BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032341
(142 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9MAS5|VA726_ARATH Putative vesicle-associated membrane protein 726 OS=Arabidopsis
thaliana GN=VAMP726 PE=3 SV=2
Length = 220
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 87/111 (78%), Positives = 98/111 (88%)
Query: 1 MSQKSLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVD 60
M Q+SLIY+FVARG V+LAEYTEF GNF S+A QCLQKLP+SNNKFTYNCD HTFNYL D
Sbjct: 1 MGQQSLIYSFVARGTVILAEYTEFKGNFTSVAAQCLQKLPSSNNKFTYNCDGHTFNYLAD 60
Query: 61 NGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFG 111
NG+TYCVV ES+GRQIPMAFLERVK++F +YGGGKA+TA AN LNKEFG
Sbjct: 61 NGFTYCVVVIESAGRQIPMAFLERVKEDFNKRYGGGKASTAKANSLNKEFG 111
>sp|P47192|VA722_ARATH Vesicle-associated membrane protein 722 OS=Arabidopsis thaliana
GN=VAMP722 PE=2 SV=2
Length = 221
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 86/111 (77%), Positives = 100/111 (90%)
Query: 1 MSQKSLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVD 60
M+Q+SLIY+FVARG V+L E+T+F GNF SIA QCLQKLP+SNNKFTYNCD HTFNYLV+
Sbjct: 1 MAQQSLIYSFVARGTVILVEFTDFKGNFTSIAAQCLQKLPSSNNKFTYNCDGHTFNYLVE 60
Query: 61 NGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFG 111
NG+TYCVVA +S+GRQIPMAFLERVK++F +YGGGKAATA AN LNKEFG
Sbjct: 61 NGFTYCVVAVDSAGRQIPMAFLERVKEDFNKRYGGGKAATAQANSLNKEFG 111
>sp|Q9ZTW3|VA721_ARATH Vesicle-associated membrane protein 721 OS=Arabidopsis thaliana
GN=VAMP721 PE=1 SV=1
Length = 219
Score = 188 bits (478), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 84/111 (75%), Positives = 100/111 (90%)
Query: 1 MSQKSLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVD 60
M+Q+SLIY+FVARG V+L E+T+F GNF SIA QCLQKLP+SNNKFTYNCD HTFNYLV+
Sbjct: 1 MAQQSLIYSFVARGTVILVEFTDFKGNFTSIAAQCLQKLPSSNNKFTYNCDGHTFNYLVE 60
Query: 61 NGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFG 111
+G+TYCVVA +S+GRQIPM+FLERVK++F +YGGGKAATA AN LNKEFG
Sbjct: 61 DGFTYCVVAVDSAGRQIPMSFLERVKEDFNKRYGGGKAATAQANSLNKEFG 111
>sp|O48850|VA725_ARATH Vesicle-associated membrane protein 725 OS=Arabidopsis thaliana
GN=VAMP725 PE=2 SV=2
Length = 285
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 84/111 (75%), Positives = 97/111 (87%)
Query: 1 MSQKSLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVD 60
M Q++LIY+FVARG V+L EYTEF GNF ++A QCLQKLP+SNNKFTYNCD HTFNYLV+
Sbjct: 66 MGQQNLIYSFVARGTVILVEYTEFKGNFTAVAAQCLQKLPSSNNKFTYNCDGHTFNYLVE 125
Query: 61 NGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFG 111
NG+TYCVVA ES GRQIPMAFLERVK++F +YGGGKA TA AN LN+EFG
Sbjct: 126 NGFTYCVVAVESVGRQIPMAFLERVKEDFNKRYGGGKATTAQANSLNREFG 176
>sp|Q8VY69|VA723_ARATH Vesicle-associated membrane protein 723 OS=Arabidopsis thaliana
GN=VAMP723 PE=2 SV=1
Length = 217
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 76/111 (68%), Positives = 94/111 (84%)
