aligned_cols=94 Identities=15% Similarity=0.166 Sum_probs=55.4
Q ss_pred HHHHHhhccCceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeeecCCceeeeEEEEEEcCCCC
Q 032333 20 NSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTAS 99 (143)
Q Consensus 20 ~a~~~lk~~~~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~~~~~~~~k~vfI~w~P~~a 99 (143)
.+|+..-. ..=.-|.+|++- +.+.|.+.. | ..|-.. -||+|+.- |.... .+..+.+-+|++..+
T Consensus 24 ~~~~~~g~--~~Gl~iWrIe~~-~~~~v~~~~-----~----G~Fy~g-d~Yivl~t-~~~~~--g~~~~~i~~W~G~~s 87 (297)
T 3tu5_B 24 PEFLKAGK--EPGLQIWRVEKF-DLVPVPTNL-----Y----GDFFTG-DAYVILKT-VQLRN--GNLQYDLHYWLGNEC 87 (297)
T ss_dssp HHHHHTTS--SSEEEEEEEETT-EEEECCGGG-----T----TEEETT-CEEEEEEE-EECTT--SCEEEEEEEEECTTC
T ss_pred hhHhccCC--CCceEEEEEcCC-EEEECCHHH-----c----CeecCC-CeEEEeEe-EECCC--CceeEEEEEEeCCCC
Confidence 45555432 233558888863 333332221 1 112233 45776642 22222 345678889999999
Q ss_pred CcchhhhhhhhHHHHHHhcCC--ee-EEEEeCC
Q 032333 100 RIRAKMLYATSKDGLRRVLDG--IH-YEVQATD 129 (143)
Q Consensus 100 ~vk~KMlyassk~~l~~~l~g--i~-~~i~~~d 129 (143)
+.-++..-|.--..|...|+| ++ .++|...
T Consensus 88 s~de~g~aa~~av~Ld~~lgg~~vq~Re~Qg~E 120 (297)
T 3tu5_B 88 SQDESGAAAIFTVQLDDYLNGRAVQHREVQGFE 120 (297)
T ss_dssp CHHHHHHHHHHHHHHHHHTTTCCEEEEEETTCC
T ss_pred ChhHHHHHHHHHHHHHHHcCCCceEEEEeCCcC
Confidence 999998888777888888987 32 3555444
No 27
>2k5j_A Uncharacterized protein YIIF; structure, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Shigella flexneri 5 str}
Probab=43.32 E-value=15 Score=22.24 Aligned_cols=27 Identities=7% Similarity=0.053 Sum_probs=22.1
Q ss_pred Ccccccc--cccCceeCHHHHHHHHHhhc
Q 032333 1 MAMAFKM--ATTGMWVADECKNSFMEMKW 27 (143)
Q Consensus 1 ~~~~~~m--~~sGi~is~e~~~a~~~lk~ 27 (143)
|+|..+| ...+|.+++++.+.++.+..
T Consensus 1 ~~~~~~m~m~risI~Lpdel~~~Ld~la~ 29 (80)
T 2k5j_A 1 MNSLAGIDMGRILLDLSNEVIKQLDDLEV 29 (80)
T ss_dssp CCCCSSTTCCEEEEEECHHHHHHHHHHHH
T ss_pred CCccccceeEEEEEECCHHHHHHHHHHHH
Confidence 6777775 55788899999999999865
No 28
>2vik_A Villin 14T; actin-binding protein, capping protein, calcium-binding protein, cytoskeletal protein; NMR {Gallus gallus} SCOP: d.109.1.1 PDB: 2vil_A
Probab=36.55 E-value=89 Score=20.48 Aligned_cols=90 Identities=17% Similarity=0.205 Sum_probs=53.7
Q ss_pred hhccCceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeeecCCceeeeEEEEEEcCCCCCcchh
Q 032333 25 MKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAK 104 (143)
Q Consensus 25 lk~~~~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~~~~~~~~k~vfI~w~P~~a~vk~K 104 (143)
