BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032364
(142 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225429185|ref|XP_002275810.1| PREDICTED: uncharacterized protein LOC100266884 [Vitis vinifera]
gi|297736400|emb|CBI25123.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 159 bits (401), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 88/141 (62%), Positives = 101/141 (71%), Gaps = 8/141 (5%)
Query: 3 VASLQIGKPSLLSSVSISQSNFPGK-------LDSGKVFLRSRCLIRRKFKVCCGVQEGD 55
+ASLQI K S + ISQS K DS K S RR+ +VCCGVQEGD
Sbjct: 1 MASLQILKSSTFPPLPISQSKISRKSTCLFSEFDSRKRIRNSAFFTRRRLRVCCGVQEGD 60
Query: 56 KQSNGEEPPESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTKLKEEDIGFSRRNTVSTE 115
QSNGEEPPESLFMKELKRRGMTPTSLLEDS R GL+++ KL EEDIGFS+RN ST+
Sbjct: 61 NQSNGEEPPESLFMKELKRRGMTPTSLLEDSKRGAYGLEEEIKL-EEDIGFSKRNAYSTD 119
Query: 116 IDKSLADQRERSMALNSEGLE 136
+ +L++QRERSMALNSEGLE
Sbjct: 120 FEANLSNQRERSMALNSEGLE 140
>gi|255562188|ref|XP_002522102.1| conserved hypothetical protein [Ricinus communis]
gi|223538701|gb|EEF40302.1| conserved hypothetical protein [Ricinus communis]
Length = 216
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/141 (58%), Positives = 102/141 (72%), Gaps = 8/141 (5%)
Query: 3 VASLQIGKPSLLSSVSISQSNFPGKLDSGKVFLR------SRCLIRRKFKVCCGVQEGDK 56
+A+L + K S LS +SI Q NFPG + + L+ R + ++KF VCC VQEGD
Sbjct: 1 MAALYVLK-STLSPISIQQKNFPGNSNPRRTILKLENFTSRRYIQKQKFSVCCSVQEGDN 59
Query: 57 QSNGEEPPESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTKL-KEEDIGFSRRNTVSTE 115
Q+N EE PESLFMKELKRRGMTPTSLLEDS++ GL+D+ K+ +EED GF +R VSTE
Sbjct: 60 QNNAEEAPESLFMKELKRRGMTPTSLLEDSNKGSYGLEDEFKIGQEEDRGFFKRKVVSTE 119
Query: 116 IDKSLADQRERSMALNSEGLE 136
DKSL +QRE SMALNSEGLE
Sbjct: 120 FDKSLTNQRETSMALNSEGLE 140
>gi|351727323|ref|NP_001236133.1| uncharacterized protein LOC100305745 [Glycine max]
gi|255626505|gb|ACU13597.1| unknown [Glycine max]
Length = 217
Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 71/137 (51%), Positives = 91/137 (66%), Gaps = 17/137 (12%)
Query: 14 LSSVSISQSNFPGKLDSGKVFLRSRCLIRRK--------------FKVCCGVQEGDKQSN 59
LS +S+SQSNF K C + ++ F+VCC QE + ++N
Sbjct: 8 LSQLSLSQSNFLRKSTWNN---HLPCYLHKRIAKLQTFTTSKSSTFRVCCSSQETNNKNN 64
Query: 60 GEEPPESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTKLKEEDIGFSRRNTVSTEIDKS 119
GEEPPESLFMKELKRRGMTPTSLL+D ++D GLD++ + EED GF +R VST +++S
Sbjct: 65 GEEPPESLFMKELKRRGMTPTSLLDDYKQSDYGLDEEVYVNEEDRGFPKRKAVSTNVERS 124
Query: 120 LADQRERSMALNSEGLE 136
L +QRERSMALNSEGLE
Sbjct: 125 LDNQRERSMALNSEGLE 141
>gi|388522639|gb|AFK49381.1| unknown [Medicago truncatula]
