BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032338
(142 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P83877|TXN4A_MOUSE Thioredoxin-like protein 4A OS=Mus musculus GN=Txnl4a PE=2 SV=1
Length = 142
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 120/142 (84%), Positives = 135/142 (95%)
Query: 1 MSYLLPHLHSGWAVDQAILTEEERVVIIRFGHDWDDTCMQMDEVLSSVAETIKNFAVIYL 60
MSY+LPHLH+GW VDQAIL+EE+RVV+IRFGHDWD TCM+MDEVL S+AE +KNFAVIYL
Sbjct: 1 MSYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL 60
Query: 61 VDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVY 120
VDI+EVPDFN MYELYDP TVMFFFRNKHIMIDLGTGNNNKINWA++DKQE +DI+ETVY
Sbjct: 61 VDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVY 120
Query: 121 RGARKGRGLVIAPKDYSTKYRY 142
RGARKGRGLV++PKDYSTKYRY
Sbjct: 121 RGARKGRGLVVSPKDYSTKYRY 142
>sp|P83876|TXN4A_HUMAN Thioredoxin-like protein 4A OS=Homo sapiens GN=TXNL4A PE=1 SV=1
Length = 142
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 120/142 (84%), Positives = 135/142 (95%)
Query: 1 MSYLLPHLHSGWAVDQAILTEEERVVIIRFGHDWDDTCMQMDEVLSSVAETIKNFAVIYL 60
MSY+LPHLH+GW VDQAIL+EE+RVV+IRFGHDWD TCM+MDEVL S+AE +KNFAVIYL
Sbjct: 1 MSYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL 60
Query: 61 VDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVY 120
VDI+EVPDFN MYELYDP TVMFFFRNKHIMIDLGTGNNNKINWA++DKQE +DI+ETVY
Sbjct: 61 VDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVY 120
Query: 121 RGARKGRGLVIAPKDYSTKYRY 142
RGARKGRGLV++PKDYSTKYRY
Sbjct: 121 RGARKGRGLVVSPKDYSTKYRY 142
>sp|P87215|DIMI_SCHPO Mitosis protein dim1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=dim1 PE=1 SV=1
Length = 142
Score = 235 bits (599), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 105/142 (73%), Positives = 126/142 (88%)
Query: 1 MSYLLPHLHSGWAVDQAILTEEERVVIIRFGHDWDDTCMQMDEVLSSVAETIKNFAVIYL 60
MSY LPHLHSGW VDQAIL+E+ER+V+IRFG D D+ C++ DEVL +AE + N AVIYL
Sbjct: 1 MSYFLPHLHSGWHVDQAILSEQERLVVIRFGRDHDEECIKQDEVLYRIAEKVVNMAVIYL 60
Query: 61 VDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVY 120
VDI EVPDFN MYELYD +T+MFF+RNKH+MIDLGTGNNNKINW L+DKQE IDI+ET++
Sbjct: 61 VDIDEVPDFNKMYELYDRTTIMFFYRNKHMMIDLGTGNNNKINWPLEDKQEMIDIIETIF 120
Query: 121 RGARKGRGLVIAPKDYSTKYRY 142
RGARKG+GLVI+PKDYST++RY
Sbjct: 121 RGARKGKGLVISPKDYSTRHRY 142
>sp|Q75BD8|DIB1_ASHGO Spliceosomal protein DIB1 OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DIB1 PE=3 SV=1
Length = 143
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 90/138 (65%), Positives = 113/138 (81%)
Query: 2 SYLLPHLHSGWAVDQAILTEEERVVIIRFGHDWDDTCMQMDEVLSSVAETIKNFAVIYLV 61
S LPHLHSGW VDQAI+TEEER+V+IRFG D D +CM MDE+L S+AE + NFA IY+
Sbjct: 3 SVFLPHLHSGWHVDQAIVTEEERLVVIRFGSDSDRSCMLMDEILYSIAEKVVNFAAIYVC 62
Query: 62 DISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVYR 121
D +EVPDFN MYEL DP TVMFF++NKH+ D GTGNNNK+N+ + +KQE IDI+ETV+R
Sbjct: 63 DTTEVPDFNEMYELQDPMTVMFFYKNKHMRCDFGTGNNNKMNFVVDNKQEMIDIIETVFR 122
Query: 122 GARKGRGLVIAPKDYSTK 139
GAR+ +GLV++P DY+ K
Sbjct: 123 GARRNKGLVVSPYDYNYK 140
>sp|Q06819|DIB1_YEAST Spliceosomal protein DIB1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=DIB1 PE=1 SV=1
Length = 143
Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 89/138 (64%), Positives = 111/138 (80%)
Query: 2 SYLLPHLHSGWAVDQAILTEEERVVIIRFGHDWDDTCMQMDEVLSSVAETIKNFAVIYLV 61
S LLP L +GW VDQAI+TE +R+V+IRFG D CM MDE+LSS+AE ++NFAVIYL
Sbjct: 3 SVLLPQLRTGWHVDQAIVTETKRLVVIRFGRKNDRQCMIMDELLSSIAERVRNFAVIYLC 62