Query: 1 MSQKSLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVD 60
M+Q+SL Y+F+ARG V+L E+T+F GNF S+A Q L+ LP+SNNKFTYNCD HTFN LV+
Sbjct: 1 MAQQSLFYSFIARGTVILVEFTDFKGNFTSVAAQYLENLPSSNNKFTYNCDGHTFNDLVE 60
Query: 61 NGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFG 111
NG+TYCVVA +S+GR+IPMAFLERVK++F +YGG KAAT AN LNKEFG
Sbjct: 61 NGFTYCVVAVDSAGREIPMAFLERVKEDFYKRYGGEKAATDQANSLNKEFG 111
>sp|O23429|VA724_ARATH Vesicle-associated membrane protein 724 OS=Arabidopsis thaliana
GN=VAMP724 PE=2 SV=2
Length = 222
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 78/112 (69%), Positives = 94/112 (83%), Gaps = 1/112 (0%)
Query: 1 MSQKSLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNN-KFTYNCDAHTFNYLV 59
M Q+S IY+FVARG ++LAEYTEF+GNF SIA QCLQKLP+S+N KFTYNCD HTFN+LV
Sbjct: 1 MGQESFIYSFVARGTMILAEYTEFTGNFPSIAAQCLQKLPSSSNSKFTYNCDHHTFNFLV 60
Query: 60 DNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFG 111
++GY YCVVA +S +QI +AFLERVK +F +YGGGKA+TA A LNKEFG
Sbjct: 61 EDGYAYCVVAKDSLSKQISIAFLERVKADFKKRYGGGKASTAIAKSLNKEFG 112
>sp|Q9M376|VA727_ARATH Vesicle-associated membrane protein 727 OS=Arabidopsis thaliana
GN=VAMP727 PE=2 SV=1
Length = 240
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 61/93 (65%), Positives = 80/93 (86%)
Query: 1 MSQKSLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVD 60
MSQK LIY+FVA+G VVLAE+T +SGNF++IA QCLQKLP +++K+TY+CD HTFN+LVD
Sbjct: 1 MSQKGLIYSFVAKGTVVLAEHTPYSGNFSTIAVQCLQKLPTNSSKYTYSCDGHTFNFLVD 60
Query: 61 NGYTYCVVADESSGRQIPMAFLERVKDEFVSKY 93
NG+ + VVADES+GR +P FLERVK++F +Y
Sbjct: 61 NGFVFLVVADESTGRSVPFVFLERVKEDFKKRY 93
>sp|Q86AQ7|VAM7B_DICDI Vesicle-associated membrane protein 7B OS=Dictyostelium discoideum
GN=vamp7B PE=3 SV=1
Length = 260
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 70/109 (64%), Gaps = 1/109 (0%)
Query: 6 LIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYTY 65
+IY+ VARG+ VLAE+T +GNF +I + L +P ++ K +Y + + F+YLV + TY
Sbjct: 3 IIYSLVARGSSVLAEFTSTNGNFVTITRRILDLIPPNDTKMSYVYEKYIFHYLVSDTLTY 62
Query: 66 CVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGYSV 114
+ADE GR+IP FL+ VK+ F S Y G K TA A G+N +F ++
Sbjct: 63 LCMADEEFGRRIPFTFLDDVKNRFKSMY-GDKGKTAIAYGMNSDFSRTL 110
>sp|O49377|VA711_ARATH Vesicle-associated membrane protein 711 OS=Arabidopsis thaliana
GN=VAMP711 PE=2 SV=2
Length = 219
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 68/107 (63%), Gaps = 2/107 (1%)
Query: 5 SLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNK-FTYNCDAHTFNYLVDNGY 63
+++YA VARG VVL+E+T S N ++IA Q L+K+P N+ +Y+ D + F+ +G
Sbjct: 2 AILYALVARGTVVLSEFTATSTNASTIAKQILEKVPGDNDSNVSYSQDRYVFHVKRTDGL 61
Query: 64 TYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEF 110
T +A+E++GR+IP AFLE + FV YG TA A +N+EF
Sbjct: 62 TVLCMAEETAGRRIPFAFLEDIHQRFVRTYGRA-VHTALAYAMNEEF 107
>sp|Q9LFP1|VA713_ARATH Vesicle-associated membrane protein 713 OS=Arabidopsis thaliana