Length = 214
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/134 (56%), Positives = 93/134 (69%), Gaps = 14/134 (10%)
Query: 14 LSSVSISQSNFP--GKLD--SGKVFLRSRCLIRRKF------KVCCGV-QEGDKQSNGEE 62
LS +S+SQSNFP L+ + + F R L KF +VCC Q+ Q+NGEE
Sbjct: 8 LSQLSLSQSNFPRNSSLNHPTQQCFFHKRIL---KFQNSKSSRVCCSSSQDAKNQNNGEE 64
Query: 63 PPESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTKLKEEDIGFSRRNTVSTEIDKSLAD 122
PPESLF+KELKRRGMTPTSLLED +T+ G+D++ + EED GF R TVST ID+ L +
Sbjct: 65 PPESLFLKELKRRGMTPTSLLEDYKQTNCGVDEEAFVNEEDRGFLNRKTVSTNIDRGLEN 124
Query: 123 QRERSMALNSEGLE 136
QRERSMALNSEGLE
Sbjct: 125 QRERSMALNSEGLE 138
>gi|356536075|ref|XP_003536566.1| PREDICTED: uncharacterized protein LOC100797764 [Glycine max]
Length = 217
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 72/137 (52%), Positives = 90/137 (65%), Gaps = 17/137 (12%)
Query: 14 LSSVSISQSNFPGKLDSGKVFLRSRCLIRRK--------------FKVCCGVQEGDKQSN 59
LS +S+SQSNF K C I ++ F+V C E +KQ+N
Sbjct: 8 LSQLSLSQSNFLRKSTWNN---HLPCYIHKRIAKLQTFTSSKSSTFRVRCSSPETNKQNN 64
Query: 60 GEEPPESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTKLKEEDIGFSRRNTVSTEIDKS 119
GEEPPESLFMKELKRRGMTPTSLL+D ++D GLD++ + EED GF +R VST +++S
Sbjct: 65 GEEPPESLFMKELKRRGMTPTSLLDDYKQSDYGLDEEVYVNEEDRGFPKRKAVSTNVERS 124
Query: 120 LADQRERSMALNSEGLE 136
L +QRERSMALNSEGLE
Sbjct: 125 LDNQRERSMALNSEGLE 141
>gi|224105771|ref|XP_002313927.1| predicted protein [Populus trichocarpa]
gi|222850335|gb|EEE87882.1| predicted protein [Populus trichocarpa]
Length = 226
Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 82/151 (54%), Positives = 104/151 (68%), Gaps = 18/151 (11%)
Query: 3 VASLQIGKPSLLSSVSISQS-NFPGKLDSGKVFLRSRCLI---------RRKFKVCCGVQ 52
+ASL I K S LS++S S S +F GK + K + R ++K KV C VQ
Sbjct: 1 MASLHILK-STLSTLSTSPSKDFIGKSNYRKTIPKLRTFYGSSRRYSGRQQKVKVFCSVQ 59
Query: 53 EGDK-QSNG------EEPPESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTKLKEEDIG 105
E D Q NG EEP ESLFMKELKRRGMTPTSLLE+++R + G++D+ K+ EED G
Sbjct: 60 EEDNNQRNGKFSYQREEPTESLFMKELKRRGMTPTSLLEETNRGNYGVEDEMKIGEEDRG 119
Query: 106 FSRRNTVSTEIDKSLADQRERSMALNSEGLE 136
FS+RN VSTE+DKSL++QRE+SMALNSEG+E
Sbjct: 120 FSKRNPVSTELDKSLSNQREKSMALNSEGIE 150
>gi|224060907|ref|XP_002300286.1| predicted protein [Populus trichocarpa]
gi|222847544|gb|EEE85091.1| predicted protein [Populus trichocarpa]
Length = 152
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/77 (76%), Positives = 71/77 (92%)
Query: 60 GEEPPESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTKLKEEDIGFSRRNTVSTEIDKS 119
GEEPPESLFMKELKRRGMTPTSLLE+++R + G++D+ K+ EED GFS+RN+VSTEID+
