BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032360
(142 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P83877|TXN4A_MOUSE Thioredoxin-like protein 4A OS=Mus musculus GN=Txnl4a PE=2 SV=1
Length = 142
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 120/142 (84%), Positives = 135/142 (95%)
Query: 1 MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLSSVAETIKNFAVIYL 60
MSY+LPHLH+GW VDQAIL+EE+R+VVIRFGHDWD TCM+MDEVL S+AE +KNFAVIYL
Sbjct: 1 MSYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL 60
Query: 61 VDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVY 120
VDI+EVPDFN MYELYDP TVMFFFRNKHIMIDLGTGNNNKINWA++DKQE +DI+ETVY
Sbjct: 61 VDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVY 120
Query: 121 RGARKGRGLVIAPKDYSTKYRY 142
RGARKGRGLV++PKDYSTKYRY
Sbjct: 121 RGARKGRGLVVSPKDYSTKYRY 142
>sp|P83876|TXN4A_HUMAN Thioredoxin-like protein 4A OS=Homo sapiens GN=TXNL4A PE=1 SV=1
Length = 142
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 120/142 (84%), Positives = 135/142 (95%)
Query: 1 MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLSSVAETIKNFAVIYL 60
MSY+LPHLH+GW VDQAIL+EE+R+VVIRFGHDWD TCM+MDEVL S+AE +KNFAVIYL
Sbjct: 1 MSYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL 60
Query: 61 VDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVY 120
VDI+EVPDFN MYELYDP TVMFFFRNKHIMIDLGTGNNNKINWA++DKQE +DI+ETVY
Sbjct: 61 VDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVY 120
Query: 121 RGARKGRGLVIAPKDYSTKYRY 142
RGARKGRGLV++PKDYSTKYRY
Sbjct: 121 RGARKGRGLVVSPKDYSTKYRY 142
>sp|P87215|DIMI_SCHPO Mitosis protein dim1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=dim1 PE=1 SV=1
Length = 142
Score = 238 bits (608), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 108/142 (76%), Positives = 126/142 (88%)
Query: 1 MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLSSVAETIKNFAVIYL 60
MSY LPHLHSGW VDQAIL+E+ERLVVIRFG D DE C++ DEVL +AE + N AVIYL
Sbjct: 1 MSYFLPHLHSGWHVDQAILSEQERLVVIRFGRDHDEECIKQDEVLYRIAEKVVNMAVIYL 60
Query: 61 VDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVY 120
VDI EVPDFN MYELYD +T+MFF+RNKH+MIDLGTGNNNKINW L+DKQE IDI+ET++
Sbjct: 61 VDIDEVPDFNKMYELYDRTTIMFFYRNKHMMIDLGTGNNNKINWPLEDKQEMIDIIETIF 120
Query: 121 RGARKGRGLVIAPKDYSTKYRY 142
RGARKG+GLVI+PKDYST++RY
Sbjct: 121 RGARKGKGLVISPKDYSTRHRY 142
>sp|Q75BD8|DIB1_ASHGO Spliceosomal protein DIB1 OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DIB1 PE=3 SV=1
Length = 143
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 91/138 (65%), Positives = 112/138 (81%)
Query: 2 SYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLSSVAETIKNFAVIYLV 61
S LPHLHSGW VDQAI+ EEERLVVIRFG D D +CM MDE+L S+AE + NFA IY+
Sbjct: 3 SVFLPHLHSGWHVDQAIVTEEERLVVIRFGSDSDRSCMLMDEILYSIAEKVVNFAAIYVC 62
Query: 62 DISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVYR 121
D +EVPDFN MYEL DP TVMFF++NKH+ D GTGNNNK+N+ + +KQE IDI+ETV+R
Sbjct: 63 DTTEVPDFNEMYELQDPMTVMFFYKNKHMRCDFGTGNNNKMNFVVDNKQEMIDIIETVFR 122
Query: 122 GARKGRGLVIAPKDYSTK 139
GAR+ +GLV++P DY+ K
Sbjct: 123 GARRNKGLVVSPYDYNYK 140
>sp|Q06819|DIB1_YEAST Spliceosomal protein DIB1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=DIB1 PE=1 SV=1
Length = 143
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 90/138 (65%), Positives = 110/138 (79%)