|..+.....-|.+|++. +.+.+.+.. + ..|-..+ ||++.. .+. .. .+...++-+|++..++..++
T Consensus 10 ~~d~~~~~l~vWrIe~~-~~~~vp~~~-----~----G~Fy~gd-~YIvl~-t~~-~~--g~~~~~i~~W~G~~ss~de~ 74 (126)
T 2vik_A 10 KLDKTTPGIQIWRIENM-EMVPVPTKS-----Y----GNFYEGD-CYVLLS-TRK-TG--SGFSYNIHYWLGKNSSQDEQ 74 (126)
T ss_dssp SSCSSCCEEEEEECGGG-SCCEECTTT-----T----TCCCSSS-CEEEEE-EEE-CS--SSEEEEEEEEECTTSCHHHH
T ss_pred CcCcCCCCEEEEEEeCC-EEEECChhh-----c----CeeCCCC-eEEEEE-ecc-CC--CceeEEEEEEeCCCCCchhH
Confidence 33333456667787753 233332211 1 1233444 466654 232 22 24578899999999999999
Q ss_pred hhhhhhHHHHHHhcCCe---eEEEEeCC
Q 032333 105 MLYATSKDGLRRVLDGI---HYEVQATD 129 (143)
Q Consensus 105 Mlyassk~~l~~~l~gi---~~~i~~~d 129 (143)
..-|.--..|-+.|+|- ..+.|..+
T Consensus 75 g~Aa~~aveLd~~lgg~~vq~R~~QG~E 102 (126)
T 2vik_A 75 GAAAIYTTQMDEYLGSVAVQHREVQGHE 102 (126)
T ss_dssp HHHHHHHHHHHHHTTSCSCEEEEETTTS
T ss_pred HHHHHHHHHHHHHcCCCccEEEEECCCC
Confidence 88877778888888872 34555444
No 29
>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1
Probab=34.32 E-value=89 Score=19.81 Aligned_cols=52 Identities=12% Similarity=0.231 Sum_probs=38.1
Q ss_pred HHHHHHHHhhccCceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCc
Q 032333 17 ECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDC 69 (143)
Q Consensus 17 e~~~a~~~lk~~~~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~p 69 (143)
++..++.++..-...+-.+..++.+.+.+.+.-.|+ +.+|+++.+.+..-.+
T Consensus 23 d~A~~l~~~~gV~gVnItv~EvD~eTe~lkitiEG~-~id~d~I~~~IE~~Gg 74 (97)
T 2raq_A 23 EYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGN-DLDFDEITRAIESYGG 74 (97)
T ss_dssp HHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECS-SCCHHHHHHHHHHTTC
T ss_pred HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEec-CCCHHHHHHHHHHcCC
Confidence 455566666555568888999999888888877776 6789998887655444
No 30
>1j72_A Macrophage capping protein; actin, human, CAP G, GCAP39, MBHL, GELS structural protein; 2.50A {Homo sapiens} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 PDB: 1jhw_A
Probab=34.02 E-value=1.1e+02 Score=23.35 Aligned_cols=82 Identities=20% Similarity=0.188 Sum_probs=48.5
Q ss_pred ceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeeecCCceeeeEEEEEEcCCCCCcchhhhhhh
Q 032333 30 VHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYAT 109 (143)
Q Consensus 30 ~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~pry~~y~~~~~~~~~~~~~k~vfI~w~P~~a~vk~KMlyas 109 (143)