Sbjct: 1 GEEPPESLFMKELKRRGMTPTSLLEETNRGNYGVEDEMKIGEEDWGFSKRNSVSTEIDRG 60
Query: 120 LADQRERSMALNSEGLE 136
L+DQRERSMALNSEGLE
Sbjct: 61 LSDQRERSMALNSEGLE 77
>gi|449465109|ref|XP_004150271.1| PREDICTED: uncharacterized protein LOC101221726 [Cucumis sativus]
gi|449484408|ref|XP_004156874.1| PREDICTED: uncharacterized LOC101221726 [Cucumis sativus]
Length = 217
Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/145 (52%), Positives = 99/145 (68%), Gaps = 14/145 (9%)
Query: 3 VASLQIGKPSLLSSVSISQSNFPGK-------LDSGKVFLRSRCL----IRRKFKVCCGV 51
+A+LQI K SL S SIS SNF + DS + R R L + R+F C
Sbjct: 1 MAALQILKSSL-SLPSISHSNFGSQSTRFVSDFDSLLLHGRRRSLRYACVYRRFTFRCAA 59
Query: 52 QEGDKQSNGEEPPESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTKLKEEDIGFSRRNT 111
++ DK++NGEEPPESLFMKELK+RG+TPTSLLED++ +D L ++ E+ FSRR+
Sbjct: 60 KDTDKETNGEEPPESLFMKELKKRGITPTSLLEDTNSSDFELGG--EMTGENRDFSRRSA 117
Query: 112 VSTEIDKSLADQRERSMALNSEGLE 136
VSTE++KSL++QRERSM LNSEGLE
Sbjct: 118 VSTEVNKSLSNQRERSMQLNSEGLE 142
>gi|388519125|gb|AFK47624.1| unknown [Lotus japonicus]
Length = 215
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/132 (50%), Positives = 85/132 (64%), Gaps = 9/132 (6%)
Query: 14 LSSVSISQSNF---PGK-LDSGKVFLRSRC-----LIRRKFKVCCGVQEGDKQSNGEEPP 64
LS +S+S+SNF P + + FL R KF V C Q Q+NG+E P
Sbjct: 8 LSQLSLSKSNFSRHPTRNISPPDCFLVRRIGKFQTFTASKFMVSCTSQNSQNQNNGDEAP 67
Query: 65 ESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTKLKEEDIGFSRRNTVSTEIDKSLADQR 124
ESLFMKELKRRGM PTSLLED ++ + LD++ + EED G +R+ VST I++ L +QR
Sbjct: 68 ESLFMKELKRRGMNPTSLLEDYKQSSNVLDEEVYVNEEDRGSPKRSAVSTNIERGLENQR 127
Query: 125 ERSMALNSEGLE 136
ERSMALNSEGLE
Sbjct: 128 ERSMALNSEGLE 139
>gi|312282351|dbj|BAJ34041.1| unnamed protein product [Thellungiella halophila]
Length = 212
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/142 (51%), Positives = 90/142 (63%), Gaps = 12/142 (8%)
Query: 1 MAVASLQIGKPSLLSSVSISQSNFPGKLDSGKVFLR---SRCLIR--RKFKVCCGVQEGD 55
MA +SL+I K S VSIS+ P KL+ K R SR R R +VC ++GD
Sbjct: 1 MASSSLEIVK-LCGSPVSISRHQSPVKLEPRKRVFRLADSRNWHRLGRCVRVCSSARDGD 59
Query: 56 KQSNGEEPPESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTKLKEEDIGFSRRNTVSTE 115
QS G+EPPESLFMKELKRRGMTPTSLL+D + +D+ KE G S + T +T
Sbjct: 60 NQSKGDEPPESLFMKELKRRGMTPTSLLQD---YEVDVDEVKTGKE--TGNSTKTTATTP 114
Query: 116 -IDKSLADQRERSMALNSEGLE 136
D+SL +QRERS+ALNSEGLE
Sbjct: 115 AFDQSLLNQRERSLALNSEGLE 136
>gi|297852692|ref|XP_002894227.1| hypothetical protein ARALYDRAFT_474138 [Arabidopsis lyrata subsp.
lyrata]
gi|297340069|gb|EFH70486.1| hypothetical protein ARALYDRAFT_474138 [Arabidopsis lyrata subsp.
