BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032342
(142 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 23 KSVEEIFAALDLNNDGVLSRSELRKAF-ESMRLIETHFGVD----VATPPEQLTKLYDSI 77
K + EIF LD NNDG+L R EL + + E MRL GVD + + DS+
Sbjct: 331 KQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLK----GVDSNSLIQNEGSTIEDQIDSL 386
Query: 78 FEKFDLDSSGSIDLHEFSA 96
D+D SGSI+ EF A
Sbjct: 387 MPLLDMDGSGSIEYSEFIA 405
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 13/70 (18%)
Query: 26 EEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSIFEKFDLDS 85
E +F LD N DG +S E++ S R I+ EQL +L IF+ D+D
Sbjct: 3 EALFKQLDANGDGSVSYEEVKAFVSSKRPIKN----------EQLLQL---IFKAIDIDG 49
Query: 86 SGSIDLHEFS 95
+G IDL EF+
Sbjct: 50 NGEIDLAEFT 59
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 22 KKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSIFEKF 81
+K + +IF LD N DG L + EL + + +R + G ++ E++ D+I ++
Sbjct: 354 RKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELG-ELKNVEEEV----DNILKEV 408
Query: 82 DLDSSGSIDLHEF 94
D D +G I+ EF
Sbjct: 409 DFDKNGYIEYSEF 421
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 29 FAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSIFEKFDLDSSGS 88
F D ++DG L+R +L + + T G D ++ +L D+I E+ D+D G+
Sbjct: 135 FRIFDFDDDGTLNREDLSRLVNCL----TGEGEDTRLSASEMKQLIDNILEESDIDRDGT 190
Query: 89 IDLHEF 94
I+L EF
Sbjct: 191 INLSEF 196
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 29 FAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSIFEKFDLDSSGS 88
F D ++DG L+R +L + + T G D ++ +L D+I E+ D+D G+
Sbjct: 104 FRIFDFDDDGTLNREDLSRLVNCL----TGEGEDTRLSASEMKQLIDNILEESDIDRDGT 159
Query: 89 IDLHEF 94
I+L EF
Sbjct: 160 INLSEF 165
>pdb|3LI6|A Chain A, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|D Chain D, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|G Chain G, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|J Chain J, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
Length = 66
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 13/70 (18%)
Query: 26 EEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSIFEKFDLDS 85
E +F +D+N DG +S E+ KAF S + A EQL +L IF+ D D
Sbjct: 3 EALFKEIDVNGDGAVSYEEV-KAFVSKKR---------AIKNEQLLQL---IFKSIDADG 49
Query: 86 SGSIDLHEFS 95
+G ID +EF+
Sbjct: 50 NGEIDQNEFA 59
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium
Bound Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 13/70 (18%)
Query: 26 EEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSIFEKFDLDS 85
E +F +D+N DG +S E+ KAF S + A EQL +L IF+ D D
Sbjct: 3 EALFKEIDVNGDGAVSYEEV-KAFVSKKR---------AIKNEQLLQL---IFKSIDADG 49
Query: 86 SGSIDLHEFS 95
+G ID +EF+
Sbjct: 50 NGEIDQNEFA 59
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 13/70 (18%)
Query: 26 EEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSIFEKFDLDS 85
E +F +D+N DG +S E+ KAF S + A EQL +L IF+ D D
Sbjct: 3 EALFKEIDVNGDGAVSYEEV-KAFVSKKR---------AIKNEQLLQL---IFKSIDADG 49
Query: 86 SGSIDLHEFS 95
+G ID +EF+
Sbjct: 50 NGEIDQNEFA 59
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 35.0 bits (79), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 12/87 (13%)
Query: 15 VNEEEQFKKSVEEI-FAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKL 73
++++ KK V I F D++ +G +S EL++ F G D P + K
Sbjct: 120 IDKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRIF----------GRDDIENP-LIDKA 168
Query: 74 YDSIFEKFDLDSSGSIDLHEFSAEMKK 100
DS+ ++ DL+ G ID HEF M K
Sbjct: 169 IDSLLQEVDLNGDGEIDFHEFMLMMSK 195
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 34.3 bits (77), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 8/73 (10%)
Query: 29 FAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSIFEKFDLDSSGS 88
F DL+ DG +SR E+ + +RL+ V V EQL + D ++ D D G+
Sbjct: 120 FQLYDLDRDGKISRHEM---LQVLRLM-----VGVQVTEEQLENIADRTVQEADEDGDGA 171
Query: 89 IDLHEFSAEMKKI 101
+ EF+ ++K+
Sbjct: 172 VSFVEFTKSLEKM 184
Score = 26.9 bits (58), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 34/93 (36%), Gaps = 17/93 (18%)
Query: 2 GVVIIDGSTVRDFVNEEEQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGV 61
VI DG ++R + + F ALD N G LSR +L++ G
Sbjct: 8 AAVIPDGDSIRRETGFSQASLLRLHHRFRALDRNKKGYLSRMDLQQ-----------IGA 56
Query: 62 DVATPPEQLTKLYDSIFEKFDLDSSGSIDLHEF 94
P L D I E F D S +D F
Sbjct: 57 LAVNP------LGDRIIESFFPDGSQRVDFPGF 83
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 33.9 bits (76), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Query: 23 KSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSIFEKFD 82
K + +IF LD N DG L R EL + + + + D+ + Q+ D I + D
Sbjct: 40 KELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSS--QIEAEVDHILQSVD 97
Query: 83 LDSSGSIDLHEF 94
D +G I+ EF
Sbjct: 98 FDRNGYIEYSEF 109
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 33.5 bits (75), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 10/88 (11%)
Query: 29 FAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLT--KLYDSIFEKFDLDSS 86
F DL+NDG ++R+E+ ++ I G V P E+ T K D IF D ++
Sbjct: 105 FKLYDLDNDGYITRNEMLDIVDA---IYQMVGNTVELPEEENTPEKRVDRIFAMMDKNAD 161
Query: 87 GSIDLHEFSAEMKK-----IMLAIADGL 109
G + L EF K L++ DGL
Sbjct: 162 GKLTLQEFQEGSKADPSIVQALSLYDGL 189
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 33.5 bits (75), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Query: 23 KSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSIFEKFD 82
K + +IF LD N DG L R EL + + + + D+ + Q+ D I + D
Sbjct: 314 KELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSS--QIEAEVDHILQSVD 371
Query: 83 LDSSGSIDLHEF 94
D +G I+ EF
Sbjct: 372 FDRNGYIEYSEF 383
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 32.7 bits (73), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Query: 23 KSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSIFEKFD 82
+ + F D++ +G + R EL +++R I + A E+ T + +F+K D
Sbjct: 88 QKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINR---CNEAMTAEEFTNM---VFDKID 141
Query: 83 LDSSGSIDLHEFSAEMKK 100
++ G + L EF ++K
Sbjct: 142 INGDGELSLEEFMEGVQK 159
Score = 27.3 bits (59), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 59 FGVDVATPPEQLTKLYDSIFEKFDLDSSGSIDLHEFSAEMKKIMLAIAD 107
FG+ +P K + +FE FD + G ID E+ A + ++ D
Sbjct: 41 FGLKNLSPSA--NKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVD 87
Score = 26.9 bits (58), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 40/98 (40%), Gaps = 18/98 (18%)
Query: 23 KSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSIFEKFD 82
K VE++F D N DG + E A + + +Q + Y F+ +D
Sbjct: 52 KYVEQMFETFDFNKDGYIDFMEYVAALSLV----------LKGKVDQKLRWY---FKLYD 98
Query: 83 LDSSGSIDLHEFSAEMKKIMLAIADGLGSCPIQMALED 120
+D +G ID E+ I+ AI + C M E+
Sbjct: 99 VDGNGCID----RGELLNIIKAIR-AINRCNEAMTAEE 131
>pdb|2KHN|A Chain A, Nmr Solution Structure Of The Eh 1 Domain From Human
Intersectin-1 Protein. Northeast Structural Genomics
Consortium Target Hr3646e
Length = 121
Score = 32.7 bits (73), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 31/62 (50%)
Query: 6 IDGSTVRDFVNEEEQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVAT 65
I G R+F + + + +I+A D+NNDG + + E A + ++L + + A
Sbjct: 49 ITGDQARNFFFQSGLPQPVLAQIWALADMNNDGRMDQVEFSIAMKLIKLKLQGYQLPSAL 108
Query: 66 PP 67
PP
Sbjct: 109 PP 110
>pdb|2PMY|A Chain A, Ef-Hand Domain Of Human Rasef
pdb|2PMY|B Chain B, Ef-Hand Domain Of Human Rasef
Length = 91
Score = 32.3 bits (72), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 15/71 (21%)
Query: 25 VEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSIFEKFDLD 84
+ +FAA D N G L R E R +R+ P + +++F++ D D
Sbjct: 29 LRSVFAACDANRSGRLEREEFRALCTELRV----------RPADA-----EAVFQRLDAD 73
Query: 85 SSGSIDLHEFS 95
G+I EF+
Sbjct: 74 RDGAITFQEFA 84
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 32.3 bits (72), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 23 KSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSIFEKFD 82
K + +IF +D N DG L R EL + + E V V P Q+ D+I D
Sbjct: 63 KELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEE----VAVFDLP-QIESEVDAILGAAD 117
Query: 83 LDSSGSIDLHEF 94
D +G ID EF
Sbjct: 118 FDRNGYIDYSEF 129
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 31.6 bits (70), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 7/73 (9%)