Query: 62 DISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVYR 121
DI EV DF+ MYEL DP TVMFF+ NKH+M D GTGNNNK+N+ + DKQE IDI+ET++R
Sbjct: 63 DIDEVSDFDEMYELTDPMTVMFFYHNKHMMCDFGTGNNNKLNFIVDDKQEMIDILETIFR 122
Query: 122 GARKGRGLVIAPKDYSTK 139
GARK +GLV++P DY+ K
Sbjct: 123 GARKNKGLVVSPYDYNHK 140
>sp|Q553S5|TXN4A_DICDI Thioredoxin-like protein 4A homolog OS=Dictyostelium discoideum
GN=txnl4a PE=3 SV=4
Length = 160
Score = 195 bits (495), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 84/132 (63%), Positives = 113/132 (85%)
Query: 11 GWAVDQAILTEEERVVIIRFGHDWDDTCMQMDEVLSSVAETIKNFAVIYLVDISEVPDFN 70
G + + + TEE+RVV+IRFGHD++ CM+ D++L+S+AE +KN AVIY+VDI+EVPD N
Sbjct: 2 GGLLIKQLSTEEDRVVVIRFGHDYNPECMKQDDILASIAEKVKNMAVIYVVDITEVPDLN 61
Query: 71 TMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVYRGARKGRGLV 130
+MYELYD MFF+RNKHIM+DLGTGNNNKINWAL +KQ+ IDI+ETVY+GARKG+GLV
Sbjct: 62 SMYELYDDCPTMFFYRNKHIMVDLGTGNNNKINWALTNKQDMIDIIETVYKGARKGKGLV 121
Query: 131 IAPKDYSTKYRY 142
+P+D+S +Y++
Sbjct: 122 NSPRDFSPQYKF 133
>sp|Q6FMI2|DIB1_CANGA Spliceosomal protein DIB1 OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=DIB1 PE=3
SV=1
Length = 142
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 85/136 (62%), Positives = 108/136 (79%)
Query: 4 LLPHLHSGWAVDQAILTEEERVVIIRFGHDWDDTCMQMDEVLSSVAETIKNFAVIYLVDI 63
L +LHSGW VDQAI+TEEER+V++RFG D CM MDE+L+SVAE ++NF IYL DI
Sbjct: 3 FLYNLHSGWHVDQAIVTEEERLVVVRFGRTADRECMLMDEMLASVAEKVRNFVAIYLCDI 62
Query: 64 SEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVYRGA 123
EVPDFN MYEL D +MFF++NKH+M D GTGNNNK+N+ DKQE IDI+ET++RGA
Sbjct: 63 DEVPDFNDMYELNDNMCLMFFYKNKHMMCDFGTGNNNKMNFLPDDKQELIDIMETIFRGA 122
Query: 124 RKGRGLVIAPKDYSTK 139
RK +G+V++P DY+ K
Sbjct: 123 RKNKGIVVSPYDYNHK 138
>sp|Q9NX01|TXN4B_HUMAN Thioredoxin-like protein 4B OS=Homo sapiens GN=TXNL4B PE=1 SV=1
Length = 149
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 90/136 (66%), Gaps = 2/136 (1%)
Query: 1 MSYLLPHLHSGWAVDQAILTEEERVVIIRFGHDWDDTCMQMDEVLSSVAETIKNFAVIYL 60
MS+LLP L S VDQAI + E+V+++RFG D D C+Q+D++LS + + A IYL
Sbjct: 1 MSFLLPKLTSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYL 60
Query: 61 VDISEVPDFNTMYEL-YDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETV 119
VD+ + + +++ Y PSTV FFF +H+ +D G+ ++ K + K KQ+FID++E +
Sbjct: 61 VDVDQTAVYTQYFDISYIPSTV-FFFNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVI 119
Query: 120 YRGARKGRGLVIAPKD 135
YRGA +G+ +V +P D
Sbjct: 120 YRGAMRGKLIVQSPID 135
>sp|Q8BUH1|TXN4B_MOUSE Thioredoxin-like protein 4B OS=Mus musculus GN=Txnl4b PE=2 SV=1
Length = 149
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 89/143 (62%), Gaps = 2/143 (1%)
Query: 1 MSYLLPHLHSGWAVDQAILTEEERVVIIRFGHDWDDTCMQMDEVLSSVAETIKNFAVIYL 60
MS+LLP L S VDQAI + E+ +++RFG D D C+Q+D++LS + + A IYL
Sbjct: 1 MSFLLPKLTSKKEVDQAIKSTAEKGLVLRFGRDEDPVCLQLDDILSKTSADLSKMAAIYL 60
Query: 61 VDISEVPDFNTMYEL-YDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETV 119
D+ P + +++ Y PSTV FFF +H+ D G+ ++ K + K KQ+FID++E +
Sbjct: 61 GDVDHTPVYTQYFDISYIPSTV-FFFNGQHMKGDYGSPDHTKFVGSFKTKQDFIDLIEVI 119
Query: 120 YRGARKGRGLVIAPKDYSTKYRY 142
YRGA +G+ +V +P D +Y
Sbjct: 120 YRGAMRGKLIVQSPIDPKNVPKY 142
>sp|O76003|GLRX3_HUMAN Glutaredoxin-3 OS=Homo sapiens GN=GLRX3 PE=1 SV=2
Length = 335
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 10 SGWAVDQAILTEEERVVIIRFGHDWDDTCMQMDEVLSSVAETIKNFAVIYLVDISEVPDF 69