Query: 2 SYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLSSVAETIKNFAVIYLV 61
S LLP L +GW VDQAI+ E +RLVVIRFG D CM MDE+LSS+AE ++NFAVIYL
Sbjct: 3 SVLLPQLRTGWHVDQAIVTETKRLVVIRFGRKNDRQCMIMDELLSSIAERVRNFAVIYLC 62
Query: 62 DISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVYR 121
DI EV DF+ MYEL DP TVMFF+ NKH+M D GTGNNNK+N+ + DKQE IDI+ET++R
Sbjct: 63 DIDEVSDFDEMYELTDPMTVMFFYHNKHMMCDFGTGNNNKLNFIVDDKQEMIDILETIFR 122
Query: 122 GARKGRGLVIAPKDYSTK 139
GARK +GLV++P DY+ K
Sbjct: 123 GARKNKGLVVSPYDYNHK 140
>sp|Q553S5|TXN4A_DICDI Thioredoxin-like protein 4A homolog OS=Dictyostelium discoideum
GN=txnl4a PE=3 SV=4
Length = 160
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 83/132 (62%), Positives = 112/132 (84%)
Query: 11 GWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLSSVAETIKNFAVIYLVDISEVPDFN 70
G + + + EE+R+VVIRFGHD++ CM+ D++L+S+AE +KN AVIY+VDI+EVPD N
Sbjct: 2 GGLLIKQLSTEEDRVVVIRFGHDYNPECMKQDDILASIAEKVKNMAVIYVVDITEVPDLN 61
Query: 71 TMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVYRGARKGRGLV 130
+MYELYD MFF+RNKHIM+DLGTGNNNKINWAL +KQ+ IDI+ETVY+GARKG+GLV
Sbjct: 62 SMYELYDDCPTMFFYRNKHIMVDLGTGNNNKINWALTNKQDMIDIIETVYKGARKGKGLV 121
Query: 131 IAPKDYSTKYRY 142
+P+D+S +Y++
Sbjct: 122 NSPRDFSPQYKF 133
>sp|Q6FMI2|DIB1_CANGA Spliceosomal protein DIB1 OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=DIB1 PE=3
SV=1
Length = 142
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 86/136 (63%), Positives = 107/136 (78%)
Query: 4 LLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLSSVAETIKNFAVIYLVDI 63
L +LHSGW VDQAI+ EEERLVV+RFG D CM MDE+L+SVAE ++NF IYL DI
Sbjct: 3 FLYNLHSGWHVDQAIVTEEERLVVVRFGRTADRECMLMDEMLASVAEKVRNFVAIYLCDI 62
Query: 64 SEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVYRGA 123
EVPDFN MYEL D +MFF++NKH+M D GTGNNNK+N+ DKQE IDI+ET++RGA
Sbjct: 63 DEVPDFNDMYELNDNMCLMFFYKNKHMMCDFGTGNNNKMNFLPDDKQELIDIMETIFRGA 122
Query: 124 RKGRGLVIAPKDYSTK 139
RK +G+V++P DY+ K
Sbjct: 123 RKNKGIVVSPYDYNHK 138
>sp|Q9NX01|TXN4B_HUMAN Thioredoxin-like protein 4B OS=Homo sapiens GN=TXNL4B PE=1 SV=1
Length = 149
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 90/136 (66%), Gaps = 2/136 (1%)
Query: 1 MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLSSVAETIKNFAVIYL 60
MS+LLP L S VDQAI + E+++V+RFG D D C+Q+D++LS + + A IYL
Sbjct: 1 MSFLLPKLTSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYL 60
Query: 61 VDISEVPDFNTMYEL-YDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETV 119
VD+ + + +++ Y PSTV FFF +H+ +D G+ ++ K + K KQ+FID++E +
Sbjct: 61 VDVDQTAVYTQYFDISYIPSTV-FFFNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVI 119
Query: 120 YRGARKGRGLVIAPKD 135
YRGA +G+ +V +P D
Sbjct: 120 YRGAMRGKLIVQSPID 135
>sp|Q8BUH1|TXN4B_MOUSE Thioredoxin-like protein 4B OS=Mus musculus GN=Txnl4b PE=2 SV=1
Length = 149
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 89/143 (62%), Gaps = 2/143 (1%)
Query: 1 MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLSSVAETIKNFAVIYL 60
MS+LLP L S VDQAI + E+ +V+RFG D D C+Q+D++LS + + A IYL
Sbjct: 1 MSFLLPKLTSKKEVDQAIKSTAEKGLVLRFGRDEDPVCLQLDDILSKTSADLSKMAAIYL 60
Query: 61 VDISEVPDFNTMYEL-YDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETV 119
D+ P + +++ Y PSTV FFF +H+ D G+ ++ K + K KQ+FID++E +
Sbjct: 61 GDVDHTPVYTQYFDISYIPSTV-FFFNGQHMKGDYGSPDHTKFVGSFKTKQDFIDLIEVI 119
