BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032340
(142 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449518382|ref|XP_004166221.1| PREDICTED: uncharacterized protein LOC101228874 [Cucumis sativus]
Length = 383
Score = 246 bits (627), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 115/142 (80%), Positives = 129/142 (90%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
+S KSGSP+MEDIEAF TTYRARLD+AE+AKS+PEN SLEVSSPGVERVVRIP EL+RFK
Sbjct: 242 LSTKSGSPNMEDIEAFSTTYRARLDDAELAKSVPENISLEVSSPGVERVVRIPDELDRFK 301
Query: 61 DRAMYVKYVGETVTTGSPSESDGVFRLISFDMETECCTWGLADVRINREKAGKGRPLSKK 120
+RAMYVKY E VT S SESDGVF+L+SFD+E +CCTWG+ADV+INREKAGKGRPLSKK
Sbjct: 302 ERAMYVKYTNEVVTASSSSESDGVFKLVSFDIEAKCCTWGIADVKINREKAGKGRPLSKK 361
Query: 121 QREWRLNTTFDSLRLVRLHSDC 142
QREWRL T FDSLRLVRL+SDC
Sbjct: 362 QREWRLETPFDSLRLVRLYSDC 383
>gi|449462174|ref|XP_004148816.1| PREDICTED: uncharacterized protein LOC101204078 [Cucumis sativus]
Length = 312
Score = 246 bits (627), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 115/142 (80%), Positives = 129/142 (90%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
+S KSGSP+MEDIEAF TTYRARLD+AE+AKS+PEN SLEVSSPGVERVVRIP EL+RFK
Sbjct: 171 LSTKSGSPNMEDIEAFSTTYRARLDDAELAKSVPENISLEVSSPGVERVVRIPDELDRFK 230
Query: 61 DRAMYVKYVGETVTTGSPSESDGVFRLISFDMETECCTWGLADVRINREKAGKGRPLSKK 120
+RAMYVKY E VT S SESDGVF+L+SFD+E +CCTWG+ADV+INREKAGKGRPLSKK
Sbjct: 231 ERAMYVKYTNEVVTASSSSESDGVFKLVSFDIEAKCCTWGIADVKINREKAGKGRPLSKK 290
Query: 121 QREWRLNTTFDSLRLVRLHSDC 142
QREWRL T FDSLRLVRL+SDC
Sbjct: 291 QREWRLETPFDSLRLVRLYSDC 312
>gi|255570398|ref|XP_002526158.1| conserved hypothetical protein [Ricinus communis]
gi|223534535|gb|EEF36234.1| conserved hypothetical protein [Ricinus communis]
Length = 306
Score = 236 bits (602), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 112/141 (79%), Positives = 127/141 (90%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
++N+SGSP+MEDIEAF TTYR LDEAE+AK+IP N +LEVSSPGVER+VRIP EL+RFK
Sbjct: 165 LTNRSGSPTMEDIEAFSTTYRTWLDEAELAKTIPTNIALEVSSPGVERIVRIPEELDRFK 224
Query: 61 DRAMYVKYVGETVTTGSPSESDGVFRLISFDMETECCTWGLADVRINREKAGKGRPLSKK 120
DR+MYVKY ET SPSE+DGVFRLISFD+ETECCTWGLADVRINREK+GKGRPLSKK
Sbjct: 225 DRSMYVKYASETSGMESPSENDGVFRLISFDIETECCTWGLADVRINREKSGKGRPLSKK 284
Query: 121 QREWRLNTTFDSLRLVRLHSD 141
QREWRLNT FDSL LVRL+S+
Sbjct: 285 QREWRLNTRFDSLLLVRLYSE 305
>gi|225457765|ref|XP_002264003.1| PREDICTED: uncharacterized protein LOC100266148 [Vitis vinifera]
gi|302142766|emb|CBI19969.3| unnamed protein product [Vitis vinifera]
Length = 315
Score = 234 bits (598), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 112/142 (78%), Positives = 124/142 (87%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
+SNKSGSPSM DIEAF + YRA+LDEAEIA S+PEN SLEVSSPGVERVV+IP EL+RFK
Sbjct: 174 LSNKSGSPSMTDIEAFSSIYRAKLDEAEIAGSVPENLSLEVSSPGVERVVQIPQELDRFK 233
Query: 61 DRAMYVKYVGETVTTGSPSESDGVFRLISFDMETECCTWGLADVRINREKAGKGRPLSKK 120
+R MYVKYV E V GS ESDG+FRL+SFD+ET CCTWGLADVRINR KAGKGRPLSKK
Sbjct: 234 ERPMYVKYVTEGVAPGSTIESDGIFRLVSFDLETNCCTWGLADVRINRAKAGKGRPLSKK 293
Query: 121 QREWRLNTTFDSLRLVRLHSDC 142
QREWRLNT FDSL LVRL+S+
Sbjct: 294 QREWRLNTPFDSLCLVRLYSEI 315
>gi|147801247|emb|CAN61512.1| hypothetical protein VITISV_013332 [Vitis vinifera]
Length = 231
Score = 233 bits (594), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 112/141 (79%), Positives = 124/141 (87%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
+SNKSGSPSM DIEAF + YRA+LDEAEIA S+PEN SLEVSSPGVERVV+IP EL+RFK
Sbjct: 90 LSNKSGSPSMTDIEAFSSIYRAKLDEAEIAGSVPENLSLEVSSPGVERVVQIPQELDRFK 149
Query: 61 DRAMYVKYVGETVTTGSPSESDGVFRLISFDMETECCTWGLADVRINREKAGKGRPLSKK 120
+R MYVKYV E V GS ESDG+FRL+SFD+ET CCTWGLADVRINR KAGKGRPLSKK
Sbjct: 150 ERPMYVKYVTEGVAPGSTIESDGIFRLVSFDLETNCCTWGLADVRINRAKAGKGRPLSKK 209
Query: 121 QREWRLNTTFDSLRLVRLHSD 141
QREWRLNT FDSL LVRL+S+
Sbjct: 210 QREWRLNTPFDSLCLVRLYSE 230
>gi|224062938|ref|XP_002300938.1| predicted protein [Populus trichocarpa]
gi|222842664|gb|EEE80211.1| predicted protein [Populus trichocarpa]
Length = 313
Score = 229 bits (583), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 110/141 (78%), Positives = 125/141 (88%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
++NKSGSP+MEDIEAF TTYRARLDEAE+AK+I EN +LEVSSPGVERVVRIP +L+RFK
Sbjct: 172 LTNKSGSPNMEDIEAFSTTYRARLDEAELAKTITENITLEVSSPGVERVVRIPEDLDRFK 231
Query: 61 DRAMYVKYVGETVTTGSPSESDGVFRLISFDMETECCTWGLADVRINREKAGKGRPLSKK 120
DRAMYVKYV E S SESDGV RL+SFDMET+ CTWGLADVR+NREKAGKGRPLSKK
Sbjct: 232 DRAMYVKYVNEADAKDSSSESDGVLRLVSFDMETKYCTWGLADVRVNREKAGKGRPLSKK 291
Query: 121 QREWRLNTTFDSLRLVRLHSD 141
QREWRL+T F SLRLVR++ +
Sbjct: 292 QREWRLDTPFHSLRLVRVYPE 312
>gi|356518601|ref|XP_003527967.1| PREDICTED: uncharacterized protein LOC100803868 [Glycine max]
Length = 304
Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 104/141 (73%), Positives = 119/141 (84%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
+S KSGSPSMEDIEAF TTYRA+LDEAEIAK +P+N LEVSSPGVER+VRIP +L+RFK
Sbjct: 163 LSKKSGSPSMEDIEAFSTTYRAKLDEAEIAKVVPDNICLEVSSPGVERIVRIPDDLDRFK 222
Query: 61 DRAMYVKYVGETVTTGSPSESDGVFRLISFDMETECCTWGLADVRINREKAGKGRPLSKK 120
DR MYVKY +E DGVF+L SFDMET+CCTWGLADV++NR+KAGKGRPL+KK
Sbjct: 223 DRPMYVKYAINDDQNNPAAEGDGVFKLESFDMETKCCTWGLADVKVNRQKAGKGRPLNKK 282
Query: 121 QREWRLNTTFDSLRLVRLHSD 141
Q EWRL+T FDSLR VRLHSD
Sbjct: 283 QSEWRLSTPFDSLRFVRLHSD 303
>gi|356509322|ref|XP_003523399.1| PREDICTED: uncharacterized protein LOC100783320 [Glycine max]
Length = 307
Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 103/141 (73%), Positives = 120/141 (85%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
+S KSGSPS+EDIEAF TYRA+LDEAE+AKS+P+N LEVSSPGVER+VRIP +L+RFK
Sbjct: 166 LSKKSGSPSLEDIEAFSATYRAKLDEAELAKSVPDNICLEVSSPGVERIVRIPDDLDRFK 225
Query: 61 DRAMYVKYVGETVTTGSPSESDGVFRLISFDMETECCTWGLADVRINREKAGKGRPLSKK 120
+R MYVKY +E DGVFRL SFDMET+CCTWGLADV++NR+KAGKGRPL+KK
Sbjct: 226 ERPMYVKYAINDDLNNPAAEGDGVFRLESFDMETKCCTWGLADVKVNRQKAGKGRPLNKK 285
Query: 121 QREWRLNTTFDSLRLVRLHSD 141
QREWRL+T FDSLR VRLHSD
Sbjct: 286 QREWRLSTPFDSLRFVRLHSD 306
>gi|388510470|gb|AFK43301.1| unknown [Lotus japonicus]
Length = 327
Score = 218 bits (555), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 103/141 (73%), Positives = 124/141 (87%), Gaps = 1/141 (0%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
+SNKSGSP++EDIEAF TTYRA+LDEAE+ KS+PEN +LEVSSPGVERVVRIP +L+RFK
Sbjct: 185 LSNKSGSPNIEDIEAFSTTYRAKLDEAELTKSVPENLTLEVSSPGVERVVRIPDDLDRFK 244
Query: 61 DRAMYVKYVGETVTTGSPS-ESDGVFRLISFDMETECCTWGLADVRINREKAGKGRPLSK 119
DR+MYV+Y + + +PS E DGVF+L SFD++T+ CTW LADVR+NREKAGKGRPL+K
Sbjct: 245 DRSMYVRYAIDDDDSMNPSAEGDGVFKLESFDLDTKYCTWSLADVRVNREKAGKGRPLNK 304
Query: 120 KQREWRLNTTFDSLRLVRLHS 140
KQREWRL+T FDSLR VRLHS
Sbjct: 305 KQREWRLSTPFDSLRFVRLHS 325
>gi|30699240|ref|NP_849898.1| uncharacterized protein [Arabidopsis thaliana]
gi|62320812|dbj|BAD93751.1| hypothetical protein [Arabidopsis thaliana]
gi|110742469|dbj|BAE99153.1| hypothetical protein [Arabidopsis thaliana]
gi|114050645|gb|ABI49472.1| At1g77122 [Arabidopsis thaliana]
gi|332197817|gb|AEE35938.1| uncharacterized protein [Arabidopsis thaliana]
Length = 323
Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 101/142 (71%), Positives = 120/142 (84%), Gaps = 4/142 (2%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
++NK GSP+MEDIEAF T YRA+L EAE+AKSIP+N SLEVSSPGVERVVRIP +L+R+K
Sbjct: 186 LTNKFGSPTMEDIEAFSTIYRAKLAEAELAKSIPDNISLEVSSPGVERVVRIPQDLDRYK 245
Query: 61 DRAMYVKYVGETVTTGSPSESDGVFRLISFDMETECCTWGLADVRINREKAGKGRPLSKK 120
DR MYV+Y E T E DG+FRL+SFD+E + C WG+AD+R+NREKAGKGRPLSKK
Sbjct: 246 DRPMYVRYTNEDTET----EGDGIFRLVSFDVEAKICIWGIADIRVNREKAGKGRPLSKK 301
Query: 121 QREWRLNTTFDSLRLVRLHSDC 142
QREWRL T F+SLRLVRLHS+C
Sbjct: 302 QREWRLETAFESLRLVRLHSEC 323
>gi|297842485|ref|XP_002889124.1| hypothetical protein ARALYDRAFT_476875 [Arabidopsis lyrata subsp.
lyrata]
gi|297334965|gb|EFH65383.1| hypothetical protein ARALYDRAFT_476875 [Arabidopsis lyrata subsp.
lyrata]
Length = 318
Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 100/142 (70%), Positives = 118/142 (83%), Gaps = 4/142 (2%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
++NK GSP+MEDIEA+ T YRA+L EA +AKSIP+N SLEVSSPGVERVVRIP +L+R+K
Sbjct: 181 LTNKFGSPTMEDIEAYSTIYRAKLAEAGLAKSIPDNISLEVSSPGVERVVRIPQDLDRYK 240
Query: 61 DRAMYVKYVGETVTTGSPSESDGVFRLISFDMETECCTWGLADVRINREKAGKGRPLSKK 120
DR MYV+Y E T E DG+FRLISFD+E + C WG+AD R+NREKAGKGRPLSKK
Sbjct: 241 DRPMYVRYTNEDTET----EGDGIFRLISFDVEAKSCIWGIADTRVNREKAGKGRPLSKK 296
Query: 121 QREWRLNTTFDSLRLVRLHSDC 142
QREWRL T F+SLRLVRLHS+C
Sbjct: 297 QREWRLETAFESLRLVRLHSEC 318
>gi|218194896|gb|EEC77323.1| hypothetical protein OsI_15994 [Oryza sativa Indica Group]
Length = 327
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/147 (66%), Positives = 120/147 (81%), Gaps = 8/147 (5%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
MS + GSP+++DIEAF YRA++D+AE A IP+N SLEVSSPGVERV+RIP +LERFK
Sbjct: 184 MSTRYGSPTIDDIEAFTIAYRAKMDDAESAGRIPQNISLEVSSPGVERVIRIPDDLERFK 243
Query: 61 DRAMYVKYV-----GETVTTGSPSESDGVFRLISFDMETECCTWGLADVRINREKAGKGR 115
+RAMYV+Y GE +T P E DGVFRLIS+DM+ CTWG+ADV+INR++AGKGR
Sbjct: 244 ERAMYVRYTITSDGGEGMT---PQEGDGVFRLISYDMDLCECTWGIADVKINRQQAGKGR 300
Query: 116 PLSKKQREWRLNTTFDSLRLVRLHSDC 142
PLSKKQREWRL T F+SL+LVR+HSDC
Sbjct: 301 PLSKKQREWRLQTPFESLKLVRVHSDC 327
>gi|116310789|emb|CAH67581.1| H0315A08.11 [Oryza sativa Indica Group]
Length = 326
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/147 (66%), Positives = 120/147 (81%), Gaps = 8/147 (5%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
MS + GSP+++DIEAF YRA++D+AE A IP+N SLEVSSPGVERV+RIP +LERFK
Sbjct: 183 MSTRYGSPTIDDIEAFTIAYRAKMDDAESAGRIPQNISLEVSSPGVERVIRIPDDLERFK 242
Query: 61 DRAMYVKYV-----GETVTTGSPSESDGVFRLISFDMETECCTWGLADVRINREKAGKGR 115
+RAMYV+Y GE +T P E DGVFRLIS+DM+ CTWG+ADV+INR++AGKGR
Sbjct: 243 ERAMYVRYTITSDGGEGMT---PQEGDGVFRLISYDMDLCECTWGIADVKINRQQAGKGR 299
Query: 116 PLSKKQREWRLNTTFDSLRLVRLHSDC 142
PLSKKQREWRL T F+SL+LVR+HSDC
Sbjct: 300 PLSKKQREWRLQTPFESLKLVRVHSDC 326
>gi|115458524|ref|NP_001052862.1| Os04g0438300 [Oryza sativa Japonica Group]
gi|38344074|emb|CAE02749.2| OSJNBa0006B20.18 [Oryza sativa Japonica Group]
gi|113564433|dbj|BAF14776.1| Os04g0438300 [Oryza sativa Japonica Group]
gi|215694700|dbj|BAG89891.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222628915|gb|EEE61047.1| hypothetical protein OsJ_14901 [Oryza sativa Japonica Group]
Length = 327
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/147 (66%), Positives = 120/147 (81%), Gaps = 8/147 (5%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
MS + GSP+++DIEAF YRA++D+AE A IP+N SLEVSSPGVERV+RIP +LERFK
Sbjct: 184 MSTRYGSPTIDDIEAFTIAYRAKIDDAESAGRIPQNISLEVSSPGVERVIRIPDDLERFK 243
Query: 61 DRAMYVKYV-----GETVTTGSPSESDGVFRLISFDMETECCTWGLADVRINREKAGKGR 115
+RAMYV+Y GE +T P E DGVFRLIS+DM+ CTWG+ADV+INR++AGKGR
Sbjct: 244 ERAMYVRYTITSDGGEGMT---PQEGDGVFRLISYDMDLCECTWGIADVKINRQQAGKGR 300
Query: 116 PLSKKQREWRLNTTFDSLRLVRLHSDC 142
PLSKKQREWRL T F+SL+LVR+HSDC
Sbjct: 301 PLSKKQREWRLQTPFESLKLVRVHSDC 327