S ++ + + + ++++ F W C QM+EV++ +A+ + + + L + VP+
Sbjct: 18 SAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELPQVSFVKL-EAEGVPEV 76
Query: 70 NTMYELYDPSTVMFFFRNKHI 90
+ YE+ T +FF ++ I
Sbjct: 77 SEKYEISSVPTFLFFKNSQKI 97
>sp|Q28ID3|GLRX3_XENTR Glutaredoxin-3 OS=Xenopus tropicalis GN=glrx3 PE=2 SV=2
Length = 326
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 10 SGWAVDQAILTEEERVVIIRFGHDWDDTCMQMDEVLSSVAETIKNFAVIYLVDISEVPDF 69
S +Q I + + ++ F W C QM+EV++ +A+ + L + VP+
Sbjct: 9 SAGQFEQLIQNSAKSLTVVHFWAPWAPQCTQMNEVMAELAKEQPQVMFVKL-EAEAVPEV 67
Query: 70 NTMYELYDPSTVMFFFRNKHI 90
+ YE+ T +FF ++ I
Sbjct: 68 SEKYEVTSVPTFLFFKNSQKI 88
>sp|Q5R9M3|THIO_PONAB Thioredoxin OS=Pongo abelii GN=TXN PE=3 SV=3
Length = 106
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 47/106 (44%), Gaps = 3/106 (2%)
Query: 4 LLPHLHSGWAVDQAILTEEERVVIIRFGHDWDDTCMQMDEVLSSVAETIKNFAVIYL-VD 62
++ + S A +A+ +++V++ F W C + S++E N VI+L VD
Sbjct: 1 MVKQIESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN--VIFLEVD 58
Query: 63 ISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKD 108
+ + D + E+ T FFF+ + + N K+ + +
Sbjct: 59 VDDCQDVASECEVKCMPTFQFFFKKGQKVGEFSGANKEKLEATINE 104
>sp|Q6H7E4|TRXM1_ORYSJ Thioredoxin M1, chloroplastic OS=Oryza sativa subsp. japonica
GN=Os02g0639900 PE=2 SV=1
Length = 173
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 2 SYLLPHL-HSGWAVDQAILTEEERVVIIRFGHDWDDTCMQMDEVLSSVAETIKNFAVIYL 60
S+ +P + S W Q+++ E E V++ F W C +D V+ +++ + Y
Sbjct: 65 SFQVPDVTKSTW---QSLVVESELPVLVEFWASWCGPCKMIDPVIGKLSKEYEGKLNCYK 121
Query: 61 VDISEVPDFNTMYELYDPSTVMFF 84
++ E PD T + + T+M F
Sbjct: 122 LNTDENPDIATQFGIRSIPTMMIF 145
>sp|Q58DA7|GLRX3_BOVIN Glutaredoxin-3 OS=Bos taurus GN=GLRX3 PE=2 SV=1
Length = 334
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 25 VVIIRFGHDWDDTCMQMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFF 84
++++ F W C QM++V++ +A+ + + + L + VP+ + YE+ T +FF
Sbjct: 32 LLVVHFWAPWAPQCAQMNDVMAELAKEHQQVSFVKL-EAEAVPEVSEKYEISSVPTFLFF 90
Query: 85 FRNKHI 90
++ I
Sbjct: 91 KNSQKI 96
>sp|Q1BFN7|PCKG_MYCSS Phosphoenolpyruvate carboxykinase [GTP] OS=Mycobacterium sp.
(strain MCS) GN=pckG PE=3 SV=1
Length = 609
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 55/135 (40%), Gaps = 25/135 (18%)
Query: 6 PHLHSG---WAVDQAILTEEERVVIIRFGHDWDDTCMQMDEVLSSVAETIKNFAVIYLVD 62
P H G W + A LT+ +RVV F ++ C ++ E L K
Sbjct: 13 PTEHEGLLAWVREVAELTQPDRVV---FTDGSEEECARLTEQLCEAGTFQK--------- 60
Query: 63 ISEVPDFNTMYELYDPSTVMFFFRNKHIM----IDLGTGNNNKINWALKDKQEFIDIVET 118
++E N+ L DPS V +I ID G NN W D E I+
Sbjct: 61 LNEEKKPNSYLALSDPSDVARVESRTYICSEREIDAGPTNN----WM--DPAEMRGIMTD 114
Query: 119 VYRGARKGRGLVIAP 133
+YRG+ +GR + + P
Sbjct: 115 LYRGSMRGRTMYVVP 129
>sp|A1U995|PCKG_MYCSK Phosphoenolpyruvate carboxykinase [GTP] OS=Mycobacterium sp.
(strain KMS) GN=pckG PE=3 SV=1
Length = 609
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 55/135 (40%), Gaps = 25/135 (18%)
Query: 6 PHLHSG---WAVDQAILTEEERVVIIRFGHDWDDTCMQMDEVLSSVAETIKNFAVIYLVD 62
P H G W + A LT+ +RVV F ++ C ++ E L K
Sbjct: 13 PTEHEGLLAWVREVAELTQPDRVV---FTDGSEEECARLTEQLCEAGTFQK--------- 60
Query: 63 ISEVPDFNTMYELYDPSTVMFFFRNKHIM----IDLGTGNNNKINWALKDKQEFIDIVET 118
++E N+ L DPS V +I ID G NN W D E I+
Sbjct: 61 LNEEKKPNSYLALSDPSDVARVESRTYICSEREIDAGPTNN----WM--DPAEMRGIMTD 114
Query: 119 VYRGARKGRGLVIAP 133
+YRG+ +GR + + P
Sbjct: 115 LYRGSMRGRTMYVVP 129
>sp|A3PSV1|PCKG_MYCSJ Phosphoenolpyruvate carboxykinase [GTP] OS=Mycobacterium sp.