Query: 23 KSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVAT-PPEQLTKLYDSIFEKF 81
K + +IF +D N DG L R EL + + G +VA Q+ D+I
Sbjct: 346 KELTDIFRHIDKNGDGQLDRQELIDGYSKLS------GEEVAVFDLPQIESEVDAILGAA 399
Query: 82 DLDSSGSIDLHEF 94
D D +G ID EF
Sbjct: 400 DFDRNGYIDYSEF 412
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 31.2 bits (69), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 14/85 (16%)
Query: 18 EEQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSI 77
EEQ + +E F+ D + DG ++ EL S+ L P E +L D I
Sbjct: 6 EEQIAE-FKEAFSLYDKDGDGTITTKELGTVMRSLGL----------NPTE--AELQDMI 52
Query: 78 FEKFDLDSSGSIDLHEFSAEMKKIM 102
E D D +G+ID EF M +IM
Sbjct: 53 NE-VDADGNGTIDFPEFLTMMARIM 76
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 31.2 bits (69), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 12/78 (15%)
Query: 23 KSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSIFEKFD 82
K + + F D N DG +S SELR+A ++ G V + + I D
Sbjct: 88 KELRDAFREFDTNGDGEISTSELREAMRAL------LGHQVG------HRDIEEIIRDVD 135
Query: 83 LDSSGSIDLHEFSAEMKK 100
L+ G +D EF M +
Sbjct: 136 LNGDGRVDFEEFVRMMSR 153
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 31.2 bits (69), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 31/72 (43%), Gaps = 13/72 (18%)
Query: 23 KSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSIFEKFD 82
+ + E F D + +G +S+ EL A S+ + ++V I ++ D
Sbjct: 36 EEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEV-------------IIQRLD 82
Query: 83 LDSSGSIDLHEF 94
+D G +D EF
Sbjct: 83 MDGDGQVDFEEF 94
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 30.8 bits (68), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 23 KSVEEIFAALDLNNDGVLSRSELRKAF-ESMRLIETHFGVDVATPPEQLTKLYDSIFEKF 81
K + IF +D N DG L R+EL + + E MR+ + A+ E D + +
Sbjct: 358 KELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEV---DQVLDAV 414
Query: 82 DLDSSGSIDLHEF 94
D D +G I+ EF
Sbjct: 415 DFDKNGYIEYSEF 427
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 30.8 bits (68), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 23 KSVEEIFAALDLNNDGVLSRSELRKAF-ESMRLIETHFGVDVATPPEQLTKLYDSIFEKF 81
K + IF +D N DG L R+EL + + E MR+ + A+ E D + +
Sbjct: 359 KELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEV---DQVLDAV 415
Query: 82 DLDSSGSIDLHEF 94
D D +G I+ EF
Sbjct: 416 DFDKNGYIEYSEF 428
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 30.8 bits (68), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 23 KSVEEIFAALDLNNDGVLSRSELRKAF-ESMRLIETHFGVDVATPPEQLTKLYDSIFEKF 81
K + IF +D N DG L R+EL + + E MR+ + A+ E D + +
Sbjct: 335 KELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEV---DQVLDAV 391
Query: 82 DLDSSGSIDLHEF 94
D D +G I+ EF
Sbjct: 392 DFDKNGYIEYSEF 404
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 30.8 bits (68), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 12/78 (15%)
Query: 23 KSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSIFEKFD 82
K + + F D N DG +S SELR+A + G V + + I D
Sbjct: 102 KELRDAFREFDTNGDGEISTSELREAMRKL------LGHQVG------HRDIEEIIRDVD 149
Query: 83 LDSSGSIDLHEFSAEMKK 100
L+ G +D EF M +
Sbjct: 150 LNGDGRVDFEEFVRMMSR 167
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 30.4 bits (67), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 12/78 (15%)
Query: 23 KSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSIFEKFD 82
K + + F D N DG +S SELR+A + G V + + I D
Sbjct: 88 KELRDAFREFDTNGDGEISTSELREAMRKL------LGHQVG------HRDIEEIIRDVD 135
Query: 83 LDSSGSIDLHEFSAEMKK 100
L+ G +D EF M +
Sbjct: 136 LNGDGRVDFEEFVRMMSR 153
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 30.4 bits (67), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 12/78 (15%)
Query: 23 KSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSIFEKFD 82
K + + F D N DG +S SELR E+MR + H + + + I D
Sbjct: 7 KELRDAFREFDTNGDGEISTSELR---EAMRKLLGH---------QVGHRDIEEIIRDVD 54
Query: 83 LDSSGSIDLHEFSAEMKK 100
L+ G +D EF M +
Sbjct: 55 LNGDGRVDFEEFVRMMSR 72
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 30.4 bits (67), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 13/79 (16%)
Query: 24 SVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSIFEKFDL 83
S + +F D N DG LS E R+ V +A P + FE+ D+
Sbjct: 2 SAKRVFEKFDKNKDGKLSLDEFRE-------------VALAFSPYFTQEDIVKFFEEIDV 48
Query: 84 DSSGSIDLHEFSAEMKKIM 102
D +G ++ EF++ ++K++
Sbjct: 49 DGNGELNADEFTSCIEKML 67
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 30.4 bits (67), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 18 EEQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSI 77
+E+ ++ ++ F D + +G + ++EL F +++ + PE+ L +
Sbjct: 88 QEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQ----QTLSPEEFINL---V 140
Query: 78 FEKFDLDSSGSIDLHEFSAEMKK 100
F K D+++ G + L EF M K
Sbjct: 141 FHKIDINNDGELTLEEFINGMAK 163
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 30.0 bits (66), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 14/70 (20%)
Query: 25 VEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSIFEKFDLD 84
+E IF D N DG +S SEL A ++ +T +++ ++ I D D
Sbjct: 4 MERIFKRFDTNGDGKISLSELTDALRTLG----------STSADEVQRMMAEI----DTD 49
Query: 85 SSGSIDLHEF 94
G ID +EF
Sbjct: 50 GDGFIDFNEF 59
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 30.0 bits (66), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 14/70 (20%)
Query: 25 VEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSIFEKFDLD 84
+E IF D N DG +S SEL A ++ +T +++ ++ I D D
Sbjct: 5 MERIFKRFDTNGDGKISLSELTDALRTLG----------STSADEVQRMMAEI----DTD 50
Query: 85 SSGSIDLHEF 94
G ID +EF
Sbjct: 51 GDGFIDFNEF 60
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 30.0 bits (66), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 19 EQFKKSVEEIFAALDLNNDGVLSRSELRKAFESM 52
E+ K+ + E F+ D+NNDG L EL+ A +++
Sbjct: 19 EEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKAL 52
Score = 25.8 bits (55), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 68 EQLTKLYDSIFEKFDLDSSGSIDLHEFSAEMKKI 101
EQ ++Y++ F FD+++ G +D HE MK +
Sbjct: 20 EQKQEIYEA-FSLFDMNNDGFLDYHELKVAMKAL 52
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 29.6 bits (65), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 13/67 (19%)
Query: 29 FAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSIFEKFDLDSSGS 88
F A D + DG ++ ELR+A G+ P E+L D++ + D+D G
Sbjct: 12 FRAFDQDGDGHITVDELRRAMA---------GLGQPLPQEEL----DAMIREADVDQDGR 58
Query: 89 IDLHEFS 95
++ EF+
Sbjct: 59 VNYEEFA 65
>pdb|2SAS|A Chain A, Structure Of A Sarcoplasmic Calcium-Binding Protein From
Amphioxus Refined At 2.4 Angstroms Resolution
Length = 185
Score = 29.3 bits (64), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 4/75 (5%)
Query: 33 DLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSIFEKFDLDSSGSIDLH 92
D+N D V+S E +E + I T VA P +F+ D+ G +DL
Sbjct: 70 DINKDDVVSWEEYLAMWE--KTIATC--KSVADLPAWCQNRIPFLFKGMDVSGDGIVDLE 125
Query: 93 EFSAEMKKIMLAIAD 107
EF K L AD
Sbjct: 126 EFQNYCKNFQLQCAD 140
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 29.3 bits (64), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 14/81 (17%)
Query: 15 VNEEEQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLY 74
++ Q K E IF D N DG +S +EL +A +++ I P+++ +
Sbjct: 1 ADDHPQDKAERERIFKRFDANGDGKISAAELGEALKTLGSI----------TPDEVKHMM 50
Query: 75 DSIFEKFDLDSSGSIDLHEFS 95
I D D G I EF+
Sbjct: 51 AEI----DTDGDGFISFQEFT 67
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 29.3 bits (64), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 19/94 (20%)
Query: 11 VRDFVNEEE--QFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPE 68
RD + EE+ +FK E F+ D + DG ++ EL S+ P E
Sbjct: 301 TRDQLTEEQIAEFK----EAFSLFDKDGDGTITTKELGTVMRSLG----------QNPTE 346
Query: 69 QLTKLYDSIFEKFDLDSSGSIDLHEFSAEMKKIM 102
+L D I E D D +G+ID EF M + M
Sbjct: 347 --AELQDMINE-VDADGNGTIDFPEFLTMMARWM 377
>pdb|3FIA|A Chain A, Crystal Structure Of The Eh 1 Domain From Human
Intersectin- 1 Protein. Northeast Structural Genomics
Consortium Target Hr3646e
Length = 121
Score = 28.9 bits (63), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 29/62 (46%)
Query: 6 IDGSTVRDFVNEEEQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVAT 65
I G R+F + + + +I+A D NNDG + E A + ++L + + A