GN=VAMP713 PE=2 SV=1
Length = 221
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 67/109 (61%), Gaps = 3/109 (2%)
Query: 5 SLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPA--SNNKFTYNCDAHTFNYLVDNG 62
++I+A VARG VVL+E++ S N +SI+ Q L+KLP S++ +Y+ D + F+ +G
Sbjct: 2 AIIFALVARGTVVLSEFSATSTNASSISKQILEKLPGNDSDSHMSYSQDRYIFHVKRTDG 61
Query: 63 YTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFG 111
T +ADE++GR IP AFL+ + FV YG +A A +N EF
Sbjct: 62 LTVLCMADETAGRNIPFAFLDDIHQRFVKTYGRA-IHSAQAYSMNDEFS 109
>sp|Q9SIQ9|VA712_ARATH Vesicle-associated membrane protein 712 OS=Arabidopsis thaliana
GN=VAMP712 PE=3 SV=1
Length = 219
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 66/107 (61%), Gaps = 2/107 (1%)
Query: 5 SLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPAS-NNKFTYNCDAHTFNYLVDNGY 63
S++YA VARG VVLAE + S N ++IA Q L+K+P + ++ +Y+ D + F+ +G
Sbjct: 2 SILYALVARGTVVLAELSTTSTNASTIAKQILEKIPGNGDSHVSYSQDRYVFHVKRTDGL 61
Query: 64 TYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEF 110
T +ADE +GR+IP +FLE + FV YG +A A +N EF
Sbjct: 62 TVLCMADEDAGRRIPFSFLEDIHQRFVRTYGRA-IHSAQAYAMNDEF 107
>sp|Q9FMR5|VA714_ARATH Vesicle-associated membrane protein 714 OS=Arabidopsis thaliana
GN=VAMP714 PE=2 SV=1
Length = 221
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 67/109 (61%), Gaps = 3/109 (2%)
Query: 5 SLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPA--SNNKFTYNCDAHTFNYLVDNG 62
+++YA VARG VVLAE++ +GN ++ + L+KL S+ + ++ D + F+ L +G
Sbjct: 2 AIVYAVVARGTVVLAEFSAVTGNTGAVVRRILEKLSPEISDERLCFSQDRYIFHILRSDG 61
Query: 63 YTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFG 111
T+ +A+++ GR++P ++LE + F+ Y G A APA +N EF
Sbjct: 62 LTFLCMANDTFGRRVPFSYLEEIHMRFMKNY-GKVAHNAPAYAMNDEFS 109
>sp|P70280|VAMP7_MOUSE Vesicle-associated membrane protein 7 OS=Mus musculus GN=Vamp7 PE=1
SV=1
Length = 220
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
Query: 5 SLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYT 64
++++A VARG +LA++ GNF + Q L K+P+ NNK TY+ + F+Y+ +
Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIV 61
Query: 65 YCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFG 111
Y + D+ R +FL VK F + Y G +A TA +N EF
Sbjct: 62 YLCITDDDFERSRAFSFLNEVKKRFQTTY-GSRAQTALPYAMNSEFS 107
>sp|Q9JHW5|VAMP7_RAT Vesicle-associated membrane protein 7 OS=Rattus norvegicus GN=Vamp7
PE=1 SV=1
Length = 220
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 62/116 (53%), Gaps = 2/116 (1%)
Query: 5 SLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYT 64
++++A VARG +LA++ GNF + Q L K+P+ NNK TY+ + F+Y+ +
Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIV 61
Query: 65 YCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGYSVVILILK 120
Y + D+ R FL VK F + Y G +A TA +N EF SV+ LK
Sbjct: 62 YLCITDDDFERSRAFGFLNEVKKRFQTTY-GSRAQTALPYAMNSEFS-SVLAAQLK 115