(strain JLS) GN=pckG PE=3 SV=1
Length = 609
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 55/135 (40%), Gaps = 25/135 (18%)
Query: 6 PHLHSG---WAVDQAILTEEERVVIIRFGHDWDDTCMQMDEVLSSVAETIKNFAVIYLVD 62
P H G W + A LT+ +RVV F ++ C ++ E L K
Sbjct: 13 PTEHEGLLAWVREVAELTQPDRVV---FTDGSEEECARLTEQLCEAGTFQK--------- 60
Query: 63 ISEVPDFNTMYELYDPSTVMFFFRNKHIM----IDLGTGNNNKINWALKDKQEFIDIVET 118
++E N+ L DPS V +I ID G NN W D E I+
Sbjct: 61 LNEEKKPNSYLALSDPSDVARVESRTYICSEREIDAGPTNN----WM--DPAEMRGIMTD 114
Query: 119 VYRGARKGRGLVIAP 133
+YRG+ +GR + + P
Sbjct: 115 LYRGSMRGRTMYVVP 129
>sp|P47938|THIO1_DROME Thioredoxin-1 OS=Drosophila melanogaster GN=dhd PE=1 SV=1
Length = 107
Score = 35.8 bits (81), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 17/92 (18%), Positives = 42/92 (45%)
Query: 16 QAILTEEERVVIIRFGHDWDDTCMQMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYEL 75
+ I +++++++ F W C +M+ + S+A + AV+ +D+ + + Y++
Sbjct: 12 KRIEAADDKLIVLDFYATWCGPCKEMESTVKSLARKYSSKAVVLKIDVDKFEELTERYKV 71
Query: 76 YDPSTVMFFFRNKHIMIDLGTGNNNKINWALK 107
T +F +N+ + G + N K
Sbjct: 72 RSMPTFVFLRQNRRLASFAGADEHKLTNMMAK 103
>sp|Q8L7S9|TRXY2_ARATH Thioredoxin Y2, chloroplastic OS=Arabidopsis thaliana GN=At1g43560
PE=1 SV=1
Length = 167
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 32/67 (47%)
Query: 18 ILTEEERVVIIRFGHDWDDTCMQMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYD 77
+L ++ V++ F W C M +L+ V+ET+K+ + +D + P Y++
Sbjct: 71 LLQNSDKPVLVDFYATWCGPCQLMVPILNEVSETLKDIIAVVKIDTEKYPSLANKYQIEA 130
Query: 78 PSTVMFF 84
T + F
Sbjct: 131 LPTFILF 137
>sp|Q73TS2|PCKG_MYCPA Phosphoenolpyruvate carboxykinase [GTP] OS=Mycobacterium
paratuberculosis (strain ATCC BAA-968 / K-10) GN=pckG
PE=3 SV=1
Length = 609
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 17/131 (12%)
Query: 6 PHLHSG---WAVDQAILTEEERVVIIRFGHDWDDTCMQMDEVLSSVAETIKNFAVIYLVD 62
P H G W + A LT+ +RVV DE + +A + + ++
Sbjct: 13 PTNHQGLLSWVQEVAELTQPDRVVFAD----------GSDEEFNRLAAELVEAGTLKKLN 62
Query: 63 ISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVYRG 122
+ P N+ L DPS V +I + +G NW D E I+ +YRG
Sbjct: 63 EKKHP--NSYLALSDPSDVARVESRTYICTEEESGAGPTNNWM--DPTEMRSIMTDLYRG 118
Query: 123 ARKGRGLVIAP 133
+GR + + P
Sbjct: 119 CMRGRTMWVVP 129
>sp|Q9R6P9|THIO_MYCGA Thioredoxin OS=Mycoplasma gallisepticum (strain R(low / passage 15
/ clone 2)) GN=trxA PE=3 SV=2
Length = 100
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Query: 5 LPHLHSGWAVDQAILTEEERVVIIRFGHDWDDTCMQMDEVLSSVAETIKNFAVIYLVDIS 64
+ H+ + +DQ + T ++ V++ F +W C + + VA+ K++ + VD+
Sbjct: 1 MKHITNKAELDQLLSTNKK--VVVDFYANWCGPCKILGPIFEEVAQDKKDWTFVK-VDVD 57
Query: 65 EVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALK 107
+ + ++ YE+ TV+FF K +G N++ LK
Sbjct: 58 QANEISSEYEIRSIPTVIFFQDGKMADKRIGFIPKNELKELLK 100
>sp|P60226|THIO1_DROYA Thioredoxin-1 OS=Drosophila yakuba GN=dhd PE=2 SV=2
Length = 107
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/92 (18%), Positives = 40/92 (43%)
Query: 16 QAILTEEERVVIIRFGHDWDDTCMQMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYEL 75
+ I +++++++ F +W C M+ + S+A AV+ +D+ + + Y++
Sbjct: 12 KRIEAADDKLIVLDFYANWCGPCKDMESTVKSLARKYSTKAVVLKIDVDKFEELTERYKV 71
Query: 76 YDPSTVMFFFRNKHIMIDLGTGNNNKINWALK 107
T +F N+ + G + N K
Sbjct: 72 RSMPTFVFLRNNRRLAAFSGADEHKLTNMMAK 103
>sp|P07591|TRXM_SPIOL Thioredoxin M-type, chloroplastic OS=Spinacia oleracea PE=1 SV=2
Length = 181
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 28/64 (43%)
Query: 21 EEERVVIIRFGHDWDDTCMQMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPST 80
E E V++ F W C + V+ +A+ +Y ++ E P T Y + T
Sbjct: 90 ESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPT 149
Query: 81 VMFF 84
V+FF
Sbjct: 150 VLFF 153
>sp|P10472|THIO_CHLLT Thioredoxin OS=Chlorobium limicola f.sp. thiosulfatophilum