Sbjct: 49 ITGDQARNFFFQSGLPQPVLAQIWALADXNNDGRXDQVEFSIAXKLIKLKLQGYQLPSAL 108
Query: 66 PP 67
PP
Sbjct: 109 PP 110
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 28.9 bits (63), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 15/69 (21%)
Query: 26 EEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSIFEKFDLDS 85
+ +F D +N G++ ++EL++A RL + + +D + KFD
Sbjct: 74 QNVFRTYDRDNSGMIDKNELKQALSGYRLSD---------------QFHDILIRKFDRQG 118
Query: 86 SGSIDLHEF 94
G I +F
Sbjct: 119 RGQIAFDDF 127
>pdb|2E7Z|A Chain A, Acetylene Hydratase From Pelobacter Acetylenicus
Length = 727
Score = 28.9 bits (63), Expect = 1.1, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Query: 44 ELRKAFESMRLIETHFG---VDVATPPEQLTKLYDSIFEKFDLD 84
E +K + M + +FG V VATP ++ +LY S+FEK D
Sbjct: 530 EYQKQYTYMSKLPDYFGPEGVGVATPSGKV-ELYSSVFEKLGYD 572
>pdb|1QXP|A Chain A, Crystal Structure Of A Mu-Like Calpain
pdb|1QXP|B Chain B, Crystal Structure Of A Mu-Like Calpain
Length = 900
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/20 (60%), Positives = 15/20 (75%)
Query: 74 YDSIFEKFDLDSSGSIDLHE 93
Y +IF KFDLD SGS+ +E
Sbjct: 609 YLTIFRKFDLDKSGSMSAYE 628
>pdb|2W4A|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 150
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 26 EEIFAALDLNNDGVLSRSELRKAFESM 52
+E F +D N DG++ + +LR+ F +M
Sbjct: 15 KEAFTVIDQNRDGIIDKDDLRETFAAM 41
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 10/88 (11%)
Query: 29 FAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLT--KLYDSIFEKFDLDSS 86
F DL+N+G++S E+ + ++ I G V P ++ T K + IF D +
Sbjct: 105 FQLYDLDNNGLISYDEMLRIVDA---IYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKD 161
Query: 87 GSIDLHEFSAEMKK-----IMLAIADGL 109
G + L EF K+ L++ DGL
Sbjct: 162 GQLTLEEFCEGSKRDPTIVSALSLYDGL 189
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 14/70 (20%)
Query: 26 EEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSIFEKFDLDS 85
E IF D N DG +S SEL A +++ + P+++ ++ I D D
Sbjct: 14 ERIFKRFDTNGDGKISSSELGDALKTLGSV----------TPDEVRRMMAEI----DTDG 59
Query: 86 SGSIDLHEFS 95
G I EF+
Sbjct: 60 DGFISFDEFT 69
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 19/94 (20%)
Query: 11 VRDFVNEEE--QFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPE 68
RD + EE+ +FK E F+ D + DG ++ EL S+ P E
Sbjct: 302 TRDQLTEEQIAEFK----EAFSLFDKDGDGTITTKELGTVMRSLG----------QNPTE 347
Query: 69 QLTKLYDSIFEKFDLDSSGSIDLHEFSAEMKKIM 102
+L D I E D D +G+ID EF M + M
Sbjct: 348 --AELQDMINE-VDADGNGTIDFPEFLTMMARKM 378
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 19/94 (20%)
Query: 11 VRDFVNEEE--QFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPE 68
RD + EE+ +FK E F+ D + DG ++ EL S+ P E
Sbjct: 301 TRDQLTEEQIAEFK----EAFSLFDKDGDGTITTKELGTVMRSLG----------QNPTE 346
Query: 69 QLTKLYDSIFEKFDLDSSGSIDLHEFSAEMKKIM 102
+L D I E D D +G+ID EF M + M
Sbjct: 347 --AELQDMINE-VDADGNGTIDFPEFLTMMARKM 377
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 19/94 (20%)
Query: 11 VRDFVNEEE--QFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPE 68
RD + EE+ +FK E F+ D + DG ++ EL S+ P E
Sbjct: 301 TRDQLTEEQIAEFK----EAFSLFDKDGDGTITTKELGTVMRSLG----------QNPTE 346
Query: 69 QLTKLYDSIFEKFDLDSSGSIDLHEFSAEMKKIM 102
+L D I E D D +G+ID EF M + M
Sbjct: 347 --AELQDMINE-VDADGNGTIDFPEFLTMMARKM 377
>pdb|1Q87|A Chain A, Crystal Structure Of The C-Domain Of The T.Vaginalis Inr
Binding Protein, Ibp39 (Tetragonal Form)
pdb|1Q87|B Chain B, Crystal Structure Of The C-Domain Of The T.Vaginalis Inr
Binding Protein, Ibp39 (Tetragonal Form)
pdb|1Q88|A Chain A, Crystal Structure Of The C-Domain Of The T.Vaginalis Inr
Binding Protein, Ibp39 (Monoclinic Form)
pdb|1Q88|B Chain B, Crystal Structure Of The C-Domain Of The T.Vaginalis Inr
Binding Protein, Ibp39 (Monoclinic Form)
pdb|1Q89|A Chain A, Crystal Structure Of The C-Domain Of The T.Vaginalis Inr
Binding Protein, Ibp39 (Cubic Crystal Form)
Length = 221
Score = 28.1 bits (61), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 12/98 (12%)
Query: 16 NEEEQFKKSVEEIFAALDLNNDGVLSRSEL-RKAFESMRLIETHFGVDVATPPEQLTKLY 74
NE+E F+ V+EI+ L DG + R L KA E + E P + ++
Sbjct: 30 NEQETFRAKVDEIWFRLTQKTDGTVMRDFLIEKAAEYFKQPE--------QPKQNAIEVI 81
Query: 75 DSIFEKFDLDSSGSIDLHEFSA---EMKKIMLAIADGL 109
+I + + DL++F A + IML IA L
Sbjct: 82 SAIMAPQEEQTKSKADLYKFLAMFGPYETIMLKIASLL 119
>pdb|1QV0|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1QV1|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1SL9|A Chain A, Obelin From Obelia Longissima
Length = 195
Score = 28.1 bits (61), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 67 PEQLTKLYDSIFEKFDLDSSGSIDLHEFSAEMK 99
P + + D++F+ FD D SG+I L E+ A K
Sbjct: 108 PTLIREWGDAVFDIFDKDGSGTITLDEWKAYGK 140
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 28.1 bits (61), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 19/94 (20%)
Query: 11 VRDFVNEEE--QFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPE 68
RD + EE+ +FK E F+ D + DG ++ EL S+ P E
Sbjct: 301 TRDQLTEEQIAEFK----EAFSLFDKDGDGTITTKELGTVMRSLG----------QNPTE 346
Query: 69 QLTKLYDSIFEKFDLDSSGSIDLHEFSAEMKKIM 102
+L D I E D D +G+ID EF M + M
Sbjct: 347 --AELQDMINE-VDADGNGTIDFPEFLTMMARKM 377
>pdb|2F8P|A Chain A, Crystal Structure Of Obelin Following Ca2+ Triggered
Bioluminescence Suggests Neutral Coelenteramide As The
Primary Excited State
Length = 195
Score = 28.1 bits (61), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 67 PEQLTKLYDSIFEKFDLDSSGSIDLHEFSAEMK 99
P + + D++F+ FD D SG+I L E+ A K
Sbjct: 108 PTLIREWGDAVFDIFDKDGSGTITLDEWKAYGK 140
>pdb|1EL4|A Chain A, Structure Of The Calcium-Regulated Photoprotein Obelin
Determined By Sulfur Sas
Length = 195
Score = 28.1 bits (61), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 67 PEQLTKLYDSIFEKFDLDSSGSIDLHEFSAEMK 99
P + + D++F+ FD D SG+I L E+ A K
Sbjct: 108 PTLIREWGDAVFDIFDKDGSGTITLDEWKAYGK 140
>pdb|1SL7|A Chain A, Crystal Structure Of Calcium-Loaded Apo-Obelin From Obelia
Longissima
Length = 195
Score = 28.1 bits (61), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 67 PEQLTKLYDSIFEKFDLDSSGSIDLHEFSAEMK 99
P + + D++F+ FD D SG+I L E+ A K
Sbjct: 108 PTLIREWGDAVFDIFDKDGSGTITLDEWKAYGK 140
>pdb|1JF2|A Chain A, Crystal Structure Of W92f Obelin Mutant From Obelia
Longissima At 1.72 Angstrom Resolution
pdb|1S36|A Chain A, Crystal Structure Of A Ca2+-Discharged Photoprotein:
Implications For The Mechanisms Of The Calcium Trigger
And The Bioluminescence
Length = 195
Score = 28.1 bits (61), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 67 PEQLTKLYDSIFEKFDLDSSGSIDLHEFSAEMK 99
P + + D++F+ FD D SG+I L E+ A K
Sbjct: 108 PTLIREWGDAVFDIFDKDGSGTITLDEWKAYGK 140
>pdb|1ITL|A Chain A, Human Interleukin 4: The Solution Structure Of A
Four-Helix- Bundle Protein
pdb|1ITM|A Chain A, Analysis Of The Solution Structure Of Human Interleukin 4
Determined By Heteronuclear Three-Dimensional Nuclear
Magnetic Resonance Techniques
Length = 130
Score = 28.1 bits (61), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 108 GLGSCPIQMALEDDDQNFLKKAADLEASKLSHPSS 142
GL SCP++ A + +NFL++ + K S SS
Sbjct: 96 GLNSCPVKEANQSTLENFLERLKTIMREKYSKCSS 130
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 28.1 bits (61), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 19/94 (20%)
Query: 11 VRDFVNEEE--QFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPE 68
RD + EE+ +FK E F+ D + DG ++ EL S+ P E
Sbjct: 264 TRDQLTEEQIAEFK----EAFSLFDKDGDGTITTKELGTVMRSLG----------QNPTE 309
Query: 69 QLTKLYDSIFEKFDLDSSGSIDLHEFSAEMKKIM 102
+L D I E D D +G+ID EF M + M
Sbjct: 310 --AELQDMINE-VDADGNGTIDFPEFLTMMARKM 340
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 28.1 bits (61), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 15/72 (20%)
Query: 29 FAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSIFEKFDLDSSGS 88
F+ D + G ++ E+++A + L + H D + ++ D D+ G
Sbjct: 88 FSYFDKDGSGYITLDEIQQACKDFGLDDIHI---------------DDMIKEIDQDNDGQ 132
Query: 89 IDLHEFSAEMKK 100
ID EF+A M+K
Sbjct: 133 IDYGEFAAMMRK 144
Score = 26.2 bits (56), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 17/73 (23%), Positives = 32/73 (43%), Gaps = 13/73 (17%)
Query: 24 SVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSIFEKFDL 83