>gi|219363185|ref|NP_001136801.1| hypothetical protein [Zea mays]
gi|194697162|gb|ACF82665.1| unknown [Zea mays]
gi|414587132|tpg|DAA37703.1| TPA: hypothetical protein ZEAMMB73_490350 [Zea mays]
Length = 142
Score = 202 bits (514), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 93/142 (65%), Positives = 116/142 (81%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
MS + GSP+++DIEA+ YRA+LDEAE A IP+N SLEVSSPGVERV+RIP ELERFK
Sbjct: 1 MSTRYGSPTIDDIEAYTIAYRAKLDEAESAGKIPKNISLEVSSPGVERVIRIPEELERFK 60
Query: 61 DRAMYVKYVGETVTTGSPSESDGVFRLISFDMETECCTWGLADVRINREKAGKGRPLSKK 120
+RAMYV+Y + +P E DGV LIS+DM+ CTWG+ADV+INR+++GKGRPLSKK
Sbjct: 61 ERAMYVRYTTASDEATTPQEGDGVLTLISYDMDLRECTWGIADVKINRQQSGKGRPLSKK 120
Query: 121 QREWRLNTTFDSLRLVRLHSDC 142
QREWRL T F+SL+LVRL+S+C
Sbjct: 121 QREWRLQTPFESLKLVRLYSEC 142
>gi|195649031|gb|ACG43983.1| hypothetical protein [Zea mays]
Length = 319
Score = 202 bits (514), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 93/142 (65%), Positives = 116/142 (81%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
MS + GSP+++DIEA+ YRA+LDEAE A IP+N SLEVSSPGVERV+RIP ELERFK
Sbjct: 178 MSTRYGSPTIDDIEAYTIAYRAKLDEAESAGKIPKNISLEVSSPGVERVIRIPEELERFK 237
Query: 61 DRAMYVKYVGETVTTGSPSESDGVFRLISFDMETECCTWGLADVRINREKAGKGRPLSKK 120
+RAMYV+Y + +P E DGV LIS+DM+ CTWG+ADV+INR+++GKGRPLSKK
Sbjct: 238 ERAMYVRYTTASDEATTPQEGDGVLTLISYDMDLRECTWGIADVKINRQQSGKGRPLSKK 297
Query: 121 QREWRLNTTFDSLRLVRLHSDC 142
QREWRL T F+SL+LVRL+S+C
Sbjct: 298 QREWRLQTPFESLKLVRLYSEC 319
>gi|414587129|tpg|DAA37700.1| TPA: hypothetical protein ZEAMMB73_490350 [Zea mays]
Length = 319
Score = 202 bits (514), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 93/142 (65%), Positives = 116/142 (81%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
MS + GSP+++DIEA+ YRA+LDEAE A IP+N SLEVSSPGVERV+RIP ELERFK
Sbjct: 178 MSTRYGSPTIDDIEAYTIAYRAKLDEAESAGKIPKNISLEVSSPGVERVIRIPEELERFK 237
Query: 61 DRAMYVKYVGETVTTGSPSESDGVFRLISFDMETECCTWGLADVRINREKAGKGRPLSKK 120
+RAMYV+Y + +P E DGV LIS+DM+ CTWG+ADV+INR+++GKGRPLSKK
Sbjct: 238 ERAMYVRYTTASDEATTPQEGDGVLTLISYDMDLRECTWGIADVKINRQQSGKGRPLSKK 297
Query: 121 QREWRLNTTFDSLRLVRLHSDC 142
QREWRL T F+SL+LVRL+S+C
Sbjct: 298 QREWRLQTPFESLKLVRLYSEC 319
>gi|357163629|ref|XP_003579795.1| PREDICTED: uncharacterized protein LOC100840782 [Brachypodium
distachyon]
Length = 321
Score = 201 bits (512), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 93/142 (65%), Positives = 117/142 (82%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
MS + GSP+++DIEA+ YRA+LD+AE A IP N SLEVSSPGVERV+R+P ELERFK
Sbjct: 180 MSTRYGSPTIDDIEAYTIAYRAKLDDAESAGRIPNNVSLEVSSPGVERVIRVPGELERFK 239
Query: 61 DRAMYVKYVGETVTTGSPSESDGVFRLISFDMETECCTWGLADVRINREKAGKGRPLSKK 120
+RAMYV+YV + +P E DGVFRLIS+DM+ CTWG+ADV+INR++ GKGRPLSKK
Sbjct: 240 ERAMYVRYVTRSEDEATPQEGDGVFRLISYDMDLCECTWGIADVKINRQQTGKGRPLSKK 299
Query: 121 QREWRLNTTFDSLRLVRLHSDC 142
QREWRL T F+SL+LVR++S+C
Sbjct: 300 QREWRLQTPFESLKLVRVYSEC 321
>gi|242075876|ref|XP_002447874.1| hypothetical protein SORBIDRAFT_06g017270 [Sorghum bicolor]
gi|241939057|gb|EES12202.1| hypothetical protein SORBIDRAFT_06g017270 [Sorghum bicolor]
Length = 327
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 91/142 (64%), Positives = 115/142 (80%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
MS + GSP+++DIEA+ YRA+LD+AE IP+N SLEVSSPGVERV+RIP ELERFK
Sbjct: 186 MSTRYGSPTIDDIEAYTIAYRAKLDDAESTGKIPKNISLEVSSPGVERVIRIPEELERFK 245
Query: 61 DRAMYVKYVGETVTTGSPSESDGVFRLISFDMETECCTWGLADVRINREKAGKGRPLSKK 120
+RAMYV+Y + +P E DGV RLIS+DM+ C WG+ADV+INR+++GKGRPLSKK
Sbjct: 246 ERAMYVRYTTTSDEAATPQEGDGVLRLISYDMDLRECIWGIADVKINRQQSGKGRPLSKK 305
Query: 121 QREWRLNTTFDSLRLVRLHSDC 142
QREWRL T F+SL+LVRL+S+C
Sbjct: 306 QREWRLQTPFESLKLVRLYSEC 327
>gi|326495670|dbj|BAJ85931.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 335
Score = 194 bits (494), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 89/142 (62%), Positives = 117/142 (82%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
MS + GSP+++DIEA+ YRA+LD+AE A IP+N SLEVSSPGVERV+R+P +LERFK
Sbjct: 194 MSTRYGSPTIDDIEAYTIAYRAKLDDAESAGRIPKNVSLEVSSPGVERVIRVPDDLERFK 253
Query: 61 DRAMYVKYVGETVTTGSPSESDGVFRLISFDMETECCTWGLADVRINREKAGKGRPLSKK 120
+R+MYV+YV + +P E DGVFRLIS+D++ CTWG+ADV+INR++ GKGRPLSKK
Sbjct: 254 ERSMYVRYVITSKDAATPQEGDGVFRLISYDVDLCECTWGIADVKINRQQTGKGRPLSKK 313
Query: 121 QREWRLNTTFDSLRLVRLHSDC 142
Q EWRL T F+SL+LVR++S+C
Sbjct: 314 QGEWRLQTPFESLKLVRVYSEC 335
>gi|218190735|gb|EEC73162.1| hypothetical protein OsI_07201 [Oryza sativa Indica Group]
Length = 829
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/108 (70%), Positives = 90/108 (83%), Gaps = 8/108 (7%)
Query: 40 EVSSPGVERVVRIPLELERFKDRAMYVKYV-----GETVTTGSPSESDGVFRLISFDMET 94
EVSSPGVERV+RIP +LERFK+RAMYV+Y GE +T P E DGVFRLIS+DM+
Sbjct: 725 EVSSPGVERVIRIPDDLERFKERAMYVRYTITSDGGEGMT---PQEGDGVFRLISYDMDL 781
Query: 95 ECCTWGLADVRINREKAGKGRPLSKKQREWRLNTTFDSLRLVRLHSDC 142
CTWG+ADV+INR++AGKGRPLSKKQREWRL T F+SL+LVR+HSDC
Sbjct: 782 CECTWGIADVKINRQQAGKGRPLSKKQREWRLQTPFESLKLVRVHSDC 829
>gi|168032332|ref|XP_001768673.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680172|gb|EDQ66611.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 586
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/141 (51%), Positives = 105/141 (74%), Gaps = 1/141 (0%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
+S+K GSPSM++I+ F +TY LD+A K++P++ +LEVSSPG ERVVRIP +LERFK
Sbjct: 446 LSDKYGSPSMDEIQKFSSTYSKALDKAGEEKTVPDDLALEVSSPGAERVVRIPQDLERFK 505
Query: 61 DRAMYVKYVGETVTTGSPSESDGVFRLISFDMETECCTWGLADVRINREKAGKGRPLSKK 120
D MYV Y+ + + S + DG+ L SFD+E+ W LA+VR+NR+ AGKGR +++K
Sbjct: 506 DLPMYVSYIETSSDSSSEEK-DGILELESFDVESGSAKWKLANVRLNRDLAGKGRGMNRK 564
Query: 121 QREWRLNTTFDSLRLVRLHSD 141
QR+WRL+ +F++ R+VRL+ D
Sbjct: 565 QRDWRLDLSFENTRMVRLYID 585
>gi|115470641|ref|NP_001058919.1| Os07g0155200 [Oryza sativa Japonica Group]
gi|50509569|dbj|BAD31346.1| unknown protein [Oryza sativa Japonica Group]
gi|113610455|dbj|BAF20833.1| Os07g0155200 [Oryza sativa Japonica Group]
gi|215686454|dbj|BAG87671.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737697|dbj|BAG96827.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218199109|gb|EEC81536.1| hypothetical protein OsI_24944 [Oryza sativa Indica Group]
gi|222636456|gb|EEE66588.1| hypothetical protein OsJ_23139 [Oryza sativa Japonica Group]
Length = 301
Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 64/143 (44%), Positives = 98/143 (68%), Gaps = 2/143 (1%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
++N+ G P +E+IE+F Y+ +LDE IP + ++EVSSPG ER++++P +L+RFK
Sbjct: 159 LTNRYGCPGIEEIESFNKLYKQKLDELIEQGEIPLDLAIEVSSPGAERLLKVPKDLDRFK 218
Query: 61 DRAMYVKYV--GETVTTGSPSESDGVFRLISFDMETECCTWGLADVRINREKAGKGRPLS 118
D AM V+Y+ G+ V + DG+F L S D++ E C W LADV+ NR AGKGRPL+
Sbjct: 219 DMAMRVQYLVEGDDVVPKQILQKDGIFLLESVDIQAEHCIWKLADVKENRAAAGKGRPLN 278
Query: 119 KKQREWRLNTTFDSLRLVRLHSD 141
+K+R+WRL T+F +++ L+ D
Sbjct: 279 RKKRDWRLQTSFQAVKKATLYLD 301
>gi|297738103|emb|CBI27304.3| unnamed protein product [Vitis vinifera]
Length = 310
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/139 (49%), Positives = 91/139 (65%), Gaps = 2/139 (1%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
+SNK G PSME+IE + Y+ +LDE IP N ++EVSSPG ER++++P +L+RFK
Sbjct: 171 LSNKYGCPSMEEIERYNLEYKKKLDEMGALGEIPHNLAIEVSSPGAERLLKVPDDLDRFK 230
Query: 61 DRAMYVKYVGETVTTGSPSESDGVFRLISFDMETECCTWGLADVRINREKAGKGRPLSKK 120
D M V YV + T E DGVF L S E+ C W LA+VR NR+ GKGRPLS+K
Sbjct: 231 DMPMRVSYVEDVETQC--LEKDGVFMLESIKTESANCVWKLANVRENRDPLGKGRPLSRK 288
Query: 121 QREWRLNTTFDSLRLVRLH 139
Q++WRLN F+ R V L+
Sbjct: 289 QKDWRLNLPFEMFRRVTLY 307
>gi|225423440|ref|XP_002273771.1| PREDICTED: uncharacterized protein LOC100259261 [Vitis vinifera]
Length = 223
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/139 (49%), Positives = 91/139 (65%), Gaps = 2/139 (1%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
+SNK G PSME+IE + Y+ +LDE IP N ++EVSSPG ER++++P +L+RFK
Sbjct: 84 LSNKYGCPSMEEIERYNLEYKKKLDEMGALGEIPHNLAIEVSSPGAERLLKVPDDLDRFK 143
Query: 61 DRAMYVKYVGETVTTGSPSESDGVFRLISFDMETECCTWGLADVRINREKAGKGRPLSKK 120
D M V YV + T E DGVF L S E+ C W LA+VR NR+ GKGRPLS+K
Sbjct: 144 DMPMRVSYVEDVETQC--LEKDGVFMLESIKTESANCVWKLANVRENRDPLGKGRPLSRK 201
Query: 121 QREWRLNTTFDSLRLVRLH 139
Q++WRLN F+ R V L+
Sbjct: 202 QKDWRLNLPFEMFRRVTLY 220
>gi|147774154|emb|CAN72408.1| hypothetical protein VITISV_038204 [Vitis vinifera]
Length = 1721
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/134 (50%), Positives = 88/134 (65%), Gaps = 2/134 (1%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
+SNK G PSME+IE + Y+ +LDE IP N ++EVSSPG ER++++P +L+RFK
Sbjct: 1469 LSNKYGCPSMEEIERYNLEYKKKLDEMGALGEIPHNLAIEVSSPGAERLLKVPDDLDRFK 1528
Query: 61 DRAMYVKYVGETVTTGSPSESDGVFRLISFDMETECCTWGLADVRINREKAGKGRPLSKK 120
D M V YV + T E DGVF L S E+ C W LA+VR NR+ GKGRPLS+K
Sbjct: 1529 DMPMRVSYVEDVETQC--LEKDGVFMLESIKTESANCVWKLANVRENRDPLGKGRPLSRK 1586
Query: 121 QREWRLNTTFDSLR 134
Q++WRLN F+ R
Sbjct: 1587 QKDWRLNLPFEMFR 1600
>gi|326515564|dbj|BAK07028.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 294
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/141 (46%), Positives = 97/141 (68%), Gaps = 3/141 (2%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
++++ G P +E+IE F Y+ +LDE IP + +LE+SSPG ER++++P +L+RFK
Sbjct: 157 LTSRYGCPGIEEIENFNRLYKQKLDEIIERGEIPLDLALEISSPGAERLLKVPGDLDRFK 216
Query: 61 DRAMYVKYVGETVTTGSPSESDGVFRLISFDMETECCTWGLADVRINREKAGKGRPLSKK 120
D AM V+Y+ E S + DG+F L S D++TE C W LADV N +AGKGRPL++K
Sbjct: 217 DMAMRVQYLAEGDGLVS-DQVDGIFMLESVDIQTEHCVWKLADV--NENRAGKGRPLNRK 273
Query: 121 QREWRLNTTFDSLRLVRLHSD 141
QR+WRL T+FD++R L+ D
Sbjct: 274 QRDWRLQTSFDAVRKATLYLD 294
>gi|357119389|ref|XP_003561424.1| PREDICTED: uncharacterized protein LOC100842923 [Brachypodium
distachyon]
Length = 290
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 67/141 (47%), Positives = 96/141 (68%), Gaps = 3/141 (2%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
++N+ G P +E+IE F Y+ +LDE IP + ++E+SSPG ER++++P +L+RFK
Sbjct: 153 LTNRYGCPGIEEIENFNRIYKQKLDEMIERGEIPLDLAVEISSPGAERLLKVPEDLDRFK 212
Query: 61 DRAMYVKYVGETVTTGSPSESDGVFRLISFDMETECCTWGLADVRINREKAGKGRPLSKK 120
D AM V+Y E S ++DG+F L S D++ E C W LA+V NR AGKGRPLS+K
Sbjct: 213 DMAMKVQYFAEGDDLVS-DQADGIFLLESVDIQAEHCVWKLANVTENR--AGKGRPLSRK 269
Query: 121 QREWRLNTTFDSLRLVRLHSD 141
QR+WRL T+F S+R V L+ D
Sbjct: 270 QRDWRLQTSFQSVRKVTLYLD 290
>gi|224112098|ref|XP_002316081.1| predicted protein [Populus trichocarpa]
gi|222865121|gb|EEF02252.1| predicted protein [Populus trichocarpa]
Length = 229
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 64/142 (45%), Positives = 93/142 (65%), Gaps = 5/142 (3%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
+S G PS+E++E++C YR RL+E IP N ++EVS+PG ER++++P +L RFK
Sbjct: 93 LSQPYGCPSIEELESYCQEYRKRLEEVGALGEIPNNLAVEVSTPGAERILKVPEDLSRFK 152
Query: 61 DRAMYVKYVGETVTTGSPSESDGVFRLISFDMETECCTWGLADVRINREKAGKGRPLSKK 120
D M V Y + G+ E++GVF L S +ME+E C W LADV+ NR+ KGRPL++K
Sbjct: 153 DMPMRVCY-----SEGNGPETNGVFFLESVEMESENCVWKLADVKENRDPESKGRPLNRK 207