GN=trxA PE=1 SV=5
Length = 108
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 15/73 (20%), Positives = 34/73 (46%)
Query: 16 QAILTEEERVVIIRFGHDWDDTCMQMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYEL 75
Q + + ++ V++ F W CM + V+ +A+ + A+I +++ E P+ Y +
Sbjct: 13 QTEILDSDKAVLVDFWASWCGPCMMLGPVIEQLADDYEGKAIIAKLNVDENPNIAGQYGI 72
Query: 76 YDPSTVMFFFRNK 88
T++ K
Sbjct: 73 RSIPTMLIIKGGK 85
>sp|Q7X8R5|TRXM2_ORYSJ Thioredoxin M2, chloroplastic OS=Oryza sativa subsp. japonica
GN=Os04g0530600 PE=2 SV=2
Length = 180
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/69 (23%), Positives = 33/69 (47%)
Query: 16 QAILTEEERVVIIRFGHDWDDTCMQMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYEL 75
Q+++ E E V++ + W C +D V+ +++ + Y ++ E PD + Y +
Sbjct: 84 QSLVMESELPVLVGYWATWCGPCKMIDPVVGKLSKEYEGKLKCYKLNTDENPDIASQYGV 143
Query: 76 YDPSTVMFF 84
T+M F
Sbjct: 144 RSIPTMMIF 152
>sp|Q5YNB0|PCKG_NOCFA Phosphoenolpyruvate carboxykinase [GTP] OS=Nocardia farcinica
(strain IFM 10152) GN=pckG PE=3 SV=1
Length = 610
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 47/131 (35%), Gaps = 17/131 (12%)
Query: 6 PHLHS---GWAVDQAILTEEERVVIIRFGHDWDDTCMQMDEVLSSVAETIKNFAVIYLVD 62
P HS W + A LT+ ERVV W D DE + + + +D
Sbjct: 17 PTEHSELLAWVQEVAELTQPERVV-------WADGS---DEEWERLTDQLVEAGTFKRLD 66
Query: 63 ISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVYRG 122
+ P N+ L DPS V I NW D E + +YRG
Sbjct: 67 PKKKP--NSFLALSDPSDVARVESRTFICSRSEADAGPTNNWV--DPAEMRATMTELYRG 122
Query: 123 ARKGRGLVIAP 133
KGR + + P
Sbjct: 123 CMKGRTMYVVP 133
>sp|Q9AS75|TRH41_ORYSJ Thioredoxin H4-1 OS=Oryza sativa subsp. japonica GN=Os01g0168200
PE=2 SV=1
Length = 131
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Query: 17 AILTEEERVVIIRFGHDWDDTCMQMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELY 76
A ++ ++VI F W C + V + +++T F + +D+ E+ DF++ +++
Sbjct: 37 AEANKDGKIVIANFSAAWCGPCRVIAPVYAEMSQTYPQF-MFLTIDVDELMDFSSSWDIR 95
Query: 77 DPSTVMFFFRNKHIMIDLGTGNN 99
+T FFF +D G N
Sbjct: 96 --ATPTFFFLKNGEQVDKLVGAN 116
>sp|Q8KE49|THIO2_CHLTE Thioredoxin-2 OS=Chlorobium tepidum (strain ATCC 49652 / DSM
12025 / TLS) GN=trx2 PE=3 SV=3
Length = 109
Score = 32.3 bits (72), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 16/73 (21%), Positives = 33/73 (45%)
Query: 16 QAILTEEERVVIIRFGHDWDDTCMQMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYEL 75
QA + ++V ++ F W CM + V+ +A + A+I +++ E P+ Y +
Sbjct: 14 QAEILNSDKVALVDFWAAWCGPCMMLGPVIEELAGDYEGKAIIAKLNVDENPNTAGQYGI 73
Query: 76 YDPSTVMFFFRNK 88
T++ K
Sbjct: 74 RSIPTMLIIKGGK 86
>sp|Q7XSQ7|TRL33_ORYSJ Thioredoxin-like 3-3 OS=Oryza sativa subsp. japonica
GN=Os04g0560200 PE=2 SV=2
Length = 129
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 32/79 (40%), Gaps = 3/79 (3%)
Query: 19 LTEEERVVIIRFGHDWDDTCMQMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDP 78
L + +I +G W C Q+ + KN IY DI E P+ T Y P
Sbjct: 42 LKSSKSPAVINYGASWCRVCSQILPPFCRFSNEFKNLTFIY-ADIDECPE-TTQNIRYTP 99
Query: 79 STVMFFFRNKHIMIDLGTG 97
T F+ + + LGTG
Sbjct: 100 -TFHFYRDGEKVDEMLGTG 117
>sp|Q8IFW4|THIOT_DROME Thioredoxin-T OS=Drosophila melanogaster GN=TrxT PE=2 SV=1
Length = 157
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 33/71 (46%)
Query: 14 VDQAILTEEERVVIIRFGHDWDDTCMQMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMY 73
+DQ ++ E+++V+I F DW C + L +A + V+ V++ E D Y
Sbjct: 11 LDQQLILAEDKLVVIDFYADWCGPCKIIAPKLDELAHEYSDRVVVLKVNVDENEDITVEY 70
Query: 74 ELYDPSTVMFF 84
+ T +F
Sbjct: 71 NVNSMPTFVFI 81
>sp|P85801|TRXH_POPJC Thioredoxin H-type OS=Populus jackii PE=1 SV=1
Length = 139
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Query: 20 TEEERVVIIRFGHDWDDTCMQMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPS 79
+ + ++V+ F W C Q+ ++E + + ++D+ E+ DF+ +E+ +