++E+F +D +N G ++ EL+ + + E + + + D+
Sbjct: 11 GLKELFKMIDTDNSGTITFDELKDGLKRV-------------GSELMESEIKDLMDAADI 57
Query: 84 DSSGSIDLHEFSA 96
D SG+ID EF A
Sbjct: 58 DKSGTIDYGEFIA 70
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 28.1 bits (61), Expect = 1.7, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 40/93 (43%), Gaps = 19/93 (20%)
Query: 12 RDFVNEEE--QFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQ 69
RD + EE+ +FK E F+ D + DG ++ EL S+ P E
Sbjct: 293 RDQLTEEQIAEFK----EAFSLFDKDGDGTITTKELGTVMRSLG----------QNPTE- 337
Query: 70 LTKLYDSIFEKFDLDSSGSIDLHEFSAEMKKIM 102
+L D I E D D G+ID EF M + M
Sbjct: 338 -AELQDMINE-VDADGDGTIDFPEFLIMMARKM 368
>pdb|1IAR|A Chain A, Interleukin-4 RECEPTOR ALPHA CHAIN COMPLEX
pdb|2B8U|A Chain A, Crystal Structure Of Wildtype Human Interleukin-4
pdb|1CYL|A Chain A, Aspects Of Receptor Binding And Signalling Of
Interleukin-4 Investigated By Site-Directed Mutagenesis
And Nmr Spectroscopy
pdb|1HIK|A Chain A, Interleukin-4 (Wild-Type)
pdb|1RCB|A Chain A, Crystal Structure Of Human Recombinant Interleukin-4 At
2.25 Angstroms Resolution
pdb|2CYK|A Chain A, Aspects Of Receptor Binding And Signalling Of
Interleukin-4 Investigated By Site-Directed Mutagenesis
And Nmr Spectroscopy
pdb|2INT|A Chain A, Crystal Structure Of Recombinant Human Interleukin-4
pdb|3BPL|A Chain A, Crystal Structure Of The Il4-Il4r-Common Gamma Ternary
Complex
pdb|3BPN|A Chain A, Crystal Structure Of The Il4-Il4r-Il13ra Ternary Complex
Length = 129
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 108 GLGSCPIQMALEDDDQNFLKKAADLEASKLSHPSS 142
GL SCP++ A + +NFL++ + K S SS
Sbjct: 95 GLNSCPVKEANQSTLENFLERLKTIMREKYSKCSS 129
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 16/88 (18%)
Query: 14 FVNEE---EQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQL 70
F+ EE EQ ++ + E F D +G +S +R+ + D E L
Sbjct: 79 FLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAEL---------DETLSSEDL 129
Query: 71 TKLYDSIFEKFDLDSSGSIDLHEFSAEM 98
+ D I D D SG++D EF M
Sbjct: 130 DAMIDEI----DADGSGTVDFEEFMGVM 153
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 10 TVRDFVNEEE--QFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPP 67
RD + EE+ +FK E F+ D + DG ++ EL S+ P
Sbjct: 266 NTRDQLTEEQIAEFK----EAFSLFDKDGDGTITTKELGTVMRSLG----------QNPT 311
Query: 68 EQLTKLYDSIFEKFDLDSSGSIDLHEFSAEMKKIM 102
E +L D I E D D +G+ID EF M + M
Sbjct: 312 E--AELQDMINE-VDADGNGTIDFPEFLTMMARKM 343
>pdb|2B8Z|A Chain A, Crystal Structure Of The Interleukin-4 Variant R85a
Length = 129
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 108 GLGSCPIQMALEDDDQNFLKKAADLEASKLSHPSS 142
GL SCP++ A + +NFL++ + K S SS
Sbjct: 95 GLNSCPVKEANQSTLENFLERLKTIMREKYSKCSS 129
>pdb|1HZI|A Chain A, Interleukin-4 Mutant E9a
Length = 129
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 108 GLGSCPIQMALEDDDQNFLKKAADLEASKLSHPSS 142
GL SCP++ A + +NFL++ + K S SS
Sbjct: 95 GLNSCPVKEANQSTLENFLERLKTIMREKYSKCSS 129
>pdb|1HIJ|A Chain A, Interleukin-4 Mutant With Arg 88 Replaced With Gln (R88q)
Length = 129
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 108 GLGSCPIQMALEDDDQNFLKKAADLEASKLSHPSS 142
GL SCP++ A + +NFL++ + K S SS
Sbjct: 95 GLNSCPVKEANQSTLENFLERLKTIMREKYSKCSS 129
>pdb|2D48|A Chain A, Crystal Structure Of The Interleukin-4 Variant T13d
Length = 129
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 108 GLGSCPIQMALEDDDQNFLKKAADLEASKLSHPSS 142
GL SCP++ A + +NFL++ + K S SS
Sbjct: 95 GLNSCPVKEANQSTLENFLERLKTIMREKYSKCSS 129
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 19 EQFKKSVEEIFAALDLNNDGVLSRSELRKAFESM 52
E+ K+ + E F+ D NNDG L EL+ A +++
Sbjct: 19 EEQKQEIYEAFSLFDXNNDGFLDYHELKVAXKAL 52
>pdb|1M8Q|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|T Chain T, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 145
Score = 27.7 bits (60), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Query: 17 EEEQFKKSVEEIFAALDLNNDGVLSRSELRKAFESM 52
E E FK E F +D N DG++ + +LR+ F +M
Sbjct: 5 EIEDFK----EAFTVIDQNADGIIDKDDLRETFAAM 36
>pdb|1IJ5|A Chain A, Metal-Free Structure Of Multidomain Ef-Hand Protein,
Cbp40, From True Slime Mold
pdb|1IJ6|A Chain A, Ca2+-Bound Structure Of Multidomain Ef-Hand Protein,
Cbp40, From True Slime Mold
Length = 323
Score = 27.7 bits (60), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 12/67 (17%)
Query: 28 IFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSIFEKFDLDSSG 87
++A D + G LS+ E++K E A PE K ++ F D+D S
Sbjct: 258 LYAFADFDKSGQLSKEEVQKVLED------------AHIPESARKKFEHQFSVVDVDDSK 305
Query: 88 SIDLHEF 94
S+ EF
Sbjct: 306 SLSYQEF 312
Score = 27.3 bits (59), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 24/102 (23%)
Query: 29 FAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSIFEKFDLDSSGS 88
F +D N++G LSR E R+ F +RL G D + + D++F D D S
Sbjct: 194 FRKIDTNSNGTLSRKEFREHF--VRL-----GFDKKS-------VQDALFRYADEDESDD 239
Query: 89 IDLHEF-----SAEMKKIMLAIAD-----GLGSCPIQMALED 120
+ E+ + +I+ A AD L +Q LED
Sbjct: 240 VGFSEYVHLGLCLLVLRILYAFADFDKSGQLSKEEVQKVLED 281
>pdb|2B8X|A Chain A, Crystal Stucture Of The Interleukin-4 Variant F82d
Length = 129
Score = 27.7 bits (60), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 108 GLGSCPIQMALEDDDQNFLKKAADLEASKLSHPSS 142
GL SCP++ A + +NFL++ + K S SS
Sbjct: 95 GLNSCPVKEANQSTLENFLERLKTIMREKYSKCSS 129
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 27.7 bits (60), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 23 KSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFG--VDVATPPEQLTKLYDSIFEK 80
K + IF D N DG L R+EL + ++ + + +D + ++ ++ D++
Sbjct: 335 KELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEVDQVLDAV--- 391
Query: 81 FDLDSSGSIDLHEF 94
D D +G I+ EF
Sbjct: 392 -DFDKNGYIEYSEF 404
>pdb|2B90|A Chain A, Crystal Structure Of The Interleukin-4 Variant T13dr85a
Length = 129
Score = 27.7 bits (60), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 108 GLGSCPIQMALEDDDQNFLKKAADLEASKLSHPSS 142
GL SCP++ A + +NFL++ + K S SS
Sbjct: 95 GLNSCPVKEANQSTLENFLERLKTIMREKYSKCSS 129
>pdb|1JF0|A Chain A, The Crystal Structure Of Obelin From Obelia Geniculata At
1.82 A Resolution
Length = 195
Score = 27.7 bits (60), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 67 PEQLTKLYDSIFEKFDLDSSGSIDLHEFSA 96
P + + D++F+ FD D SG+I L E+ A
Sbjct: 108 PTLIREWGDAVFDIFDKDGSGTITLDEWKA 137
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 27.7 bits (60), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 19/93 (20%)
Query: 12 RDFVNEEE--QFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQ 69
RD + EE+ +FK E F+ D + DG ++ EL S+ P E
Sbjct: 268 RDQLTEEQIAEFK----EAFSLFDKDGDGTITTKELGTVMRSLG----------QNPTE- 312
Query: 70 LTKLYDSIFEKFDLDSSGSIDLHEFSAEMKKIM 102
+L D I E D D +G+ID EF M + M
Sbjct: 313 -AELQDMINE-VDADGNGTIDFPEFLTMMARKM 343
>pdb|2B91|A Chain A, Crystal Structure Of The Interleukin-4 Variant F82dr85a
Length = 129
Score = 27.7 bits (60), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 108 GLGSCPIQMALEDDDQNFLKKAADLEASKLSHPSS 142
GL SCP++ A + +NFL++ + K S SS
Sbjct: 95 GLNSCPVKEANQSTLENFLERLKTIMREKYSKCSS 129
>pdb|2B8Y|A Chain A, Crystal Structure Of The Interleukin-4 Variant T13df82d
Length = 129
Score = 27.7 bits (60), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 108 GLGSCPIQMALEDDDQNFLKKAADLEASKLSHPSS 142
GL SCP++ A + +NFL++ + K S SS
Sbjct: 95 GLNSCPVKEANQSTLENFLERLKTIMREKYSKCSS 129
>pdb|1MG5|A Chain A, Crystal Structure Of Drosophila Melanogaster Alcohol
Dehydrogenase Complexed With Nadh And Acetate At 1.6 A
pdb|1MG5|B Chain B, Crystal Structure Of Drosophila Melanogaster Alcohol
Dehydrogenase Complexed With Nadh And Acetate At 1.6 A
Length = 255
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 10/72 (13%)
Query: 33 DLNNDGVLSRSELRKAFESMRLIE-----THFGVDVATPPEQLTKLYDSIFEKFD----- 82
DL N +L R E A ++ I T + DV P + TKL +IF +
Sbjct: 30 DLKNLVILDRIENPAAIAELKAINPKVTVTFYPYDVTVPIAETTKLLKTIFAQLKTVDVL 89
Query: 83 LDSSGSIDLHEF 94
++ +G +D H+
Sbjct: 90 INGAGILDDHQI 101
>pdb|2MYS|B Chain B, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
pdb|1I84|U Chain U, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C
Alphas Provided For Regulatory Light Chain. Only
Backbone Atoms Provided For S2 Fragment.
