BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032335
(143 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O04209|CLC2_ARATH Clathrin light chain 2 OS=Arabidopsis thaliana GN=CLC2 PE=1 SV=1
Length = 258
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/144 (54%), Positives = 102/144 (70%), Gaps = 21/144 (14%)
Query: 5 DSVDSVPVAEYTHSFD--DTAEQLNSAVDLSDDNNNSSFQSGDDAFASQTSVYGEYADG- 61
D+ +SVPV + SFD D+ + ++ + D S DD FA+ +S YG Y++G
Sbjct: 15 DASESVPV---SGSFDATDSFSAFDGSLQVED--------SVDDVFAAPSSDYGAYSNGD 63
Query: 62 ---GS----DGPILPPPSDMVPEEGFALREWRRENAIRLEEKEKKEKEMLNQIIEEAEEY 114
GS DGPILPPPS+M +EGFALREWRR+NAI+LEEKEK+EKE+L QIIEEA++Y
Sbjct: 64 GIFGSNGDHDGPILPPPSEMESDEGFALREWRRQNAIQLEEKEKREKELLKQIIEEADQY 123
Query: 115 KLEFYRKSIVTRENNKASNREREK 138
K EF++K VT ENNKA+NRE+EK
Sbjct: 124 KEEFHKKIEVTCENNKAANREKEK 147
>sp|F4J5M9|CLC3_ARATH Clathrin light chain 3 OS=Arabidopsis thaliana GN=At3g51890 PE=2
SV=1
Length = 258
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/72 (73%), Positives = 59/72 (81%)
Query: 67 ILPPPSDMVPEEGFALREWRRENAIRLEEKEKKEKEMLNQIIEEAEEYKLEFYRKSIVTR 126
ILPPPS M EEGFALREWRR NA+RLEEKEK+EKEM+ QI+E AE+YK EFY K VT
Sbjct: 85 ILPPPSAMEKEEGFALREWRRLNALRLEEKEKEEKEMVQQILEAAEQYKAEFYSKRNVTI 144
Query: 127 ENNKASNREREK 138
ENNK NRE+EK
Sbjct: 145 ENNKKLNREKEK 156
>sp|Q7XKE9|CLC1_ORYSJ Clathrin light chain 1 OS=Oryza sativa subsp. japonica
GN=Os04g0679100 PE=2 SV=1
Length = 301
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/77 (66%), Positives = 57/77 (74%)
Query: 62 GSDGPILPPPSDMVPEEGFALREWRRENAIRLEEKEKKEKEMLNQIIEEAEEYKLEFYRK 121
G DGPILPPP+ M EEG LREWRR+NAI LEEKE+KEKE+ QI+ EAEE+K FY K
Sbjct: 92 GGDGPILPPPAQMGAEEGILLREWRRQNAIVLEEKERKEKELRAQILAEAEEFKKAFYEK 151
Query: 122 SIVTRENNKASNREREK 138
I E NK NREREK
Sbjct: 152 RIQNCETNKVHNREREK 168
>sp|Q9SKU1|CLC1_ARATH Clathrin light chain 1 OS=Arabidopsis thaliana GN=At2g20760 PE=2
SV=1
Length = 338
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/76 (67%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
Query: 63 SDGPILPPPSDMVPEEGFALREWRRENAIRLEEKEKKEKEMLNQIIEEAEEYKLEFYRKS 122
SDGPILP P++M EEGF REWRR N I LEEKEKKEKEM NQII EAE++K FY K
Sbjct: 93 SDGPILPDPNEMR-EEGFQRREWRRLNTIHLEEKEKKEKEMRNQIITEAEDFKKAFYEKR 151
Query: 123 IVTRENNKASNREREK 138
T E NK NRE+EK
Sbjct: 152 DKTIETNKTDNREKEK 167
>sp|Q5Z402|CLC2_ORYSJ Clathrin light chain 2 OS=Oryza sativa subsp. japonica
GN=Os06g0731800 PE=2 SV=1
Length = 291
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/75 (62%), Positives = 57/75 (76%)
Query: 64 DGPILPPPSDMVPEEGFALREWRRENAIRLEEKEKKEKEMLNQIIEEAEEYKLEFYRKSI 123
+GP+LPPP+ M +EGF LREWRR+NAI LEEKEKKEKEM NQII +A+E+K F K