Sbjct: 43 SRDGKIVLANFSARWCGPCKQIAPYYIELSENYPSL-MFLVIDVDELSDFSASWEIK--A 99
Query: 80 TVMFFFRNKHIMIDLGTGNN 99
T FFF +D G N
Sbjct: 100 TPTFFFLRDGQQVDKLVGAN 119
>sp|A1T1K1|PCKG_MYCVP Phosphoenolpyruvate carboxykinase [GTP] OS=Mycobacterium
vanbaalenii (strain DSM 7251 / PYR-1) GN=pckG PE=3 SV=1
Length = 609
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 53/136 (38%), Gaps = 27/136 (19%)
Query: 6 PHLHSG---WAVDQAILTEEERVVIIRFGHD-WDDTCMQMDEVLSSVAETIKNFAVIYLV 61
P H G W + A LT+ +RV + +D C Q+ E A T K +
Sbjct: 13 PTKHQGLLEWVREVAELTQPDRVAWADGSQEEYDRLCAQLVE-----AGTFKK------L 61
Query: 62 DISEVPDFNTMYELYDPSTVMFFFRNKHIM----IDLGTGNNNKINWALKDKQEFIDIVE 117
+ + P N+ L DPS V I ID G NN D E I+
Sbjct: 62 NPEKQP--NSYLALSDPSDVARVESRTFICSKREIDAGPTNN------WMDPAEMRGILT 113
Query: 118 TVYRGARKGRGLVIAP 133
+YRG +GR L + P
Sbjct: 114 DLYRGCMRGRTLWVVP 129
>sp|Q9PR63|GYRA_UREPA DNA gyrase subunit A OS=Ureaplasma parvum serovar 3 (strain ATCC
700970) GN=gyrA PE=3 SV=1
Length = 840
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 15/68 (22%)
Query: 45 LSSVAETIKNFAVIYLVDISEV------PDFNTMYELYDPSTVMFFF---------RNKH 89
L+ V + IK +A + V ISE+ PDF T E+Y S ++ +F R+K+
Sbjct: 204 LTEVCQAIKAYAKNHNVTISEIMEYLKGPDFPTGAEIYGDSGIIKYFNTGRGSVTIRSKY 263
Query: 90 IMIDLGTG 97
+ D+G G
Sbjct: 264 EIEDIGQG 271
>sp|P37395|THIO_CYACA Thioredoxin OS=Cyanidium caldarium GN=trxA PE=3 SV=1
Length = 107
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/85 (22%), Positives = 36/85 (42%)
Query: 23 ERVVIIRFGHDWDDTCMQMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVM 82
E++V++ F W C + V+ +A+ I ++ E P + Y + T+M
Sbjct: 20 EKLVLVDFWAPWCGPCRMISPVIDELAQEYVEQVKIVKINTDENPSISAEYGIRSIPTLM 79
Query: 83 FFFRNKHIMIDLGTGNNNKINWALK 107
F K + +G + + ALK
Sbjct: 80 LFKDGKRVDTVIGAVPKSTLTNALK 104
>sp|P42115|THIO_NEUCR Thioredoxin OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A
/ CBS 708.71 / DSM 1257 / FGSC 987) GN=trx PE=3 SV=1
Length = 127
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 4/95 (4%)
Query: 1 MSYLLPHLHSGWAVDQAILTEEERVVIIRFGHDWDDTCMQMDEVLSSVAET--IKNFAVI 58
MS + H++S A + A L + V+ F DW C + + + A+T I NF
Sbjct: 1 MSDGVKHINS--AQEFANLLNTTQYVVADFYADWCGPCKAIAPMYAQFAKTFSIPNFLAF 58
Query: 59 YLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMID 93
+++ V Y + T +FF K + ++
Sbjct: 59 AKINVDSVQQVAQHYRVSAMPTFLFFKNGKQVAVN 93
>sp|A5UKB0|VATD_METS3 V-type ATP synthase subunit D OS=Methanobrevibacter smithii (strain
PS / ATCC 35061 / DSM 861) GN=atpD PE=3 SV=1
Length = 231
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 6/45 (13%)
Query: 22 EERVVIIRFGHDWDDTCMQMDEVLSSVAETIKNFAVIYLVDISEV 66
EER +I R G+ + DT +Q+DE E+IK +L+++ EV
Sbjct: 114 EERSIIDR-GYSFSDTTIQLDEAAKKFEESIK-----FLIELGEV 152
>sp|A0QP32|PCKG_MYCS2 Phosphoenolpyruvate carboxykinase [GTP] OS=Mycobacterium smegmatis
(strain ATCC 700084 / mc(2)155) GN=pckG PE=1 SV=1
Length = 608
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 54/135 (40%), Gaps = 25/135 (18%)
Query: 6 PHLHSG---WAVDQAILTEEERVVIIRFGHDWDDTCMQMDEVLSSVAETIKNFAVIYLVD 62
P H G W + A LT+ +RVV D + + + + + + E ++
Sbjct: 13 PTKHQGLLAWVQEVAELTQPDRVVFA------DGSDEEYERLCAHLVEA----GTFQKLN 62
Query: 63 ISEVPDFNTMYELYDPSTVMFFFRNKHIM----IDLGTGNNNKINWALKDKQEFIDIVET 118
+ P N+ L DPS V I ID G NN W D E I+
Sbjct: 63 PEKQP--NSYLALSDPSDVARVESRTFICTEREIDAGPTNN----WM--DPAEMRGIMTD 114
Query: 119 VYRGARKGRGLVIAP 133
+YRG+ +GR L + P
Sbjct: 115 LYRGSMRGRTLYVVP 129
>sp|P02567|MYO1_CAEEL Myosin-1 OS=Caenorhabditis elegans GN=let-75 PE=2 SV=3
Length = 1938
Score = 30.4 bits (67), Expect = 3.6, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 25/45 (55%)
Query: 95 GTGNNNKINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTK 139
GT N +NW K+K D V +V + ++K LV +DY+T+
Sbjct: 584 GTVRYNVLNWLEKNKDPLNDTVVSVMKASKKNDLLVEIWQDYTTQ 628