pdb|1I84|Z Chain Z, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C
Alphas Provided For Regulatory Light Chain. Only
Backbone Atoms Provided For S2 Fragment
Length = 166
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 26 EEIFAALDLNNDGVLSRSELRKAFESM 52
+E F +D N DG++ + +LR+ F +M
Sbjct: 28 KEAFTVIDQNADGIIDKDDLRETFAAM 54
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 8/78 (10%)
Query: 22 KKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSIFEKF 81
KK + F D++NDG ++ +EL + G ++ +
Sbjct: 121 KKLIYCAFRVFDVDNDGEITTAELAHILYN--------GNKKGNITQRDVNRVKRMIRDV 172
Query: 82 DLDSSGSIDLHEFSAEMK 99
D ++ G ID HEFS MK
Sbjct: 173 DKNNDGKIDFHEFSEMMK 190
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 13/66 (19%)
Query: 37 DGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSIFEKFDLDSSGSIDLHEFSA 96
DG +S EL K MR++ + PE+L ++ D + D D SG++D EF
Sbjct: 33 DGSISTKELGKV---MRMLGQN------PTPEELQEMIDEV----DEDGSGTVDFDEFLV 79
Query: 97 EMKKIM 102
M + M
Sbjct: 80 MMVRSM 85
>pdb|1CB1|A Chain A, Three-Dimensional Solution Structure Of Ca2+-Loaded
Porcine Calbindin D9k Determined By Nuclear Magnetic
Resonance Spectroscopy
Length = 78
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 12/79 (15%)
Query: 23 KSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSIFEKFD 82
KS+ E +AA + + LS+ EL+ +LI+ F + P + D +F++ D
Sbjct: 10 KSIFEKYAAKE-GDPNQLSKEELK------QLIQAEFPSLLKGP-----RTLDDLFQELD 57
Query: 83 LDSSGSIDLHEFSAEMKKI 101
+ G + EF +KKI
Sbjct: 58 KNGDGEVSFEEFQVLVKKI 76
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 40/94 (42%), Gaps = 19/94 (20%)
Query: 11 VRDFVNEEE--QFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPE 68
RD + EE+ +FK E F+ D + DG ++ EL S+ P E
Sbjct: 301 TRDQLTEEQIAEFK----EAFSLFDKDGDGTITTKELGTVMRSLG----------QNPTE 346
Query: 69 QLTKLYDSIFEKFDLDSSGSIDLHEFSAEMKKIM 102
+L D I E D D G+ID EF M + M
Sbjct: 347 --AELQDMINE-VDADGDGTIDFPEFLTMMARKM 377
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 40/94 (42%), Gaps = 19/94 (20%)
Query: 11 VRDFVNEEE--QFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPE 68
RD + EE+ +FK E F+ D + DG ++ EL S+ P E
Sbjct: 300 TRDQLTEEQIAEFK----EAFSLFDKDGDGTITTKELGTVMRSLG----------QNPTE 345
Query: 69 QLTKLYDSIFEKFDLDSSGSIDLHEFSAEMKKIM 102
+L D I E D D G+ID EF M + M
Sbjct: 346 --AELQDMINE-VDADGDGTIDFPEFLTMMARKM 376
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal
Sensor Domain Of Centrin
Length = 96
Score = 27.3 bits (59), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 13/76 (17%)
Query: 19 EQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSIF 78
E+ K+ + E F D + G + EL+ A ++ E++ K+ I
Sbjct: 26 EEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGF---------EPKKEEIKKMISEI- 75
Query: 79 EKFDLDSSGSIDLHEF 94
D D SG+ID EF
Sbjct: 76 ---DKDGSGTIDFEEF 88
>pdb|1BBN|A Chain A, Three-Dimensional Solution Structure Of Human
Interleukin-4 By Multi- Dimensional Heteronuclear
Magnetic Resonance Spectroscopy
pdb|1BCN|A Chain A, Three-Dimensional Solution Structure Of Human
Interleukin-4 By Multi-Dimensional Heteronuclear
Magnetic Resonance Spectroscopy
pdb|1ITI|A Chain A, The High Resolution Three-Dimensional Solution Structure
Of Human Interleukin-4 Determined By Multi-Dimensional
Heteronuclear Magnetic Resonance Spectroscopy
Length = 133
Score = 27.3 bits (59), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 108 GLGSCPIQMALEDDDQNFLKKAADLEASKLSHPSS 142
GL SCP++ A + +NFL++ + K S SS
Sbjct: 99 GLNSCPVKEADQSTLENFLERLKTIMREKYSKCSS 133
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 27.3 bits (59), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 14/85 (16%)
Query: 18 EEQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSI 77
EEQ + +E FA D + DG ++ EL S+ P E +L D I
Sbjct: 6 EEQIAE-FKEAFALFDKDGDGTITTKELGTVMRSLG----------QNPTE--AELQDMI 52
Query: 78 FEKFDLDSSGSIDLHEFSAEMKKIM 102
E D D +G+ID EF + M + M
Sbjct: 53 NE-VDADGNGTIDFPEFLSLMARKM 76
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 27.3 bits (59), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 14/85 (16%)
Query: 18 EEQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSI 77
EEQ + +E FA D + DG ++ EL S+ P E +L D I
Sbjct: 6 EEQIAE-FKEAFALFDKDGDGTITTKELGTVMRSLG----------QNPTE--AELQDMI 52
Query: 78 FEKFDLDSSGSIDLHEFSAEMKKIM 102
E D D +G+ID EF + M + M
Sbjct: 53 NE-VDADGNGTIDFPEFLSLMARKM 76
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 27.3 bits (59), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 5/43 (11%)
Query: 75 DSIFEKFDLDSSGSIDLHEFSAEMKKIMLAIADG-----LGSC 112
D+I E+ D D SG+ID EF M + M A G L +C
Sbjct: 56 DAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANC 98
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 26.9 bits (58), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 5/43 (11%)
Query: 75 DSIFEKFDLDSSGSIDLHEFSAEMKKIMLAIADG-----LGSC 112
D+I E+ D D SG+ID EF M + M A G L +C
Sbjct: 59 DAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANC 101
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 26.9 bits (58), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 5/43 (11%)
Query: 75 DSIFEKFDLDSSGSIDLHEFSAEMKKIMLAIADG-----LGSC 112
D+I E+ D D SG+ID EF M + M A G L +C
Sbjct: 59 DAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANC 101
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 26.9 bits (58), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 75 DSIFEKFDLDSSGSIDLHEFSAEMKKIMLAIADG 108
D+I E+ D D SG+ID EF M + M A G
Sbjct: 56 DAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKG 89
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain Of
Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr, 40
Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle, Nmr,
Minimized Average Structure
Length = 90
Score = 26.9 bits (58), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 19/94 (20%)
Query: 11 VRDFVNEE--EQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPE 68
R F++EE +FK + F D + G +S EL MR++ + E
Sbjct: 10 ARAFLSEEMIAEFKAA----FDMFDADGGGDISTKELGTV---MRMLGQN------PTKE 56
Query: 69 QLTKLYDSIFEKFDLDSSGSIDLHEFSAEMKKIM 102
+L D+I E+ D D SG+ID EF M + M
Sbjct: 57 EL----DAIIEEVDEDGSGTIDFEEFLVMMVRQM 86
>pdb|2BE4|A Chain A, X-ray Structure An Ef-hand Protein From Danio Rerio
Dr.36843
pdb|2Q4U|A Chain A, Ensemble Refinement Of The Crystal Structure Of An Ef-Hand
Protein From Danio Rerio Dr.36843
Length = 272
Score = 26.9 bits (58), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Query: 24 SVE--EIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSIFEKF 81
SVE +I+ D ++ G +S +EL+ + + L PP +L + D+ + F
Sbjct: 103 SVEFXKIWRKYDADSSGYISAAELKNFLKDLFLQHKK-----KIPPNKLDEYTDAXXKIF 157
Query: 82 DLDSSGSIDLHEFS 95
D + G +DL++ +
Sbjct: 158 DKNKDGRLDLNDLA 171
>pdb|2JJZ|B Chain B, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2JJZ|C Chain C, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2JJZ|D Chain D, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2VTG|A Chain A, Crystal Structure Of Human Iba2, Trigonal Crystal Form
Length = 150
Score = 26.9 bits (58), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 67 PEQLTKLYDSIFEKFDLDSSGSIDLHEFSAEMKKI 101
PE+LT + E FDL++ G IDL M+K+
Sbjct: 46 PEKLTAFKEKYME-FDLNNEGEIDLMSLKRMMEKL 79
>pdb|2JJZ|A Chain A, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
Length = 150
Score = 26.9 bits (58), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 67 PEQLTKLYDSIFEKFDLDSSGSIDLHEFSAEMKKI 101
PE+LT + E FDL++ G IDL M+K+
Sbjct: 46 PEKLTAFKEKYME-FDLNNEGEIDLMSLKRMMEKL 79
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 26.9 bits (58), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 15/74 (20%)
Query: 23 KSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSIFEKFD 82
K + E+F LD N++G LS E+ S V + + I + D
Sbjct: 39 KYINELFYKLDTNHNGSLSHREIYTVLAS-----------VGIKKWDINR----ILQALD 83
Query: 83 LDSSGSIDLHEFSA 96
++ G+I EF A
Sbjct: 84 INDRGNITYTEFMA 97
>pdb|1KFI|A Chain A, Crystal Structure Of The Exocytosis-Sensitive
Phosphoprotein, Pp63PARAFUSIN (PHOSPHOGLUCOMUTASE) FROM
Paramecium
pdb|1KFI|B Chain B, Crystal Structure Of The Exocytosis-Sensitive
Phosphoprotein, Pp63PARAFUSIN (PHOSPHOGLUCOMUTASE) FROM
Paramecium
pdb|1KFQ|A Chain A, Crystal Structure Of Exocytosis-Sensitive Phosphoprotein,
Pp63PARAFUSIN (PHOSPHOGLUCOMUTSE) FROM PARAMECIUM. OPEN
Form
pdb|1KFQ|B Chain B, Crystal Structure Of Exocytosis-Sensitive Phosphoprotein,
Pp63PARAFUSIN (PHOSPHOGLUCOMUTSE) FROM PARAMECIUM. OPEN
Form
Length = 572
Score = 26.9 bits (58), Expect = 3.8, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 15/75 (20%)
Query: 9 STVRDFVNEEEQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPE 68
+ +++++ + +F+K + +L+ GV FE RL ++HF V V +
Sbjct: 162 TKIKEYLTVDYEFEKHI-------NLDQIGVYK-------FEGTRLEKSHFEVKVVDTVQ 207
Query: 69 QLTKLYDSIFEKFDL 83
T+L +F+ FDL
Sbjct: 208 DYTQLMQKLFD-FDL 221
>pdb|1TXD|A Chain A, Crystal Structure Of The Dh/ph Domains Of
Leukemia-associated Rhogef
pdb|1X86|A Chain A, Crystal Structure Of The DhPH DOMAINS OF