Query: 120 YRGARKGRGLVIAPKDYSTKYRY 142
YRGA +G+ +V +P D +Y
Sbjct: 120 YRGAMRGKLIVQSPIDPKNVPKY 142
>sp|Q5R9M3|THIO_PONAB Thioredoxin OS=Pongo abelii GN=TXN PE=3 SV=3
Length = 106
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 3/106 (2%)
Query: 4 LLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLSSVAETIKNFAVIYL-VD 62
++ + S A +A+ A ++LVV+ F W C + S++E N VI+L VD
Sbjct: 1 MVKQIESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN--VIFLEVD 58
Query: 63 ISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKD 108
+ + D + E+ T FFF+ + + N K+ + +
Sbjct: 59 VDDCQDVASECEVKCMPTFQFFFKKGQKVGEFSGANKEKLEATINE 104
>sp|O76003|GLRX3_HUMAN Glutaredoxin-3 OS=Homo sapiens GN=GLRX3 PE=1 SV=2
Length = 335
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 25 LVVIRFGHDWDETCMQMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFF 84
L+V+ F W C QM+EV++ +A+ + + + L + VP+ + YE+ T +FF
Sbjct: 33 LLVVHFWAPWAPQCAQMNEVMAELAKELPQVSFVKL-EAEGVPEVSEKYEISSVPTFLFF 91
Query: 85 FRNKHI 90
++ I
Sbjct: 92 KNSQKI 97
>sp|Q28ID3|GLRX3_XENTR Glutaredoxin-3 OS=Xenopus tropicalis GN=glrx3 PE=2 SV=2
Length = 326
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 10 SGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLSSVAETIKNFAVIYLVDISEVPDF 69
S +Q I + L V+ F W C QM+EV++ +A+ + L + VP+
Sbjct: 9 SAGQFEQLIQNSAKSLTVVHFWAPWAPQCTQMNEVMAELAKEQPQVMFVKL-EAEAVPEV 67
Query: 70 NTMYELYDPSTVMFFFRNKHI 90
+ YE+ T +FF ++ I
Sbjct: 68 SEKYEVTSVPTFLFFKNSQKI 88
>sp|P47938|THIO1_DROME Thioredoxin-1 OS=Drosophila melanogaster GN=dhd PE=1 SV=1
Length = 107
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 43/92 (46%)
Query: 16 QAILAEEERLVVIRFGHDWDETCMQMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYEL 75
+ I A +++L+V+ F W C +M+ + S+A + AV+ +D+ + + Y++
Sbjct: 12 KRIEAADDKLIVLDFYATWCGPCKEMESTVKSLARKYSSKAVVLKIDVDKFEELTERYKV 71
Query: 76 YDPSTVMFFFRNKHIMIDLGTGNNNKINWALK 107
T +F +N+ + G + N K
Sbjct: 72 RSMPTFVFLRQNRRLASFAGADEHKLTNMMAK 103
>sp|Q58DA7|GLRX3_BOVIN Glutaredoxin-3 OS=Bos taurus GN=GLRX3 PE=2 SV=1
Length = 334
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 25 LVVIRFGHDWDETCMQMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFF 84
L+V+ F W C QM++V++ +A+ + + + L + VP+ + YE+ T +FF
Sbjct: 32 LLVVHFWAPWAPQCAQMNDVMAELAKEHQQVSFVKL-EAEAVPEVSEKYEISSVPTFLFF 90
Query: 85 FRNKHI 90
++ I
Sbjct: 91 KNSQKI 96
>sp|P82460|THIO_PIG Thioredoxin OS=Sus scrofa GN=TXN PE=1 SV=3
Length = 105
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 4 LLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLSSVAETIKNFAVIYL-VD 62
++ + S +A +A+ + E+LVV+ F W C + S++E N V++L VD
Sbjct: 1 MVKQIESKYAFQEALNSAGEKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN--VVFLEVD 58
Query: 63 ISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKD 108
+ + D + E+ T FF + + + + N K+ + +
Sbjct: 59 VDDCQDVASECEVKCMPTFQFFKKGQKVG-EFSGANKEKLEATINE 103
>sp|P32642|GLRX4_YEAST Monothiol glutaredoxin-4 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=GRX4 PE=1 SV=1
Length = 244
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 24 RLVVIRFGHDWDETCMQMDEVLSSVAETIKNFAVIYL-VDISEVPDFNTMYEL 75
+L+V+ F W + C M +VL +V+E ++ V +L +D E P+ + ++E+
Sbjct: 23 KLIVLYFKAQWADPCKTMSQVLEAVSEKVRQEDVRFLSIDADEHPEISDLFEI 75
>sp|P50413|THIO_SHEEP Thioredoxin OS=Ovis aries GN=TXN PE=1 SV=2
Length = 105