>sp|Q9AGJ6|PCKG_MYCSM Phosphoenolpyruvate carboxykinase [GTP] OS=Mycobacterium smegmatis
GN=pckG PE=1 SV=1
Length = 605
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 54/135 (40%), Gaps = 25/135 (18%)
Query: 6 PHLHSG---WAVDQAILTEEERVVIIRFGHDWDDTCMQMDEVLSSVAETIKNFAVIYLVD 62
P H G W + A LT+ +RVV D + + + + + + E ++
Sbjct: 13 PTKHQGLLAWVQEVAELTQPDRVVFA------DGSDEEYERLCAHLVEA----GTFQKLN 62
Query: 63 ISEVPDFNTMYELYDPSTVMFFFRNKHIM----IDLGTGNNNKINWALKDKQEFIDIVET 118
+ P N+ L DPS V I ID G NN W D E I+
Sbjct: 63 PEKQP--NSYLALSDPSDVARVESRTFICTEREIDAGPTNN----WM--DPAEMRGIMTD 114
Query: 119 VYRGARKGRGLVIAP 133
+YRG+ +GR L + P
Sbjct: 115 LYRGSMRGRTLYVVP 129
>sp|Q9ZPH2|GRS17_ARATH Monothiol glutaredoxin-S17 OS=Arabidopsis thaliana GN=GRXS17 PE=2
SV=1
Length = 488
Score = 30.4 bits (67), Expect = 3.7, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 26 VIIRFGHDWDDTCMQMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFF 85
V++ F W D QMD+V S +A A + V+ E P+ + Y + +FF
Sbjct: 24 VVLHFWASWCDASKQMDQVFSHLATDFPR-AHFFRVEAEEHPEISEAYSVAAVPYFVFFK 82
Query: 86 RNKHI 90
K +
Sbjct: 83 DGKTV 87
>sp|Q7XQQ2|TRXM3_ORYSJ Thioredoxin M3, chloroplastic OS=Oryza sativa subsp. japonica
GN=Os04g0430800 PE=2 SV=4
Length = 175
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 14/59 (23%), Positives = 24/59 (40%)
Query: 26 VIIRFGHDWDDTCMQMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFF 84
V+I F W C + ++ +A+ Y +D + P T Y + TV+ F
Sbjct: 86 VLIEFWASWCGPCRMVHRIVDEIAQEYAGRIKCYKLDTDDYPQVATSYSIERIPTVLLF 144
>sp|Q8KEA4|THIO1_CHLTE Thioredoxin-1 OS=Chlorobium tepidum (strain ATCC 49652 / DSM
12025 / TLS) GN=trx1 PE=3 SV=1
Length = 101
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 14/67 (20%), Positives = 28/67 (41%)
Query: 18 ILTEEERVVIIRFGHDWDDTCMQMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYD 77
++ E V I F DW C + + +A K ++ V++ + PD +++
Sbjct: 8 LIRTSELPVFIDFWADWCGPCKMVAPSVKQLASEFKGRLIVVKVNVDQQPDAAARFQVQG 67
Query: 78 PSTVMFF 84
+M F
Sbjct: 68 IPALMLF 74
>sp|Q75GM1|TRXH5_ORYSJ Thioredoxin H5 OS=Oryza sativa subsp. japonica GN=Os05g0480200 PE=2
SV=1
Length = 135
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 17/83 (20%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Query: 9 HSGWAVDQAILTEEERVVIIRFGHDWDDTCMQMDEVLSSVAETIKNFAVIYL-VDISEVP 67
W + E + V+++F W C + + ++ +K ++++ VD+ E+P
Sbjct: 28 QKNWDNTMEEVAEHGKTVVLKFSAIWCTPCRNAAPLFAELS--LKYPDIVFVSVDVDEMP 85
Query: 68 DFNTMYELYDPSTVMFFFRNKHI 90
+ T Y++ T +F N+ I
Sbjct: 86 ELVTQYDVRATPTFIFMKNNEEI 108
>sp|P23466|CYAA_LACKL Adenylate cyclase OS=Lachancea kluyveri GN=CYR1 PE=3 SV=1
Length = 1839
Score = 29.6 bits (65), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Query: 4 LLPHLHSGWAVDQAILTEEERVVIIRFGHDWD--------DTCMQMDEVLSSVAETIKNF 55
LLPH+H+ + + +L+ + ++II W+ D + S AE +K++
Sbjct: 1363 LLPHIHASPDISETVLSYSDEMLIIATHKLWEYLDYETVCDISRENKSQPMSAAEKMKDY 1422
Query: 56 AVIY 59
A+ Y
Sbjct: 1423 AISY 1426
>sp|P65686|PCKG_MYCTU Phosphoenolpyruvate carboxykinase [GTP] OS=Mycobacterium
tuberculosis GN=pckG PE=3 SV=1
Length = 606
Score = 29.6 bits (65), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 53/136 (38%), Gaps = 27/136 (19%)
Query: 6 PHLHSG---WAVDQAILTEEERVVIIRFGHD-WDDTCMQMDEVLSSVAETIKNFAVIYLV 61
P H G W + A LT+ +RVV + + C Q+ E + +
Sbjct: 13 PTNHQGLLSWVEEVAELTQPDRVVFTDGSEEEFQRLCDQLVEAGT-------------FI 59
Query: 62 DISEVPDFNTMYELYDPSTVMFFFRNKHIM----IDLGTGNNNKINWALKDKQEFIDIVE 117
++ N+ L DPS V +I ID G NN W D E I++
Sbjct: 60 RLNPEKHKNSYLALSDPSDVARVESRTYICSAKEIDAGPTNN----WM--DPGEMRSIMK 113
Query: 118 TVYRGARKGRGLVIAP 133
+YRG +GR + + P
Sbjct: 114 DLYRGCMRGRTMYVVP 129
>sp|A5TYT6|PCKG_MYCTA Phosphoenolpyruvate carboxykinase [GTP] OS=Mycobacterium
tuberculosis (strain ATCC 25177 / H37Ra) GN=pckG PE=3
SV=1