>sp|P51809|VAMP7_HUMAN Vesicle-associated membrane protein 7 OS=Homo sapiens GN=VAMP7 PE=1
SV=3
Length = 220
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 62/116 (53%), Gaps = 2/116 (1%)
Query: 5 SLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYT 64
++++A VARG +LA++ GNF + Q L K+P+ NNK TY+ + F+Y+ +
Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIV 61
Query: 65 YCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGYSVVILILK 120
Y + D+ R FL +K F + Y G +A TA +N EF SV+ LK
Sbjct: 62 YLCITDDDFERSRAFNFLNEIKKRFQTTY-GSRAQTALPYAMNSEFS-SVLAAQLK 115
>sp|Q17QI5|VAMP7_BOVIN Vesicle-associated membrane protein 7 OS=Bos taurus GN=VAMP7 PE=2
SV=1
Length = 220
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 62/116 (53%), Gaps = 2/116 (1%)
Query: 5 SLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYT 64
++++A VARG +LA++ GNF + Q L K+P+ NNK TY+ + F+Y+ +
Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIV 61
Query: 65 YCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGYSVVILILK 120
Y + D+ R FL +K F + Y G +A TA +N EF SV+ LK
Sbjct: 62 YLCITDDDFERSRAFNFLNEIKKRFQTTY-GSRAQTALPYAMNSEFS-SVLAAQLK 115
>sp|Q5ZL74|VAMP7_CHICK Vesicle-associated membrane protein 7 OS=Gallus gallus GN=VAMP7
PE=2 SV=1
Length = 220
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 62/116 (53%), Gaps = 2/116 (1%)
Query: 5 SLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYT 64
++++A VARG +LA++ GNF + Q L K+P+ NNK TY+ + F+Y+ +
Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRII 61
Query: 65 YCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGYSVVILILK 120
Y + D+ R FL +K F + Y G +A TA +N EF SV+ LK
Sbjct: 62 YLCITDDDFERSRAFNFLNEIKKRFQTTY-GSRAQTALPYAMNSEFS-SVLAAQLK 115
>sp|Q5RF94|VAMP7_PONAB Vesicle-associated membrane protein 7 OS=Pongo abelii GN=VAMP7 PE=2
SV=3
Length = 220
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
Query: 5 SLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYT 64
++++A VARG +LA++ GNF + Q L K+P+ NNK TY + F+Y+ +
Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYPHGNYLFHYICQDRIV 61
Query: 65 YCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGYSVVILILK 120
Y + D+ R FL +K F + Y G +A TA +N EF SV+ LK
Sbjct: 62 YLCITDDDFERSRAFNFLNEIKKRFQTTY-GSRAQTALPYAMNSEFS-SVLAAQLK 115
>sp|Q54NW7|VAM7A_DICDI Vesicle-associated membrane protein 7A OS=Dictyostelium discoideum
GN=vamp7A PE=1 SV=1
Length = 216
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
Query: 1 MSQKSLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVD 60
MSQ ++YA V+ V L E+ +GNF +A + + K+P ++ K Y + H F+Y+ +
Sbjct: 1 MSQTDILYACVSYKGVCLVEHKIANGNFIDLARRLITKIPPTSKKI-YTSENHNFHYISE 59
Query: 61 NGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPA 103
N + + E G QIP FL ++ +F+ YG + +P
Sbjct: 60 NDLAFLCLCHEKLGVQIPSEFLSDIRQQFIRSYGQSFSQNSPT 102