Query: 121 QREWRLNTTFDSLRLVRLHSDC 142
+R+WRL F +V L+ DC
Sbjct: 208 RRDWRLTLPFKMHGMVSLYLDC 229
>gi|242047464|ref|XP_002461478.1| hypothetical protein SORBIDRAFT_02g003280 [Sorghum bicolor]
gi|241924855|gb|EER97999.1| hypothetical protein SORBIDRAFT_02g003280 [Sorghum bicolor]
Length = 321
Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 65/144 (45%), Positives = 97/144 (67%), Gaps = 3/144 (2%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
++N G P +E+IE F Y+ +LDE I + +LEVSSPG ER++++P +L+RFK
Sbjct: 176 LTNVYGCPDIEEIENFNRLYKQKLDEIIERGEISLDLALEVSSPGAERLLKVPEDLDRFK 235
Query: 61 DRAMYVKYVGE---TVTTGSPSESDGVFRLISFDMETECCTWGLADVRINREKAGKGRPL 117
D AM V+Y+ E + + DG+F L S D+++E C W LADV+ NR +AGKGRPL
Sbjct: 236 DMAMRVQYLAEGDNDLMSKQNLLKDGIFLLQSVDIQSEHCVWKLADVKENRAEAGKGRPL 295
Query: 118 SKKQREWRLNTTFDSLRLVRLHSD 141
++KQR+WRL T+F +++ V L+ D
Sbjct: 296 NRKQRDWRLQTSFTAVKKVTLYLD 319
>gi|356499905|ref|XP_003518776.1| PREDICTED: uncharacterized protein LOC100806065 [Glycine max]
Length = 279
Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 63/139 (45%), Positives = 93/139 (66%), Gaps = 2/139 (1%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
++++ G PSME++E + Y+ RLDE IP++ +LEVSSPG ER++++P ++ RFK
Sbjct: 141 LTHEYGCPSMEELECYNQKYKTRLDEVGALGEIPDDLALEVSSPGAERLLKVPDDISRFK 200
Query: 61 DRAMYVKYVGETVTTGSPSESDGVFRLISFDMETECCTWGLADVRINREKAGKGRPLSKK 120
D M V Y E + + P E DGVF L S + ++E C W LADV+ NR+ KGRPLS+K
Sbjct: 201 DLPMRVCYT-ENIESNCP-EKDGVFLLDSIENDSEMCVWKLADVKENRDPLKKGRPLSRK 258
Query: 121 QREWRLNTTFDSLRLVRLH 139
Q++WRL F+ R+V L+
Sbjct: 259 QKDWRLQLPFNLHRMVTLY 277
>gi|449434720|ref|XP_004135144.1| PREDICTED: uncharacterized protein LOC101211568 [Cucumis sativus]
Length = 315
Score = 128 bits (321), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 96/142 (67%), Gaps = 2/142 (1%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
+S++ G P++E+++++ Y+ RLDE +IP++ +LEVSSPG ER+++IP +L RFK
Sbjct: 176 LSHEFGCPNLEELDSYSKEYKKRLDETGALGNIPDDLALEVSSPGAERLLKIPDDLLRFK 235
Query: 61 DRAMYVKYVGETVTTGSPSESDGVFRLISFDMETECCTWGLADVRINREKAGKGRPLSKK 120
M V Y+ + + G SE+DGVF L ++E+E C W LA+VR NR+ KGRPL++K
Sbjct: 236 ATPMRVSYIEDVDSRG--SENDGVFMLDHLELESESCIWKLANVRENRDPLSKGRPLTRK 293
Query: 121 QREWRLNTTFDSLRLVRLHSDC 142
Q+EWRL + + + V L+ C
Sbjct: 294 QKEWRLKLPYANHKKVFLYLKC 315
>gi|449478348|ref|XP_004155292.1| PREDICTED: uncharacterized protein LOC101225208 [Cucumis sativus]
Length = 315
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 96/142 (67%), Gaps = 2/142 (1%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
+S++ G P++E+++++ Y+ RLDE +IP++ +LEVSSPG ER++++P +L RFK
Sbjct: 176 LSHEFGCPNLEELDSYSKEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLLRFK 235
Query: 61 DRAMYVKYVGETVTTGSPSESDGVFRLISFDMETECCTWGLADVRINREKAGKGRPLSKK 120
M V Y+ + + G SE+DGVF L ++E+E C W LA+VR NR+ KGRPL++K
Sbjct: 236 ATPMRVSYIEDVDSRG--SENDGVFMLDHLELESESCIWKLANVRENRDPLSKGRPLTRK 293
Query: 121 QREWRLNTTFDSLRLVRLHSDC 142
Q+EWRL + + + V L+ C
Sbjct: 294 QKEWRLKLPYANHKKVFLYLKC 315
>gi|226508874|ref|NP_001144098.1| uncharacterized protein LOC100276934 [Zea mays]
gi|195636892|gb|ACG37914.1| hypothetical protein [Zea mays]
Length = 164
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 95/145 (65%), Gaps = 3/145 (2%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
+++ G P +E+IE F Y+ +LDE I + +LEVSSPG ER++++P +L+RFK
Sbjct: 19 LTDVYGCPDIEEIEKFNRLYKQKLDEIVERGEISLDLALEVSSPGAERLLKVPEDLDRFK 78
Query: 61 DRAMYVKYVGETVTTGSPSES---DGVFRLISFDMETECCTWGLADVRINREKAGKGRPL 117
D AM V+Y+ E + + +S DG+F L S + E C W LADV+ NR +AGKGRPL
Sbjct: 79 DMAMRVQYLAEGNSDLASKQSLLKDGIFLLESVNAEAGHCVWRLADVKENRAEAGKGRPL 138
Query: 118 SKKQREWRLNTTFDSLRLVRLHSDC 142
++KQR+WRL T F +++ V L+ D
Sbjct: 139 NRKQRDWRLQTCFTAVKKVTLYLDA 163
>gi|414592053|tpg|DAA42624.1| TPA: hypothetical protein ZEAMMB73_835486 [Zea mays]
Length = 321
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 95/145 (65%), Gaps = 3/145 (2%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
+++ G P +E+IE F Y+ +LDE I + +LEVSSPG ER++++P +L+RFK
Sbjct: 176 LTDVYGCPDIEEIEKFNRLYKQKLDEIVERGEISLDLALEVSSPGAERLLKVPEDLDRFK 235
Query: 61 DRAMYVKYVGETVTTGSPSES---DGVFRLISFDMETECCTWGLADVRINREKAGKGRPL 117
D AM V+Y+ E + + +S DG+F L S + E C W LADV+ NR +AGKGRPL
Sbjct: 236 DMAMRVQYLAEGNSDLASKQSLLKDGIFLLESVNAEAGHCVWRLADVKENRAEAGKGRPL 295
Query: 118 SKKQREWRLNTTFDSLRLVRLHSDC 142
++KQR+WRL T F +++ V L+ D
Sbjct: 296 NRKQRDWRLQTCFTAVKKVTLYLDA 320
>gi|18409217|ref|NP_564954.1| uncharacterized protein [Arabidopsis thaliana]
gi|13937141|gb|AAK50064.1|AF372924_1 At1g69210/F4N2_11 [Arabidopsis thaliana]
gi|22137004|gb|AAM91347.1| At1g69210/F4N2_11 [Arabidopsis thaliana]
gi|332196773|gb|AEE34894.1| uncharacterized protein [Arabidopsis thaliana]
Length = 305
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/141 (45%), Positives = 90/141 (63%), Gaps = 2/141 (1%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
+S + G P+M+++E F ++ RLD+A K IPE+ +LEVSSPG ER++R+P +L RFK
Sbjct: 167 LSTEYGCPTMDELEEFSREFKKRLDDAGAEKVIPEDLALEVSSPGAERLLRVPEDLPRFK 226
Query: 61 DRAMYVKYVGETVTTGSPSESDGVFRLISFDMETECCTWGLADVRINREKAGKGRPLSKK 120
D M V YV E T + GVF L S D E++ C W LADVR NR+ KGRPLS+K
Sbjct: 227 DMPMTVSYVEE--TNSRKAVKSGVFLLESIDAESDNCVWKLADVRENRDPESKGRPLSRK 284
Query: 121 QREWRLNTTFDSLRLVRLHSD 141
Q++ R+ F + + L+ D
Sbjct: 285 QKDLRITLPFADHKKINLYLD 305
>gi|357487659|ref|XP_003614117.1| Ribosome maturation factor rimP [Medicago truncatula]
gi|355515452|gb|AES97075.1| Ribosome maturation factor rimP [Medicago truncatula]
Length = 282
Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 94/141 (66%), Gaps = 2/141 (1%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
++ K G PSME+++++ ++ RLDE IP++ LEVSSPG++R++++P +L RFK
Sbjct: 144 LTTKYGCPSMEELDSYNQEFKKRLDEVGALGEIPDDLGLEVSSPGLDRILKVPDDLNRFK 203
Query: 61 DRAMYVKYVGETVTTGSPSESDGVFRLISFDMETECCTWGLADVRINREKAGKGRPLSKK 120
+ M V Y E + + E DGVF L S ++++E C W LADV+ NR+ KG+PL++K
Sbjct: 204 EMPMRVCY-AENIESNC-REVDGVFLLDSIEIDSEVCVWKLADVKENRDATIKGKPLNRK 261
Query: 121 QREWRLNTTFDSLRLVRLHSD 141
Q++WRL F+ R+V ++ D
Sbjct: 262 QKDWRLRLPFNLHRMVTMYID 282
>gi|388510886|gb|AFK43509.1| unknown [Medicago truncatula]
Length = 282
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 92/141 (65%), Gaps = 2/141 (1%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
++ K G PSME+++++ ++ RLDE IP++ LEVSSPG++R++++P +L RFK
Sbjct: 144 LTTKYGCPSMEELDSYNQEFKKRLDEVGALGEIPDDLGLEVSSPGLDRILKVPDDLNRFK 203
Query: 61 DRAMYVKYVGETVTTGSPSESDGVFRLISFDMETECCTWGLADVRINREKAGKGRPLSKK 120
+ M V Y E + + E GVF L S ++++E C W LADV+ NR+ KG+PL++K
Sbjct: 204 EMPMRVCY-AENIESNC-REVGGVFLLDSIEIDSEVCVWKLADVKENRDATIKGKPLNRK 261
Query: 121 QREWRLNTTFDSLRLVRLHSD 141
Q++WRL F+ R+V + D
Sbjct: 262 QKDWRLRLPFNLHRMVTMCID 282
>gi|6730645|gb|AAF27066.1|AC008262_15 F4N2.17 [Arabidopsis thaliana]
Length = 1120
Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 89/150 (59%), Gaps = 11/150 (7%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVS---SP------GVERVVR 51
+S + G P+M+++E F ++ RLD+A K IPE+ +LEV SP G ER++R
Sbjct: 973 LSTEYGCPTMDELEEFSREFKKRLDDAGAEKVIPEDLALEVKKSLSPVNQLSLGAERLLR 1032
Query: 52 IPLELERFKDRAMYVKYVGETVTTGSPSESDGVFRLISFDMETECCTWGLADVRINREKA 111
+P +L RFKD M V YV ET + GVF L S D E++ C W LADVR NR+
Sbjct: 1033 VPEDLPRFKDMPMTVSYVEET--NSRKAVKSGVFLLESIDAESDNCVWKLADVRENRDPE 1090
Query: 112 GKGRPLSKKQREWRLNTTFDSLRLVRLHSD 141
KGRPLS+KQ++ R+ F + + L+ D
Sbjct: 1091 SKGRPLSRKQKDLRITLPFADHKKINLYLD 1120
>gi|297841651|ref|XP_002888707.1| hypothetical protein ARALYDRAFT_315930 [Arabidopsis lyrata subsp.
lyrata]
gi|297334548|gb|EFH64966.1| hypothetical protein ARALYDRAFT_315930 [Arabidopsis lyrata subsp.
lyrata]
Length = 1151
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 88/170 (51%), Gaps = 31/170 (18%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEV------------------- 41
+SN+ G P+M+ +E F ++ RLD+A K IPE+ +LEV
Sbjct: 984 LSNEYGCPTMDKLEEFSREFKKRLDDAGAEKVIPEDLALEVKRVFLHESTTTQGQFVLNL 1043
Query: 42 ----------SSPGVERVVRIPLELERFKDRAMYVKYVGETVTTGSPSESDGVFRLISFD 91
SSPG ER++R+P +L RFK+ M V YV +T VF L S D
Sbjct: 1044 VSVLFFSVKVSSPGAERLLRVPEDLPRFKEMPMTVSYVEKT--NSRKVVKTAVFLLESID 1101
Query: 92 METECCTWGLADVRINREKAGKGRPLSKKQREWRLNTTFDSLRLVRLHSD 141
E++ C W LADV+ NR+ KGRPLS+KQ++ R+ F + + L+ D
Sbjct: 1102 AESDNCVWKLADVKENRDPESKGRPLSRKQKDLRITLPFTDHKKINLYLD 1151
>gi|414881579|tpg|DAA58710.1| TPA: putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 677
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 58/77 (75%)
Query: 66 VKYVGETVTTGSPSESDGVFRLISFDMETECCTWGLADVRINREKAGKGRPLSKKQREWR 125
V+Y + +P E DGV LI +DM+ CTWG+ DV+INR+++ KG+PLSKKQREWR
Sbjct: 601 VRYTTTSDEATTPQEGDGVLTLIYYDMDLRECTWGIVDVKINRQQSSKGKPLSKKQREWR 660
Query: 126 LNTTFDSLRLVRLHSDC 142
L T F+SL+LVRL+S+C
Sbjct: 661 LQTAFESLKLVRLYSEC 677
>gi|255078408|ref|XP_002502784.1| predicted protein [Micromonas sp. RCC299]
gi|226518050|gb|ACO64042.1| predicted protein [Micromonas sp. RCC299]
Length = 298
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 78/139 (56%), Gaps = 5/139 (3%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
+++K GSP+++ + A TY L+E K P++ +LEV+SPG ER +R+PLELERF+
Sbjct: 162 VNDKFGSPTLDQLGAVSRTYNTVLEE----KGFPDDVALEVASPGAERQLRLPLELERFR 217
Query: 61 DRAMYVKYVGETVTTGSPSESDGVFRLISFDMETECCTWGLADVRINREKAGKGRPLSKK 120
D M V Y G+ V + D E T+ LADV NR +A KG+ ++KK
Sbjct: 218 DLTMKVTYAARAEEDGAEGTRTKVLDVEDID-EDGSPTFKLADVEENRPQAKKGQGMNKK 276
Query: 121 QREWRLNTTFDSLRLVRLH 139
QR+WRL + L+
Sbjct: 277 QRDWRLKLDVGDISKANLY 295
>gi|384245395|gb|EIE18889.1| hypothetical protein COCSUDRAFT_45036 [Coccomyxa subellipsoidea
C-169]
Length = 294
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 73/139 (52%), Gaps = 6/139 (4%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
M + GSP+++D+ F + + LD A + + S+EVSSPG ER+VR+P ELERF
Sbjct: 159 MDDLYGSPTLDDVALFSSKFSQALD-ARLGEEAAGKLSVEVSSPGAERIVRVPRELERFG 217
Query: 61 DRAMYVKYVGETVTTGSPSESDGVFRLISFDMETECCTWGLADVRINREKAGKGRPLSKK 120
M V Y+ E GS V L D + WGLADV+ NR K LSK+
Sbjct: 218 SLPMQVTYLKE---PGSTETDTKVLSLKELDEQQGTSRWGLADVKANRRKG--VMKLSKR 272
Query: 121 QREWRLNTTFDSLRLVRLH 139
+ + SL+L++LH
Sbjct: 273 EAGISFDLPISSLQLIKLH 291
>gi|145352954|ref|XP_001420798.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581033|gb|ABO99091.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 189
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 79/143 (55%), Gaps = 9/143 (6%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
+++K GSP+++++ + A LDE + PE+ ++E++SPG R +R+P ELERF+
Sbjct: 55 LNDKYGSPTLDELTTIVRAHNAILDE----RGFPEDVAVELASPGAMRSLRVPRELERFR 110
Query: 61 DRAMYVKYVGETVTTGSPSESDGVFRLISF-DMETECCTWGLADVRINREKAGKGRPLSK 119
D M V Y E + +P + V + + D+ W LADV NR A KG+ ++K
Sbjct: 111 DLVMDVTY-KEAIE--NPESTSNVTKTMEVTDISDTEVEWKLADVPANR-PAKKGQGMNK 166
Query: 120 KQREWRLNTTFDSLRLVRLHSDC 142
K REWRL D++ L D
Sbjct: 167 KSREWRLRMPLDAVVRANLFIDI 189
>gi|302830199|ref|XP_002946666.1| hypothetical protein VOLCADRAFT_116086 [Volvox carteri f.
nagariensis]
gi|300268412|gb|EFJ52593.1| hypothetical protein VOLCADRAFT_116086 [Volvox carteri f.