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 48/106 (45%), Gaps = 4/106 (3%)
Query: 4 LLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLSSVAETIKNFAVIYL-VD 62
++ + S +A +A+ + E+LVV+ F W C + S++E N V++L VD
Sbjct: 1 MVKQIESKYAFQEALNSAGEKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN--VVFLEVD 58
Query: 63 ISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKD 108
+ + D E+ T FF + + + + N K+ + +
Sbjct: 59 VDDCQDVAAECEVKCMPTFQFFKKGQKVS-EFSGANKEKLEATINE 103
>sp|P60226|THIO1_DROYA Thioredoxin-1 OS=Drosophila yakuba GN=dhd PE=2 SV=2
Length = 107
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 41/92 (44%)
Query: 16 QAILAEEERLVVIRFGHDWDETCMQMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYEL 75
+ I A +++L+V+ F +W C M+ + S+A AV+ +D+ + + Y++
Sbjct: 12 KRIEAADDKLIVLDFYANWCGPCKDMESTVKSLARKYSTKAVVLKIDVDKFEELTERYKV 71
Query: 76 YDPSTVMFFFRNKHIMIDLGTGNNNKINWALK 107
T +F N+ + G + N K
Sbjct: 72 RSMPTFVFLRNNRRLAAFSGADEHKLTNMMAK 103
>sp|O97680|THIO_BOVIN Thioredoxin OS=Bos taurus GN=TXN PE=3 SV=3
Length = 105
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 48/106 (45%), Gaps = 4/106 (3%)
Query: 4 LLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLSSVAETIKNFAVIYL-VD 62
++ + S +A +A+ + E+LVV+ F W C + S++E N V++L VD
Sbjct: 1 MVKQIESKYAFQEALNSAGEKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN--VVFLEVD 58
Query: 63 ISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKD 108
+ + D E+ T FF + + + + N K+ + +
Sbjct: 59 VDDCQDVAAECEVKCMPTFQFFKKGQKVG-EFSGANKEKLEATINE 103
>sp|O97508|THIO_HORSE Thioredoxin OS=Equus caballus GN=TXN PE=3 SV=3
Length = 105
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 4/105 (3%)
Query: 4 LLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLSSVAETIKNFAVIYL-VD 62
++ + S A +A+ + E+LVV+ F W C + S++E N V++L VD
Sbjct: 1 MVKQIESKSAFQEALNSAGEKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN--VVFLEVD 58
Query: 63 ISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALK 107
+ + D E+ T FF + + + + N K+ +K
Sbjct: 59 VDDCQDVAAECEVKCMPTFQFFKKGQKV-DEFSGANKEKLEATIK 102
>sp|Q6H7E4|TRXM1_ORYSJ Thioredoxin M1, chloroplastic OS=Oryza sativa subsp. japonica
GN=Os02g0639900 PE=2 SV=1
Length = 173
Score = 35.8 bits (81), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 2 SYLLPHL-HSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLSSVAETIKNFAVIYL 60
S+ +P + S W Q+++ E E V++ F W C +D V+ +++ + Y
Sbjct: 65 SFQVPDVTKSTW---QSLVVESELPVLVEFWASWCGPCKMIDPVIGKLSKEYEGKLNCYK 121
Query: 61 VDISEVPDFNTMYELYDPSTVMFF 84
++ E PD T + + T+M F
Sbjct: 122 LNTDENPDIATQFGIRSIPTMMIF 145
>sp|Q1BFN7|PCKG_MYCSS Phosphoenolpyruvate carboxykinase [GTP] OS=Mycobacterium sp.
(strain MCS) GN=pckG PE=3 SV=1
Length = 609
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 25/135 (18%)
Query: 6 PHLHSG---WAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLSSVAETIKNFAVIYLVD 62
P H G W + A L + +R+V F +E C ++ E L K
Sbjct: 13 PTEHEGLLAWVREVAELTQPDRVV---FTDGSEEECARLTEQLCEAGTFQK--------- 60
Query: 63 ISEVPDFNTMYELYDPSTVMFFFRNKHIM----IDLGTGNNNKINWALKDKQEFIDIVET 118
++E N+ L DPS V +I ID G NN W D E I+
Sbjct: 61 LNEEKKPNSYLALSDPSDVARVESRTYICSEREIDAGPTNN----WM--DPAEMRGIMTD 114
Query: 119 VYRGARKGRGLVIAP 133
+YRG+ +GR + + P
Sbjct: 115 LYRGSMRGRTMYVVP 129
>sp|A1U995|PCKG_MYCSK Phosphoenolpyruvate carboxykinase [GTP] OS=Mycobacterium sp.