lyrata]
Length = 212
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/141 (50%), Positives = 82/141 (58%), Gaps = 10/141 (7%)
Query: 1 MAVASLQIGKPSLLSSVSISQSNFPGKLDSGKVFLR---SRCLIRRK--FKVCCGVQEGD 55
MA +SL+I K S VSI + P KL+ K LR SR R +V GD
Sbjct: 1 MASSSLEIVK-LCGSPVSIPRHKSPIKLECRKRVLRLSDSRTWHRLGTCVRVYSSALNGD 59
Query: 56 KQSNGEEPPESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTKLKEEDIGFSRRNTVSTE 115
QS GEEPPESLFMKELKRRGMTPTSLL+D D+ K +E S+ S
Sbjct: 60 NQSKGEEPPESLFMKELKRRGMTPTSLLQDYEVD----QDEIKTDKETGNSSKTTATSPA 115
Query: 116 IDKSLADQRERSMALNSEGLE 136
DKSL +QRERS+ALNSEGLE
Sbjct: 116 FDKSLLNQRERSLALNSEGLE 136
>gi|302142132|emb|CBI19335.3| unnamed protein product [Vitis vinifera]
Length = 264
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 71/107 (66%), Gaps = 14/107 (13%)
Query: 31 GKVF-LRSRCLIRRKFKVCCGVQEGDKQSNGEEPPESLFMKELKRRGMTPTSLLEDSSRT 89
G+V LR R + F+V CGV+EG + NGEE PESLF+KE+KRRGM +SL S
Sbjct: 102 GRVLRLRDRQCLTGGFRVRCGVEEGKSERNGEEAPESLFVKEMKRRGMKTSSLPSGS--- 158
Query: 90 DSGLDDKTKLKEEDIGFSRRNTVSTEIDKSLADQRERSMALNSEGLE 136
+EED G S+ N VSTEI+ SL++QRERSMALNSEG+E
Sbjct: 159 ----------EEEDSGISKTNLVSTEIENSLSNQRERSMALNSEGIE 195
>gi|225458960|ref|XP_002285552.1| PREDICTED: uncharacterized protein LOC100262687 [Vitis vinifera]
Length = 195
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 71/107 (66%), Gaps = 14/107 (13%)
Query: 31 GKVF-LRSRCLIRRKFKVCCGVQEGDKQSNGEEPPESLFMKELKRRGMTPTSLLEDSSRT 89
G+V LR R + F+V CGV+EG + NGEE PESLF+KE+KRRGM +SL S
Sbjct: 33 GRVLRLRDRQCLTGGFRVRCGVEEGKSERNGEEAPESLFVKEMKRRGMKTSSLPSGS--- 89
Query: 90 DSGLDDKTKLKEEDIGFSRRNTVSTEIDKSLADQRERSMALNSEGLE 136
+EED G S+ N VSTEI+ SL++QRERSMALNSEG+E
Sbjct: 90 ----------EEEDSGISKTNLVSTEIENSLSNQRERSMALNSEGIE 126
>gi|147834803|emb|CAN61776.1| hypothetical protein VITISV_024980 [Vitis vinifera]
Length = 260
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 71/107 (66%), Gaps = 14/107 (13%)
Query: 31 GKVF-LRSRCLIRRKFKVCCGVQEGDKQSNGEEPPESLFMKELKRRGMTPTSLLEDSSRT 89
G+V LR R + F+V CGV+EG + NGEE PESLF+KE+KRRGM +SL S
Sbjct: 98 GRVLRLRDRQCLTGGFRVRCGVEEGKSERNGEEAPESLFVKEMKRRGMKTSSLPSGS--- 154
Query: 90 DSGLDDKTKLKEEDIGFSRRNTVSTEIDKSLADQRERSMALNSEGLE 136
+EED G S+ N VSTEI+ SL++QRERSMALNSEG+E
Sbjct: 155 ----------EEEDSGISKTNLVSTEIENSLSNQRERSMALNSEGIE 191
>gi|21553619|gb|AAM62712.1| tubulin alpha-6 chain, putative [Arabidopsis thaliana]
Length = 209
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/139 (48%), Positives = 80/139 (57%), Gaps = 9/139 (6%)
Query: 1 MAVASLQIGKPSLLSSVSISQSNFPGKLDSGKVFLR---SRCLIRRKFKVCCGVQEGDKQ 57
MA +SL+I K S VS + P KL+ K R SR R + + GD Q