nagariensis]
Length = 438
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 59/116 (50%), Gaps = 8/116 (6%)
Query: 6 GSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDRAMY 65
GSPS++DIE F A L E E+ S EVSSPG ER+VR+P EL RF + +
Sbjct: 300 GSPSIDDIERFQRGLLAAL-EREMGPEAAGEISFEVSSPGAERLVRVPEELPRFAELPLQ 358
Query: 66 VKYVGETVTTGSPSESDGVFRLISFDMETECCTWGLADVRINREKAGKGRPLSKKQ 121
V+Y T E V L D +W LA+VR N KGR LSKKQ
Sbjct: 359 VEY-----RTPDGKEVSAVLLLAGLDPSGSTSSWRLANVRAN--ATVKGRALSKKQ 407
>gi|303283206|ref|XP_003060894.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457245|gb|EEH54544.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 332
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 72/126 (57%), Gaps = 6/126 (4%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
+ +K GSP+++ + + A L+E ++ PE+ +LEV+SPG ER +R+P +L RF+
Sbjct: 197 VKDKFGSPTLDQLGEVSRKFNALLEE----ENFPEDVALEVASPGAERALRLPDDLPRFR 252
Query: 61 DRAMYVKYVGETVTTGSPSESDGVFRLISFDMETECCTWGLADVRINREKAGKGRPLSKK 120
+ M V Y G+ + D++ + + LADV NR +A KG+ ++KK
Sbjct: 253 NLTMKVTYAAAAEDDGAEGTR--TRVMDVVDVDGDAVEFKLADVPENRPQAKKGQGMNKK 310
Query: 121 QREWRL 126
QREWRL
Sbjct: 311 QREWRL 316
>gi|424513387|emb|CCO66009.1| predicted protein [Bathycoccus prasinos]
Length = 387
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 65/118 (55%), Gaps = 7/118 (5%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
+ ++ GSP+++D+ A +L+E +K P++ ++EV+SPG ER + IP +L RF+
Sbjct: 251 LDDQYGSPNLDDLIAVSR----KLNELAESKGFPDDVAIEVASPGAERKLTIPEDLLRFR 306
Query: 61 DRAMYVKYVGETVTTGSPSESDGVFRLISFDMETECCTWGLADVRINREKAGKGRPLS 118
+ M V Y + +P + + F+ E+ + LADV+ NR KG P+S
Sbjct: 307 ELKMKVIYNDD--ENDNPENETMILNVEDFEEESGLVVFRLADVQENR-PPKKGMPMS 361
>gi|159474558|ref|XP_001695392.1| predicted protein [Chlamydomonas reinhardtii]
gi|158275875|gb|EDP01650.1| predicted protein [Chlamydomonas reinhardtii]
Length = 253
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
Query: 38 SLEVSSPGVERVVRIPLELERFKDRAMYVKYVGETVTTGSPSESDGVFRLISFDMETECC 97
S EVSSPG ER+VR+P EL RF+ + V+Y T ++ V L D
Sbjct: 156 SFEVSSPGAERLVRVPDELRRFETLPLKVEY-----RTPEGKDASAVLLLAELDEAAGTS 210
Query: 98 TWGLADVRINREKAGKGRPLSKKQREWRLNTTFDSLRLVRLHSD 141
W LA+ R N KGR LSK+Q L + VR+H D
Sbjct: 211 AWRLANCRAN--ATVKGRALSKRQLSQVLALPLADIIRVRIHVD 252
>gi|392404158|ref|YP_006440770.1| Ribosome maturation factor rimP [Turneriella parva DSM 21527]
gi|390612112|gb|AFM13264.1| Ribosome maturation factor rimP [Turneriella parva DSM 21527]
Length = 176
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 68/142 (47%), Gaps = 15/142 (10%)
Query: 2 SNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKD 61
S+ GS ++ D E + R LDE E A I N SLEV+S G ER ++ E++RF
Sbjct: 47 SDPHGSVNIRDCETYARALRDALDEMEKASGINLNYSLEVASAGAERELKSLAEVKRFSA 106
Query: 62 RAMYVKYVGETVTTGSPSESDGVFRLISFDMETECCTWGLADVRINREK--AGKGRPLSK 119
+ V +V ET T S L + +E E T+ +AD + NR+K K + L
Sbjct: 107 LPVNVTFVAETGKTLSEI-------LKTEQIEGEYVTFNVADCKANRKKYTPKKLKSLPT 159
Query: 120 KQREWRLNTTFDSLRLVRLHSD 141
+ W ++ +RLH D
Sbjct: 160 HRVAWH------DIKKIRLHLD 175
>gi|374587727|ref|ZP_09660819.1| Ribosome maturation factor rimP [Leptonema illini DSM 21528]
gi|373876588|gb|EHQ08582.1| Ribosome maturation factor rimP [Leptonema illini DSM 21528]
Length = 172
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIP-----ENTSLEVSSPGVERVVRIPLE 55
+ + SGS S+++ E F + LD+A + +P EN SLEVSS G ER +RIP E
Sbjct: 41 LKDPSGSVSLDECERFSKAFIELLDQAIGQEGLPDDLDAENYSLEVSSAGAERELRIPAE 100
Query: 56 LERFKDRAMYVKY 68
ERF+ R + ++Y
Sbjct: 101 FERFRGRPLKIRY 113
>gi|218188575|gb|EEC71002.1| hypothetical protein OsI_02674 [Oryza sativa Indica Group]
Length = 106
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 38 SLEVSSPGVERVVRIPLELERFKDRAMYVKYV--GETVTTGSPSESDGVFRLISFDMETE 95
+L VSSPG ER++ +P +L+RFKD A+ V+Y+ G+ + +G+F L S D++ E
Sbjct: 12 NLLVSSPGAERLLEVPEDLDRFKDMAIRVQYLVEGDDLVLKQILRKNGIFLLKSVDIQAE 71
Query: 96 CCT 98
C
Sbjct: 72 HCI 74
>gi|20521302|dbj|BAB91816.1| hypothetical protein [Oryza sativa Japonica Group]
gi|20804622|dbj|BAB92312.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 165
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 38 SLEVSSPGVERVVRIPLELERFKDRAMYVKYV--GETVTTGSPSESDGVFRLISFDMETE 95
S VSSPG ER++ +P +L+RFKD A+ V+Y+ G+ + +G+F L S D++ E
Sbjct: 71 SQAVSSPGAERLLEVPEDLDRFKDMAIRVQYLVEGDDLVLKQILRKNGIFLLKSVDIQAE 130
Query: 96 CC 97
C
Sbjct: 131 HC 132
>gi|260881110|ref|ZP_05403661.2| hypothetical protein MITSMUL_03619 [Mitsuokella multacida DSM
20544]
gi|260849563|gb|EEX69570.1| hypothetical protein MITSMUL_03619 [Mitsuokella multacida DSM
20544]
Length = 211
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 9/109 (8%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK-- 60
+K G +ED +A LD+ ++ +P++ LEVSSPG++RV+R P + R +
Sbjct: 105 DKEGGIDIEDCQALSEKLEEALDKGDV---VPDSYILEVSSPGIDRVLRKPRDFTREQGK 161
Query: 61 --DRAMYVKYVGETVTTGSPSESDGVFRLISFDMETECCTWGLADVRIN 107
D +Y G+ + G + DG I D ET+ +A VR++
Sbjct: 162 KVDVTLYAPREGKKLVVGELTGFDG--DAIELDGETKIPLADIAQVRLH 208
>gi|401564640|ref|ZP_10805518.1| hypothetical protein HMPREF1148_1640 [Selenomonas sp. FOBRC6]
gi|400188637|gb|EJO22788.1| hypothetical protein HMPREF1148_1640 [Selenomonas sp. FOBRC6]
Length = 149
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 58/109 (53%), Gaps = 9/109 (8%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK-- 60
+K G ++D +A A LD + IP++ LEVSSPG++RV+R P + ER +
Sbjct: 43 DKEGGIDIDDCQALSERLEAILDREDF---IPDSYILEVSSPGIDRVLRKPRDFERERGK 99
Query: 61 --DRAMYVKYVGETVTTGSPSESDGVFRLISFDMETECCTWGLADVRIN 107
D +Y + G+ TG+ + DG ++++ D + ++ +R++
Sbjct: 100 QVDVTLYAPFDGKKQWTGALMDCDG--KMLTLDDGVQIPMEQVSQIRLH 146
>gi|317133696|ref|YP_004093010.1| hypothetical protein Ethha_2787 [Ethanoligenens harbinense YUAN-3]
gi|315471675|gb|ADU28279.1| protein of unknown function DUF150 [Ethanoligenens harbinense
YUAN-3]
Length = 165
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDR 62
+K G +ED EAF LDEA++ IP+ LEVSSPG+ER ++ + F +
Sbjct: 45 DKDGGVGIEDCEAFSRAIDGPLDEADL---IPQQYYLEVSSPGIERELKRDAHFQAFIGK 101
Query: 63 AMYVKYV 69
++V+ +
Sbjct: 102 KVHVRLI 108
>gi|333979928|ref|YP_004517873.1| Ribosome maturation factor rimP [Desulfotomaculum kuznetsovii DSM
6115]
gi|333823409|gb|AEG16072.1| Ribosome maturation factor rimP [Desulfotomaculum kuznetsovii DSM
6115]
Length = 155
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERF 59
+K G +++D +A + LDEA+ IP + LEVSSPG+ER ++ P + ERF
Sbjct: 44 DKPGGVTLDDCQAVSESLDPLLDEAD---PIPHSYHLEVSSPGIERPLKKPADFERF 97
>gi|422344878|ref|ZP_16425802.1| hypothetical protein HMPREF9432_01862 [Selenomonas noxia F0398]
gi|355376332|gb|EHG23586.1| hypothetical protein HMPREF9432_01862 [Selenomonas noxia F0398]
Length = 149
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDR 62
+K G +ED +A LD + +P+ LEVSSPG++RV+R P + ER + +
Sbjct: 43 DKEGGIDIEDCQALSERLEEMLDREDF---VPDAYILEVSSPGLDRVLRKPRDFEREQGK 99
Query: 63 A----MYVKYVGETVTTGSPSESDG 83
A +Y + G+ TG+ + DG
Sbjct: 100 AVDVTLYAPFEGKKQWTGTLAGYDG 124
>gi|86157526|ref|YP_464311.1| hypothetical protein Adeh_1099 [Anaeromyxobacter dehalogenans
2CP-C]
gi|123499926|sp|Q2IPZ0.1|RIMP_ANADE RecName: Full=Ribosome maturation factor RimP
gi|85774037|gb|ABC80874.1| hypothetical protein Adeh_1099 [Anaeromyxobacter dehalogenans
2CP-C]
Length = 171
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDR 62
+K+G ++D +A T LD +A I LEVSSPG++R +R P + +R+ +
Sbjct: 47 DKAGGVGIDDCQAVSKTVEPILD---VADFIEPAYDLEVSSPGLDRPLRKPRDFDRYAGQ 103
Query: 63 AMYVKYVGETVTT--GSPS 79
++VK G T GSP+
Sbjct: 104 RVHVKAYGPVAGTAPGSPA 122
>gi|383754447|ref|YP_005433350.1| hypothetical protein SELR_16190 [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381366499|dbj|BAL83327.1| hypothetical protein SELR_16190 [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 151
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDR 62
+K G +ED + LDE +I IP+ LEVSSPG++RV+R P +L R + +
Sbjct: 45 DKEGGIDIEDCQELSEKLEVILDEQDI---IPDAYILEVSSPGIDRVLRKPRDLVREQGK 101
Query: 63 A----MYVKYVGETVTTGSPSESDG 83
A +Y G+ TG + DG
Sbjct: 102 AVDVTLYAPLDGKKNLTGVLTAFDG 126
>gi|197121570|ref|YP_002133521.1| hypothetical protein AnaeK_1159 [Anaeromyxobacter sp. K]
gi|259585696|sp|B4UHF7.1|RIMP_ANASK RecName: Full=Ribosome maturation factor RimP
gi|196171419|gb|ACG72392.1| protein of unknown function DUF150 [Anaeromyxobacter sp. K]
Length = 171
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDR 62
+K+G ++D +A T LD A++ I LEVSSPG++R +R P + +R+ +
Sbjct: 47 DKAGGVGIDDCQAVSKTVEPILDVADV---IEPAYDLEVSSPGLDRPLRKPRDFDRYAGQ 103
Query: 63 AMYVKYVGETVTT--GSPS 79
++VK G T G+P+
Sbjct: 104 RVHVKAYGPVAGTAPGAPA 122
>gi|292669519|ref|ZP_06602945.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
gi|292648842|gb|EFF66814.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
Length = 163
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDR 62
+K G +ED + LD + IP+ LEVSSPG++RV+R P + ER + +
Sbjct: 57 DKEGGIDIEDCQGLSERLEEMLDREDF---IPDAYILEVSSPGLDRVLRKPRDFEREQGK 113
Query: 63 A----MYVKYVGETVTTGSPSESDG 83
A +Y + G+ TG+ + DG
Sbjct: 114 AVDVTLYAPFEGKKQWTGTLAGYDG 138
>gi|220916333|ref|YP_002491637.1| hypothetical protein A2cp1_1227 [Anaeromyxobacter dehalogenans
2CP-1]
gi|259585694|sp|B8JFY3.1|RIMP_ANAD2 RecName: Full=Ribosome maturation factor RimP
gi|219954187|gb|ACL64571.1| protein of unknown function DUF150 [Anaeromyxobacter dehalogenans
2CP-1]
Length = 171
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDR 62
+K+G ++D +A T LD A++ I LEVSSPG++R +R P + +R+ +
Sbjct: 47 DKAGGVGIDDCQAVSKTVEPILDVADV---IEPAYDLEVSSPGLDRPLRKPGDFDRYAGQ 103
Query: 63 AMYVKYVGETVTT--GSPS 79
++VK G T G+P+
Sbjct: 104 RVHVKAYGPVAGTAPGAPA 122
>gi|405983621|ref|ZP_11041926.1| hypothetical protein HMPREF9451_01029 [Slackia piriformis YIT
12062]
gi|404388436|gb|EJZ83518.1| hypothetical protein HMPREF9451_01029 [Slackia piriformis YIT
12062]
Length = 157
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 43/95 (45%), Gaps = 12/95 (12%)
Query: 9 SMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDRAMYVKY 68
+ EDI A +DE + P +LEVSSPG++R +R P +RF +Y
Sbjct: 49 AFEDITAAQVWVNEIMDEID---PFPGAYTLEVSSPGIDRPLRTPEHFDRFAGEEVY--- 102
Query: 69 VGETVTTGSPSESDGVF--RLISFDMETECCTWGL 101
VTT SP + F RL+ FD + L
Sbjct: 103 ----VTTASPIDGRSRFNARLVGFDFGSNAVKLEL 133
>gi|320354997|ref|YP_004196336.1| hypothetical protein Despr_2912 [Desulfobulbus propionicus DSM
2032]
gi|320123499|gb|ADW19045.1| protein of unknown function DUF150 [Desulfobulbus propionicus DSM
2032]
Length = 153
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 54/117 (46%), Gaps = 16/117 (13%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDR 62
+K G +++D A L E+ I LEVSSPG+ER +R + RF DR
Sbjct: 46 DKEGGITIDDCADVSREISAYL---EVEDLIDHAYHLEVSSPGLERPLRKKEDFHRFIDR 102
Query: 63 AMYVKY---VGET-VTTGSPSESDGVFRLISFDMETECCTWGLADVRINREKAGKGR 115
+ VK +GE V TG+ +G L++ D ET VRI+ E K R
Sbjct: 103 LIRVKLREPLGEQKVLTGTLLGMEGDTVLLALDSET---------VRIDWENISKAR 150
>gi|334128536|ref|ZP_08502424.1| protein of hypothetical function DUF150 [Centipeda periodontii DSM
2778]
gi|333387213|gb|EGK58416.1| protein of hypothetical function DUF150 [Centipeda periodontii DSM
2778]
Length = 180
Score = 41.6 bits (96), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEA-EIAKSIPENTSLEVSSPGVERVVRIPLELERFK- 60
+K+G ++D C RL+E + IP+ LEVSSPG++RV+R P + ER
Sbjct: 74 DKAGGIDIDD----CQNLSERLEEILDREDFIPDAYILEVSSPGLDRVLRKPRDFEREHG 129
Query: 61 ---DRAMYVKYVGETVTTGSPSESDG 83
D +Y + G+ TG+ + DG
Sbjct: 130 KQVDVTLYAPFDGKKQWTGALAGCDG 155
>gi|429735743|ref|ZP_19269674.1| hypothetical protein HMPREF9163_00518 [Selenomonas sp. oral taxon
138 str. F0429]
gi|429157091|gb|EKX99698.1| hypothetical protein HMPREF9163_00518 [Selenomonas sp. oral taxon
138 str. F0429]
Length = 163
Score = 41.6 bits (96), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 6/79 (7%)
Query: 33 IPENTSLEVSSPGVERVVRIPLELERFK----DRAMYVKYVGETVTTGSPSESDGVFRLI 88
IP+ LEVSSPG++RV+R P + ER + D +Y + G+ TG+ ++ DG +++
Sbjct: 84 IPDAYILEVSSPGIDRVLRKPRDFERERGKQVDVMLYAPFDGKKQWTGALTDCDG--KIL 141
Query: 89 SFDMETECCTWGLADVRIN 107
+ D + ++ +R++
Sbjct: 142 TIDGGIQIPMEQVSQIRLH 160
>gi|335040867|ref|ZP_08533988.1| Ribosome maturation factor rimP [Caldalkalibacillus thermarum
TA2.A1]
gi|334179302|gb|EGL81946.1| Ribosome maturation factor rimP [Caldalkalibacillus thermarum
TA2.A1]
Length = 156
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 45/93 (48%), Gaps = 12/93 (12%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDR 62
+K G +ED A + A+LDE + I + LEVSSPG ER ++ ++ R +
Sbjct: 43 DKPGGVDIEDCSAVSESLSAKLDEVD---PIDQAYFLEVSSPGAERPLKNEEDIRRAVGK 99
Query: 63 AMYVKYVGETVTTGSPSESDGVF--RLISFDME 93
+Y VTT P E F RLI FD E
Sbjct: 100 FIY-------VTTYEPVEGQKAFEGRLIQFDGE 125
>gi|260893512|ref|YP_003239609.1| hypothetical protein Adeg_1666 [Ammonifex degensii KC4]