(strain KMS) GN=pckG PE=3 SV=1
Length = 609
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 25/135 (18%)
Query: 6 PHLHSG---WAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLSSVAETIKNFAVIYLVD 62
P H G W + A L + +R+V F +E C ++ E L K
Sbjct: 13 PTEHEGLLAWVREVAELTQPDRVV---FTDGSEEECARLTEQLCEAGTFQK--------- 60
Query: 63 ISEVPDFNTMYELYDPSTVMFFFRNKHIM----IDLGTGNNNKINWALKDKQEFIDIVET 118
++E N+ L DPS V +I ID G NN W D E I+
Sbjct: 61 LNEEKKPNSYLALSDPSDVARVESRTYICSEREIDAGPTNN----WM--DPAEMRGIMTD 114
Query: 119 VYRGARKGRGLVIAP 133
+YRG+ +GR + + P
Sbjct: 115 LYRGSMRGRTMYVVP 129
>sp|A3PSV1|PCKG_MYCSJ Phosphoenolpyruvate carboxykinase [GTP] OS=Mycobacterium sp.
(strain JLS) GN=pckG PE=3 SV=1
Length = 609
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 25/135 (18%)
Query: 6 PHLHSG---WAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLSSVAETIKNFAVIYLVD 62
P H G W + A L + +R+V F +E C ++ E L K
Sbjct: 13 PTEHEGLLAWVREVAELTQPDRVV---FTDGSEEECARLTEQLCEAGTFQK--------- 60
Query: 63 ISEVPDFNTMYELYDPSTVMFFFRNKHIM----IDLGTGNNNKINWALKDKQEFIDIVET 118
++E N+ L DPS V +I ID G NN W D E I+
Sbjct: 61 LNEEKKPNSYLALSDPSDVARVESRTYICSEREIDAGPTNN----WM--DPAEMRGIMTD 114
Query: 119 VYRGARKGRGLVIAP 133
+YRG+ +GR + + P
Sbjct: 115 LYRGSMRGRTMYVVP 129
>sp|Q8L7S9|TRXY2_ARATH Thioredoxin Y2, chloroplastic OS=Arabidopsis thaliana GN=At1g43560
PE=1 SV=1
Length = 167
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 32/67 (47%)
Query: 18 ILAEEERLVVIRFGHDWDETCMQMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYD 77
+L ++ V++ F W C M +L+ V+ET+K+ + +D + P Y++
Sbjct: 71 LLQNSDKPVLVDFYATWCGPCQLMVPILNEVSETLKDIIAVVKIDTEKYPSLANKYQIEA 130
Query: 78 PSTVMFF 84
T + F
Sbjct: 131 LPTFILF 137
>sp|Q9R6P9|THIO_MYCGA Thioredoxin OS=Mycoplasma gallisepticum (strain R(low / passage 15
/ clone 2)) GN=trxA PE=3 SV=2
Length = 100
Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 5 LPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLSSVAETIKNFAVIYLVDIS 64
+ H+ + +DQ L + VV+ F +W C + + VA+ K++ + VD+
Sbjct: 1 MKHITNKAELDQ--LLSTNKKVVVDFYANWCGPCKILGPIFEEVAQDKKDWTFVK-VDVD 57
Query: 65 EVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALK 107
+ + ++ YE+ TV+FF K +G N++ LK
Sbjct: 58 QANEISSEYEIRSIPTVIFFQDGKMADKRIGFIPKNELKELLK 100
>sp|Q8IFW4|THIOT_DROME Thioredoxin-T OS=Drosophila melanogaster GN=TrxT PE=2 SV=1
Length = 157
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 33/71 (46%)
Query: 14 VDQAILAEEERLVVIRFGHDWDETCMQMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMY 73
+DQ ++ E++LVVI F DW C + L +A + V+ V++ E D Y
Sbjct: 11 LDQQLILAEDKLVVIDFYADWCGPCKIIAPKLDELAHEYSDRVVVLKVNVDENEDITVEY 70
Query: 74 ELYDPSTVMFF 84
+ T +F
Sbjct: 71 NVNSMPTFVFI 81
>sp|Q7XSQ7|TRL33_ORYSJ Thioredoxin-like 3-3 OS=Oryza sativa subsp. japonica
GN=Os04g0560200 PE=2 SV=2
Length = 129
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 32/79 (40%), Gaps = 3/79 (3%)
Query: 19 LAEEERLVVIRFGHDWDETCMQMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDP 78
L + VI +G W C Q+ + KN IY DI E P+ T Y P
Sbjct: 42 LKSSKSPAVINYGASWCRVCSQILPPFCRFSNEFKNLTFIY-ADIDECPE-TTQNIRYTP 99
Query: 79 STVMFFFRNKHIMIDLGTG 97
T F+ + + LGTG
Sbjct: 100 -TFHFYRDGEKVDEMLGTG 117