Sbjct: 1 MASSSLEIVK-LCGSPVSFPRHKSPIKLECRKRVFRLPNSRSWHRLRVS-SSALNGGDNQ 58
Query: 58 SNGEEPPESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTKLKEEDIGFSRRNTVSTEID 117
S GEEPPESLFMKELKRRGMTPTSLL+D D+ K +E S+ + D
Sbjct: 59 SKGEEPPESLFMKELKRRGMTPTSLLQDYEVE----QDEIKTGKETGNSSKTTATTPAFD 114
Query: 118 KSLADQRERSMALNSEGLE 136
KSL +QRERS+ALNSEGLE
Sbjct: 115 KSLLNQRERSLALNSEGLE 133
>gi|15222858|ref|NP_175424.1| uncharacterized protein [Arabidopsis thaliana]
gi|8569098|gb|AAF76443.1|AC015445_10 ESTs gb|F20048, gb|F20049 come from this gene [Arabidopsis
thaliana]
gi|12248027|gb|AAG50105.1|AF334727_1 putative tubulin alpha-6 chain [Arabidopsis thaliana]
gi|13430518|gb|AAK25881.1|AF360171_1 putative tubulin alpha-6 chain [Arabidopsis thaliana]
gi|332194387|gb|AEE32508.1| uncharacterized protein [Arabidopsis thaliana]
Length = 209
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/139 (48%), Positives = 80/139 (57%), Gaps = 9/139 (6%)
Query: 1 MAVASLQIGKPSLLSSVSISQSNFPGKLDSGKVFLR---SRCLIRRKFKVCCGVQEGDKQ 57
MA +SL+I K S VS + P KL+ K R SR R + + GD Q
Sbjct: 1 MASSSLEIVK-LCGSPVSFPRHKSPIKLECRKRVFRLPNSRSWHRLRVS-SSALNGGDNQ 58
Query: 58 SNGEEPPESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTKLKEEDIGFSRRNTVSTEID 117
S GEEPPESLFMKELKRRGMTPTSLL+D D+ K +E S+ + D
Sbjct: 59 SKGEEPPESLFMKELKRRGMTPTSLLQDYEVD----QDEIKTGKETGNSSKTTATTPAFD 114
Query: 118 KSLADQRERSMALNSEGLE 136
KSL +QRERS+ALNSEGLE
Sbjct: 115 KSLLNQRERSLALNSEGLE 133
>gi|116792314|gb|ABK26315.1| unknown [Picea sitchensis]
Length = 248
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 42 RRKFKVCCGVQEGDKQSNGEEPPESLFMKELKRRGMTPTSLLEDSSRTDSGL-DDKTKLK 100
R + V C + D +GEEPPE+LFMKELKRRGMTP SL E++ ++ GL +TK +
Sbjct: 68 RGRLSVNCQRTDRDGDPSGEEPPETLFMKELKRRGMTPASLFEENDKSPYGLGSTETKTR 127
Query: 101 EE-DIGFSRRNT--VSTEI-DKSLADQRERSMALNSEGLE 136
EE + GF+ RN + T I D++ DQR RSMALNSEGLE
Sbjct: 128 EEGNEGFTNRNDRRIFTGIDDRNQVDQRARSMALNSEGLE 167
>gi|307135958|gb|ADN33818.1| tubulin alpha chain [Cucumis melo subsp. melo]
Length = 141
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/68 (63%), Positives = 55/68 (80%), Gaps = 2/68 (2%)
Query: 69 MKELKRRGMTPTSLLEDSSRTDSGLDDKTKLKEEDIGFSRRNTVSTEIDKSLADQRERSM 128
MKELK+RG+TPTSLLED++ +D GL + + D FSRR+ VSTE++KSL++QRERSM
Sbjct: 1 MKELKKRGITPTSLLEDTNNSDFGLGGEMTGENRD--FSRRSAVSTEVNKSLSNQRERSM 58
Query: 129 ALNSEGLE 136
LNSEGLE
Sbjct: 59 QLNSEGLE 66
>gi|195610832|gb|ACG27246.1| tubulin alpha-6 chain [Zea mays]
Length = 179
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 49/100 (49%), Gaps = 31/100 (31%)
Query: 42 RRKFKVCC--GVQEGDKQSNGE-EPPESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTK 98