gi|260865653|gb|ACX52759.1| protein of unknown function DUF150 [Ammonifex degensii KC4]
Length = 161
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDR 62
+K +++D EA LD + IP + SLEVSSPGVER ++ P +RF R
Sbjct: 45 DKPSGVTLDDCEALSEALGEALD---VEDPIPHSYSLEVSSPGVERPLKKPAHFQRFVGR 101
Query: 63 AMYV 66
+ V
Sbjct: 102 EVRV 105
>gi|334340460|ref|YP_004545440.1| hypothetical protein [Desulfotomaculum ruminis DSM 2154]
gi|334091814|gb|AEG60154.1| protein of unknown function DUF150 [Desulfotomaculum ruminis DSM
2154]
Length = 153
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDR 62
+K G ++D + LDE + IP+ LEVSSPG+ER ++ P + ERFK
Sbjct: 44 DKLGGVDLDDCQMVSEKIDTLLDELD---PIPQAYFLEVSSPGIERPLKKPADFERFKGH 100
Query: 63 AMYV 66
+ V
Sbjct: 101 LIMV 104
>gi|338533264|ref|YP_004666598.1| ribosome maturation factor rimP [Myxococcus fulvus HW-1]
gi|337259360|gb|AEI65520.1| Ribosome maturation factor rimP [Myxococcus fulvus HW-1]
Length = 161
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 17 CTTYRARLDEA-EIAKSIPENTSLEVSSPGVERVVRIPLELERFKDRAMYVKYVG 70
CT +D + ++ IP SLEVSSPGV+R +R P ER K + + VK G
Sbjct: 59 CTQVSRAVDPSLDVEDFIPHEYSLEVSSPGVDRPLRKPAHFERVKGQKVKVKTFG 113
>gi|153004005|ref|YP_001378330.1| hypothetical protein Anae109_1138 [Anaeromyxobacter sp. Fw109-5]
gi|259585695|sp|A7H9F0.1|RIMP_ANADF RecName: Full=Ribosome maturation factor RimP
gi|152027578|gb|ABS25346.1| protein of unknown function DUF150 [Anaeromyxobacter sp. Fw109-5]
Length = 171
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDR 62
+K G +ED +A LD + I LEVSSPG++R +R P + +R+ +
Sbjct: 47 DKPGGVGIEDCQAVSRLVDPILD---VEDFIEPAYDLEVSSPGLDRPLRKPADFDRYAGQ 103
Query: 63 AMYVKYVGETVTT--GSPSESDGVFRLISF 90
+VK G T GSP+ + L+ +
Sbjct: 104 RAHVKAYGPVAGTAPGSPARKNWTGVLVGY 133
>gi|405375806|ref|ZP_11029826.1| transcription termination protein [Chondromyces apiculatus DSM 436]
gi|397085887|gb|EJJ17051.1| transcription termination protein [Myxococcus sp. (contaminant ex
DSM 436)]
Length = 161
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 25/38 (65%)
Query: 33 IPENTSLEVSSPGVERVVRIPLELERFKDRAMYVKYVG 70
IP SLEVSSPGV+R +R P+ ER K + + VK G
Sbjct: 76 IPHEYSLEVSSPGVDRPLRKPVHFERVKGQKVKVKTFG 113
>gi|373455627|ref|ZP_09547456.1| hypothetical protein HMPREF9453_01625 [Dialister succinatiphilus
YIT 11850]
gi|371934720|gb|EHO62500.1| hypothetical protein HMPREF9453_01625 [Dialister succinatiphilus
YIT 11850]
Length = 156
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 12/71 (16%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDR 62
+K G + D + LDEA++ IP+N LEVSSPG++RV++ KD+
Sbjct: 43 DKEGGVDLNDCQTVSEKAGMLLDEADL---IPDNYMLEVSSPGLDRVLK--------KDK 91
Query: 63 AMYVKYVGETV 73
+++Y GE V
Sbjct: 92 D-FIRYTGEDV 101
>gi|317057641|ref|YP_004106108.1| hypothetical protein Rumal_3009 [Ruminococcus albus 7]
gi|315449910|gb|ADU23474.1| protein of unknown function DUF150 [Ruminococcus albus 7]
Length = 181
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELE 57
+ +K G +MED E F + LDEA+ IP++ E SPG+ R +R P+ E
Sbjct: 49 LIDKDGGVTMEDCENFTRPFNKILDEAD---PIPQSYVFECGSPGLGRELRKPIHFE 102
>gi|348026642|ref|YP_004766447.1| ribosome maturation factor rimP [Megasphaera elsdenii DSM 20460]
gi|341822696|emb|CCC73620.1| ribosome maturation factor rimP [Megasphaera elsdenii DSM 20460]
Length = 153
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 12/82 (14%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDR 62
+K G +ED +A LDE + I +N LEVSSPG++R+++ KD+
Sbjct: 43 DKEGGVDLEDCQAVSEKLSKVLDEKD---PISDNYLLEVSSPGLDRILK--------KDK 91
Query: 63 AMYVKYVGETVTTGSPSESDGV 84
+V+Y G +V DGV
Sbjct: 92 D-FVRYAGRSVDIHFFKAHDGV 112
>gi|430750273|ref|YP_007213181.1| hypothetical protein Theco_2061 [Thermobacillus composti KWC4]
gi|430734238|gb|AGA58183.1| hypothetical protein Theco_2061 [Thermobacillus composti KWC4]
Length = 156
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 12/102 (11%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
++K G ++D ARLDE + IPE LEVSSPG ER ++ P ++ +
Sbjct: 44 FADKEGGIDIDDCGRISEWLSARLDELD---PIPEAYFLEVSSPGAERPLKKPEDMAKAV 100
Query: 61 DRAMYVKYVGETVTTGSPSESDGVF--RLISFDMETECCTWG 100
R ++ VTT P + F RL+SF+ T G
Sbjct: 101 GRHVF-------VTTYEPIDGMKEFEGRLVSFEDGTAVVEIG 135
>gi|108761060|ref|YP_630294.1| hypothetical protein MXAN_2065 [Myxococcus xanthus DK 1622]
gi|122389560|sp|Q1DAM9.1|RIMP_MYXXD RecName: Full=Ribosome maturation factor RimP
gi|108464940|gb|ABF90125.1| conserved hypothetical protein [Myxococcus xanthus DK 1622]
Length = 161
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 17 CTTYRARLDEA-EIAKSIPENTSLEVSSPGVERVVRIPLELERFKDRAMYVKYVG 70
CT +D + ++ IP +LEVSSPGV+R +R P ER K + + VK G
Sbjct: 59 CTQVSRAVDPSLDVEDFIPHEYNLEVSSPGVDRPLRKPTHFERVKGQQVKVKTFG 113
>gi|257063652|ref|YP_003143324.1| hypothetical protein Shel_09340 [Slackia heliotrinireducens DSM
20476]
gi|256791305|gb|ACV21975.1| uncharacterized conserved protein [Slackia heliotrinireducens DSM
20476]
Length = 158
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 9/71 (12%)
Query: 33 IPENTSLEVSSPGVERVVRIPLELERFKDRAMYVKYVGETVTTGSPSESDGVF--RLISF 90
P +LEVSSPG++R +R P RF +Y V T P + F +L F
Sbjct: 70 FPGAYTLEVSSPGIDRPLRTPEHFARFAGEDVY-------VMTAKPFDGQSRFNAQLNGF 122
Query: 91 DMETECCTWGL 101
D E+ C GL
Sbjct: 123 DEESGCVLIGL 133
>gi|408794218|ref|ZP_11205823.1| hypothetical protein LEP1GSC017_3267 [Leptospira meyeri serovar
Hardjo str. Went 5]
gi|408461453|gb|EKJ85183.1| hypothetical protein LEP1GSC017_3267 [Leptospira meyeri serovar
Hardjo str. Went 5]
Length = 169
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
+++K+GS S+ED C T RL E + +L+VSS G ERV+R+P +L RF+
Sbjct: 50 LTDKTGSASLED----CETVSRRLKEELDLWGEEFDFTLQVSSAGAERVLRLPEDLSRFQ 105
>gi|303256974|ref|ZP_07342988.1| DUF150-containing protein [Burkholderiales bacterium 1_1_47]
gi|330999162|ref|ZP_08322881.1| hypothetical protein HMPREF9439_00503 [Parasutterella
excrementihominis YIT 11859]
gi|302860465|gb|EFL83542.1| DUF150-containing protein [Burkholderiales bacterium 1_1_47]
gi|329575362|gb|EGG56906.1| hypothetical protein HMPREF9439_00503 [Parasutterella
excrementihominis YIT 11859]
Length = 186
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 9/124 (7%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDR 62
+K G +++D C +L+ A +++ + LEVSSPGV+R ++ P + +F +
Sbjct: 38 DKDGGITLDD----CEKVSNQLNNAMTVENV-DYDRLEVSSPGVDRPLKRPRDFVKFVGQ 92
Query: 63 AMYVKYVGETVTTGSPSES----DGVFRLISFDMETECCTWGLADVRINREKAGKGRPLS 118
++V+ G P DG + D T L++ R+ R A K R
Sbjct: 93 NVHVELFAPITGEGLPENGRRRLDGTLDAVEGDENNPSITMTLSENRVARTPAEKQRAAK 152
Query: 119 KKQR 122
K +
Sbjct: 153 TKAK 156
>gi|186494075|ref|NP_001117572.1| uncharacterized protein [Arabidopsis thaliana]
gi|332196774|gb|AEE34895.1| uncharacterized protein [Arabidopsis thaliana]
Length = 235
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEV 41
+S + G P+M+++E F ++ RLD+A K IPE+ +LEV
Sbjct: 167 LSTEYGCPTMDELEEFSREFKKRLDDAGAEKVIPEDLALEV 207
>gi|451945665|ref|YP_007466260.1| hypothetical protein UWK_00018 [Desulfocapsa sulfexigens DSM 10523]
gi|451905013|gb|AGF76607.1| hypothetical protein UWK_00018 [Desulfocapsa sulfexigens DSM 10523]
Length = 151
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 28 EIAKSIPENTSLEVSSPGVERVVRIPLELERFKDRAMYVKYV----GETVTTGSPSESDG 83
++ +P + +LEVSSPG+ER +R + ERFK + V+ G+ V G ESD
Sbjct: 65 DVEDLVPHSFTLEVSSPGLERPLRSAADFERFKGKKARVRLRHPLDGQKVFVGLIGESDE 124
Query: 84 V-FRLISFDMET 94
+ F L+ D ET
Sbjct: 125 LGFDLLVEDGET 136
>gi|440748962|ref|ZP_20928212.1| transcription termination protein NusA [Mariniradius
saccharolyticus AK6]
gi|436482664|gb|ELP38762.1| transcription termination protein NusA [Mariniradius
saccharolyticus AK6]
Length = 156
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 54/122 (44%), Gaps = 22/122 (18%)
Query: 13 IEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDRAMYVKYVGET 72
I+A RA DE E +PE LEVSSPG++ PL R Y+K VG
Sbjct: 48 IDACARVSRAVGDEIEAKDLMPEAFVLEVSSPGLDH----PLS-----SRRQYLKNVGRK 98
Query: 73 VTTGSPSESDGVFRLISFDMETECCTWGLADVRINREKAGKGRPLSKKQREWRLNTTFDS 132
+ S SDG D+E + G D++I + KG KK +E L F+
Sbjct: 99 LKV---SLSDG------KDIEGQLSEVGSTDIKILTKVKEKG----KKAQEVILAIPFEQ 145
Query: 133 LR 134
++
Sbjct: 146 IK 147
>gi|183220910|ref|YP_001838906.1| hypothetical protein LEPBI_I1523 [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
gi|189911006|ref|YP_001962561.1| hypothetical protein LBF_1470 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|226734181|sp|B0SH16.1|RIMP_LEPBA RecName: Full=Ribosome maturation factor RimP
gi|226734677|sp|B0SQH2.1|RIMP_LEPBP RecName: Full=Ribosome maturation factor RimP
gi|167775682|gb|ABZ93983.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167779332|gb|ABZ97630.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 162
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
+++K+GS S+ED C T RL E + +L+VSS G ERV+R+P +L RF+
Sbjct: 43 LTDKTGSASLED----CETVSRRLKEELDQWGEEFDFTLQVSSAGAERVLRLPEDLIRFQ 98
>gi|427392500|ref|ZP_18886505.1| hypothetical protein HMPREF9698_00311 [Alloiococcus otitis ATCC
51267]
gi|425731461|gb|EKU94279.1| hypothetical protein HMPREF9698_00311 [Alloiococcus otitis ATCC
51267]
Length = 156
Score = 38.5 bits (88), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 10/117 (8%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDR 62
+++G S++D F LD+ E IP+ LEVSSPG ER ++ +L++
Sbjct: 41 DQAGGVSLDDCTQFSEQLSGLLDQQE-TNFIPQAYYLEVSSPGAERPLKTAEDLKQAVGS 99
Query: 63 AMYVKYVGETVTTGSPSESDGVFRLISFDMETECCTWGL----ADVRINREKAGKGR 115
++VK + E + + E L D +T T + DV INR+ K R
Sbjct: 100 YIHVK-LYEMIGPDNAFEG----HLKEVDQDTITLTVKVKTRKKDVVINRDNISKAR 151
>gi|357059430|ref|ZP_09120272.1| hypothetical protein HMPREF9334_01989 [Selenomonas infelix ATCC
43532]
gi|355371507|gb|EHG18851.1| hypothetical protein HMPREF9334_01989 [Selenomonas infelix ATCC
43532]
Length = 149
Score = 38.5 bits (88), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELER---- 58
+K+G ++D ++ LD + IP+ LEVSSPG++RV+R P + R
Sbjct: 43 DKTGGVDIDDCQSLSERLEETLDREDF---IPDAYILEVSSPGLDRVLRNPRDFVREHGK 99
Query: 59 FKDRAMYVKYVGETVTTGSPSESDG 83
D +Y + G+ TG + DG
Sbjct: 100 MVDVTLYAPFDGKKQWTGVLAGCDG 124
>gi|260887248|ref|ZP_05898511.1| putative cytoplasmic protein [Selenomonas sputigena ATCC 35185]
gi|330838994|ref|YP_004413574.1| Ribosome maturation factor rimP [Selenomonas sputigena ATCC 35185]
gi|260863310|gb|EEX77810.1| putative cytoplasmic protein [Selenomonas sputigena ATCC 35185]
gi|329746758|gb|AEC00115.1| Ribosome maturation factor rimP [Selenomonas sputigena ATCC 35185]
Length = 150
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 7/109 (6%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDR 62
+K G ++D + T LDE ++ + E LEVSSPG++RV++ + ER + +
Sbjct: 42 DKEGGIEIDDCQRVSETLEQILDEKDL---LTEAYILEVSSPGLDRVLKKARDFEREQGK 98
Query: 63 AMYVKYV----GETVTTGSPSESDGVFRLISFDMETECCTWGLADVRIN 107
A+ V + G+ G+ + D I D E E +A VR++
Sbjct: 99 AVDVTFYAPVDGKKTWVGTLTGYDPGKNAIVLDGEKELPLEKIAQVRLH 147
>gi|385799865|ref|YP_005836269.1| hypothetical protein [Halanaerobium praevalens DSM 2228]
gi|309389229|gb|ADO77109.1| protein of unknown function DUF150 [Halanaerobium praevalens DSM
2228]
Length = 155
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
+ NK+G ++E+ E + LDE + I ++ LEVSSPG+ER ++ + ERFK
Sbjct: 44 LENKNGELTIEECEKVSRSLSMILDEED---PIDKSYILEVSSPGLERPLKTEEDFERFK 100
Query: 61 DRAMYVK 67
+ VK
Sbjct: 101 GELIAVK 107
>gi|312898334|ref|ZP_07757724.1| conserved hypothetical protein [Megasphaera micronuciformis F0359]
gi|310620253|gb|EFQ03823.1| conserved hypothetical protein [Megasphaera micronuciformis F0359]
Length = 153
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDR 62
+K G +ED +A LD + I + LEVSSPG++R+++ + R+KDR
Sbjct: 43 DKEGGVGLEDCQAVSEKLSEFLD---VKDPITDKYLLEVSSPGLDRILKKDTDFVRYKDR 99
Query: 63 AMYVKY 68
+ V +
Sbjct: 100 HVDVHF 105
>gi|323701862|ref|ZP_08113532.1| protein of unknown function DUF150 [Desulfotomaculum nigrificans
DSM 574]
gi|333923684|ref|YP_004497264.1| ribosome maturation factor rimP [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|323533166|gb|EGB23035.1| protein of unknown function DUF150 [Desulfotomaculum nigrificans
DSM 574]
gi|333749245|gb|AEF94352.1| Ribosome maturation factor rimP [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 153
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERF 59
+K G ++D + LDE + IP+ LEVSSPG+ER ++ P + ERF
Sbjct: 44 DKPGGVDLDDCQMLSEKLDKLLDELD---PIPQAYFLEVSSPGIERPLKKPEDFERF 97
>gi|402833847|ref|ZP_10882456.1| hypothetical protein HMPREF1153_1188 [Selenomonas sp. CM52]
gi|402279577|gb|EJU28361.1| hypothetical protein HMPREF1153_1188 [Selenomonas sp. CM52]
Length = 150
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 7/109 (6%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDR 62
+K G ++D + T LDE ++ + E LEVSSPG++RV++ + ER + +
Sbjct: 42 DKEGGIEIDDCQRVSETLEQILDEKDL---LTEAYILEVSSPGLDRVLKKARDFEREQGK 98