>sp|P07591|TRXM_SPIOL Thioredoxin M-type, chloroplastic OS=Spinacia oleracea PE=1 SV=2
Length = 181
Score = 32.7 bits (73), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 28/64 (43%)
Query: 21 EEERLVVIRFGHDWDETCMQMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPST 80
E E V++ F W C + V+ +A+ +Y ++ E P T Y + T
Sbjct: 90 ESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPT 149
Query: 81 VMFF 84
V+FF
Sbjct: 150 VLFF 153
>sp|P37395|THIO_CYACA Thioredoxin OS=Cyanidium caldarium GN=trxA PE=3 SV=1
Length = 107
Score = 32.3 bits (72), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 36/85 (42%)
Query: 23 ERLVVIRFGHDWDETCMQMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVM 82
E+LV++ F W C + V+ +A+ I ++ E P + Y + T+M
Sbjct: 20 EKLVLVDFWAPWCGPCRMISPVIDELAQEYVEQVKIVKINTDENPSISAEYGIRSIPTLM 79
Query: 83 FFFRNKHIMIDLGTGNNNKINWALK 107
F K + +G + + ALK
Sbjct: 80 LFKDGKRVDTVIGAVPKSTLTNALK 104
>sp|Q73TS2|PCKG_MYCPA Phosphoenolpyruvate carboxykinase [GTP] OS=Mycobacterium
paratuberculosis (strain ATCC BAA-968 / K-10) GN=pckG
PE=3 SV=1
Length = 609
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Query: 60 LVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETV 119
L ++E N+ L DPS V +I + +G NW D E I+ +
Sbjct: 58 LKKLNEKKHPNSYLALSDPSDVARVESRTYICTEEESGAGPTNNWM--DPTEMRSIMTDL 115
Query: 120 YRGARKGRGLVIAP 133
YRG +GR + + P
Sbjct: 116 YRGCMRGRTMWVVP 129
>sp|P10472|THIO_CHLLT Thioredoxin OS=Chlorobium limicola f.sp. thiosulfatophilum
GN=trxA PE=1 SV=5
Length = 108
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/73 (20%), Positives = 34/73 (46%)
Query: 16 QAILAEEERLVVIRFGHDWDETCMQMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYEL 75
Q + + ++ V++ F W CM + V+ +A+ + A+I +++ E P+ Y +
Sbjct: 13 QTEILDSDKAVLVDFWASWCGPCMMLGPVIEQLADDYEGKAIIAKLNVDENPNIAGQYGI 72
Query: 76 YDPSTVMFFFRNK 88
T++ K
Sbjct: 73 RSIPTMLIIKGGK 85
>sp|Q7X8R5|TRXM2_ORYSJ Thioredoxin M2, chloroplastic OS=Oryza sativa subsp. japonica
GN=Os04g0530600 PE=2 SV=2
Length = 180
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/69 (23%), Positives = 33/69 (47%)
Query: 16 QAILAEEERLVVIRFGHDWDETCMQMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYEL 75
Q+++ E E V++ + W C +D V+ +++ + Y ++ E PD + Y +
Sbjct: 84 QSLVMESELPVLVGYWATWCGPCKMIDPVVGKLSKEYEGKLKCYKLNTDENPDIASQYGV 143
Query: 76 YDPSTVMFF 84
T+M F
Sbjct: 144 RSIPTMMIF 152
>sp|Q39362|TRXH2_BRANA Thioredoxin H-type 2 OS=Brassica napus GN=THL-2 PE=2 SV=1
Length = 119
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 27/55 (49%)
Query: 12 WAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLSSVAETIKNFAVIYLVDISEV 66
WAV + +L+VI F W C + V + +A+ + A+ + VD+ E+
Sbjct: 17 WAVQLDTAKQSNKLIVIDFTASWCPPCRMIAPVFADLAKKFMSSAIFFKVDVDEL 71
>sp|Q39239|TRXH4_ARATH Thioredoxin H4 OS=Arabidopsis thaliana GN=TRX4 PE=3 SV=2
Length = 119
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 28/60 (46%)
Query: 7 HLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLSSVAETIKNFAVIYLVDISEV 66
H + W V E +L+VI F W C + + + +A+ + A+ + VD+ E+
Sbjct: 12 HTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAIFFKVDVDEL 71
>sp|Q03835|GLRX3_YEAST Monothiol glutaredoxin-3 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=GRX3 PE=1 SV=1
Length = 285