....-|.+|++. +.+.+.+.. + ..|-.. -||++.. .| ... ...+-+|++..++.-++..-|-
T Consensus 18 ~~g~~iWrie~~-~~~~vp~~~-----~----G~Fy~g-d~Yivl~-t~--~~~----~~~i~~W~G~~ss~de~~~aa~ 79 (347)
T 1j72_A 18 DPGLHVWRVEKL-KPVPVAQEN-----Q----GVFFSG-DSYLVLH-NG--PEE----VSHLHLWIGQQSSRDEQGACAV 79 (347)
T ss_dssp SSEEEEEEECSS-SEEECCTTT-----T----TEEETT-SEEEEEE-EC--SSS----CEEEEEEECTTSCHHHHHHHHH
T ss_pred CCCeEEEEEcCC-EEEECCHHH-----c----CeecCC-CEEEEEE-ee--cCC----CeEEEEEcCCCCCHHHHHHHHH
Confidence 356668898863 333332211 1 122333 4576643 12 111 2778899999999999877776
Q ss_pred hHHHHHHhcCCe---eEEEEeCC
Q 032333 110 SKDGLRRVLDGI---HYEVQATD 129 (143)
Q Consensus 110 sk~~l~~~l~gi---~~~i~~~d 129 (143)
--..|...|+|- ..+.|..+
T Consensus 80 ~t~~ld~~lgg~~vq~R~~Qg~E 102 (347)
T 1j72_A 80 LAVQLDDYLGGRPVQHREVQGNE 102 (347)
T ss_dssp HHHHHHHHTTTCSEEEEEETTSC
T ss_pred HHHHHHHHhCCCCcEEEeeCCCC
Confidence 667788888772 23445443
No 31
>2ygw_A Malonyl-COA decarboxylase, mitochondrial; lyase; 2.80A {Homo sapiens}
Probab=30.71 E-value=23 Score=28.82 Aligned_cols=34 Identities=6% Similarity=0.020 Sum_probs=26.8
Q ss_pred CChHHHhhcCCCCCceEEEEeeeeeecCCceeeeEEEEEE
Q 032333 55 EGYEDLAASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAW 94 (143)
Q Consensus 55 ~~~~e~~~~l~~~~pry~~y~~~~~~~~~~~~~k~vfI~w 94 (143)
.+|+|+..-|.++..||++|.... + ..++|||.-
T Consensus 192 ~~W~DLkrRL~pdRRCfaFFHp~m--P----~EPLIfVeV 225 (460)
T 2ygw_A 192 KNWMDMKRRVGPYRRCYFFSHCST--P----GEPLVVLHV 225 (460)
T ss_dssp CSHHHHHHHTSTTEEEEEEEETTB--T----TCCSEEEEE
T ss_pred CCHHHHHHhcCCCCeEEEecCCCC--C----CCCeEEEee
Confidence 589999999988999999997653 2 346777764
No 32
>3vbh_A EV71, genome polyprotein, capsid protein VP1; hand-foot-and-mouth disease, enterovirus uncoating, P factor, adaptor-sensor; HET: SPH; 2.30A {Human enterovirus 71} PDB: 3vbf_A* 3vbo_A 3vbs_A* 4aed_A* 3vbr_A 3vbu_A
Probab=27.32 E-value=80 Score=24.12 Aligned_cols=16 Identities=6% Similarity=0.204 Sum_probs=12.7
Q ss_pred EEEEEEcCCCCCcchh
Q 032333 89 IFFIAWAPTASRIRAK 104 (143)
Q Consensus 89 ~vfI~w~P~~a~vk~K 104 (143)
.+-|+|+|.+||+..+
T Consensus 150 ~~QvmyvPpGaP~p~~ 165 (297)
T 3vbh_A 150 LLQYMFVPPGAPKPDS 165 (297)
T ss_dssp EEEEEEECTTSCCCCS
T ss_pred EEEEEEcCCCCCCCCc
Confidence 4569999999997643
No 33
>1ncq_A Coat protein VP1; HRV, pleconaril, icosahedral virus; HET: W11; 2.50A {Human rhinovirus 14} SCOP: b.121.4.1 PDB: 1d3i_1* 1hrv_1* 1hri_1* 1na1_A* 1k5m_A* 1r08_1* 1r09_1* 1rvf_1 1vrh_1* 2hwb_1* 2hwc_1* 2r04_1* 2r06_1* 2r07_1* 2rm2_1* 2rr1_1* 2rs1_1* 2rs3_1* 2rs5_1* 4rhv_1 ...
