Query 032361
Match_columns 142
No_of_seqs 103 out of 462
Neff 7.0
Searched_HMMs 13730
Date Mon Mar 25 21:26:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032361.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/032361hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1q98a_ c.47.1.10 (A:) Thiol p 57.8 3.2 0.00023 27.5 2.7 25 102-126 124-148 (164)
2 d1psqa_ c.47.1.10 (A:) Probabl 51.2 5.3 0.00039 26.2 3.0 25 102-126 121-145 (163)
3 d1qxha_ c.47.1.10 (A:) Thiol p 50.1 5.5 0.0004 26.2 2.9 25 102-126 126-150 (164)
4 d1xvqa_ c.47.1.10 (A:) Thiol p 28.4 17 0.0012 23.6 2.6 17 109-125 130-146 (166)
5 d1jkna_ d.113.1.1 (A:) Diadeno 28.2 26 0.0019 22.5 3.5 28 104-131 12-40 (165)
6 d1zzoa1 c.47.1.10 (A:45-178) L 26.9 14 0.001 22.7 1.8 21 102-122 96-117 (134)
7 d2b5xa1 c.47.1.10 (A:1-143) th 24.7 19 0.0014 22.4 2.2 23 102-124 105-128 (143)
8 d1mzua_ d.110.3.1 (A:) PYP dom 24.7 21 0.0015 21.3 2.3 18 109-126 15-32 (110)
9 d1zofa1 c.47.1.10 (A:1-170) Th 24.4 35 0.0025 22.2 3.6 18 107-124 123-140 (170)
10 d2bmxa1 c.47.1.10 (A:2-170) Al 24.0 30 0.0022 22.2 3.2 21 103-125 129-149 (169)
11 d1xvwa1 c.47.1.10 (A:1-153) Pu 23.7 22 0.0016 22.3 2.4 20 103-124 113-132 (153)
12 d1g94a1 b.71.1.1 (A:355-448) B 23.6 14 0.0011 22.7 1.3 18 104-121 59-77 (94)
13 d2fy6a1 c.47.1.10 (A:33-175) P 23.3 20 0.0014 22.2 2.0 18 107-124 107-124 (143)
14 d1e2ya_ c.47.1.10 (A:) Trypare 23.1 29 0.0021 22.2 3.0 23 103-125 120-142 (167)
15 d2fkba1 d.113.1.2 (A:8-168) Hy 22.0 38 0.0028 21.5 3.4 24 103-126 28-51 (161)
16 d1lu4a_ c.47.1.10 (A:) Soluble 20.7 24 0.0017 21.7 2.0 17 108-124 101-117 (134)
17 d1wp0a1 c.47.1.10 (A:138-297) 20.3 18 0.0013 22.4 1.3 15 106-120 123-137 (160)
18 d1v9ya_ d.110.3.2 (A:) Direct 20.3 25 0.0018 19.9 1.9 18 109-126 13-30 (113)
19 d1z5ye1 c.47.1.10 (E:49-184) T 20.2 25 0.0018 21.5 2.0 16 109-124 97-112 (136)
No 1
>d1q98a_ c.47.1.10 (A:) Thiol peroxidase Tpx {Haemophilus influenzae [TaxId: 727]}
Probab=57.78 E-value=3.2 Score=27.54 Aligned_cols=25 Identities=12% Similarity=0.070 Sum_probs=20.1
Q ss_pred cccccEEEEEEEEeCCeEEEEEEEe
Q 032361 102 RYGTRSTSSLYVKSNGEVYFYERHL 126 (142)
Q Consensus 102 ~YGTRs~TvilVd~~g~v~f~Er~~ 126 (142)
.+|.-+.++.+||++|.+.|.|+.-
T Consensus 124 ~~g~~~Ra~fvID~~G~I~y~~~~~ 148 (164)
T d1q98a_ 124 LAGLTSRAVIVLDEQNNVLHSQLVE 148 (164)
T ss_dssp TTTSBCCEEEEECTTSBEEEEEECS
T ss_pred cccCcccEEEEECCCCEEEEEEECC
Confidence 4665556789999999999999854