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 49/108 (45%), Gaps = 12/108 (11%)
Query: 20 AEEERLVVIRFGHDWDETCMQMDEVLSSVAETIKNFAVIYL-VDISEVPDFNTMYELYDP 78
A ++L+V+ F W E C + +V +++ N V +L +D E + + ++E+
Sbjct: 54 AAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENSEISELFEI--- 110
Query: 79 STVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVYRGARKG 126
S V +F I+I GT + D +E++ ++E G
Sbjct: 111 SAVPYF-----IIIHKGTILK---ELSGADPKEYVSLLEDCKNSVNSG 150
>sp|Q9PR63|GYRA_UREPA DNA gyrase subunit A OS=Ureaplasma parvum serovar 3 (strain ATCC
700970) GN=gyrA PE=3 SV=1
Length = 840
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 15/68 (22%)
Query: 45 LSSVAETIKNFAVIYLVDISEV------PDFNTMYELYDPSTVMFFF---------RNKH 89
L+ V + IK +A + V ISE+ PDF T E+Y S ++ +F R+K+
Sbjct: 204 LTEVCQAIKAYAKNHNVTISEIMEYLKGPDFPTGAEIYGDSGIIKYFNTGRGSVTIRSKY 263
Query: 90 IMIDLGTG 97
+ D+G G
Sbjct: 264 EIEDIGQG 271
>sp|Q75GM1|TRXH5_ORYSJ Thioredoxin H5 OS=Oryza sativa subsp. japonica GN=Os05g0480200 PE=2
SV=1
Length = 135
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Query: 9 HSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLSSVAETIKNFAVIYL-VDISEVP 67
W +AE + VV++F W C + + ++ +K ++++ VD+ E+P
Sbjct: 28 QKNWDNTMEEVAEHGKTVVLKFSAIWCTPCRNAAPLFAELS--LKYPDIVFVSVDVDEMP 85
Query: 68 DFNTMYELYDPSTVMFFFRNKHI 90
+ T Y++ T +F N+ I
Sbjct: 86 ELVTQYDVRATPTFIFMKNNEEI 108
>sp|P42115|THIO_NEUCR Thioredoxin OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A
/ CBS 708.71 / DSM 1257 / FGSC 987) GN=trx PE=3 SV=1
Length = 127
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 4/95 (4%)
Query: 1 MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLSSVAET--IKNFAVI 58
MS + H++S A + A L + VV F DW C + + + A+T I NF
Sbjct: 1 MSDGVKHINS--AQEFANLLNTTQYVVADFYADWCGPCKAIAPMYAQFAKTFSIPNFLAF 58
Query: 59 YLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMID 93
+++ V Y + T +FF K + ++
Sbjct: 59 AKINVDSVQQVAQHYRVSAMPTFLFFKNGKQVAVN 93
>sp|P85801|TRXH_POPJC Thioredoxin H-type OS=Populus jackii PE=1 SV=1
Length = 139
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Query: 20 AEEERLVVIRFGHDWDETCMQMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPS 79
+ + ++V+ F W C Q+ ++E + + ++D+ E+ DF+ +E+ +
Sbjct: 43 SRDGKIVLANFSARWCGPCKQIAPYYIELSENYPSL-MFLVIDVDELSDFSASWEIK--A 99
Query: 80 TVMFFFRNKHIMIDLGTGNN 99
T FFF +D G N
Sbjct: 100 TPTFFFLRDGQQVDKLVGAN 119
>sp|Q9V429|THIO2_DROME Thioredoxin-2 OS=Drosophila melanogaster GN=Trx-2 PE=1 SV=2
Length = 114
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 36/95 (37%), Gaps = 2/95 (2%)
Query: 7 HLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLSSVAETIKNFAVIYLVDISEV 66
H H +D + +LVV+ F W C + L ++ + V+ VD+ E
Sbjct: 12 HFHLQADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDEC 71
Query: 67 PDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNK 101
D Y + T F F + ++ G N K
Sbjct: 72 EDIAMEYNISSMPT--FVFLKNGVKVEEFAGANAK 104
>sp|Q8KE49|THIO2_CHLTE Thioredoxin-2 OS=Chlorobium tepidum (strain ATCC 49652 / DSM
12025 / TLS) GN=trx2 PE=3 SV=3
Length = 109
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Query: 13 AVDQAILAE---EERLVVIRFGHDWDETCMQMDEVLSSVAETIKNFAVIYLVDISEVPDF 69
A DQ AE +++ ++ F W CM + V+ +A + A+I +++ E P+