Probab=26.79 E-value=82 Score=23.88 Aligned_cols=16 Identities=6% Similarity=0.185 Sum_probs=12.7
Q ss_pred EEEEEEcCCCCCcchh
Q 032333 89 IFFIAWAPTASRIRAK 104 (143)
Q Consensus 89 ~vfI~w~P~~a~vk~K 104 (143)
.+-|+|+|.+||+..+
T Consensus 147 ~~qvmyvPpGaP~p~~ 162 (289)
T 1ncq_A 147 VVQAMYVPPGAPNPKE 162 (289)
T ss_dssp EEEEEEECTTSCCCCS
T ss_pred EEEEEEeCCCCCCCcc
Confidence 4459999999998753
No 34
>1fmd_1 Foot-and-mouth disease virus (subunit VP1); icosahedral virus; 3.50A {Foot-and-mouth disease virus} SCOP: b.121.4.1 PDB: 1qgc_1 1qgc_5
Probab=25.85 E-value=66 Score=23.29 Aligned_cols=29 Identities=17% Similarity=0.424 Sum_probs=19.7
Q ss_pred ceEEEEeeeeeecCCceeeeEEEEEEcCCCCCcch
Q 032333 69 CRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRA 103 (143)
Q Consensus 69 pry~~y~~~~~~~~~~~~~k~vfI~w~P~~a~vk~ 103 (143)
.-|..+|++..-.. -.-|+|+|.+||+..
T Consensus 69 FTY~rfDlEvtvv~------~~qvmyvPpGaP~p~ 97 (208)
T 1fmd_1 69 ATYYFSDLEIAVTH------TGKLTWVPNGAPVSA 97 (208)
T ss_dssp EEEEEEEEEEEEEE------EEEEEEECTTCCGGG
T ss_pred cEEEeccEEEEEEE------eeEEEEECCCCCchh
Confidence 35666666654221 158999999999885
No 35
>2fh1_A Gelsolin; calcium, contractIle protein; 1.55A {Homo sapiens} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 PDB: 1p8x_A 2fh2_A 2fh3_A 2fh4_A 1h1v_G* 1nph_A
Probab=25.67 E-value=2.1e+02 Score=21.70 Aligned_cols=73 Identities=16% Similarity=0.300 Sum_probs=45.0
Q ss_pred eEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCceEEE-EeeeeeecCCceeeeEEEEEEcCCCCCcchhhhhhhh
Q 032333 32 RYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDCRYAV-FDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATS 110 (143)
Q Consensus 32 ~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~pry~~-y~~~~~~~~~~~~~k~vfI~w~P~~a~vk~KMlyass 110 (143)
..-|++|.+. +.+.+.+. ....|-..+ ||++ |.+. . .+ +....+-+|++..|+..++..-|.-
T Consensus 8 ~~~vwrIe~~-~~~~v~~~---------~~G~Fy~gD-~YIvl~ty~--~-~~--~~~~~i~~W~G~~ss~de~~~aa~~ 71 (344)
T 2fh1_A 8 QKQIWRIEGS-NKVPVDPA---------TYGQFYGGD-SYIILYNYR--H-GG--RQGQIIYNWQGAQSTQDEVAASAIL 71 (344)
T ss_dssp EEEEEEEETT-EEEECCGG---------GTTEEETTS-EEEEEEEEE--E-TT--EEEEEEEEEECTTCCHHHHHHHHHH
T ss_pred CEEEEEEcCC-eEEECCHH---------HcCeecCCC-eEEEEEEee--c-CC--CceEEEEEEecCCCCHhHHHHHHHH
Confidence 4457788864 33333211 112344444 4655 4443 2 22 3567889999999999998776666
Q ss_pred HHHHHHhcCC
Q 032333 111 KDGLRRVLDG 120 (143)
Q Consensus 111 k~~l~~~l~g 120 (143)
-..|...++|
T Consensus 72 ~~~ld~~lgg 81 (344)
T 2fh1_A 72 TAQLDEELGG 81 (344)
T ss_dssp HHHHHHHTTS
T ss_pred HHHHHHHhCC
Confidence 6677788876
No 36
>1tme_1 Theiler'S murine encephalomyelitis virus (subunit VP1); icosahedral virus; 2.80A {Theiler} SCOP: b.121.4.1 PDB: 1tmf_1
Probab=25.54 E-value=79 Score=23.86 Aligned_cols=33 Identities=18% Similarity=0.317 Sum_probs=19.8
Q ss_pred eEEEEeeeeeecCCceeeeEEEEEEcCCCCCcc
Q 032333 70 RYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIR 102 (143)
Q Consensus 70 ry~~y~~~~~~~~~~~~~k~vfI~w~P~~a~vk 102 (143)
-|.-+|++.+-......+-.+-|+|+|.+|++.