No 2
>d1psqa_ c.47.1.10 (A:) Probable thiol peroxidase PsaD {Streptococcus pneumoniae [TaxId: 1313]}
Probab=51.16 E-value=5.3 Score=26.22 Aligned_cols=25 Identities=4% Similarity=0.121 Sum_probs=18.4
Q ss_pred cccccEEEEEEEEeCCeEEEEEEEe
Q 032361 102 RYGTRSTSSLYVKSNGEVYFYERHL 126 (142)
Q Consensus 102 ~YGTRs~TvilVd~~g~v~f~Er~~ 126 (142)
.||.-..++++||++|.+.|.+..-
T Consensus 121 ~~~~~~Ra~fvID~~G~I~y~~~~~ 145 (163)
T d1psqa_ 121 EWHLLARAVFVLDTDNTIRYVEYVD 145 (163)
T ss_dssp TTCSBCCEEEEECTTCBEEEEEECS
T ss_pred cccceeEEEEEECCCCEEEEEEEcC
Confidence 3443333679999999999998743
No 3
>d1qxha_ c.47.1.10 (A:) Thiol peroxidase Tpx {Escherichia coli [TaxId: 562]}
Probab=50.07 E-value=5.5 Score=26.21 Aligned_cols=25 Identities=16% Similarity=0.162 Sum_probs=19.0
Q ss_pred cccccEEEEEEEEeCCeEEEEEEEe
Q 032361 102 RYGTRSTSSLYVKSNGEVYFYERHL 126 (142)
Q Consensus 102 ~YGTRs~TvilVd~~g~v~f~Er~~ 126 (142)
.+|.-+.++.+||++|++.|.+..-
T Consensus 126 ~~g~~~ra~fvID~~G~I~y~~~~~ 150 (164)
T d1qxha_ 126 LKGLAARAVVVIDENDNVIFSQLVD 150 (164)
T ss_dssp TTTSBCCEEEEECTTSBEEEEEECS
T ss_pred ccCcccCEEEEEcCCCEEEEEEEcC
Confidence 4554445679999999999988743
No 4
>d1xvqa_ c.47.1.10 (A:) Thiol peroxidase Tpx {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=28.41 E-value=17 Score=23.57 Aligned_cols=17 Identities=18% Similarity=0.327 Sum_probs=14.8
Q ss_pred EEEEEEeCCeEEEEEEE
Q 032361 109 SSLYVKSNGEVYFYERH 125 (142)
Q Consensus 109 TvilVd~~g~v~f~Er~ 125 (142)
++++||++|++.|.+..
T Consensus 130 a~fvID~~G~I~y~~~~ 146 (166)
T d1xvqa_ 130 AIVVIGADGNVAYTELV 146 (166)
T ss_dssp EEEEECTTSBEEEEEEC
T ss_pred EEEEEeCCCEEEEEEEc
Confidence 57999999999998874
No 5
>d1jkna_ d.113.1.1 (A:) Diadenosine tetraphosphate hydrolase (Ap4A hydrolase) {Narrow-leaved blue lupine (Lupinus angustifolius) [TaxId: 3871]}
Probab=28.21 E-value=26 Score=22.51 Aligned_cols=28 Identities=18% Similarity=0.360 Sum_probs=20.7
Q ss_pred ccc-EEEEEEEEeCCeEEEEEEEecCCCc
Q 032361 104 GTR-STSSLYVKSNGEVYFYERHLEKDLW 131 (142)
Q Consensus 104 GTR-s~TvilVd~~g~v~f~Er~~~~~~w 131 (142)
|-| +-.+|+++.+|++-+..|.-..+.|
T Consensus 12 ~yR~~Vg~vI~n~~~~vLL~kR~~~~g~W 40 (165)
T d1jkna_ 12 GYRRNVGICLMNNDKKIFAASRLDIPDAW 40 (165)
T ss_dssp SEEEEEEEEEECTTSCEEEEEESSSTTCE
T ss_pred CccccEEEEEEeCCCEEEEEEEcCCCCcc
Confidence 446 5588889999999999986433445
No 6
>d1zzoa1 c.47.1.10 (A:45-178) Lipoprotein DsbF {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=26.86 E-value=14 Score=22.69 Aligned_cols=21 Identities=19% Similarity=0.441 Sum_probs=14.6