Query: 63 AMYVKYV----GETVTTGSPSESDGVFRLISFDMETECCTWGLADVRIN 107
A+ V + G+ G+ + D I D E E +A VR++
Sbjct: 99 AVDVTFYAPVDGKKTWVGTLTGYDPGKNAIVLDGEKELPLEKIAQVRLH 147
>gi|414155209|ref|ZP_11411524.1| Ribosome maturation factor rimP [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
gi|411453259|emb|CCO09428.1| Ribosome maturation factor rimP [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
Length = 153
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERF 59
+K G ++D +A LD+ + IP+ LEVSSPG+ER ++ P + +RF
Sbjct: 44 DKPGGVDLDDCQAVSEKIDTILDQLD---PIPQAYFLEVSSPGLERPLKKPADFQRF 97
>gi|403745573|ref|ZP_10954368.1| hypothetical protein URH17368_1670 [Alicyclobacillus hesperidum
URH17-3-68]
gi|403121291|gb|EJY55605.1| hypothetical protein URH17368_1670 [Alicyclobacillus hesperidum
URH17-3-68]
Length = 176
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEA-EIAKSIPENTSLEVSSPGVERVVRIPLELERFKD 61
+K G ++D C+ +L E +I IPE+ LEVSSPG ER ++ P + ER
Sbjct: 63 DKPGGVDIDD----CSRVSEQLSEQLDIVDPIPESYFLEVSSPGAERPLKKPADFERAIG 118
Query: 62 RAMYV 66
+YV
Sbjct: 119 EHVYV 123
>gi|336401426|ref|ZP_08582195.1| ribosome maturation factor rimP [Fusobacterium sp. 21_1A]
gi|336161013|gb|EGN64029.1| ribosome maturation factor rimP [Fusobacterium sp. 21_1A]
Length = 156
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 14/82 (17%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
+ N +G S+ED C+ +++ E +I K I LEVSSPG+ER P L++ +
Sbjct: 44 IENLNGDLSIED----CSKLSSKI-EDKIEKLIEHKFFLEVSSPGLER----P--LKKIE 92
Query: 61 DRAMYVKYVGETVTTGSPSESD 82
D Y++++GE +T + D
Sbjct: 93 D---YIRFIGEKITLHLKHKLD 111
>gi|304437179|ref|ZP_07397140.1| protein of hypothetical function DUF150 [Selenomonas sp. oral taxon
149 str. 67H29BP]
gi|304369841|gb|EFM23505.1| protein of hypothetical function DUF150 [Selenomonas sp. oral taxon
149 str. 67H29BP]
Length = 163
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVR----IPLELER 58
+K+G ++D + LD ++ IP+ +LEVSSPG++RV+R E R
Sbjct: 57 DKAGGIDIDDCQRLSERLEEILDREDV---IPDAYTLEVSSPGLDRVLRKERDFVREHGR 113
Query: 59 FKDRAMYVKYVGETVTTGSPSESDG 83
D +Y + G+ TG+ + DG
Sbjct: 114 VVDVTLYAPFEGKKQWTGTLAGYDG 138
>gi|337750007|ref|YP_004644169.1| protein RimP [Paenibacillus mucilaginosus KNP414]
gi|379722858|ref|YP_005314989.1| protein RimP [Paenibacillus mucilaginosus 3016]
gi|386725635|ref|YP_006191961.1| protein RimP [Paenibacillus mucilaginosus K02]
gi|336301196|gb|AEI44299.1| RimP [Paenibacillus mucilaginosus KNP414]
gi|378571530|gb|AFC31840.1| RimP [Paenibacillus mucilaginosus 3016]
gi|384092760|gb|AFH64196.1| protein RimP [Paenibacillus mucilaginosus K02]
Length = 152
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 49/117 (41%), Gaps = 16/117 (13%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDR 62
+K G ++D A+LDE + IP+ LE+SSPG ER PL K
Sbjct: 43 DKEGGIDIDDCTRVTEYLSAKLDEKD---PIPDAYFLEISSPGAER----PL-----KKT 90
Query: 63 AMYVKYVGETV--TTGSPSESDGVFR--LISFDMETECCTWGLADVRINREKAGKGR 115
Y K VGE V TT P F L SFD +T T G + I K R
Sbjct: 91 QDYHKAVGEHVFITTYEPVNGLKEFEGTLTSFDEQTVVVTVGKKEHSIPFAKVASAR 147
>gi|220931625|ref|YP_002508533.1| hypothetical protein Hore_07810 [Halothermothrix orenii H 168]
gi|259585780|sp|B8CW69.1|RIMP_HALOH RecName: Full=Ribosome maturation factor RimP
gi|219992935|gb|ACL69538.1| uncharacterized protein conserved in bacteria [Halothermothrix
orenii H 168]
Length = 159
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
+ N G +++ E +LDE + I E+ LEVSSPG+ER ++ + +RF
Sbjct: 41 IENPEGEVTLDHCENVSKNLDEKLDEVD---PIQESYILEVSSPGIERPLKKKEDFDRFS 97
Query: 61 DRAMYVK 67
+ Y+K
Sbjct: 98 GKLAYIK 104
>gi|239826653|ref|YP_002949277.1| hypothetical protein GWCH70_1151 [Geobacillus sp. WCH70]
gi|259585779|sp|C5D9C5.1|RIMP_GEOSW RecName: Full=Ribosome maturation factor RimP
gi|239806946|gb|ACS24011.1| protein of unknown function DUF150 [Geobacillus sp. WCH70]
Length = 157
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 12/78 (15%)
Query: 23 RLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDRAMYVKYVGETVTTGSPSESD 82
+LDE + IP N LEVSSPG ER ++ P + + + +Y+K T P E +
Sbjct: 63 KLDEVD---PIPHNYFLEVSSPGAERPLKKPKDFTKAIGKNVYIK-------TYEPIEGE 112
Query: 83 GVF--RLISFDMETECCT 98
F LI FD T T
Sbjct: 113 KEFEGELIGFDGTTVSVT 130
>gi|326791501|ref|YP_004309322.1| hypothetical protein Clole_2418 [Clostridium lentocellum DSM 5427]
gi|326542265|gb|ADZ84124.1| protein of unknown function DUF150 [Clostridium lentocellum DSM
5427]
Length = 153
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDR 62
+K G +++D + LDE + I + LEVSSPG++RV++ E ERFK R
Sbjct: 44 DKEGGITIQDCQLTSRAIEKVLDEKD---PIKDPYVLEVSSPGLDRVLKKDKEFERFKGR 100
Query: 63 AMYVK 67
+ VK
Sbjct: 101 LVDVK 105
>gi|297623579|ref|YP_003705013.1| hypothetical protein [Truepera radiovictrix DSM 17093]
gi|297164759|gb|ADI14470.1| protein of unknown function DUF150 [Truepera radiovictrix DSM
17093]
Length = 146
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 6/100 (6%)
Query: 6 GSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDRAMY 65
G +MED+E + LD + + LEV SPG ER +R RF
Sbjct: 42 GVVTMEDVERATQVFSLELDRLDPFEG---AYRLEVESPGPERPLRTAEHFRRFSGLLAK 98
Query: 66 VKYVGETVTTGSPSESDGVFRLISFDMETECCTWGLADVR 105
V+ GET T SD ++FD+ + T L D++
Sbjct: 99 VRAHGETFTGRVVEVSDAQ---VTFDVHGQPRTLALEDIQ 135
>gi|410667477|ref|YP_006919848.1| ribosome maturation factor RimP [Thermacetogenium phaeum DSM 12270]
gi|409105224|gb|AFV11349.1| ribosome maturation factor RimP [Thermacetogenium phaeum DSM 12270]
Length = 151
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDR 62
+K G + D E + LD+ +I IP LEVSSPGVER ++ P + RF+
Sbjct: 42 DKPGGVQLGDCEKASLLIGSELDKHDI---IPHRYYLEVSSPGVERPLKKPEDFLRFRGS 98
Query: 63 AMYVK 67
+ V+
Sbjct: 99 EIVVR 103
>gi|325847928|ref|ZP_08170099.1| hypothetical protein HMPREF9246_0391 [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325480797|gb|EGC83851.1| hypothetical protein HMPREF9246_0391 [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 146
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 4 KSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDRA 63
K G +++D E RLDE ++ KS LEVSSP + R ++ +LER KD
Sbjct: 42 KDGGITIDDCEKTSNLLSERLDEIDLIKSF---YYLEVSSPDLSRPLKTDRDLERNKDEL 98
Query: 64 MYVK 67
+ VK
Sbjct: 99 LEVK 102
>gi|442319339|ref|YP_007359360.1| hypothetical protein MYSTI_02360 [Myxococcus stipitatus DSM 14675]
gi|441486981|gb|AGC43676.1| hypothetical protein MYSTI_02360 [Myxococcus stipitatus DSM 14675]
Length = 161
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 28 EIAKSIPENTSLEVSSPGVERVVRIPLELERFKDRAMYVKYVG 70
++ IP SLEVSSPGV+R ++ P ER + + + VK G
Sbjct: 71 DVEDFIPHEYSLEVSSPGVDRPLKKPAHFERVQGQKVKVKTFG 113
>gi|332638632|ref|ZP_08417495.1| ribosome maturation protein RimP [Weissella cibaria KACC 11862]
Length = 228
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Query: 5 SGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDRAM 64
G+ +M+D+ T R+D+ E PE ++VSSPG ER ++ P + E ++ +
Sbjct: 45 DGAINMDDLVMLTETIGERMDQIE-PDPFPEAYLMDVSSPGAERELKRPQDYEWALEKYI 103
Query: 65 YVKYVGETVTTGSPSESDGVFRLISFDMETECCT 98
+V E +E DG ++ DM T T
Sbjct: 104 HVALNQE---VDGENEFDGELLAVTDDMLTLAIT 134
>gi|212696552|ref|ZP_03304680.1| hypothetical protein ANHYDRO_01090 [Anaerococcus hydrogenalis DSM
7454]
gi|212676488|gb|EEB36095.1| hypothetical protein ANHYDRO_01090 [Anaerococcus hydrogenalis DSM
7454]
Length = 146
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 4 KSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDRA 63
K G +++D E RLDE ++ KS LEVSSP + R ++ +LER KD
Sbjct: 42 KDGGITIDDCEKTSNLLSERLDEIDLIKSF---YYLEVSSPDLSRPLKTDRDLERNKDEL 98
Query: 64 MYVK 67
+ VK
Sbjct: 99 LEVK 102
>gi|269797843|ref|YP_003311743.1| hypothetical protein [Veillonella parvula DSM 2008]
gi|269094472|gb|ACZ24463.1| protein of unknown function DUF150 [Veillonella parvula DSM 2008]
Length = 152
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDR 62
+K G ++D + A LDE + I EN LEVSSPG++RV++ +L R+ R
Sbjct: 43 DKPGGVDLDDCQLVSEKLSAVLDEKD---PITENYLLEVSSPGLDRVLKKDKDLVRYNGR 99
Query: 63 AMYVK 67
+ ++
Sbjct: 100 DVDIQ 104
>gi|134299808|ref|YP_001113304.1| hypothetical protein Dred_1961 [Desulfotomaculum reducens MI-1]
gi|259585752|sp|A4J5X6.1|RIMP_DESRM RecName: Full=Ribosome maturation factor RimP
gi|134052508|gb|ABO50479.1| protein of unknown function DUF150 [Desulfotomaculum reducens MI-1]
Length = 153
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 12/93 (12%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDR 62
+K G ++D + LDE + +P+ LEVSSPG+ER ++ P + E+F
Sbjct: 44 DKPGGIELDDCQGVSEKIDTLLDEID---PVPQAYFLEVSSPGIERPLKKPQDFEKFNGH 100
Query: 63 AMYVKYVGETVTTGSPSESDGVF--RLISFDME 93
+ +TT +P F +L+ ++ E
Sbjct: 101 LV-------NITTFAPINGSKNFIGKLLDYNEE 126
>gi|383457990|ref|YP_005371979.1| hypothetical protein COCOR_06026 [Corallococcus coralloides DSM
2259]
gi|380730715|gb|AFE06717.1| hypothetical protein COCOR_06026 [Corallococcus coralloides DSM
2259]
Length = 161
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 33 IPENTSLEVSSPGVERVVRIPLELERFKDRAMYVKYVG 70
IP+ +LEVSSPGV R ++ P ER K + + VK G
Sbjct: 76 IPQEYNLEVSSPGVNRPLKKPAHFERVKGQKVKVKTFG 113
>gi|282848826|ref|ZP_06258219.1| conserved hypothetical protein [Veillonella parvula ATCC 17745]
gi|294791738|ref|ZP_06756886.1| conserved hypothetical protein [Veillonella sp. 6_1_27]
gi|294793599|ref|ZP_06758736.1| conserved hypothetical protein [Veillonella sp. 3_1_44]
gi|416998971|ref|ZP_11939640.1| hypothetical protein HMPREF9323_0443 [Veillonella parvula
ACS-068-V-Sch12]
gi|282581480|gb|EFB86870.1| conserved hypothetical protein [Veillonella parvula ATCC 17745]
gi|294455169|gb|EFG23541.1| conserved hypothetical protein [Veillonella sp. 3_1_44]
gi|294456968|gb|EFG25330.1| conserved hypothetical protein [Veillonella sp. 6_1_27]
gi|333977124|gb|EGL77983.1| hypothetical protein HMPREF9323_0443 [Veillonella parvula
ACS-068-V-Sch12]
Length = 152
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDR 62
+K G ++D + A LDE + I EN LEVSSPG++RV++ +L R+ R
Sbjct: 43 DKPGGVDLDDCQLVSEKLSAVLDEKD---PITENYLLEVSSPGLDRVLKKDKDLVRYNGR 99
Query: 63 AMYVK 67
+ ++
Sbjct: 100 DVDIQ 104
>gi|410658717|ref|YP_006911088.1| hypothetical protein DHBDCA_p2076 [Dehalobacter sp. DCA]
gi|410661706|ref|YP_006914077.1| hypothetical protein DCF50_p2089 [Dehalobacter sp. CF]
gi|409021072|gb|AFV03103.1| hypothetical protein DHBDCA_p2076 [Dehalobacter sp. DCA]
gi|409024062|gb|AFV06092.1| hypothetical protein DCF50_p2089 [Dehalobacter sp. CF]
Length = 135
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 53/119 (44%), Gaps = 23/119 (19%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEA-EIAKSIPENTSLEVSSPGVERVVRIPLELERFKD 61
+K G ++D C +++E + IP+ LEVSSPG+ER PL K
Sbjct: 26 DKEGGVEIDD----CAEVSHQINEVLDKENPIPQAYMLEVSSPGIER----PL-----KK 72
Query: 62 RAMYVKYVGETVTTGSPSESDGVFRLISFDMETECCTWGLADVRINREKAGK--GRPLS 118
R Y+KY G+ V+ + +G R GLAD ++ E G+ PLS
Sbjct: 73 REDYIKYTGKLVSINTTEVFEGYSRFTG-------NLKGLADDQVILEYEGREIAIPLS 124
>gi|434400155|ref|YP_007134159.1| Ribosome maturation factor rimP [Stanieria cyanosphaera PCC 7437]
gi|428271252|gb|AFZ37193.1| Ribosome maturation factor rimP [Stanieria cyanosphaera PCC 7437]
Length = 153
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDR 62
N S S++D E A LD EI IP + LE+SSPG+ R + E FK
Sbjct: 44 NLSADTSLDDCERMSLALEATLDTTEI---IPGSYVLEISSPGISRTLTTDREFISFKGF 100
Query: 63 AMYVK 67
++ VK
Sbjct: 101 SVIVK 105
>gi|289423156|ref|ZP_06424971.1| conserved hypothetical protein [Peptostreptococcus anaerobius
653-L]
gi|289156487|gb|EFD05137.1| conserved hypothetical protein [Peptostreptococcus anaerobius
653-L]
Length = 154
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 24 LDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDRAMYVK-YVGETVTTGSPSESD 82
LDE ++ I EN LEV SPG++R+++ E E++ + + VK Y + G E+D
Sbjct: 64 LDEKDM---IEENYLLEVCSPGIDRILKRDHEYEKYSGKLVEVKLYANNDIVKGKHFEAD 120
Query: 83 GVFRLISFDMETECCTWGLADVRINREKAGKGR 115
L + + + ++++NR++ + R
Sbjct: 121 ----LCGLEDDNIVLLYKGKELKLNRKEVAQVR 149
>gi|429727386|ref|ZP_19262159.1| hypothetical protein HMPREF9998_00098 [Peptostreptococcus
anaerobius VPI 4330]
gi|429152688|gb|EKX95503.1| hypothetical protein HMPREF9998_00098 [Peptostreptococcus
anaerobius VPI 4330]
Length = 154
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 24 LDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDRAMYVK-YVGETVTTGSPSESD 82
LDE ++ I EN LEV SPG++R+++ E E++ + + VK Y + G E+D
Sbjct: 64 LDEKDM---IEENYLLEVCSPGIDRILKRDHEYEKYSGKLVEVKLYANNDIVKGKHFEAD 120
Query: 83 GVFRLISFDMETECCTWGLADVRINREKAGKGR 115
L + + + ++++NR++ + R
Sbjct: 121 ----LCGLEDDNIVLLYKGKELKLNRKEVAQVR 149
>gi|313893703|ref|ZP_07827270.1| conserved hypothetical protein [Veillonella sp. oral taxon 158 str.
F0412]
gi|313441717|gb|EFR60142.1| conserved hypothetical protein [Veillonella sp. oral taxon 158 str.