Sbjct: 76 NGPVLPPPNQMGADEGFLLREWRRQNAILLEEKEKKEKEMRNQIILDAKEFKKAFVEKRK 135
Query: 124 VTRENNKASNREREK 138
+ E +K NREREK
Sbjct: 136 LNVETSKDQNREREK 150
>sp|Q6Z3A8|CLC3_ORYSJ Clathrin light chain 3 OS=Oryza sativa subsp. japonica
GN=Os07g0461500 PE=3 SV=1
Length = 363
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 62 GSDGPILPPPSDMVPEEGFALREWRRENAIRLEEKEKKEKEMLNQIIEEAEEYKLEFYRK 121
G DGP+LPPP M EEG REWRR+NA+ LEEKE+KE+E +II EA+E+K F K
Sbjct: 133 GDDGPVLPPPEAMK-EEGILRREWRRQNALMLEEKERKERERRGEIIAEADEFKRSFAEK 191
Query: 122 SIVTRENNKASNREREK 138
+ + N+A NR+REK
Sbjct: 192 RKLNGDTNRAQNRDREK 208
>sp|Q8TCG1|CIP2A_HUMAN Protein CIP2A OS=Homo sapiens GN=KIAA1524 PE=1 SV=2
Length = 905
Score = 33.5 bits (75), Expect = 0.38, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 81 ALREWRRENAIRLEEKEKKEKEMLNQIIEEAEEYKL-EFYRKSIVTRENNKASNREREKS 139
+L+E ++ +L EKE++ KE+ NQ+++ E+KL ++K+ V E K +ERE
Sbjct: 768 SLKEQNEKSIAQLIEKEEQRKEVQNQLVD--REHKLANLHQKTKVQEEKIKTLQKEREDK 825
Query: 140 TE 141
E
Sbjct: 826 EE 827
>sp|P04975|CLCB_BOVIN Clathrin light chain B OS=Bos taurus GN=CLTB PE=1 SV=1
Length = 228
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%)
Query: 59 ADGGSDGPILPPPSDMVPEEGFALREWRRENAIRLEEKEKKEKEMLNQIIEEAEEYKLEF 118
A+G +DG +D + +E ++R+WR E RL+E + K M + E+A++ E+
Sbjct: 79 ANGPADGYAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVMEQEWREKAKKDLEEW 138
Query: 119 YRKSIVTRENNKASNREREKS 139
++ E NK +NR +K+
Sbjct: 139 NQRQSEQVEKNKINNRIADKA 159
>sp|O97827|LPHN3_BOVIN Latrophilin-3 OS=Bos taurus GN=LPHN3 PE=2 SV=1
Length = 1580
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 29/78 (37%)
Query: 2 STFDSVDSVPVAEYTHSFDDTAEQLNSAVDLSDDNNNSSFQSGDDAFASQTSVYGEYADG 61
++ ++ VP AE + T D D S G Q Y + G
Sbjct: 1491 TSMPALAGVPTAESVTTSTQTEPPPAKCGDAEDVYYKSMPNLGSRNHVHQLHTYYQLGRG 1550
Query: 62 GSDGPILPPPSDMVPEEG 79
SDG I+PP D P EG
Sbjct: 1551 SSDGFIVPPNKDGTPPEG 1568
>sp|A8T6P4|MYRIP_DANRE Rab effector MyRIP OS=Danio rerio GN=myrip PE=1 SV=1
Length = 838
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 5/52 (9%)
Query: 83 REWRRENAIRLEEKEKKEKEMLNQIIEEAE-----EYKLEFYRKSIVTRENN 129
RE RRE +++E+K++++KEM Q+ +E E E LE RKSI + N
Sbjct: 787 RERRREIEMQVEKKQERQKEMEKQLKQEQERQSEIERDLEKKRKSIRMEKRN 838
>sp|Q6IRU5|CLCB_MOUSE Clathrin light chain B OS=Mus musculus GN=Cltb PE=2 SV=1
Length = 229
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 52 TSVYGEY---ADGGSDGPILPPPSDMVPEEGFALREWRRENAIRLEEKEKKEKEMLNQII 108
T+V G+ A+G +DG +D + +E ++R+WR E RL+E + K +
Sbjct: 70 TTVNGDVFQEANGPADGYAAIAQADRLTQEPESIRKWREEQKKRLQELDAASKVTEQEWR 129
Query: 109 EEAEEYKLEFYRKSIVTRENNKASNREREKS 139
E+A++ E+ ++ E NK +NR +K+