Q ss_pred cccccEE-EEEEEEeCCeEEEE
Q 032361 102 RYGTRST-SSLYVKSNGEVYFY 122 (142)
Q Consensus 102 ~YGTRs~-TvilVd~~g~v~f~ 122 (142)
.||-+.- |.++||++|++.++
T Consensus 96 ~~~v~~~P~~~iiD~~G~i~~~ 117 (134)
T d1zzoa1 96 NFGVTQQPAYAFVDPHGNVDVV 117 (134)
T ss_dssp HTTCCSSSEEEEECTTCCEEEE
T ss_pred hcCCCccCeEEEECCCCeEEEE
Confidence 3554432 67889999998764
No 7
>d2b5xa1 c.47.1.10 (A:1-143) thiol:disulfide oxidoreductase YkuV {Bacillus subtilis [TaxId: 1423]}
Probab=24.70 E-value=19 Score=22.40 Aligned_cols=23 Identities=4% Similarity=0.213 Sum_probs=17.0
Q ss_pred ccc-ccEEEEEEEEeCCeEEEEEE
Q 032361 102 RYG-TRSTSSLYVKSNGEVYFYER 124 (142)
Q Consensus 102 ~YG-TRs~TvilVd~~g~v~f~Er 124 (142)
.|| +..-|+++||++|++.+...
T Consensus 105 ~~~v~~~P~~~~id~~G~i~~~~~ 128 (143)
T d2b5xa1 105 AFENEYVPAYYVFDKTGQLRHFQA 128 (143)
T ss_dssp HTCCCCSSEEEEECTTCBEEEEEE
T ss_pred HcCCCcCCEEEEECCCCEEEEEEE
Confidence 354 33468999999999988754
No 8
>d1mzua_ d.110.3.1 (A:) PYP domain of sensor histidine kinase Ppr {Rhodospirillum centenum [TaxId: 34018]}
Probab=24.70 E-value=21 Score=21.29 Aligned_cols=18 Identities=22% Similarity=0.381 Sum_probs=14.1
Q ss_pred EEEEEEeCCeEEEEEEEe
Q 032361 109 SSLYVKSNGEVYFYERHL 126 (142)
Q Consensus 109 TvilVd~~g~v~f~Er~~ 126 (142)
-||++|.+|+++++=+.+
T Consensus 15 gvi~~D~~G~I~~~N~aa 32 (110)
T d1mzua_ 15 GAIQVDGSGVIHRYNRTE 32 (110)
T ss_dssp EEEEEETTCBEEEECHHH
T ss_pred EEEEEcCCCCEEEeHHHH
Confidence 489999999998875433
No 9
>d1zofa1 c.47.1.10 (A:1-170) Thioredoxin reductase TsaA {Helicobacter pylori [TaxId: 210]}
Probab=24.38 E-value=35 Score=22.16 Aligned_cols=18 Identities=11% Similarity=0.028 Sum_probs=15.1
Q ss_pred EEEEEEEEeCCeEEEEEE
Q 032361 107 STSSLYVKSNGEVYFYER 124 (142)
Q Consensus 107 s~TvilVd~~g~v~f~Er 124 (142)
..+..+||++|++.+.+.
T Consensus 123 ~r~tfvID~~G~I~~~~~ 140 (170)
T d1zofa1 123 LRGAFLIDKNMKVRHAVI 140 (170)
T ss_dssp CEEEEEEETTTEEEEEEE
T ss_pred eEEEEEEcCCCeEEEEEE
Confidence 456899999999998875
No 10
>d2bmxa1 c.47.1.10 (A:2-170) Alkyl hydroperoxide reductase AhpC {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=24.03 E-value=30 Score=22.17 Aligned_cols=21 Identities=24% Similarity=0.392 Sum_probs=16.4
Q ss_pred ccccEEEEEEEEeCCeEEEEEEE
Q 032361 103 YGTRSTSSLYVKSNGEVYFYERH 125 (142)
Q Consensus 103 YGTRs~TvilVd~~g~v~f~Er~ 125 (142)
+..| +.++||.+|++.+++..