F0412]
Length = 152
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDR 62
+K G ++D + A LDE + I EN LEVSSPG++RV++ +L R+ R
Sbjct: 43 DKPGGVDLDDCQLVSEKLSAVLDEKD---PITENYLLEVSSPGLDRVLKKDKDLIRYNGR 99
Query: 63 AMYVK 67
+ ++
Sbjct: 100 DVDIQ 104
>gi|239617902|ref|YP_002941224.1| hypothetical protein Kole_1530 [Kosmotoga olearia TBF 19.5.1]
gi|239506733|gb|ACR80220.1| protein of unknown function DUF150 [Kosmotoga olearia TBF 19.5.1]
Length = 167
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
+ + G S+ D E F + +LDE EI I + +L + SPG ER +R P + RF
Sbjct: 54 IDKEDGYISISDCENFSRAFEKKLDETEI---ISSSYNLVIESPGAERELRKPGDFMRFT 110
Query: 61 DRAMYV 66
+++ +
Sbjct: 111 GKSVKI 116
>gi|238927233|ref|ZP_04658993.1| protein of hypothetical function DUF150 [Selenomonas flueggei ATCC
43531]
gi|238884908|gb|EEQ48546.1| protein of hypothetical function DUF150 [Selenomonas flueggei ATCC
43531]
Length = 163
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVR----IPLELER 58
+K+G ++D ++ LD + IP+ LEVSSPG++RV+R E R
Sbjct: 57 DKTGGIDIDDCQSLSERLEEMLDREDF---IPDAYILEVSSPGLDRVLRKERDFTREHGR 113
Query: 59 FKDRAMYVKYVGETVTTGSPSESDG 83
D +Y + G+ TG+ + DG
Sbjct: 114 TVDVTLYAPFEGKKQWTGTLAGYDG 138
>gi|238019443|ref|ZP_04599869.1| hypothetical protein VEIDISOL_01312 [Veillonella dispar ATCC 17748]
gi|237864142|gb|EEP65432.1| hypothetical protein VEIDISOL_01312 [Veillonella dispar ATCC 17748]
Length = 170
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDR 62
+K G ++D + A LDE + I EN LEVSSPG++RV++ +L R+ R
Sbjct: 61 DKPGGVDLDDCQLVSEKLSAVLDEKD---PITENYLLEVSSPGLDRVLKKDKDLVRYNGR 117
>gi|313896717|ref|ZP_07830265.1| conserved hypothetical protein [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312974634|gb|EFR40101.1| conserved hypothetical protein [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 149
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEA-EIAKSIPENTSLEVSSPGVERVVRIPLELERFK- 60
+K G +ED C T RL+E + I + LEVSSPG++RV+R + ER
Sbjct: 43 DKEGGIDIED----CRTLSERLEEILDREDFIADAYILEVSSPGLDRVLRKARDFEREHG 98
Query: 61 ---DRAMYVKYVGETVTTGSPSESDGVFRLISFDM 92
D A+Y G+ TG + DG ++ D+
Sbjct: 99 KRVDVALYAPLDGKKNLTGELTGYDGNVLILDDDV 133
>gi|312111639|ref|YP_003989955.1| hypothetical protein GY4MC1_2648 [Geobacillus sp. Y4.1MC1]
gi|336236014|ref|YP_004588630.1| hypothetical protein Geoth_2661 [Geobacillus thermoglucosidasius
C56-YS93]
gi|423720558|ref|ZP_17694740.1| ribosome maturation protein rimP [Geobacillus thermoglucosidans
TNO-09.020]
gi|311216740|gb|ADP75344.1| protein of unknown function DUF150 [Geobacillus sp. Y4.1MC1]
gi|335362869|gb|AEH48549.1| protein of unknown function DUF150 [Geobacillus thermoglucosidasius
C56-YS93]
gi|383365911|gb|EID43202.1| ribosome maturation protein rimP [Geobacillus thermoglucosidans
TNO-09.020]
Length = 157
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 12 DIEAFCTTYRARLDEA-EIAKSIPENTSLEVSSPGVERVVRIPLELERFKDRAMYVK 67
DIE C T +L E + IP N LEVSSPG ER ++ P + R + +Y+K
Sbjct: 49 DIEQ-CGTVSEKLSEKLDEVDPIPHNYFLEVSSPGAERPLKKPADFTRAIGKHVYIK 104
>gi|210622609|ref|ZP_03293269.1| hypothetical protein CLOHIR_01217 [Clostridium hiranonis DSM 13275]
gi|210154110|gb|EEA85116.1| hypothetical protein CLOHIR_01217 [Clostridium hiranonis DSM 13275]
Length = 154
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDR 62
+K G S+ + E +LDE + I EN LEVSSPG++R ++ E ++K R
Sbjct: 44 DKEGGISLNECEEVSRELSPKLDENDF---IEENYYLEVSSPGIDRALKRDKEFVKYKGR 100
Query: 63 AMYVK 67
+ +K
Sbjct: 101 DVEIK 105
>gi|289766526|ref|ZP_06525904.1| conserved hypothetical protein [Fusobacterium sp. D11]
gi|422939806|ref|ZP_16967178.1| hypothetical protein HMPREF9094_1231 [Fusobacterium nucleatum
subsp. animalis ATCC 51191]
gi|423137622|ref|ZP_17125265.1| ribosome maturation factor rimP [Fusobacterium nucleatum subsp.
animalis F0419]
gi|289718081|gb|EFD82093.1| conserved hypothetical protein [Fusobacterium sp. D11]
gi|339890657|gb|EGQ79751.1| hypothetical protein HMPREF9094_1231 [Fusobacterium nucleatum
subsp. animalis ATCC 51191]
gi|371959674|gb|EHO77352.1| ribosome maturation factor rimP [Fusobacterium nucleatum subsp.
animalis F0419]
Length = 156
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 14/82 (17%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
+ N +G S+ED C+ +++ E +I K I LEVSSPG+ER P L++ +
Sbjct: 44 IENLNGDLSIED----CSKLSSKI-EDKIEKLIEHKFFLEVSSPGLER----P--LKKIE 92
Query: 61 DRAMYVKYVGETVTTGSPSESD 82
D Y+++ GE +T + D
Sbjct: 93 D---YIRFTGEKITLHLKHKLD 111
>gi|375088710|ref|ZP_09735048.1| hypothetical protein HMPREF9703_01130 [Dolosigranulum pigrum ATCC
51524]
gi|374561675|gb|EHR33014.1| hypothetical protein HMPREF9703_01130 [Dolosigranulum pigrum ATCC
51524]
Length = 156
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 10/117 (8%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDR 62
+K G S++D F A LD+ + IP+ LEVSSPG ER ++ ++++
Sbjct: 41 DKVGGVSLDDCTFFSEKVSAVLDQ-QPENFIPQAYYLEVSSPGAERPLKTREDIDQAVGE 99
Query: 63 AMYVKYVGETVTTGSPSESDGVFRLISFDMETECCTWG----LADVRINREKAGKGR 115
++VK G + +G RL+S D +T + + +V I R+ K R
Sbjct: 100 YIHVKLYN---MIGPYNSYEG--RLLSTDEDTITMNYKEKTRVKEVEIQRDNISKAR 151
>gi|237743253|ref|ZP_04573734.1| conserved hypothetical protein [Fusobacterium sp. 7_1]
gi|336420050|ref|ZP_08600296.1| hypothetical protein HMPREF0401_02316 [Fusobacterium sp. 11_3_2]
gi|229433032|gb|EEO43244.1| conserved hypothetical protein [Fusobacterium sp. 7_1]
gi|336162191|gb|EGN65173.1| hypothetical protein HMPREF0401_02316 [Fusobacterium sp. 11_3_2]
Length = 156
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 14/82 (17%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
+ N +G S+ED C+ +++ E +I K I LEVSSPG+ER P L++ +
Sbjct: 44 IENLNGDLSIED----CSKLSSKI-EDKIEKLIEHKFFLEVSSPGLER----P--LKKIE 92
Query: 61 DRAMYVKYVGETVTTGSPSESD 82
D Y+++ GE +T + D
Sbjct: 93 D---YIRFTGEKITLHLKHKLD 111
>gi|169831085|ref|YP_001717067.1| hypothetical protein Daud_0922 [Candidatus Desulforudis audaxviator
MP104C]
gi|226696028|sp|B1I359.1|RIMP_DESAP RecName: Full=Ribosome maturation factor RimP
gi|169637929|gb|ACA59435.1| protein of unknown function DUF150 [Candidatus Desulforudis
audaxviator MP104C]
Length = 154
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDR 62
+K G +++D EA LD+ + IP + LEVSSPG+ER ++ + RFK R
Sbjct: 44 DKPGGINLDDCEAVSRELDRALDDVDF---IPHSYVLEVSSPGLERPLKRAEDYVRFKGR 100
Query: 63 AMYV 66
+ +
Sbjct: 101 LVQI 104
>gi|332295449|ref|YP_004437372.1| ribosome maturation factor rimP [Thermodesulfobium narugense DSM
14796]
gi|332178552|gb|AEE14241.1| Ribosome maturation factor rimP [Thermodesulfobium narugense DSM
14796]
Length = 159
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
+ N S++D E A LD ++ IPE+ LEVSSPG+ER ++ + RFK
Sbjct: 43 IDNLEKPISLDDCELVSKKLSAILDYYDL---IPESFYLEVSSPGIERKLKKDSDFTRFK 99
Query: 61 DRAMYVKY----VGETVTTGSPSESDGVFRLIS 89
+ V + + + +SDG + +++
Sbjct: 100 GEEIIVIFQKPNISPIIGILEGIDSDGNYIIVN 132
>gi|313892594|ref|ZP_07826181.1| conserved hypothetical protein [Dialister microaerophilus UPII
345-E]
gi|313118991|gb|EFR42196.1| conserved hypothetical protein [Dialister microaerophilus UPII
345-E]
Length = 156
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDR 62
+K G + D + + +D+ ++ I +N LEVSSPG++RV++ + R+KD
Sbjct: 43 DKDGGVDLNDCQEISVSAGELIDKNDL---ISDNYMLEVSSPGIDRVLKKDKDFIRYKDS 99
Query: 63 AMYVK 67
+ VK
Sbjct: 100 KVSVK 104
>gi|260495124|ref|ZP_05815253.1| conserved hypothetical protein [Fusobacterium sp. 3_1_33]
gi|260197567|gb|EEW95085.1| conserved hypothetical protein [Fusobacterium sp. 3_1_33]
Length = 156
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 14/82 (17%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
+ N +G S+ED C+ +++ E +I K I LEVSSPG+ER P L++ +
Sbjct: 44 IENLNGDLSIED----CSKLSSKI-EDKIEKLIEHKFFLEVSSPGLER----P--LKKIE 92
Query: 61 DRAMYVKYVGETVTTGSPSESD 82
D Y+++ GE +T + D
Sbjct: 93 D---YIRFTGEKITLHLKHKLD 111
>gi|336113851|ref|YP_004568618.1| hypothetical protein BCO26_1173 [Bacillus coagulans 2-6]
gi|335367281|gb|AEH53232.1| protein of unknown function DUF150 [Bacillus coagulans 2-6]
Length = 155
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 12/70 (17%)
Query: 23 RLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDRAMYVKYVGETVTTGSPSESD 82
+LDEA+ IP N LEVSSPG ER ++ + ER R + VK T P + +
Sbjct: 62 KLDEAD---PIPHNYFLEVSSPGAERPLKKARDFERAVGRTVLVK-------TYEPLDGE 111
Query: 83 GVF--RLISF 90
F +LI+F
Sbjct: 112 KTFQGKLIAF 121
>gi|329121256|ref|ZP_08249883.1| hypothetical protein HMPREF9083_0344 [Dialister micraerophilus DSM
19965]
gi|327470190|gb|EGF15653.1| hypothetical protein HMPREF9083_0344 [Dialister micraerophilus DSM
19965]
Length = 156
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDR 62
+K G + D + + +D+ ++ I +N LEVSSPG++RV++ + R+KD
Sbjct: 43 DKDGGVDLNDCQEISVSAGELIDKNDL---ISDNYMLEVSSPGIDRVLKKDKDFIRYKDS 99
Query: 63 AMYVK 67
+ VK
Sbjct: 100 KVSVK 104
>gi|302389799|ref|YP_003825620.1| hypothetical protein Toce_1241 [Thermosediminibacter oceani DSM
16646]
gi|302200427|gb|ADL07997.1| protein of unknown function DUF150 [Thermosediminibacter oceani DSM
16646]
Length = 162
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 12/71 (16%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDR 62
+K G +++D + RLD I IP + LEVSSPGVER PL+ E+
Sbjct: 44 DKPGGITLDDCQEVSEEISRRLD---IEDPIPHSYILEVSSPGVER----PLKKEK---- 92
Query: 63 AMYVKYVGETV 73
++KY+G V
Sbjct: 93 -DFLKYIGSEV 102
>gi|256544695|ref|ZP_05472067.1| hypothetical protein HMPREF0078_0324 [Anaerococcus vaginalis ATCC
51170]
gi|256399584|gb|EEU13189.1| hypothetical protein HMPREF0078_0324 [Anaerococcus vaginalis ATCC
51170]
Length = 152
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 4 KSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDRA 63
K G +++D E RLDE ++ KS LEVSSP + R ++ +LER KD
Sbjct: 48 KDGGITIDDCEKTSNFLSERLDEIDLIKSF---YYLEVSSPDLSRPLKTDRDLERNKDEL 104
Query: 64 MYVK 67
+ +K
Sbjct: 105 LEIK 108
>gi|78044682|ref|YP_360590.1| hypothetical protein CHY_1770 [Carboxydothermus hydrogenoformans
Z-2901]
gi|91208344|sp|Q3AB94.1|RIMP_CARHZ RecName: Full=Ribosome maturation factor RimP
gi|77996797|gb|ABB15696.1| conserved hypothetical protein [Carboxydothermus hydrogenoformans
Z-2901]
Length = 154
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDR 62
+K ++D + F LDE + IP++ LEVSSPG+ER ++ + E+F R
Sbjct: 45 DKDEGVDLDDCQNFSERIGVILDEED---PIPQSYYLEVSSPGIERPLKKLADFEKFAGR 101
Query: 63 AMYVK 67
+K
Sbjct: 102 EAQIK 106
>gi|398304220|ref|ZP_10507806.1| ribosome maturation protein RimP [Bacillus vallismortis DV1-F-3]
Length = 156
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 30/118 (25%)
Query: 23 RLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDRAMYVKYVGETVTTGSPSESD 82
+LDEA+ I +N LEVSSPG ER ++ + E+ + +Y+K T P E
Sbjct: 63 KLDEAD---PISQNYFLEVSSPGAERPLKKKADFEKSLGKNVYIK-------TYEPIEGA 112
Query: 83 GVF--RLISFDMETECCTWGLADVRINREKAGKGRPLSKKQREWRLNTTFDSLRLVRL 138
VF L FD +T ++ K R+ R+N +D + RL
Sbjct: 113 KVFEGELAEFDGQTVTVE------------------ITIKTRKKRINIPYDKIANARL 152
>gi|310658998|ref|YP_003936719.1| conserved protein of unknown function [[Clostridium] sticklandii]
gi|308825776|emb|CBH21814.1| conserved protein of unknown function [[Clostridium] sticklandii]
Length = 152
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVR 51
+K G S++D + F +LDE + I EN LE+SSPG++R ++
Sbjct: 42 DKQGKMSLDDCQHFSHLISEKLDELD---PIEENYMLEISSPGLDRHLK 87
>gi|312143667|ref|YP_003995113.1| hypothetical protein Halsa_1332 [Halanaerobium hydrogeniformans]
gi|311904318|gb|ADQ14759.1| protein of unknown function DUF150 [Halanaerobium hydrogeniformans]
Length = 156
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
+ NK G ++E+ E LDE + I ++ LEVSSPG+ER ++ + ERF+
Sbjct: 44 LENKEGELTIEECERVSRALSVILDEED---PIDKSYILEVSSPGLERPLKTEEDFERFQ 100
Query: 61 DRAMYVK 67
+ VK
Sbjct: 101 GELISVK 107
>gi|160883585|ref|ZP_02064588.1| hypothetical protein BACOVA_01557 [Bacteroides ovatus ATCC 8483]
gi|423291620|ref|ZP_17270467.1| hypothetical protein HMPREF1069_05510 [Bacteroides ovatus
CL02T12C04]
gi|156110998|gb|EDO12743.1| hypothetical protein BACOVA_01557 [Bacteroides ovatus ATCC 8483]
gi|392662743|gb|EIY56299.1| hypothetical protein HMPREF1069_05510 [Bacteroides ovatus
CL02T12C04]
Length = 230
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 69/149 (46%), Gaps = 16/149 (10%)
Query: 5 SGSPSMEDIEAFCTTYRAR------LDEAEI-AKSIPE-NTSLEVSSPGVERVVR-IPLE 55
+P ++ ++AF + Y LD +I AK++P + + + S +E V+ I L+
Sbjct: 62 QNTPFLKKLDAFASDYNLIENELNGLDVVKIFAKNVPSYHKKILLYSAKIENVISDILLK 121
Query: 56 LERFKDRAMYVKYVGETVTTGSPSESDGVFRLIS-------FDMETECCTWGLADVRINR 108
+ F+++ +K++ ET + ++ LIS FD E E C W +++ I +
Sbjct: 122 NKDFEEQKKTLKFLSETPIEYAKNDEKLQQNLISHIKKEKDFDFERELCDWLMSNELIYK 181
Query: 109 EKAGKGRPLSKKQREWRLNTTFDSLRLVR 137
+G P K T DS++L R
Sbjct: 182 FPPYEGIPCCKIGDILLSKNTSDSIKLKR 210
>gi|148263955|ref|YP_001230661.1| hypothetical protein Gura_1898 [Geobacter uraniireducens Rf4]
gi|189030115|sp|A5GF83.1|RIMP_GEOUR RecName: Full=Ribosome maturation factor RimP
gi|146397455|gb|ABQ26088.1| protein of unknown function DUF150 [Geobacter uraniireducens Rf4]
Length = 159
Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEA-EIAKSIPENTSLEVSSPGVERVVRIPLELERFKD 61
+K G +++D C + L E ++ I E+ SLEVSSPG++R ++ + +RFK
Sbjct: 44 DKEGGVNLDD----CASVSRELSEVLDVEDVISEHYSLEVSSPGIDRPLKKVEDFQRFKG 99
Query: 62 RAMYVK 67
R + ++
Sbjct: 100 RLVKIR 105
>gi|303229567|ref|ZP_07316355.1| conserved hypothetical protein [Veillonella atypica
ACS-134-V-Col7a]