Sbjct: 130 EKAKKDLEEWNQRQSEQVEKNKINNRIADKA 160
>sp|P08082|CLCB_RAT Clathrin light chain B OS=Rattus norvegicus GN=Cltb PE=1 SV=1
Length = 229
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 52 TSVYGEY---ADGGSDGPILPPPSDMVPEEGFALREWRRENAIRLEEKEKKEKEMLNQII 108
T+V G+ A+G +DG +D + +E ++R+WR E RL+E + K +
Sbjct: 70 TTVNGDVFQEANGPADGYAAIAQADRLTQEPESIRKWREEQKKRLQELDAASKVTEQEWR 129
Query: 109 EEAEEYKLEFYRKSIVTRENNKASNREREKS 139
E+A++ E+ ++ E NK +NR +K+
Sbjct: 130 EKAKKDLEEWNQRQSEQVEKNKINNRIADKA 160
>sp|Q6ZRS2|SRCAP_HUMAN Helicase SRCAP OS=Homo sapiens GN=SRCAP PE=1 SV=3
Length = 3230
Score = 30.4 bits (67), Expect = 3.1, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 11/64 (17%)
Query: 60 DGGSDGPILPPPSDMVPEEGFALRE----------WRRENAIRLEEKEKKEKEMLNQIIE 109
D DGP PP VP EGF+L + W + +A + E+ K E E+ +I E
Sbjct: 54 DSSLDGPPGPPDGATVPLEGFSLSQAADLANKGPKWEKSHA-EIAEQAKHEAEIETRIAE 112
Query: 110 EAEE 113
+E
Sbjct: 113 LRKE 116
>sp|Q6GIN8|SECA1_STAAR Protein translocase subunit SecA 1 OS=Staphylococcus aureus (strain
MRSA252) GN=secA1 PE=3 SV=1
Length = 843
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 6/64 (9%)
Query: 78 EGFALREWRRENAIRLEEKEKKEKEMLNQIIEEAEEYKLEFYRKSIVTRENNKASNRERE 137
+G LR + ++N +R + + + E+ + +++ EE +F KS+V E+N ERE
Sbjct: 739 QGIHLRSYAQQNPLR--DYQNEGHELFDIMMQNIEEDTCKFILKSVVQVEDNI----ERE 792
Query: 138 KSTE 141
K+TE
Sbjct: 793 KTTE 796
>sp|Q2YSH6|SECA_STAAB Protein translocase subunit SecA OS=Staphylococcus aureus (strain
bovine RF122 / ET3-1) GN=secA PE=3 SV=1
Length = 843
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 6/64 (9%)
Query: 78 EGFALREWRRENAIRLEEKEKKEKEMLNQIIEEAEEYKLEFYRKSIVTRENNKASNRERE 137
+G LR + ++N +R + + + E+ + +++ EE +F KS+V E+N ERE
Sbjct: 739 QGIHLRSYAQQNPLR--DYQNEGHELFDIMMQNIEEDTCKFILKSVVQVEDNI----ERE 792
Query: 138 KSTE 141
K+TE
Sbjct: 793 KTTE 796
>sp|Q7A1G4|SECA1_STAAW Protein translocase subunit SecA 1 OS=Staphylococcus aureus (strain
MW2) GN=secA1 PE=3 SV=1
Length = 843
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 6/64 (9%)
Query: 78 EGFALREWRRENAIRLEEKEKKEKEMLNQIIEEAEEYKLEFYRKSIVTRENNKASNRERE 137
+G LR + ++N +R + + + E+ + +++ EE +F KS+V E+N ERE
Sbjct: 739 QGIHLRSYAQQNPLR--DYQNEGHELFDIMMQNIEEDTCKFILKSVVQVEDNI----ERE 792
Query: 138 KSTE 141
K+TE
Sbjct: 793 KTTE 796
>sp|Q6GB77|SECA1_STAAS Protein translocase subunit SecA 1 OS=Staphylococcus aureus (strain
MSSA476) GN=secA1 PE=3 SV=1
Length = 843
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 6/64 (9%)
Query: 78 EGFALREWRRENAIRLEEKEKKEKEMLNQIIEEAEEYKLEFYRKSIVTRENNKASNRERE 137
+G LR + ++N +R + + + E+ + +++ EE +F KS+V E+N ERE
Sbjct: 739 QGIHLRSYAQQNPLR--DYQNEGHELFDIMMQNIEEDTCKFILKSVVQVEDNI----ERE 792