T Consensus 129 ~~~r--~~fvID~~G~I~~~~~~ 149 (169)
T d2bmxa1 129 VADR--VTFIVDPNNEIQFVSAT 149 (169)
T ss_dssp SBCE--EEEEECTTSBEEEEEEE
T ss_pred ccce--eEEEEcCCCEEEEEEEc
Confidence 3444 56889999999999873
No 11
>d1xvwa1 c.47.1.10 (A:1-153) Putative peroxiredoxin Rv2238c/MT2298 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=23.68 E-value=22 Score=22.31 Aligned_cols=20 Identities=25% Similarity=0.406 Sum_probs=15.0
Q ss_pred ccccEEEEEEEEeCCeEEEEEE
Q 032361 103 YGTRSTSSLYVKSNGEVYFYER 124 (142)
Q Consensus 103 YGTRs~TvilVd~~g~v~f~Er 124 (142)
+..| ++++||++|++.+...
T Consensus 113 ~~~r--~tfvID~~G~I~~~~~ 132 (153)
T d1xvwa1 113 IANR--GTFVVDRSGIIRFAEM 132 (153)
T ss_dssp EECS--EEEEECTTSBEEEEEE
T ss_pred ceee--eEEEECCCCEEEEEEE
Confidence 3445 4678999999998765
No 12
>d1g94a1 b.71.1.1 (A:355-448) Bacterial alpha-Amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]}
Probab=23.62 E-value=14 Score=22.68 Aligned_cols=18 Identities=17% Similarity=0.388 Sum_probs=13.0
Q ss_pred cccEE-EEEEEEeCCeEEE
Q 032361 104 GTRST-SSLYVKSNGEVYF 121 (142)
Q Consensus 104 GTRs~-TvilVd~~g~v~f 121 (142)
|..|+ ..|.|+.+|++++
T Consensus 59 ~~~CtG~~V~V~~~G~a~i 77 (94)
T d1g94a1 59 AKSCSGEVITVNSDGTINL 77 (94)
T ss_dssp SSCBSSCEEEECTTSEEEC
T ss_pred CCccccCEEEECCCcEEEE
Confidence 33455 7999999998653
No 13
>d2fy6a1 c.47.1.10 (A:33-175) Peptide methionine sulfoxide reductase MsrA/MsrB, N-terminal domain {Neisseria meningitidis serogroup A [TaxId: 65699]}
Probab=23.31 E-value=20 Score=22.15 Aligned_cols=18 Identities=17% Similarity=0.152 Sum_probs=13.9
Q ss_pred EEEEEEEEeCCeEEEEEE
Q 032361 107 STSSLYVKSNGEVYFYER 124 (142)
Q Consensus 107 s~TvilVd~~g~v~f~Er 124 (142)
.=|+++||++|++...-.
T Consensus 107 ~P~~~liD~~G~i~~~~~ 124 (143)
T d2fy6a1 107 YPSWALIGKDGDVQRIVK 124 (143)
T ss_dssp SSEEEEECTTSCEEEEEE
T ss_pred cCEEEEECCCCEEEEEEE
Confidence 347899999999876643
No 14
>d1e2ya_ c.47.1.10 (A:) Tryparedoxin peroxidase (thioredoxin peroxidase homologue) {Crithidia fasciculata [TaxId: 5656]}
Probab=23.10 E-value=29 Score=22.20 Aligned_cols=23 Identities=13% Similarity=0.163 Sum_probs=17.2
Q ss_pred ccccEEEEEEEEeCCeEEEEEEE
Q 032361 103 YGTRSTSSLYVKSNGEVYFYERH 125 (142)
Q Consensus 103 YGTRs~TvilVd~~g~v~f~Er~ 125 (142)
.|....++.+||++|++.++...
T Consensus 120 ~g~~~r~tfvID~~G~Ir~~~~~ 142 (167)
T d1e2ya_ 120 SGVAYRGVFIIDPNGKLRQIIIN 142 (167)
T ss_dssp TTEECEEEEEECTTSBEEEEEEE
T ss_pred CCCceeEEEEECCCCEEEEEEEc
Confidence 45445577899999999888653
No 15
>d2fkba1 d.113.1.2 (A:8-168) Hypothetical protein YfcD {Escherichia coli [TaxId: 562]}
Probab=21.97 E-value=38 Score=21.54 Aligned_cols=24 Identities=17% Similarity=0.169 Sum_probs=20.2
Q ss_pred ccccEEEEEEEEeCCeEEEEEEEe
Q 032361 103 YGTRSTSSLYVKSNGEVYFYERHL 126 (142)
Q Consensus 103 YGTRs~TvilVd~~g~v~f~Er~~ 126 (142)
...|+..||++|.+|++-+..|+.