>sp|Q9Y7L0|SEC22_SCHPO Protein transport protein sec22 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=sec22 PE=3 SV=2
Length = 215
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 36 LQKL-PASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYG 94
L++L P S + + +TF+YL+DNG Y + ++S R++ ++LE + EF + +G
Sbjct: 39 LKRLSPTSEKRASIESGDYTFHYLIDNGICYLCICEQSYPRKLAFSYLEELAGEFWNSFG 98
>sp|Q84WF5|VAMPL_ARATH Probable VAMP-like protein At1g33475 OS=Arabidopsis thaliana
GN=At1g33475 PE=2 SV=1
Length = 255
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 3 QKSLIYAFVARGNVVLAEYTEFSGNFN--SIAYQCLQKLPASNNKFTYNCDAHTFNYLVD 60
Q ++ Y V+R N ++ Y + N S+A CL+K P + + TF +L+
Sbjct: 5 QNTVHYCCVSRDNQIMYAYNNAGDHRNNESLAALCLEKTPPFHKWYFETRGKKTFGFLMK 64
Query: 61 NGYTYCVVADESSGRQIPMAFLERVKDEF 89
+ + Y + D+ + + FLE+++DE
Sbjct: 65 DDFVYFAIVDDVFKKSSVLDFLEKLRDEL 93
>sp|Q4KM74|SC22B_RAT Vesicle-trafficking protein SEC22b OS=Rattus norvegicus GN=Sec22b
PE=1 SV=3
Length = 215
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 27 NFNSIAYQCLQKL-PASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERV 85
+ S A Q +KL S + T A TF+Y+++ G Y V+ + + +++ A+LE +
Sbjct: 32 QYQSQAKQLFRKLNEQSPTRCTLEAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDL 91
Query: 86 KDEFVSKYG 94
EF ++G
Sbjct: 92 HSEFDEQHG 100
>sp|Q5RAI9|SC22B_PONAB Vesicle-trafficking protein SEC22b OS=Pongo abelii GN=SEC22B PE=2
SV=3
Length = 215
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 27 NFNSIAYQCLQKL-PASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERV 85
+ S A Q +KL S + T A TF+Y+++ G Y V+ + + +++ A+LE +
Sbjct: 32 QYQSQAKQLFRKLNEQSPTRCTLEAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDL 91
Query: 86 KDEFVSKYG 94
EF ++G
Sbjct: 92 HSEFDEQHG 100
>sp|O08547|SC22B_MOUSE Vesicle-trafficking protein SEC22b OS=Mus musculus GN=Sec22b PE=1
SV=3
Length = 215
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 27 NFNSIAYQCLQKL-PASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERV 85
+ S A Q +KL S + T A TF+Y+++ G Y V+ + + +++ A+LE +
Sbjct: 32 QYQSQAKQLFRKLNEQSPTRCTLEAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDL 91
Query: 86 KDEFVSKYG 94
EF ++G
Sbjct: 92 HSEFDEQHG 100
>sp|O08595|SC22B_CRIGR Vesicle-trafficking protein SEC22b OS=Cricetulus griseus GN=Sec22b
PE=1 SV=3
Length = 215
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 27 NFNSIAYQCLQKL-PASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERV 85
+ S A Q +KL S + T A TF+Y+++ G Y V+ + + +++ A+LE +
Sbjct: 32 QYQSQAKQLFRKLNEQSPTRCTLGAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDL 91
Query: 86 KDEFVSKYG 94
EF ++G
Sbjct: 92 HSEFDEQHG 100
>sp|Q5ZJW4|SC22B_CHICK Vesicle-trafficking protein SEC22b OS=Gallus gallus GN=SEC22B PE=2
SV=1
Length = 215
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 27 NFNSIAYQCLQKL-PASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERV 85