Query: 138 KSTE 141
K+TE
Sbjct: 793 KTTE 796
>sp|Q7A6R5|SECA1_STAAN Protein translocase subunit SecA 1 OS=Staphylococcus aureus (strain
N315) GN=secA1 PE=1 SV=1
Length = 843
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 6/64 (9%)
Query: 78 EGFALREWRRENAIRLEEKEKKEKEMLNQIIEEAEEYKLEFYRKSIVTRENNKASNRERE 137
+G LR + ++N +R + + + E+ + +++ EE +F KS+V E+N ERE
Sbjct: 739 QGIHLRSYAQQNPLR--DYQNEGHELFDIMMQNIEEDTCKFILKSVVQVEDNI----ERE 792
Query: 138 KSTE 141
K+TE
Sbjct: 793 KTTE 796
>sp|Q99VM2|SECA1_STAAM Protein translocase subunit SecA 1 OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=secA1 PE=1 SV=1
Length = 843
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 6/64 (9%)
Query: 78 EGFALREWRRENAIRLEEKEKKEKEMLNQIIEEAEEYKLEFYRKSIVTRENNKASNRERE 137
+G LR + ++N +R + + + E+ + +++ EE +F KS+V E+N ERE
Sbjct: 739 QGIHLRSYAQQNPLR--DYQNEGHELFDIMMQNIEEDTCKFILKSVVQVEDNI----ERE 792
Query: 138 KSTE 141
K+TE
Sbjct: 793 KTTE 796
>sp|A6QF62|SECA1_STAAE Protein translocase subunit SecA 1 OS=Staphylococcus aureus (strain
Newman) GN=secA1 PE=3 SV=1
Length = 843
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 6/64 (9%)
Query: 78 EGFALREWRRENAIRLEEKEKKEKEMLNQIIEEAEEYKLEFYRKSIVTRENNKASNRERE 137
+G LR + ++N +R + + + E+ + +++ EE +F KS+V E+N ERE
Sbjct: 739 QGIHLRSYAQQNPLR--DYQNEGHELFDIMMQNIEEDTCKFILKSVVQVEDNI----ERE 792
Query: 138 KSTE 141
K+TE
Sbjct: 793 KTTE 796
>sp|Q5HHR7|SECA1_STAAC Protein translocase subunit SecA 1 OS=Staphylococcus aureus (strain
COL) GN=secA1 PE=3 SV=1
Length = 843
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 6/64 (9%)
Query: 78 EGFALREWRRENAIRLEEKEKKEKEMLNQIIEEAEEYKLEFYRKSIVTRENNKASNRERE 137
+G LR + ++N +R + + + E+ + +++ EE +F KS+V E+N ERE
Sbjct: 739 QGIHLRSYAQQNPLR--DYQNEGHELFDIMMQNIEEDTCKFILKSVVQVEDNI----ERE 792
Query: 138 KSTE 141
K+TE
Sbjct: 793 KTTE 796
>sp|O06446|SECA1_STAA8 Protein translocase subunit SecA 1 OS=Staphylococcus aureus (strain
NCTC 8325) GN=secA1 PE=1 SV=2
Length = 843
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 6/64 (9%)
Query: 78 EGFALREWRRENAIRLEEKEKKEKEMLNQIIEEAEEYKLEFYRKSIVTRENNKASNRERE 137
+G LR + ++N +R + + + E+ + +++ EE +F KS+V E+N ERE
Sbjct: 739 QGIHLRSYAQQNPLR--DYQNEGHELFDIMMQNIEEDTCKFILKSVVQVEDNI----ERE 792
Query: 138 KSTE 141
K+TE
Sbjct: 793 KTTE 796
>sp|Q2FIN8|SECA1_STAA3 Protein translocase subunit SecA 1 OS=Staphylococcus aureus (strain
USA300) GN=secA1 PE=3 SV=1
Length = 843
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 6/64 (9%)
Query: 78 EGFALREWRRENAIRLEEKEKKEKEMLNQIIEEAEEYKLEFYRKSIVTRENNKASNRERE 137
+G LR + ++N +R + + + E+ + +++ EE +F KS+V E+N ERE
Sbjct: 739 QGIHLRSYAQQNPLR--DYQNEGHELFDIMMQNIEEDTCKFILKSVVQVEDNI----ERE 792