T Consensus 28 ~~h~~v~v~v~~~~g~vLl~rR~~ 51 (161)
T d2fkba1 28 LRHRATYIVVHDGMGKILVQRRTE 51 (161)
T ss_dssp CCEEEEEEEEECSSSCEEEEEECS
T ss_pred CcEeEEEEEEEeCCCCEEEEEecC
Confidence 345899999999999998888865
No 16
>d1lu4a_ c.47.1.10 (A:) Soluble secreted antigen MPT53 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=20.72 E-value=24 Score=21.67 Aligned_cols=17 Identities=12% Similarity=0.411 Sum_probs=13.8
Q ss_pred EEEEEEEeCCeEEEEEE
Q 032361 108 TSSLYVKSNGEVYFYER 124 (142)
Q Consensus 108 ~TvilVd~~g~v~f~Er 124 (142)
-++++||++|++.++-+
T Consensus 101 P~~~lid~~G~i~~v~~ 117 (134)
T d1lu4a_ 101 PAFVFYRADGTSTFVNN 117 (134)
T ss_dssp SEEEEECTTSCEEEECC
T ss_pred CEEEEEeCCCeEEEEec
Confidence 37899999999987644
No 17
>d1wp0a1 c.47.1.10 (A:138-297) Thioredoxin-like protein Sco1 (YpmQ), soluble domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.31 E-value=18 Score=22.37 Aligned_cols=15 Identities=13% Similarity=0.295 Sum_probs=12.4
Q ss_pred cEEEEEEEEeCCeEE
Q 032361 106 RSTSSLYVKSNGEVY 120 (142)
Q Consensus 106 Rs~TvilVd~~g~v~ 120 (142)
-+.++.|||++|++.
T Consensus 123 H~~~~~LId~~G~i~ 137 (160)
T d1wp0a1 123 HTIIMYLIGPDGEFL 137 (160)
T ss_dssp ECCEEEEECTTSCEE
T ss_pred ccceEEEECCCCcEE
Confidence 456789999999875
No 18
>d1v9ya_ d.110.3.2 (A:) Direct oxygen sensor protein, DOS {Escherichia coli [TaxId: 562]}
Probab=20.26 E-value=25 Score=19.93 Aligned_cols=18 Identities=22% Similarity=0.523 Sum_probs=14.5
Q ss_pred EEEEEEeCCeEEEEEEEe
Q 032361 109 SSLYVKSNGEVYFYERHL 126 (142)
Q Consensus 109 TvilVd~~g~v~f~Er~~ 126 (142)
.|+++|.+|++.++=+.+
T Consensus 13 ~i~~~d~~g~i~~~N~~~ 30 (113)
T d1v9ya_ 13 GAVLINENDEVMFFNPAA 30 (113)
T ss_dssp EEEEECTTSBEEEECHHH
T ss_pred cEEEEeCCCCEEEEchhH
Confidence 588999999998876544
No 19
>d1z5ye1 c.47.1.10 (E:49-184) Thioredoxin-like protein CcmG (CycY, DsbE) {Escherichia coli [TaxId: 562]}
Probab=20.18 E-value=25 Score=21.55 Aligned_cols=16 Identities=13% Similarity=0.414 Sum_probs=13.1
Q ss_pred EEEEEEeCCeEEEEEE
Q 032361 109 SSLYVKSNGEVYFYER 124 (142)
Q Consensus 109 TvilVd~~g~v~f~Er 124 (142)
|.++||++|++.+.-.
T Consensus 97 ~~~liD~~G~i~~~~~ 112 (136)
T d1z5ye1 97 ETFLIDGNGIIRYRHA 112 (136)
T ss_dssp EEEEECTTSCEEEEEE
T ss_pred eEEEEcCCCEEEEEEE
Confidence 6889999999987643
Done!