gi|303232094|ref|ZP_07318797.1| conserved hypothetical protein [Veillonella atypica ACS-049-V-Sch6]
gi|302513200|gb|EFL55239.1| conserved hypothetical protein [Veillonella atypica ACS-049-V-Sch6]
gi|302515692|gb|EFL57646.1| conserved hypothetical protein [Veillonella atypica
ACS-134-V-Col7a]
Length = 152
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDR 62
+K G ++D + A LDE + I EN LEVSSPG++RV++ + R+ R
Sbjct: 43 DKPGGVDLDDCQMVSEKLSAALDEKD---PIAENYLLEVSSPGLDRVLKKDKDFIRYNGR 99
Query: 63 AMYVK 67
+ ++
Sbjct: 100 DVDIQ 104
>gi|402836946|ref|ZP_10885477.1| hypothetical protein HMPREF1152_0401 [Mogibacterium sp. CM50]
gi|402269962|gb|EJU19231.1| hypothetical protein HMPREF1152_0401 [Mogibacterium sp. CM50]
Length = 158
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 6/57 (10%)
Query: 11 EDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDRAMYVK 67
ED+ F + RLDE + I + +LEVSSPG++R + P + ERFK R + VK
Sbjct: 60 EDVTHFLSD---RLDEEDF---IERSYTLEVSSPGLDRELLKPSDYERFKGRDVEVK 110
>gi|425469661|ref|ZP_18848579.1| Ribosome maturation factor rimP [Microcystis aeruginosa PCC 9701]
gi|389880458|emb|CCI38784.1| Ribosome maturation factor rimP [Microcystis aeruginosa PCC 9701]
Length = 156
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
+ N +G +ED E LD EI +PE LE+SSPG+ R + E + FK
Sbjct: 42 IRNLAGDTGLEDCEQMSRALETALDSQEI---LPEAYVLEISSPGISRQLSSEREFQSFK 98
>gi|401680035|ref|ZP_10811959.1| hypothetical protein HMPREF1151_1866 [Veillonella sp. ACP1]
gi|400219162|gb|EJO50033.1| hypothetical protein HMPREF1151_1866 [Veillonella sp. ACP1]
Length = 152
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDR 62
+K G ++D + A LDE + I EN LEVSSPG++RV++ + R+ R
Sbjct: 43 DKPGGVDLDDCQIVSEKLSAALDEKD---PIAENYLLEVSSPGLDRVLKKDKDFIRYNGR 99
Query: 63 AMYVK 67
+ ++
Sbjct: 100 DVDIQ 104
>gi|398344770|ref|ZP_10529473.1| hypothetical protein LinasL1_17347 [Leptospira inadai serovar Lyme
str. 10]
gi|398346787|ref|ZP_10531490.1| hypothetical protein Lbro5_06074 [Leptospira broomii str. 5399]
Length = 150
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 6/73 (8%)
Query: 17 CTTYRARLDEAEIAKSIPE-NTSLEVSSPGVERVVRIPLELERFKDRAMYVKYVGETVTT 75
C +L+E E+ + P+ N +L+VSS G ER + +P +L+RF+ + + Y E
Sbjct: 55 CEQVSRKLNE-ELERIFPDLNYTLKVSSAGAERKLVLPEDLDRFRGIPVRLVYRVE---- 109
Query: 76 GSPSESDGVFRLI 88
G E +G+FR++
Sbjct: 110 GESGEKEGIFRIL 122
>gi|429759694|ref|ZP_19292190.1| hypothetical protein HMPREF0870_00623 [Veillonella atypica KON]
gi|429179284|gb|EKY20540.1| hypothetical protein HMPREF0870_00623 [Veillonella atypica KON]
Length = 154
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDR 62
+K G ++D + A LDE + I EN LEVSSPG++RV++ + R+ R
Sbjct: 45 DKPGGVDLDDCQMVSEKLSAALDEKD---PIAENYLLEVSSPGLDRVLKKDKDFIRYNGR 101
Query: 63 AMYVK 67
+ ++
Sbjct: 102 DVDIQ 106
>gi|307155147|ref|YP_003890531.1| hypothetical protein Cyan7822_5377 [Cyanothece sp. PCC 7822]
gi|306985375|gb|ADN17256.1| protein of unknown function DUF150 [Cyanothece sp. PCC 7822]
Length = 153
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
+ NKS S+ D E + A LD E+ IP + LE+SSPG+ R + E FK
Sbjct: 42 IRNKSSDTSLNDCEQMSRSLEANLDATEL---IPGSYVLEISSPGISRQLNSDREFIVFK 98
Query: 61 DRAMYVK 67
+ VK
Sbjct: 99 GFDIIVK 105
>gi|222099942|ref|YP_002534510.1| hypothetical protein CTN_0968 [Thermotoga neapolitana DSM 4359]
gi|254807290|sp|B9K861.1|RIMP_THENN RecName: Full=Ribosome maturation factor RimP
gi|221572332|gb|ACM23144.1| Hypothetical Protein CTN_0968 [Thermotoga neapolitana DSM 4359]
Length = 150
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
+ N G S+ D E F LD ++ I + +LEVSSPG++R +R P + +RF
Sbjct: 43 IDNPVGYVSVRDCELFSRELERFLDREDL---IEHSYTLEVSSPGLDRPLRGPKDYQRFT 99
Query: 61 DR-AMYVKYVGETVTTGSPSESDGV 84
+ A + G+T S DG+
Sbjct: 100 GKLAKIITKDGKTFIGRIESFVDGI 124
>gi|254457876|ref|ZP_05071303.1| Helicase conserved C-terminal domain protein [Sulfurimonas
gotlandica GD1]
gi|373869055|ref|ZP_09605453.1| protein containing DNA/RNA helicase C-terminal domain [Sulfurimonas
gotlandica GD1]
gi|207085269|gb|EDZ62554.1| Helicase conserved C-terminal domain protein [Sulfurimonas
gotlandica GD1]
gi|372471156|gb|EHP31360.1| protein containing DNA/RNA helicase C-terminal domain [Sulfurimonas
gotlandica GD1]
Length = 212
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 38/61 (62%), Gaps = 5/61 (8%)
Query: 38 SLEVSSPGVERVVR--IPLELERFKDRAMYVKYVGETVTTGSPSESDGVFRLISFDMETE 95
SLE+++ ++R+V +P++ E + R YV VGE ++ +P E +G+ ++I F M+ E
Sbjct: 110 SLELTN--IQRIVNYDLPIQQEEYFIRLAYVDEVGEAISFVAPDE-EGMLQIIEFKMKLE 166
Query: 96 C 96
Sbjct: 167 I 167
>gi|433445992|ref|ZP_20410123.1| ribosome maturation factor RimP [Anoxybacillus flavithermus
TNO-09.006]
gi|432000737|gb|ELK21629.1| ribosome maturation factor RimP [Anoxybacillus flavithermus
TNO-09.006]
Length = 156
Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 7 SPSMEDIEAFCTTYRARLDEA-EIAKSIPENTSLEVSSPGVERVVRIPLELERFKDRAMY 65
SP+ DI+ C RL E + IP N LEVSSPG ER ++ + ER + +Y
Sbjct: 43 SPTGVDIDQ-CGVVSERLSEKLDEIDPIPHNYFLEVSSPGAERPLKKMKDFERAVGKNVY 101
Query: 66 VK 67
VK
Sbjct: 102 VK 103
>gi|317125352|ref|YP_004099464.1| hypothetical protein Intca_2228 [Intrasporangium calvum DSM 43043]
gi|315589440|gb|ADU48737.1| protein of unknown function DUF150 [Intrasporangium calvum DSM
43043]
Length = 197
Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 9 SMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDRAMYVKY 68
S++DI RLD++++ S+P LEVSSPGV R +R + R R + V +
Sbjct: 60 SLDDIADATRAVSTRLDDSDVMGSMP--YVLEVSSPGVGRPLRSRHDFRRQVGRLVDVAH 117
Query: 69 VGETVT 74
G +VT
Sbjct: 118 EGGSVT 123
>gi|399055573|ref|ZP_10743268.1| hypothetical protein PMI08_04878 [Brevibacillus sp. CF112]
gi|433546012|ref|ZP_20502350.1| hypothetical protein D478_20099 [Brevibacillus agri BAB-2500]
gi|398046782|gb|EJL39366.1| hypothetical protein PMI08_04878 [Brevibacillus sp. CF112]
gi|432182628|gb|ELK40191.1| hypothetical protein D478_20099 [Brevibacillus agri BAB-2500]
Length = 152
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 16/95 (16%)
Query: 1 MSNKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
+ N++G+ ++D +LDE + IP LEVSSPG ER +R K
Sbjct: 41 IDNETGNIDIDDCSLVSEKLSQKLDEVD---PIPTAYFLEVSSPGAERPLR--------K 89
Query: 61 DRAMYVKYVGETV--TTGSPSESDGVF--RLISFD 91
D+ + K VG V TT P E +F LIS++
Sbjct: 90 DKD-FTKAVGRHVHITTKEPIEGASLFEGELISYE 123
>gi|150390439|ref|YP_001320488.1| hypothetical protein Amet_2677 [Alkaliphilus metalliredigens QYMF]
gi|259585692|sp|A6TRL1.1|RIMP_ALKMQ RecName: Full=Ribosome maturation factor RimP
gi|149950301|gb|ABR48829.1| protein of unknown function DUF150 [Alkaliphilus metalliredigens
QYMF]
Length = 152
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDR 62
+K G +++D + +LDEA+ I EN LEVSSPG++R ++ ++ +FK
Sbjct: 42 DKPGGITLDDCQKVSEGLSKKLDEAD---PIVENYFLEVSSPGLDRPLKREVDFLKFKGE 98
Query: 63 AMYVK 67
+ +K
Sbjct: 99 MIELK 103
>gi|326333614|ref|ZP_08199852.1| hypothetical protein NBCG_05048 [Nocardioidaceae bacterium Broad-1]
gi|325948595|gb|EGD40697.1| hypothetical protein NBCG_05048 [Nocardioidaceae bacterium Broad-1]
Length = 166
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDR 62
+K G + E++ LDE+++ P +LEV+SPGV+R + +P R K R
Sbjct: 53 DKDGGITHEEVTEATREVNRVLDESDVMGEQP--YTLEVTSPGVDRPLTLPRHWRRNKGR 110
Query: 63 AMYVKYVGETVTTGSPSESD 82
+ V + TG ESD
Sbjct: 111 LVKVTATDGSTFTGRVKESD 130
>gi|319649524|ref|ZP_08003680.1| hypothetical protein HMPREF1013_00284 [Bacillus sp. 2_A_57_CT2]
gi|317398686|gb|EFV79368.1| hypothetical protein HMPREF1013_00284 [Bacillus sp. 2_A_57_CT2]
Length = 155
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 43/88 (48%), Gaps = 15/88 (17%)
Query: 12 DIEAFCTTYRARLDEAEIAKS-IPENTSLEVSSPGVERVVRIPLELERFKDRAMYVKYVG 70
DIE C T RL E A+ IP N LEVSSPG ER PL K + +VK VG
Sbjct: 48 DIEE-CGTVSERLSEKLDAEDPIPYNYFLEVSSPGAER----PL-----KKDSDFVKAVG 97
Query: 71 ETV--TTGSPSESDGVFR--LISFDMET 94
+ V T P + + F L FD ET
Sbjct: 98 KNVFIKTYEPIDGEKTFEGVLTQFDGET 125
>gi|384045248|ref|YP_005493265.1| hypothetical protein BMWSH_1072 [Bacillus megaterium WSH-002]
gi|345442939|gb|AEN87956.1| hypothetical protein BMWSH_1072 [Bacillus megaterium WSH-002]
Length = 165
Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 40/86 (46%), Gaps = 11/86 (12%)
Query: 12 DIEAFCTTYRARLDE-AEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDRAMYVKYVG 70
DIE C +L E + IP N LEVSSPG ER ++ + ER + +Y+K
Sbjct: 58 DIED-CGAVSEKLSEKMDAVDPIPHNYFLEVSSPGAERPLKKDKDFERAIGKHVYIK--- 113
Query: 71 ETVTTGSPSESDGVF--RLISFDMET 94
T P E F L SFD ET
Sbjct: 114 ----TYEPIEGAKEFEGELQSFDGET 135
>gi|294500901|ref|YP_003564601.1| hypothetical protein BMQ_4155 [Bacillus megaterium QM B1551]
gi|294350838|gb|ADE71167.1| conserved hypothetical protein [Bacillus megaterium QM B1551]
Length = 156
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 40/86 (46%), Gaps = 11/86 (12%)
Query: 12 DIEAFCTTYRARLDE-AEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDRAMYVKYVG 70
DIE C +L E + IP N LEVSSPG ER ++ + ER + +Y+K
Sbjct: 49 DIED-CGAVSEKLSEKMDAVDPIPHNYFLEVSSPGAERPLKKDKDFERAIGKHVYIK--- 104
Query: 71 ETVTTGSPSESDGVF--RLISFDMET 94
T P E F L SFD ET
Sbjct: 105 ----TYEPIEGAKEFEGELQSFDGET 126
>gi|284048696|ref|YP_003399035.1| hypothetical protein Acfer_1360 [Acidaminococcus fermentans DSM
20731]
gi|283952917|gb|ADB47720.1| protein of unknown function DUF150 [Acidaminococcus fermentans DSM
20731]
Length = 153
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK-- 60
+K+G ++D A +LDE + I E LEVSSPG++R ++ +LE
Sbjct: 43 DKAGGIDIDDCSAVSNALAKKLDEEDF---IKEKYYLEVSSPGIDRPLKKDKDLEAHYGQ 99
Query: 61 --DRAMYVKYVGETVTTGSPSESDG 83
D A + Y G+ T D
Sbjct: 100 KVDLAFFAPYEGKKQLTAVLKSHDA 124
>gi|390934923|ref|YP_006392428.1| Ribosome maturation factor rimP [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389570424|gb|AFK86829.1| Ribosome maturation factor rimP [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 151
Score = 35.0 bits (79), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
+K G S++D + +LDE + I + LEVSSPG++R ++ + E+FK
Sbjct: 42 DKDGGVSLDDCQIISEYLSEKLDEVD---PIDNSYILEVSSPGIDRPLKTKRDFEKFK 96
>gi|156373004|ref|XP_001629324.1| predicted protein [Nematostella vectensis]
gi|156216322|gb|EDO37261.1| predicted protein [Nematostella vectensis]
Length = 629
Score = 35.0 bits (79), Expect = 9.1, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 13 IEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPL----ELERFKDRAMYVKY 68
+ FC ++ R+ E +I +SI ENTS E+ SP E VV+ + +L+ F R +
Sbjct: 242 LNTFCRDFQ-RVLETKITQSISENTSSEIESPIYEEVVQHMMFCQSKLDMFHGRQAVLNS 300
Query: 69 VGETVTTG 76
+G+ + G
Sbjct: 301 IGDYLREG 308
>gi|333897121|ref|YP_004470995.1| ribosome maturation factor rimP [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333112386|gb|AEF17323.1| Ribosome maturation factor rimP [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 151
Score = 35.0 bits (79), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERFK 60
+K G S++D + +LDE + I + LEVSSPG++R ++ + E+FK
Sbjct: 42 DKDGGVSLDDCQIISEYLSEKLDEVD---PIDNSYILEVSSPGIDRPLKTKRDFEKFK 96
>gi|295706247|ref|YP_003599322.1| hypothetical protein BMD_4142 [Bacillus megaterium DSM 319]
gi|294803906|gb|ADF40972.1| conserved hypothetical protein [Bacillus megaterium DSM 319]
Length = 156
Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 40/86 (46%), Gaps = 11/86 (12%)
Query: 12 DIEAFCTTYRARLDE-AEIAKSIPENTSLEVSSPGVERVVRIPLELERFKDRAMYVKYVG 70
DIE C +L E + IP N LEVSSPG ER ++ + ER + +Y+K
Sbjct: 49 DIED-CGAVSEKLSEKMDAVDPIPHNYFLEVSSPGAERPLKKDKDFERAIGKHVYIK--- 104
Query: 71 ETVTTGSPSESDGVF--RLISFDMET 94
T P E F L SFD ET
Sbjct: 105 ----TYEPIEGAKEFEGELQSFDGET 126
>gi|154497679|ref|ZP_02036057.1| hypothetical protein BACCAP_01655 [Bacteroides capillosus ATCC
29799]
gi|150273177|gb|EDN00322.1| hypothetical protein BACCAP_01655 [Pseudoflavonifractor
capillosus ATCC 29799]
Length = 151
Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEAEIAKSIPENTSLEVSSPGVERVVRIPLELERF 59
+K G +++D EA LDEA+ I + +LEVSS G++RV+R P + F
Sbjct: 42 DKEGGVNIDDCEAVSRPLSDALDEAD---PIEGSYTLEVSSAGIDRVLRHPEHFDAF 95
>gi|427407220|ref|ZP_18897425.1| hypothetical protein HMPREF9161_01785 [Selenomonas sp. F0473]
gi|425707695|gb|EKU70739.1| hypothetical protein HMPREF9161_01785 [Selenomonas sp. F0473]
Length = 166
Score = 35.0 bits (79), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 21/118 (17%)
Query: 3 NKSGSPSMEDIEAFCTTYRARLDEA-EIAKSIPENTSLEVSSPGVERVVRIPLELERFK- 60
+K +ED C T RL+E + I + LEVSSPG++RV+R P + +R +
Sbjct: 60 DKEAGIDIED----CRTLSERLEEILDREDFIADAYILEVSSPGLDRVLRKPRDFDRERG 115
Query: 61 ---DRAMYVKYVGETVTTGSPSESDGVFRLISFDMETECCTWGLADVRINREKAGKGR 115
D +Y + G+ TG + D ET G DVRI E+ + R
Sbjct: 116 KTVDVTLYAPHAGKKNFTGVLAGHD----------ETALILDG--DVRIPMEQVSQVR 161
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.131 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,133,904,193
Number of Sequences: 23463169
Number of extensions: 79454632
Number of successful extensions: 170924
Number of sequences better than 100.0: 204
Number of HSP's better than 100.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 136
Number of HSP's that attempted gapping in prelim test: 170803
Number of HSP's gapped (non-prelim): 206
length of query: 142
length of database: 8,064,228,071
effective HSP length: 106
effective length of query: 36
effective length of database: 9,872,099,453
effective search space: 355395580308
effective search space used: 355395580308
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 71 (32.0 bits)