T Consensus 121 TY~rfDLEvTvv~~~~~~~~~qvmyvPpGaP~p 153 (274)
T 1tme_1 121 TYYKCDLEVTVSALGTDTVASVLRWAPTGAPAD 153 (274)
T ss_dssp EEEEEEEEEEEEECSCSCCEEEEEEECTTCCCC
T ss_pred eEecccEEEEEEEcCCCCceEEEEEcCCCCCCC
Confidence 566666665422211111235699999999987
No 37
>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}
Probab=25.34 E-value=98 Score=19.58 Aligned_cols=52 Identities=12% Similarity=0.200 Sum_probs=36.2
Q ss_pred HHHHHHHHhhccCceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCc
Q 032333 17 ECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDC 69 (143)
Q Consensus 17 e~~~a~~~lk~~~~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~p 69 (143)
++..++.++..-...+-.+..++.+.+.+.+.-.|+ +.+|+++.+.+..-.+
T Consensus 22 d~A~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~-~idfd~I~~~IE~~Gg 73 (96)
T 2x3d_A 22 DLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGT-SLNFDDIRKMLEEEGC 73 (96)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEES-SCCHHHHHHHHHHTTC
T ss_pred HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEec-CCCHHHHHHHHHHcCC
Confidence 444555555443457878888998888888777776 5789998887755444
No 38
>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1
Probab=23.38 E-value=55 Score=20.89 Aligned_cols=52 Identities=13% Similarity=0.171 Sum_probs=36.1
Q ss_pred HHHHHHHHhhccCceeEEEEEEeCCCcEEEEeecCCCCCChHHHhhcCCCCCc
Q 032333 17 ECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDLAASLPDDDC 69 (143)
Q Consensus 17 e~~~a~~~lk~~~~~~~ii~~i~~~~~~i~l~~~~~~~~~~~e~~~~l~~~~p 69 (143)
++..++.++..-...+-.+..+|.+.+.+.+.-.|+ +.+|+++.+.+..-.+
T Consensus 23 dlA~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~-dIdfd~I~~~IE~~Gg 74 (100)
T 3bpd_A 23 VFALKLSELENVDGVNIHLSEIDQATENIKITILGN-NLDYEQIKGVIEDMGG 74 (100)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEE-EECHHHHHHHHHTTTC
T ss_pred HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEec-CCCHHHHHHHHHHcCC
Confidence 444555555444457888888998887787776675 5689998887765444
No 39
>2mev_1 Mengo virus coat protein (subunit VP1); cardio picornavirus coat protein, icosahedral virus; 3.00A {Mengo virus} SCOP: b.121.4.1 PDB: 1mec_1
Probab=22.88 E-value=77 Score=23.95 Aligned_cols=33 Identities=15% Similarity=0.392 Sum_probs=19.0
Q ss_pred eEEEEeeeeeecCCceeeeEEEEEEcCCCCCcc
Q 032333 70 RYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIR 102 (143)
Q Consensus 70 ry~~y~~~~~~~~~~~~~k~vfI~w~P~~a~vk 102 (143)
-|.-+|++.+-.......--.-|+|+|.+|++.