LEUKEMIA-Associated Rhogef In Complex With Rhoa
pdb|1X86|C Chain C, Crystal Structure Of The DhPH DOMAINS OF
LEUKEMIA-Associated Rhogef In Complex With Rhoa
pdb|1X86|E Chain E, Crystal Structure Of The DhPH DOMAINS OF
LEUKEMIA-Associated Rhogef In Complex With Rhoa
pdb|1X86|G Chain G, Crystal Structure Of The DhPH DOMAINS OF
LEUKEMIA-Associated Rhogef In Complex With Rhoa
Length = 385
Score = 26.9 bits (58), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 23 KSVEEIFAALDLNNDGVLSRSELRKAFESMR-LIETHFGVD 62
K ++++F ++ +G+LS SELRK F ++ +++ H G++
Sbjct: 44 KVLDQVFYQ-RVSREGILSPSELRKIFSNLEDILQLHIGLN 83
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 26.9 bits (58), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 75 DSIFEKFDLDSSGSIDLHEFSAEMKKIMLAIADG 108
D+I E+ D D SG+ID EF M + M A G
Sbjct: 56 DAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKG 89
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 26.9 bits (58), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 75 DSIFEKFDLDSSGSIDLHEFSAEMKKIMLAIADG 108
D+I E+ D D SG+ID EF M + M A G
Sbjct: 59 DAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKG 92
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 26.9 bits (58), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 75 DSIFEKFDLDSSGSIDLHEFSAEMKKIMLAIADG 108
D+I E+ D D SG+ID EF M + M A G
Sbjct: 59 DAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKG 92
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 26.9 bits (58), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 75 DSIFEKFDLDSSGSIDLHEFSAEMKKIM 102
D+I E+ D D SG+ID EF M + M
Sbjct: 59 DAIIEEVDEDGSGTIDFEEFLVMMVRQM 86
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 26.6 bits (57), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 16/84 (19%)
Query: 18 EEQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPE-QLTKLYDS 76
EEQ + +E FA D +N+G +S SEL S+ L +P E ++ L +
Sbjct: 6 EEQIAE-FKEAFALFDKDNNGSISSSELATVMRSLGL----------SPSEAEVNDLMNE 54
Query: 77 IFEKFDLDSSGSIDLHEFSAEMKK 100
I D+D + I+ EF A M +
Sbjct: 55 I----DVDGNHQIEFSEFLALMSR 74
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 26.6 bits (57), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 13/76 (17%)
Query: 19 EQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSIF 78
E+ K+ + E F D + G + EL+ A ++ E++ K+ I
Sbjct: 24 EEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGF---------EPKKEEIKKMISEI- 73
Query: 79 EKFDLDSSGSIDLHEF 94
D D SG+ID EF
Sbjct: 74 ---DKDGSGTIDFEEF 86
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 26.6 bits (57), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 14/85 (16%)
Query: 18 EEQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSI 77
EEQ + +E F+ D + DG ++ EL S+ P E +L D I
Sbjct: 6 EEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLG----------QNPTE--AELQDMI 52
Query: 78 FEKFDLDSSGSIDLHEFSAEMKKIM 102
E D D +G+ID EF M + M
Sbjct: 53 NE-VDADGNGTIDFPEFLTMMARKM 76
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 26.6 bits (57), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 16/84 (19%)
Query: 18 EEQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPE-QLTKLYDS 76
EEQ + +E FA D +N+G +S SEL S+ L +P E ++ L +
Sbjct: 6 EEQIAE-FKEAFALFDKDNNGSISSSELATVMRSLGL----------SPSEAEVNDLMNE 54
Query: 77 IFEKFDLDSSGSIDLHEFSAEMKK 100
I D+D + I+ EF A M +
Sbjct: 55 I----DVDGNHQIEFSEFLALMSR 74
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 26.6 bits (57), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 16/84 (19%)
Query: 18 EEQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPE-QLTKLYDS 76
EEQ + +E FA D +N+G +S SEL S+ L +P E ++ L +
Sbjct: 7 EEQIAE-FKEAFALFDKDNNGSISSSELATVMRSLGL----------SPSEAEVNDLMNE 55
Query: 77 IFEKFDLDSSGSIDLHEFSAEMKK 100
I D+D + I+ EF A M +
Sbjct: 56 I----DVDGNHQIEFSEFLALMSR 75
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal Muscle
Troponin-C
Length = 76
Score = 26.6 bits (57), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 75 DSIFEKFDLDSSGSIDLHEFSAEMKKIM 102
D+I E+ D D SG+ID EF M + M
Sbjct: 48 DAIIEEVDEDGSGTIDFEEFLVMMVRQM 75
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 26.6 bits (57), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 14/85 (16%)
Query: 18 EEQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSI 77
EEQ + +E F+ D + DG ++ EL S+ P E +L D I
Sbjct: 6 EEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLG----------QNPTE--AELQDMI 52
Query: 78 FEKFDLDSSGSIDLHEFSAEMKKIM 102
E D D +G+ID EF M + M
Sbjct: 53 NE-VDADGNGTIDFPEFLTMMARKM 76
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 26.6 bits (57), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 14/85 (16%)
Query: 18 EEQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSI 77
EEQ + +E F+ D + DG ++ EL S+ P E +L D I
Sbjct: 6 EEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLG----------QNPTE--AELQDMI 52
Query: 78 FEKFDLDSSGSIDLHEFSAEMKKIM 102
E D D +G+ID EF M + M
Sbjct: 53 NE-VDADGNGTIDFPEFLTMMARKM 76
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 26.6 bits (57), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 7/69 (10%)
Query: 29 FAALDLNNDGVLSRSEL---RKAFESMRLIETHFGVDVATPPEQLTKLYDSIFEKFDLDS 85
F D+N DG +++ E+ K+ M T+ + P E + + FEK D +
Sbjct: 15 FNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVERF----FEKMDRNQ 70
Query: 86 SGSIDLHEF 94
G + + EF
Sbjct: 71 DGVVTIEEF 79
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 26.6 bits (57), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 14/85 (16%)
Query: 18 EEQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSI 77
EEQ + +E F+ D + DG ++ EL S+ P E +L D I
Sbjct: 6 EEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLG----------QNPTE--AELQDMI 52
Query: 78 FEKFDLDSSGSIDLHEFSAEMKKIM 102
E D D +G+ID EF M + M
Sbjct: 53 NE-VDADGNGTIDFPEFLTMMARKM 76
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 26.6 bits (57), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 16/84 (19%)
Query: 18 EEQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPE-QLTKLYDS 76
EEQ + +E FA D +N+G +S SEL S+ L +P E ++ L +
Sbjct: 6 EEQIAE-FKEAFALFDKDNNGSISSSELATVMRSLGL----------SPSEAEVNDLMNE 54
Query: 77 IFEKFDLDSSGSIDLHEFSAEMKK 100
I D+D + I+ EF A M +
Sbjct: 55 I----DVDGNHQIEFSEFLALMSR 74
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 26.6 bits (57), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 14/85 (16%)
Query: 18 EEQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSI 77
EEQ + +E F+ D + DG ++ EL S+ P E +L D I
Sbjct: 6 EEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLG----------QNPTE--AELQDMI 52
Query: 78 FEKFDLDSSGSIDLHEFSAEMKKIM 102
E D D +G+ID EF M + M
Sbjct: 53 NE-VDADGNGTIDFPEFLTMMARKM 76
>pdb|4B87|A Chain A, Crystal Structure Of Human Dna Cross-Link Repair 1a
Length = 367
Score = 26.6 bits (57), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Query: 33 DLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQ---LTKLYDSIFEKFDLDSSGSI 89
D D + RS L M ++T + T P Q + ++ FE L+ +
Sbjct: 142 DFRADPSMERSLLADQKVHMLYLDTTYCSPEYTFPSQQEVIRFAINTAFEAVTLNPHALV 201
Query: 90 DLHEFSAEMKKIMLAIADGLGS 111
+S +K+ LAIAD LGS
Sbjct: 202 VCGTYSIGKEKVFLAIADVLGS 223
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 26.6 bits (57), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 13/76 (17%)
Query: 19 EQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSIF 78
E+ K+ + E F D + G + EL+ A ++ E++ K+ I
Sbjct: 4 EEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGF---------EPKKEEIKKMIADI- 53
Query: 79 EKFDLDSSGSIDLHEF 94
D D SG+ID EF
Sbjct: 54 ---DKDGSGTIDFEEF 66
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 26.2 bits (56), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 16/84 (19%)
Query: 18 EEQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPE-QLTKLYDS 76
EEQ + +E FA D +N G +S SEL S+ L +P E ++ L +
Sbjct: 7 EEQIAE-FKEAFALFDKDNSGSISASELATVMRSLGL----------SPSEAEVADLMNE 55
Query: 77 IFEKFDLDSSGSIDLHEFSAEMKK 100
I D+D + +I+ EF A M +
Sbjct: 56 I----DVDGNHAIEFSEFLALMSR 75
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 26.2 bits (56), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 13/69 (18%)
Query: 26 EEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSIFEKFDLDS 85
+ +F D +N G++ ++EL++A + FG ++ + +D + KFD
Sbjct: 77 QNVFRTYDRDNSGMIDKNELKQAL-------SGFGYRLS------DQFHDILIRKFDRQG 123
Query: 86 SGSIDLHEF 94
G I +F
Sbjct: 124 RGQIAFDDF 132
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 26.2 bits (56), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 13/69 (18%)
Query: 26 EEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSIFEKFDLDS 85
+ +F D +N G++ ++EL++A + FG ++ + +D + KFD
Sbjct: 96 QNVFRTYDRDNSGMIDKNELKQAL-------SGFGYRLS------DQFHDILIRKFDRQG 142
Query: 86 SGSIDLHEF 94
G I +F
Sbjct: 143 RGQIAFDDF 151
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 26.2 bits (56), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 26 EEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVD--VATPP 67