Sbjct: 8 ATDQNFQAEILNSDKVALVDFWAAWCGPCMMLGPVIEELAGDYEGKAIIAKLNVDENPNT 67
Query: 70 NTMYELYDPSTVMFFFRNK 88
Y + T++ K
Sbjct: 68 AGQYGIRSIPTMLIIKGGK 86
>sp|P02567|MYO1_CAEEL Myosin-1 OS=Caenorhabditis elegans GN=let-75 PE=2 SV=3
Length = 1938
Score = 30.0 bits (66), Expect = 4.1, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 25/45 (55%)
Query: 95 GTGNNNKINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTK 139
GT N +NW K+K D V +V + ++K LV +DY+T+
Sbjct: 584 GTVRYNVLNWLEKNKDPLNDTVVSVMKASKKNDLLVEIWQDYTTQ 628
>sp|P25053|TENI_BACSU Regulatory protein TenI OS=Bacillus subtilis (strain 168) GN=tenI
PE=1 SV=1
Length = 205
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Query: 6 PHLHSGWAV---DQAILAEEERLVVIRFGHDWDETCMQ 40
PHLH G +V ++A+ AE+E + FGH ++ C +
Sbjct: 93 PHLHIGRSVHSLEEAVQAEKEDADYVLFGHVFETDCKK 130
>sp|Q7XQQ2|TRXM3_ORYSJ Thioredoxin M3, chloroplastic OS=Oryza sativa subsp. japonica
GN=Os04g0430800 PE=2 SV=4
Length = 175
Score = 29.3 bits (64), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 14/59 (23%), Positives = 24/59 (40%)
Query: 26 VVIRFGHDWDETCMQMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFF 84
V+I F W C + ++ +A+ Y +D + P T Y + TV+ F
Sbjct: 86 VLIEFWASWCGPCRMVHRIVDEIAQEYAGRIKCYKLDTDDYPQVATSYSIERIPTVLLF 144
>sp|Q9FG36|TRL31_ARATH Thioredoxin-like 3-1, chloroplastic OS=Arabidopsis thaliana
GN=WCRKC1 PE=2 SV=3
Length = 210
Score = 29.3 bits (64), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 17 AILAEEERL---VVIRFGHDWDETCMQMDEVLSSVAETIKNFAVIYLVDISEVPD 68
A+L+ +L ++I + W C+ + L +A N A Y VD+++VP
Sbjct: 109 AVLSHARQLSQPIIIEWMASWCRKCIYLKPKLEKLAAEYNNRAKFYYVDVNKVPQ 163
>sp|Q07442|BDF2_YEAST Bromodomain-containing factor 2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=BDF2 PE=1 SV=1
Length = 638
Score = 29.3 bits (64), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 13/84 (15%)
Query: 37 TCMQMDEVLSSVAETIKNFAVIYLVDISEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGT 96
TC+++ +VL S + NF + VD + N + +P +DLGT
Sbjct: 325 TCLKILKVLMSKKNSDINFPFLQPVDPIALNLPNYFDVVKNP-------------MDLGT 371
Query: 97 GNNNKINWALKDKQEFIDIVETVY 120
+NN +NW K +F+D + V+
Sbjct: 372 ISNNLMNWKYKTIDQFVDDLNLVF 395
>sp|Q54DP7|MYBR_DICDI Myb-like protein R OS=Dictyostelium discoideum GN=mybR PE=4 SV=2
Length = 394
Score = 28.9 bits (63), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 8/65 (12%)
Query: 66 VPDFNTMYELYDPSTVMF----FFRNKHIMIDLGT-GNNNKINWALKDKQEFIDIVETVY 120
V +F + E+ PS V+ K +M+++ T GN ++INW KQ F+ + +
Sbjct: 307 VKNFKSTQEIIKPSPVISGNWSLDEQKALMVEVSTLGNKSEINWFFISKQLFL---KGIS 363
Query: 121 RGARK 125
R AR+
Sbjct: 364 RNARE 368
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.138 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,371,337
Number of Sequences: 539616
Number of extensions: 2188741
Number of successful extensions: 4755
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 4728
Number of HSP's gapped (non-prelim): 53
length of query: 142
length of database: 191,569,459
effective HSP length: 105
effective length of query: 37
effective length of database: 134,909,779
effective search space: 4991661823
effective search space used: 4991661823
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)