Length = 606
Score = 29.6 bits (65), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 53/136 (38%), Gaps = 27/136 (19%)
Query: 6 PHLHSG---WAVDQAILTEEERVVIIRFGHD-WDDTCMQMDEVLSSVAETIKNFAVIYLV 61
P H G W + A LT+ +RVV + + C Q+ E + +
Sbjct: 13 PTNHQGLLSWVEEVAELTQPDRVVFTDGSEEEFQRLCDQLVEAGT-------------FI 59
Query: 62 DISEVPDFNTMYELYDPSTVMFFFRNKHIM----IDLGTGNNNKINWALKDKQEFIDIVE 117
++ N+ L DPS V +I ID G NN W D E I++
Sbjct: 60 RLNPEKHKNSYLALSDPSDVARVESRTYICSAKEIDAGPTNN----WM--DPGEMRSIMK 113
Query: 118 TVYRGARKGRGLVIAP 133
+YRG +GR + + P
Sbjct: 114 DLYRGCMRGRTMYVVP 129
>sp|C1AJN6|PCKG_MYCBT Phosphoenolpyruvate carboxykinase [GTP] OS=Mycobacterium bovis
(strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=pckG
PE=3 SV=1
Length = 606
Score = 29.6 bits (65), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 53/136 (38%), Gaps = 27/136 (19%)
Query: 6 PHLHSG---WAVDQAILTEEERVVIIRFGHD-WDDTCMQMDEVLSSVAETIKNFAVIYLV 61
P H G W + A LT+ +RVV + + C Q+ E + +
Sbjct: 13 PTNHQGLLSWVEEVAELTQPDRVVFTDGSEEEFQRLCDQLVEAGT-------------FI 59
Query: 62 DISEVPDFNTMYELYDPSTVMFFFRNKHIM----IDLGTGNNNKINWALKDKQEFIDIVE 117
++ N+ L DPS V +I ID G NN W D E I++
Sbjct: 60 RLNPEKHKNSYLALSDPSDVARVESRTYICSAKEIDAGPTNN----WM--DPGEMRSIMK 113
Query: 118 TVYRGARKGRGLVIAP 133
+YRG +GR + + P
Sbjct: 114 DLYRGCMRGRTMYVVP 129
>sp|A1KF31|PCKG_MYCBP Phosphoenolpyruvate carboxykinase [GTP] OS=Mycobacterium bovis
(strain BCG / Pasteur 1173P2) GN=pckG PE=3 SV=1
Length = 606
Score = 29.6 bits (65), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 53/136 (38%), Gaps = 27/136 (19%)
Query: 6 PHLHSG---WAVDQAILTEEERVVIIRFGHD-WDDTCMQMDEVLSSVAETIKNFAVIYLV 61
P H G W + A LT+ +RVV + + C Q+ E + +
Sbjct: 13 PTNHQGLLSWVEEVAELTQPDRVVFTDGSEEEFQRLCDQLVEAGT-------------FI 59
Query: 62 DISEVPDFNTMYELYDPSTVMFFFRNKHIM----IDLGTGNNNKINWALKDKQEFIDIVE 117
++ N+ L DPS V +I ID G NN W D E I++
Sbjct: 60 RLNPEKHKNSYLALSDPSDVARVESRTYICSAKEIDAGPTNN----WM--DPGEMRSIMK 113
Query: 118 TVYRGARKGRGLVIAP 133
+YRG +GR + + P
Sbjct: 114 DLYRGCMRGRTMYVVP 129
>sp|P65687|PCKG_MYCBO Phosphoenolpyruvate carboxykinase [GTP] OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=pckG PE=3 SV=1
Length = 606
Score = 29.6 bits (65), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 53/136 (38%), Gaps = 27/136 (19%)
Query: 6 PHLHSG---WAVDQAILTEEERVVIIRFGHD-WDDTCMQMDEVLSSVAETIKNFAVIYLV 61
P H G W + A LT+ +RVV + + C Q+ E + +
Sbjct: 13 PTNHQGLLSWVEEVAELTQPDRVVFTDGSEEEFQRLCDQLVEAGT-------------FI 59
Query: 62 DISEVPDFNTMYELYDPSTVMFFFRNKHIM----IDLGTGNNNKINWALKDKQEFIDIVE 117
++ N+ L DPS V +I ID G NN W D E I++
Sbjct: 60 RLNPEKHKNSYLALSDPSDVARVESRTYICSAKEIDAGPTNN----WM--DPGEMRSIMK 113
Query: 118 TVYRGARKGRGLVIAP 133
+YRG +GR + + P
Sbjct: 114 DLYRGCMRGRTMYVVP 129
>sp|Q54DP7|MYBR_DICDI Myb-like protein R OS=Dictyostelium discoideum GN=mybR PE=4 SV=2
Length = 394
Score = 29.3 bits (64), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 8/65 (12%)
Query: 66 VPDFNTMYELYDPSTVMF----FFRNKHIMIDLGT-GNNNKINWALKDKQEFIDIVETVY 120
V +F + E+ PS V+ K +M+++ T GN ++INW KQ F+ + +
Sbjct: 307 VKNFKSTQEIIKPSPVISGNWSLDEQKALMVEVSTLGNKSEINWFFISKQLFL---KGIS 363
Query: 121 RGARK 125
R AR+
Sbjct: 364 RNARE 368
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.139 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,523,679
Number of Sequences: 539616
Number of extensions: 2207340
Number of successful extensions: 4868
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 4842
Number of HSP's gapped (non-prelim): 59
length of query: 142
length of database: 191,569,459
effective HSP length: 105
effective length of query: 37
effective length of database: 134,909,779
effective search space: 4991661823
effective search space used: 4991661823
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)