+E F +D + DG +S++++R F+S+ + T +D VA P
Sbjct: 60 KEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEAP 103
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 26.2 bits (56), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 13/69 (18%)
Query: 26 EEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSIFEKFDLDS 85
+ +F D +N G++ ++EL++A + FG ++ + +D + KFD
Sbjct: 73 QNVFRTYDRDNSGMIDKNELKQAL-------SGFGYRLS------DQFHDILIRKFDRQG 119
Query: 86 SGSIDLHEF 94
G I +F
Sbjct: 120 RGQIAFDDF 128
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 26.2 bits (56), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 14/85 (16%)
Query: 18 EEQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSI 77
EEQ + +E F+ D + DG ++ EL S+ P E +L D I
Sbjct: 306 EEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLG----------QNPTE--AELQDMI 352
Query: 78 FEKFDLDSSGSIDLHEFSAEMKKIM 102
E D D G+ID EF M + M
Sbjct: 353 NE-VDADGDGTIDFPEFLTMMARKM 376
>pdb|1QLS|A Chain A, S100c (S100a11),Or Calgizzarin, In Complex With Annexin I
N-Terminus
Length = 99
Score = 26.2 bits (56), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 73 LYDSIFEKFDLDSSGSIDLHEFSAEMKKIMLAIAD 107
+ D + +K DLDS G +D EF + + +A D
Sbjct: 57 VLDRMMKKLDLDSDGQLDFQEFLNLIGGLAIACHD 91
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 26.2 bits (56), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 13/69 (18%)
Query: 26 EEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSIFEKFDLDS 85
+ +F D +N G++ ++EL++A + FG ++ + +D + KFD
Sbjct: 74 QNVFRTYDRDNSGMIDKNELKQAL-------SGFGYRLS------DQFHDILIRKFDRQG 120
Query: 86 SGSIDLHEF 94
G I +F
Sbjct: 121 RGQIAFDDF 129
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 26.2 bits (56), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 14/85 (16%)
Query: 18 EEQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSI 77
EEQ + +E F+ D + DG ++ EL S+ P E +L D I
Sbjct: 2 EEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLG----------QNPTE--AELQDMI 48
Query: 78 FEKFDLDSSGSIDLHEFSAEMKKIM 102
E D D +G+ID EF M + M
Sbjct: 49 NE-VDADGNGTIDFPEFLTMMARKM 72
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 26.2 bits (56), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 14/85 (16%)
Query: 18 EEQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSI 77
EEQ + +E F+ D + DG ++ EL S+ P E +L D I
Sbjct: 306 EEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLG----------QNPTE--AELQDMI 352
Query: 78 FEKFDLDSSGSIDLHEFSAEMKKIM 102
E D D G+ID EF M + M
Sbjct: 353 NE-VDADGDGTIDFPEFLTMMARKM 376
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 26.2 bits (56), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 78 FEKFDLDSSGSIDLHEFSAEMKKI 101
F+ FD + +GSID HE M+ +
Sbjct: 13 FDLFDTNKTGSIDYHELKVAMRAL 36
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 26.2 bits (56), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 13/69 (18%)
Query: 26 EEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSIFEKFDLDS 85
+ +F D +N G++ ++EL++A + FG ++ + +D + KFD
Sbjct: 95 QNVFRTYDRDNSGMIDKNELKQAL-------SGFGYRLS------DQFHDILIRKFDRQG 141
Query: 86 SGSIDLHEF 94
G I +F
Sbjct: 142 RGQIAFDDF 150
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 26.2 bits (56), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 14/85 (16%)
Query: 18 EEQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSI 77
EEQ + +E F+ D + DG ++ EL S+ P E +L D I
Sbjct: 7 EEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLG----------QNPTE--AELQDMI 53
Query: 78 FEKFDLDSSGSIDLHEFSAEMKKIM 102
E D D +G+ID EF M + M
Sbjct: 54 NE-VDADGNGTIDFPEFLTMMARKM 77
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 26.2 bits (56), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 14/85 (16%)
Query: 18 EEQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSI 77
EEQ + +E F+ D + DG ++ EL S+ P E +L D I
Sbjct: 12 EEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLG----------QNPTE--AELQDMI 58
Query: 78 FEKFDLDSSGSIDLHEFSAEMKKIM 102
E D D +G+ID EF M + M
Sbjct: 59 NE-VDADGNGTIDFPEFLTMMARKM 82
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 26.2 bits (56), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 14/85 (16%)
Query: 18 EEQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSI 77
EEQ + +E F+ D + DG ++ EL S+ P E +L D I
Sbjct: 6 EEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLG----------QNPTE--AELQDMI 52
Query: 78 FEKFDLDSSGSIDLHEFSAEMKKIM 102
E D D +G+ID EF M + M
Sbjct: 53 NE-VDADGNGTIDFPEFLTMMARKM 76
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 26.2 bits (56), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 14/85 (16%)
Query: 18 EEQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSI 77
EEQ + +E F+ D + DG ++ EL S+ P E +L D I
Sbjct: 7 EEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLG----------QNPTE--AELQDMI 53
Query: 78 FEKFDLDSSGSIDLHEFSAEMKKIM 102
E D D +G+ID EF M + M
Sbjct: 54 NE-VDADGNGTIDFPEFLTMMARKM 77
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 26.2 bits (56), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 14/85 (16%)
Query: 18 EEQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSI 77
EEQ + +E F+ D + DG ++ EL S+ P E +L D I
Sbjct: 6 EEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLG----------QNPTE--AELQDMI 52
Query: 78 FEKFDLDSSGSIDLHEFSAEMKKIM 102
E D D +G+ID EF M + M
Sbjct: 53 NE-VDADGNGTIDFPEFLTMMARKM 76
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 26.2 bits (56), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 14/85 (16%)
Query: 18 EEQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSI 77
EEQ + +E F+ D + DG ++ EL S+ P E +L D I
Sbjct: 6 EEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLG----------QNPTE--AELQDMI 52
Query: 78 FEKFDLDSSGSIDLHEFSAEMKKIM 102
E D D +G+ID EF M + M
Sbjct: 53 NE-VDADGNGTIDFPEFLTMMARKM 76
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 26.2 bits (56), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 14/85 (16%)
Query: 18 EEQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSI 77
EEQ + +E F+ D + DG ++ EL S+ P E +L D I
Sbjct: 10 EEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLG----------QNPTE--AELQDMI 56
Query: 78 FEKFDLDSSGSIDLHEFSAEMKKIM 102
E D D +G+ID EF M + M
Sbjct: 57 NE-VDADGNGTIDFPEFLTMMARKM 80
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 26.2 bits (56), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 14/85 (16%)
Query: 18 EEQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSI 77
EEQ + +E F+ D + DG ++ EL S+ P E +L D I
Sbjct: 5 EEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLG----------QNPTE--AELQDMI 51
Query: 78 FEKFDLDSSGSIDLHEFSAEMKKIM 102
E D D +G+ID EF M + M
Sbjct: 52 NE-VDADGNGTIDFPEFLTMMARKM 75
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 26.2 bits (56), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 14/85 (16%)
Query: 18 EEQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSI 77
EEQ + +E F+ D + DG ++ EL S+ P E +L D I
Sbjct: 4 EEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLG----------QNPTE--AELQDMI 50
Query: 78 FEKFDLDSSGSIDLHEFSAEMKKIM 102
E D D +G+ID EF M + M
Sbjct: 51 NE-VDADGNGTIDFPEFLTMMARKM 74
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 26.2 bits (56), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 14/85 (16%)
Query: 18 EEQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSI 77
EEQ + +E F+ D + DG ++ EL S+ P E +L D I
Sbjct: 7 EEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLG----------QNPTE--AELQDMI 53
Query: 78 FEKFDLDSSGSIDLHEFSAEMKKIM 102
E D D +G+ID EF M + M
Sbjct: 54 NE-VDADGNGTIDFPEFLTMMARKM 77
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 26.2 bits (56), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 14/85 (16%)
Query: 18 EEQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSI 77
EEQ + +E F+ D + DG ++ EL S+ P E +L D I
Sbjct: 7 EEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLG----------QNPTE--AELQDMI 53
Query: 78 FEKFDLDSSGSIDLHEFSAEMKKIM 102
E D D +G+ID EF M + M
Sbjct: 54 NE-VDADGNGTIDFPEFLTMMARKM 77
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 26.2 bits (56), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 14/85 (16%)
Query: 18 EEQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSI 77
EEQ + +E F+ D + DG ++ EL S+ P E +L D I
Sbjct: 7 EEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLG----------QNPTE--AELQDMI 53
Query: 78 FEKFDLDSSGSIDLHEFSAEMKKIM 102
E D D +G+ID EF M + M
Sbjct: 54 NE-VDADGNGTIDFPEFLTMMARKM 77
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 26.2 bits (56), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 14/85 (16%)
Query: 18 EEQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSI 77
EEQ + +E F+ D + DG ++ EL S+ P E +L D I
Sbjct: 7 EEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLG----------QNPTE--AELQDMI 53
Query: 78 FEKFDLDSSGSIDLHEFSAEMKKIM 102
E D D +G+ID EF M + M
Sbjct: 54 NE-VDADGNGTIDFPEFLTMMARKM 77