+ S A Q +KL S + T A F+Y+++ G Y V+ + + +++ A+LE +
Sbjct: 32 QYQSQAKQLFRKLNEQSPTRCTLEAGAMAFHYIIEKGVCYLVLCEAAFPKKLAFAYLEDL 91
Query: 86 KDEFVSKYG 94
+ EF ++G
Sbjct: 92 QSEFDEQHG 100
>sp|Q7SXP0|S22BB_DANRE Vesicle-trafficking protein SEC22b-B OS=Danio rerio GN=sec22bb PE=2
SV=1
Length = 215
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 27 NFNSIAYQCLQKL-PASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERV 85
+ S A Q +KL S N+ T + +F+Y+++ G Y V+ + +++ A+LE +
Sbjct: 32 QYQSQAKQLFRKLNEQSPNRCTLEAGSMSFHYVIEKGVCYLVLCEAGFPKKLAFAYLEDL 91
Query: 86 KDEFVSKYG 94
+ EF ++G
Sbjct: 92 QAEFHEQHG 100
>sp|Q6P7L4|SC22B_XENTR Vesicle-trafficking protein SEC22b OS=Xenopus tropicalis GN=sec22b
PE=2 SV=1
Length = 215
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 27 NFNSIAYQCLQKL-PASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERV 85
+ + A Q +KL S + T A TF+YL++ G Y V+ + + +++ A+LE +
Sbjct: 32 QYQNQAKQLFRKLNEQSPTRCTLEAGAMTFHYLIEKGVCYLVLCEAAFPKKLAFAYLEDL 91
Query: 86 KDEFVSKYG 94
EF ++G
Sbjct: 92 FSEFDEQHG 100
>sp|O75396|SC22B_HUMAN Vesicle-trafficking protein SEC22b OS=Homo sapiens GN=SEC22B PE=1
SV=4
Length = 215
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 27 NFNSIAYQCLQKL-PASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERV 85
+ S A Q +KL S + T A TF+Y+++ G V+ + + + + A+LE +
Sbjct: 32 QYQSQAKQLFRKLNEQSPTRCTLEAGAMTFHYIIEQGVCDLVLCEAAFPKTLAFAYLEDL 91
Query: 86 KDEFVSKYG 94
EF ++G
Sbjct: 92 HSEFDEQHG 100
>sp|Q6CJA0|SEC22_KLULA Protein transport protein SEC22 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=SEC22 PE=3 SV=1
Length = 214
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%)
Query: 40 PASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGG 95
P S N+ T +Y+ N Y VVA+ + R + ++L ++ EF YGG
Sbjct: 43 PTSANEATVESGDFEIHYIRLNTVVYIVVAERNYPRNLAFSYLADIQQEFEHSYGG 98
>sp|Q74ZD2|SEC22_ASHGO Protein transport protein SEC22 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SEC22
PE=3 SV=2
Length = 214
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 25/55 (45%)
Query: 40 PASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYG 94
P S N+ T A+ +Y+ Y V+ + R + A+L V+ EF YG
Sbjct: 43 PQSANEATLESGAYEMHYVRQQSVVYIVIVERGYPRNLAFAYLADVRHEFEHSYG 97
>sp|Q642F4|SC22A_RAT Vesicle-trafficking protein SEC22a OS=Rattus norvegicus GN=Sec22a
PE=2 SV=1
Length = 307
Score = 32.3 bits (72), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 32/65 (49%)
Query: 37 QKLPASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGG 96
+KL ++ T H N++ G +Y ++ E+ + +FL+ ++ EF++ Y
Sbjct: 42 RKLAQFPDRCTLKTGRHNINFISSLGVSYMMLCTENYPNVLAFSFLDELQKEFITTYNMM 101
Query: 97 KAATA 101
K TA
Sbjct: 102 KTNTA 106
>sp|Q7ZV15|S22BA_DANRE Vesicle-trafficking protein SEC22b-A OS=Danio rerio GN=sec22ba PE=2
SV=1
Length = 215