R + +V C G G K+ GE E PESLF +EL+RRGM P
Sbjct: 30 RLRLRVRCRAGGDGGMKKEEGEAEAPESLFARELRRRGMAPG------------------ 71
Query: 99 LKEEDIGFSRRNTVSTEIDKSLA--DQRERSMALNSEGLE 136
++R +TE ++ A QRERSMALNSEGLE
Sbjct: 72 --------AKRGVAATEFERGAAADGQRERSMALNSEGLE 103
>gi|226493796|ref|NP_001147401.1| tubulin alpha-6 chain [Zea mays]
gi|195611052|gb|ACG27356.1| tubulin alpha-6 chain [Zea mays]
gi|413925595|gb|AFW65527.1| tubulin alpha-6 chain [Zea mays]
Length = 198
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 53/102 (51%), Gaps = 16/102 (15%)
Query: 42 RRKFKVCC--GVQEGDKQSNGE-EPPESLFMKELKRRGM--TPTSLLEDSSRTDSGLDDK 96
R + +V C G G K+ GE E PESLF +EL+RRGM + S + G +
Sbjct: 30 RLRLRVRCRAGGDGGMKKEEGEAEAPESLFARELRRRGMAPGAAAPAGASKEAEEGAPEA 89
Query: 97 TKLKEEDIGFSRRNTVSTEIDKSLA--DQRERSMALNSEGLE 136
++R +TE ++ A QRERSMALNSEGLE
Sbjct: 90 G---------AKRGVAATEFERGAAADGQRERSMALNSEGLE 122
>gi|357156478|ref|XP_003577470.1| PREDICTED: uncharacterized protein LOC100843098 [Brachypodium
distachyon]
Length = 202
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 65/140 (46%), Gaps = 18/140 (12%)
Query: 1 MAVASLQIGKPSLLSSVSISQSNFPGKLDSGKVFLRSRCLIRRKFKVCCGVQEGDKQSNG 60
MA+A + + +P+L SS S ++ +L LR RC + G E D+ S
Sbjct: 1 MAMAVMHLARPALTSSPSSTR-----QLRRRATCLRVRCRV--------GGDE-DRGSEE 46
Query: 61 EEPPESLFMKELKRRGMTPTSLLEDSSRTDSG----LDDKTKLKEEDIGFSRRNTVSTEI 116
+ PESLF KEL+RRGM P S + ++ + + G +
Sbjct: 47 DAAPESLFAKELRRRGMAPGSAPPPAEKSGASAEAEEGGRGGEAGRKRGVAAAAAEFGRA 106
Query: 117 DKSLADQRERSMALNSEGLE 136
+ QRERSMALNSEGLE
Sbjct: 107 AAGMDGQRERSMALNSEGLE 126
>gi|168059850|ref|XP_001781913.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666629|gb|EDQ53278.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 163
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 55/105 (52%), Gaps = 11/105 (10%)
Query: 35 LRSRCLIRRKFKVCCGVQEG--DKQSNGEEPPESLFMKELKRRGMTPTSLLEDSSRTDSG 92
RSR R EG DK + EE PE+LFM+EL +R L +D ++
Sbjct: 1 FRSRNSTSRHHLRMVVRWEGGQDKDPSSEERPETLFMRELAKR----KKLGQDVGMKET- 55
Query: 93 LDDKTKLKEEDIGFSRRNTVSTEID-KSLADQRERSMALNSEGLE 136
TK KEE+ S+ ++ D + +DQR+RSMALNSEGL+
Sbjct: 56 ---DTKTKEEETEGSKAFSMPKSTDERDTSDQRKRSMALNSEGLD 97
>gi|302771173|ref|XP_002969005.1| hypothetical protein SELMODRAFT_440550 [Selaginella moellendorffii]
gi|300163510|gb|EFJ30121.1| hypothetical protein SELMODRAFT_440550 [Selaginella moellendorffii]
Length = 461
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 46/92 (50%), Gaps = 24/92 (26%)
Query: 62 EPPESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTKLKEEDIGFSRRNT---------- 111