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 26.2 bits (56), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 14/85 (16%)
Query: 18 EEQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSI 77
EEQ + +E F+ D + DG ++ EL S+ P E +L D I
Sbjct: 3 EEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLG----------QNPTE--AELQDMI 49
Query: 78 FEKFDLDSSGSIDLHEFSAEMKKIM 102
E D D +G+ID EF M + M
Sbjct: 50 NE-VDADGNGTIDFPEFLTMMARKM 73
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 26.2 bits (56), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 14/85 (16%)
Query: 18 EEQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSI 77
EEQ + +E F+ D + DG ++ EL S+ P E +L D I
Sbjct: 6 EEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLG----------QNPTE--AELQDMI 52
Query: 78 FEKFDLDSSGSIDLHEFSAEMKKIM 102
E D D +G+ID EF M + M
Sbjct: 53 NE-VDADGNGTIDFPEFLTMMARKM 76
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 26.2 bits (56), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 9 STVRDFVNEEEQFKKSVEEIFAALDLNNDGVLSRSELRKAFES 51
S+V +E +K E+IF +D N DG LS E + +S
Sbjct: 133 SSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKS 175
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 26.2 bits (56), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 14/85 (16%)
Query: 18 EEQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSI 77
EEQ + +E F+ D + DG ++ EL S+ P E +L D I
Sbjct: 6 EEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLG----------QNPTE--AELQDMI 52
Query: 78 FEKFDLDSSGSIDLHEFSAEMKKIM 102
E D D +G+ID EF M + M
Sbjct: 53 NE-VDADGNGTIDFPEFLTMMARKM 76
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 26.2 bits (56), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 14/85 (16%)
Query: 18 EEQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSI 77
EEQ + +E F+ D + DG ++ EL S+ P E +L D I
Sbjct: 6 EEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLG----------QNPTE--AELQDMI 52
Query: 78 FEKFDLDSSGSIDLHEFSAEMKKIM 102
E D D +G+ID EF M + M
Sbjct: 53 NE-VDADGNGTIDFPEFLTMMARKM 76
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 26.2 bits (56), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 14/85 (16%)
Query: 18 EEQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSI 77
EEQ + +E F+ D + DG ++ EL S+ P E +L D I
Sbjct: 7 EEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLG----------QNPTE--AELQDMI 53
Query: 78 FEKFDLDSSGSIDLHEFSAEMKKIM 102
E D D +G+ID EF M + M
Sbjct: 54 NE-VDADGNGTIDFPEFLTMMARKM 77
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 25.8 bits (55), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 14/85 (16%)
Query: 18 EEQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSI 77
EEQ + +E F+ D + DG ++ EL S+ P E +L D I
Sbjct: 7 EEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLG----------QNPTE--AELQDMI 53
Query: 78 FEKFDLDSSGSIDLHEFSAEMKKIM 102
E D D +G+ID EF M + M
Sbjct: 54 NE-VDADGNGTIDFPEFLTMMARKM 77
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 25.8 bits (55), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 13/76 (17%)
Query: 27 EIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSIFEKFDLDSS 86
E F+ D + DG ++ EL S+ P E +L D I E D D +
Sbjct: 12 EAFSLFDKDGDGTITTKELGTVMRSLG----------QNPTE--AELQDMINE-VDADGN 58
Query: 87 GSIDLHEFSAEMKKIM 102
G+ID EF M + M
Sbjct: 59 GTIDFPEFLTMMARKM 74
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 25.8 bits (55), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 14/85 (16%)
Query: 18 EEQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSI 77
EEQ + +E F+ D + DG ++ EL S+ P E +L D I
Sbjct: 6 EEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLG----------QNPTE--AELQDMI 52
Query: 78 FEKFDLDSSGSIDLHEFSAEMKKIM 102
E D D +G+ID EF M + M
Sbjct: 53 NE-VDADGNGTIDFPEFLTMMARKM 76
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 25.8 bits (55), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 14/85 (16%)
Query: 18 EEQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSI 77
EEQ + +E F+ D + DG ++ EL S+ P E +L D I
Sbjct: 8 EEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLG----------QNPTE--AELQDMI 54
Query: 78 FEKFDLDSSGSIDLHEFSAEMKKIM 102
E D D +G+ID EF M + M
Sbjct: 55 NE-VDADGNGTIDFPEFLTMMARKM 78
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 25.8 bits (55), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 14/85 (16%)
Query: 18 EEQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSI 77
EEQ + +E F+ D + DG ++ EL S+ P E +L D I
Sbjct: 7 EEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLG----------QNPTE--AELQDMI 53
Query: 78 FEKFDLDSSGSIDLHEFSAEMKKIM 102
E D D +G+ID EF M + M
Sbjct: 54 NE-VDADGNGTIDFPEFLTMMARKM 77
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 25.8 bits (55), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 14/85 (16%)
Query: 18 EEQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSI 77
EEQ + +E F+ D + DG ++ EL S+ P E +L D I
Sbjct: 4 EEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLG----------QNPTE--AELQDMI 50
Query: 78 FEKFDLDSSGSIDLHEFSAEMKKIM 102
E D D +G+ID EF M + M
Sbjct: 51 NE-VDADGNGTIDFPEFLTMMARKM 74
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 25.8 bits (55), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 14/85 (16%)
Query: 18 EEQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSI 77
EEQ + +E F+ D + DG ++ EL S+ P E +L D I
Sbjct: 6 EEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLG----------QNPTE--AELQDMI 52
Query: 78 FEKFDLDSSGSIDLHEFSAEMKKIM 102
E D D G+ID EF M + M
Sbjct: 53 NE-VDADGDGTIDFPEFLTMMARKM 76
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 25.8 bits (55), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 13/76 (17%)
Query: 27 EIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSIFEKFDLDSS 86
E F+ D + DG ++ EL S+ P E +L D I E D D +
Sbjct: 10 EAFSLFDKDGDGTITTKELGTVMRSLG----------QNPTE--AELQDMINE-VDADGN 56
Query: 87 GSIDLHEFSAEMKKIM 102
G+ID EF M + M
Sbjct: 57 GTIDFPEFLTMMARKM 72
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium
Regulatory Domain (Cld) From Soybean Calcium-Dependent
Protein Kinase- Alpha (Cdpk)
Length = 87
Score = 25.8 bits (55), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 17/73 (23%), Positives = 32/73 (43%), Gaps = 13/73 (17%)
Query: 24 SVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSIFEKFDL 83
++E+F +D +N G ++ EL+ + + E + + + D+
Sbjct: 24 GLKELFKMIDTDNSGTITFDELKDGLKRV-------------GSELMESEIKDLMDAADI 70
Query: 84 DSSGSIDLHEFSA 96
D SG+ID EF A
Sbjct: 71 DKSGTIDYGEFIA 83
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 25.8 bits (55), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 14/85 (16%)
Query: 18 EEQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSI 77
EEQ + +E F+ D + DG ++ EL S+ P E +L D I
Sbjct: 6 EEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLG----------QNPTE--AELQDMI 52
Query: 78 FEKFDLDSSGSIDLHEFSAEMKKIM 102
E D D +G+ID EF M + M
Sbjct: 53 NE-VDADGNGTIDFPEFLTMMARKM 76
>pdb|3QVM|A Chain A, The Structure Of Olei00960, A Hydrolase From Oleispira
Antarctica
pdb|3QVM|B Chain B, The Structure Of Olei00960, A Hydrolase From Oleispira
Antarctica
Length = 282
Score = 25.8 bits (55), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 19 EQFKKSVEEIFAALDLNNDGVLSRS 43
E + K VEEI ALDL N ++ S
Sbjct: 82 EGYAKDVEEILVALDLVNVSIIGHS 106
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 25.4 bits (54), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 14/83 (16%)
Query: 18 EEQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSI 77
EEQ + +E F+ D + DG ++ EL S+ P E +L D I
Sbjct: 6 EEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLG----------QNPTE--AELQDMI 52
Query: 78 FEKFDLDSSGSIDLHEFSAEMKK 100
E D D +G+ID EF M +
Sbjct: 53 NE-VDADGNGTIDFPEFLTMMAR 74
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 25.4 bits (54), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 14/83 (16%)
Query: 18 EEQFKKSVEEIFAALDLNNDGVLSRSELRKAFESMRLIETHFGVDVATPPEQLTKLYDSI 77
EEQ + +E F+ D + DG ++ EL S+ P E +L D I
Sbjct: 7 EEQIAE-FKEAFSLFDKDGDGTITTKELGTVMRSLG----------QNPTE--AELQDMI 53
Query: 78 FEKFDLDSSGSIDLHEFSAEMKK 100
E D D +G+ID EF M +
Sbjct: 54 NE-VDADGNGTIDFPEFLTMMAR 75
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.315 0.133 0.359
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,792,524
Number of Sequences: 62578
Number of extensions: 134863
Number of successful extensions: 795
Number of sequences better than 100.0: 202
Number of HSP's better than 100.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 108
Number of HSP's that attempted gapping in prelim test: 604
Number of HSP's gapped (non-prelim): 276
length of query: 142
length of database: 14,973,337
effective HSP length: 89
effective length of query: 53
effective length of database: 9,403,895
effective search space: 498406435
effective search space used: 498406435
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 46 (22.3 bits)