Query: 138 KSTE 141
K+TE
Sbjct: 793 KTTE 796
>sp|A7WZP8|SECA1_STAA1 Protein translocase subunit SecA 1 OS=Staphylococcus aureus (strain
Mu3 / ATCC 700698) GN=secA1 PE=3 SV=1
Length = 843
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 6/64 (9%)
Query: 78 EGFALREWRRENAIRLEEKEKKEKEMLNQIIEEAEEYKLEFYRKSIVTRENNKASNRERE 137
+G LR + ++N +R + + + E+ + +++ EE +F KS+V E+N ERE
Sbjct: 739 QGIHLRSYAQQNPLR--DYQNEGHELFDIMMQNIEEDTCKFILKSVVQVEDNI----ERE 792
Query: 138 KSTE 141
K+TE
Sbjct: 793 KTTE 796
>sp|P09497|CLCB_HUMAN Clathrin light chain B OS=Homo sapiens GN=CLTB PE=1 SV=1
Length = 229
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 52 TSVYGEY---ADGGSDGPILPPPSDMVPEEGFALREWRRENAIRLEEKEKKEKEMLNQII 108
T+V G+ A+G +DG +D + +E ++R+WR E RL+E + K +
Sbjct: 70 TTVNGDVFQEANGPADGYAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWR 129
Query: 109 EEAEEYKLEFYRKSIVTRENNKASNREREKS 139
E+A++ E+ ++ E NK +NR +K+
Sbjct: 130 EKAKKDLEEWNQRQSEQVEKNKINNRIADKA 160
>sp|Q8N6V9|TEX9_HUMAN Testis-expressed sequence 9 protein OS=Homo sapiens GN=TEX9 PE=2
SV=1
Length = 391
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Query: 104 LNQIIEEAEEYKLEFYRKSIVTRENNKASNREREKSTEV 142
LN+ +EEAE+YKLE + R+NNK E K EV
Sbjct: 299 LNRALEEAEKYKLELSK----LRQNNKDIANEEHKKIEV 333
>sp|B9DUP8|MIAA_STRU0 tRNA dimethylallyltransferase OS=Streptococcus uberis (strain ATCC
BAA-854 / 0140J) GN=miaA PE=3 SV=1
Length = 301
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 73 DMVPEEGFALREWRRENAIRLEEKEKKEKEMLNQ 106
D++ E+ +L+EW R AIR E ++ K++ NQ
Sbjct: 142 DLMAEKNISLKEWTRRRAIRAIELDRFGKDLQNQ 175
>sp|Q9NA80|SIN1_CAEEL Stress-activated map kinase-interacting protein 1 homolog
OS=Caenorhabditis elegans GN=sinh-1 PE=3 SV=3
Length = 642
Score = 29.3 bits (64), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 85 WRRENAIRLEEKEKKEKEMLNQIIEEAEEYKLE 117
W R+ A RL E+ KE+E L Q + + +EY +E
Sbjct: 290 WLRDEAFRLREETVKEREPLFQGLLDIKEYYME 322
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.305 0.124 0.335
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,633,882
Number of Sequences: 539616
Number of extensions: 2432547
Number of successful extensions: 10589
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 167
Number of HSP's that attempted gapping in prelim test: 9915
Number of HSP's gapped (non-prelim): 736
length of query: 143
length of database: 191,569,459
effective HSP length: 106
effective length of query: 37
effective length of database: 134,370,163
effective search space: 4971696031
effective search space used: 4971696031
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 55 (25.8 bits)