EPPESLFMKELKRRG+ P + SG +TK K E+ G ++
Sbjct: 63 EPPESLFMKELKRRGLAPPT-------KYSGASTETKTKREEFGSGEDSSDTAQSFKSST 115
Query: 112 -------VSTEIDKSLADQRERSMALNSEGLE 136
S+E + Q +R++ALNSEGL+
Sbjct: 116 SSSSSSSNSSEWRDDRSGQLKRTLALNSEGLD 147
>gi|302817989|ref|XP_002990669.1| hypothetical protein SELMODRAFT_448117 [Selaginella moellendorffii]
gi|300141591|gb|EFJ08301.1| hypothetical protein SELMODRAFT_448117 [Selaginella moellendorffii]
Length = 428
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 46/92 (50%), Gaps = 24/92 (26%)
Query: 62 EPPESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTKLKEEDIG---------------- 105
EPPESLFMKELKRRG+ P + SG +TK K E+ G
Sbjct: 63 EPPESLFMKELKRRGLAPPT-------KYSGASTETKTKREEFGSGEDSGDTAQSFKSST 115
Query: 106 -FSRRNTVSTEIDKSLADQRERSMALNSEGLE 136
S + S+E + Q +R++ALNSEGL+
Sbjct: 116 SSSSSPSNSSEWRDDRSGQLKRTLALNSEGLD 147
>gi|326526203|dbj|BAJ93278.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 208
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 65/146 (44%), Gaps = 26/146 (17%)
Query: 1 MAVASLQIGKPSLLSSVSISQSNFPGKLDSGKVFLRSRCLIRRKFKVCC---GVQEGDKQ 57
M +A + + +P+L S+ R R ++R +V C G + G +
Sbjct: 3 MELAVIHLARPALTPPPSMRP--------------RGRRMLR--LRVRCRIDGDEGGGAR 46
Query: 58 SNGEEPPESLFMKELKRRGMTPTSLLED------SSRTDSGLDDKTKLKEEDIGFSRRNT 111
+ E+ PESLF KEL+RRGM S+L S + G + K +
Sbjct: 47 GSEEDAPESLFAKELRRRGMAAGSVLSGEKSGAASEAEEGGRGGEAGRKRVVGAAAAAAA 106
Query: 112 VSTEIDKSLAD-QRERSMALNSEGLE 136
E + AD QRERSM LNSEGLE
Sbjct: 107 AEFERAAAGADGQRERSMTLNSEGLE 132
>gi|256387098|gb|ACU80551.1| Dof3 protein [Jatropha curcas]
Length = 518
Score = 35.4 bits (80), Expect = 8.1, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Query: 52 QEGDKQSNGEEPPESLFMKELKRRGMTPTSLLEDSSRTDSGLDDKTKLKEEDIGFSRRNT 111
+E DK + GE P ES K+ TPT E+SS D+G+ D K + S T
Sbjct: 73 RESDKDAGGETPLES------KQENGTPTVTAEESSNPDAGISDNPKTSSVEKDNSTSQT 126
Query: 112 VSTEIDKS 119
TE ++S
Sbjct: 127 SKTEEEQS 134
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.312 0.129 0.350
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,993,294,913
Number of Sequences: 23463169
Number of extensions: 75416992
Number of successful extensions: 151100
Number of sequences better than 100.0: 40
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 151046
Number of HSP's gapped (non-prelim): 40
length of query: 142
length of database: 8,064,228,071
effective HSP length: 106
effective length of query: 36
effective length of database: 9,872,099,453
effective search space: 355395580308
effective search space used: 355395580308
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 71 (32.0 bits)