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 27 NFNSIAYQCLQKL-PASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERV 85
+ S A Q +KL S + T F+Y+++ G Y + + +++ A+LE +
Sbjct: 32 KYQSQAKQLCRKLNEQSPARCTLEAGKMCFHYVIEKGVCYLALCEAGFPKKLAFAYLEDL 91
Query: 86 KDEFVSKYGG 95
+ EF +YG
Sbjct: 92 EGEFSEQYGA 101
>sp|Q9ZCQ4|FUMC_RICPR Fumarate hydratase class II OS=Rickettsia prowazekii (strain Madrid
E) GN=fumC PE=1 SV=1
Length = 461
Score = 30.8 bits (68), Expect = 2.5, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 10/87 (11%)
Query: 37 QKLPASNNKFTYNCD-AHTFNYLVDNGYTYC------VVADESSG--RQIPMAFLERVKD 87
Q +PA NN TY D + ++ ++ G T+ + E SG QI A LER++D
Sbjct: 159 QLIPALNNLLTYLQDKSKDWDKIIKIGRTHLQDATPLTLKQEFSGYITQIEYA-LERIED 217
Query: 88 EFVSKYGGGKAATAPANGLNKEFGYSV 114
Y + TA G+N + G+ +
Sbjct: 218 ALKKVYLLAQGGTAVGTGINSKIGFDI 244
>sp|Q68W74|FUMC_RICTY Fumarate hydratase class II OS=Rickettsia typhi (strain ATCC VR-144
/ Wilmington) GN=fumC PE=3 SV=1
Length = 461
Score = 30.8 bits (68), Expect = 2.7, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 10/87 (11%)
Query: 37 QKLPASNNKFTYNCD-AHTFNYLVDNGYTYC------VVADESSG--RQIPMAFLERVKD 87
Q +PA NN TY D + ++ ++ G T+ + E SG QI A LER++D
Sbjct: 159 QLIPALNNLLTYLQDKSKDWDKIIKIGRTHLQDATPLTLKQEFSGYITQIEYA-LERIED 217
Query: 88 EFVSKYGGGKAATAPANGLNKEFGYSV 114
Y + TA G+N + G+ +
Sbjct: 218 ALKKVYLLAQGGTAVGTGINSKIGFDI 244
>sp|Q8BH47|SC22A_MOUSE Vesicle-trafficking protein SEC22a OS=Mus musculus GN=Sec22a PE=2
SV=1
Length = 307
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 15/65 (23%), Positives = 32/65 (49%)
Query: 37 QKLPASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGG 96
+KL ++ T + N++ G +Y ++ E+ + +FL+ ++ EF++ Y
Sbjct: 42 RKLAQFPDRCTLKTGRYNINFISSLGVSYMMLCSENYPNVLAFSFLDELQKEFITTYNMM 101
Query: 97 KAATA 101
K TA
Sbjct: 102 KTNTA 106
>sp|Q96IW7|SC22A_HUMAN Vesicle-trafficking protein SEC22a OS=Homo sapiens GN=SEC22A PE=1
SV=1
Length = 307
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 15/65 (23%), Positives = 32/65 (49%)
Query: 37 QKLPASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGG 96
+KL ++ T + N++ G +Y ++ E+ + +FL+ ++ EF++ Y
Sbjct: 42 RKLAQLPDRCTLKTGHYNINFISSLGVSYMMLCTENYPNVLAFSFLDELQKEFITTYNMM 101
Query: 97 KAATA 101
K TA
Sbjct: 102 KTNTA 106
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,456,174
Number of Sequences: 539616
Number of extensions: 2105474
Number of successful extensions: 4654
Number of sequences better than 100.0: 41
Number of HSP's better than 100.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 4611
Number of HSP's gapped (non-prelim): 41
length of query: 142
length of database: 191,569,459
effective HSP length: 105
effective length of query: 37
effective length of database: 134,909,779
effective search space: 4991661823
effective search space used: 4991661823
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)