T Consensus 121 TY~rfDLEvtvv~~~~~~~~~~vmyvPpGaP~~ 153 (277)
T 2mev_1 121 VYYKCDLEVTLSPHTSGAHGLLVRWCPTGTPTK 153 (277)
T ss_dssp SEEEEEEEEEEEESCSSCCCEEEEEECTTSCCC
T ss_pred eEecccEEEEEEEcCCCCcceEEEECCCCCCCC
Confidence 566677766422111001112499999999986
No 40
>1d0n_A Horse plasma gelsolin; mixed alpha-beta structure, actin-binding protein, protein D packing, contractIle protein; 2.50A {Equus caballus} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 PDB: 2fgh_A* 3ffn_A 3ffk_A* 1rgi_G*
Probab=22.51 E-value=2.3e+02 Score=24.12 Aligned_cols=61 Identities=16% Similarity=0.101 Sum_probs=0.0
Q ss_pred CCceEEEEeeeeeecCCceeeeEEEEEEcCCCCCcchhhhhhhhHHHHHHhcCC---eeEEEEeCCC
Q 032333 67 DDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDG---IHYEVQATDP 130 (143)
Q Consensus 67 ~~pry~~y~~~~~~~~~~~~~k~vfI~w~P~~a~vk~KMlyassk~~l~~~l~g---i~~~i~~~d~ 130 (143)
+.-||+|.. +....+.+..+..-+|++..++.-++..-|---..|-..|+| -+.++|..++
T Consensus 38 ~gdsYivL~---t~~~~~~~~~~~i~~W~G~~ss~de~g~aA~~tveLd~~lgg~~vq~Re~Qg~Es 101 (729)
T 1d0n_A 38 TGDAYVILK---TVQLRNGILQYDLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFES 101 (729)
T ss_dssp TTCEEEEEE---EEECTTSCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTSCCEEEEEETTCCC
T ss_pred CCCEEEEEE---eccCCCCccceEEEEEcCCCCCHHHHHHHHHHHHHHHHHcCCcceEEEEecCCCC
No 41
>1z7s_1 Human coxsackievirus A21; picornavirus, capsid protein, viral protein, icosahedral virus; HET: MYR G; 3.20A {Human coxsackievirus A21} PDB: 1z7z_1*
Probab=21.16 E-value=1.2e+02 Score=22.99 Aligned_cols=14 Identities=14% Similarity=0.366 Sum_probs=12.0
Q ss_pred EEEEEcCCCCCcch
Q 032333 90 FFIAWAPTASRIRA 103 (143)
Q Consensus 90 vfI~w~P~~a~vk~ 103 (143)
+-|+|+|.+||+..
T Consensus 150 ~qvmyvPpGAP~p~ 163 (298)
T 1z7s_1 150 YQIMYIPPGAPRPS 163 (298)
T ss_dssp EEEEEECTTSCCCS
T ss_pred EEEEEcCCCCCCCC
Confidence 46999999999875
No 42
>3fxt_A Nucleoside diphosphate-linked moiety X motif 6; nudix, NUDT6, GFG, FGF2AS, antisense basic fibroblast growth FGF-2 regulation, hydrolase; 2.30A {Homo sapiens}
Probab=21.01 E-value=81 Score=20.54 Aligned_cols=14 Identities=7% Similarity=0.235 Sum_probs=10.3
Q ss_pred eeeEEEEEEcCCCC
Q 032333 86 KSKIFFIAWAPTAS 99 (143)
Q Consensus 86 ~~k~vfI~w~P~~a 99 (143)
..-++|..|.|++.
T Consensus 99 ~dylmL~~WLpe~p 112 (113)
T 3fxt_A 99 SDSSTLTLWLREGP 112 (113)
T ss_dssp BTEEEEEEECCC--
T ss_pred CCeEEEEEecCcCC
Confidence 34799999999974
No 43
>1aym_1 HRV16, human rhinovirus 16 coat protein; RNA, site-directed mutagenesis, icosahedral virus; HET: MYR DAO; 2.15A {Human rhinovirus SP} SCOP: b.121.4.1 PDB: 1ayn_1* 1c8m_1* 1ncr_A* 1nd2_A* 1nd3_A* 1qju_1* 1qjx_1* 1qjy_1* 1d3e_1 1fpn_1* 1v9u_1* 3dpr_A* 3tn9_1 1r1a_1* 2hwd_1* 2hwe_1* 2hwf_1*
Probab=20.32 E-value=91 Score=23.62 Aligned_cols=15 Identities=13% Similarity=0.313 Sum_probs=12.5
Q ss_pred EEEEEcCCCCCcchh
Q 032333 90 FFIAWAPTASRIRAK 104 (143)
Q Consensus 90 vfI~w~P~~a~vk~K 104 (143)
.-|+|+|.+||+..+
T Consensus 140 ~qvmyvPPGap~p~~ 154 (285)
T 1aym_1 140 MQYMYVPPGAPIPTT 154 (285)
T ss_dssp EEEEEECTTSCCCSS
T ss_pred EEEEEcCCCCCCCCc
Confidence 469999999998754
Done!