Your job contains 1 sequence.
>032369
MPVPLAPYPTPPAPYTPPANGAQSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPGT
EMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQVAHVNCGNCRMLLMYQYGARS
VKCAVCNFVTAVGVSNHIFFLV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 032369
(142 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q0J7V9 - symbol:LSD1 "Protein LSD1" species:399... 516 1.5e-49 1
UNIPROTKB|F8RP38 - symbol:F8RP38 "Zinc finger protein LSD... 387 7.2e-36 1
TAIR|locus:2128639 - symbol:LSD1 "LESION SIMULATING DISEA... 196 6.8e-30 2
TAIR|locus:2119622 - symbol:LOL2 "AT4G21610" species:3702... 256 5.5e-22 1
UNIPROTKB|Q704V3 - symbol:LOL5 "Protein LOL5" species:399... 238 4.4e-20 1
>UNIPROTKB|Q0J7V9 [details] [associations]
symbol:LSD1 "Protein LSD1" species:39947 "Oryza sativa
Japonica Group" [GO:0005634 "nucleus" evidence=TAS] [GO:0031348
"negative regulation of defense response" evidence=IMP] [GO:0034051
"negative regulation of plant-type hypersensitive response"
evidence=IMP] [GO:0045595 "regulation of cell differentiation"
evidence=IMP] GO:GO:0005634 GO:GO:0006915 GO:GO:0030154
GO:GO:0006917 GO:GO:0045595 GO:GO:0009626 EMBL:AP008214
EMBL:CM000145 GO:GO:0034051 InterPro:IPR005735 Pfam:PF06943
TIGRFAMs:TIGR01053 EMBL:AY525368 EMBL:AJ620676 EMBL:AK111759
RefSeq:NP_001061042.1 UniGene:Os.57682
EnsemblPlants:LOC_Os08g06280.2 GeneID:4344713
KEGG:dosa:Os08t0159500-01 KEGG:osa:4344713 Gramene:Q0J7V9
eggNOG:NOG285622 HOGENOM:HOG000264446 ProtClustDB:CLSN2688207
Uniprot:Q0J7V9
Length = 184
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 96/116 (82%), Positives = 99/116 (85%)
Query: 20 NGAQSQLVCSGCRNLLLYPVGATSXXXXXXXXXXXXXXXGTEMAQLVCGGCHTLLMYIRG 79
NGAQSQLVCSGCRNLL+YP GATS GTEMAQLVCGGCHTLLMYIRG
Sbjct: 60 NGAQSQLVCSGCRNLLMYPAGATSVCCAVCSTVTAVPAPGTEMAQLVCGGCHTLLMYIRG 119
Query: 80 ATSVQCSCCHTVNLALEANQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTAVGVS 135
ATSVQCSCCHTVNLA+EANQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVT+VG S
Sbjct: 120 ATSVQCSCCHTVNLAMEANQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTSVGAS 175
Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 35/77 (45%), Positives = 46/77 (59%)
Query: 63 AQLVCGGCHTLLMYIRGATSVQCSCCHTVN-LALEANQVAHVNCGNCRMLLMYQYGARSV 121
+QLVC GC LLMY GATSV C+ C TV + ++A + CG C LLMY GA SV
Sbjct: 64 SQLVCSGCRNLLMYPAGATSVCCAVCSTVTAVPAPGTEMAQLVCGGCHTLLMYIRGATSV 123
Query: 122 KCAVCNFVTAVGVSNHI 138
+C+ C+ V +N +
Sbjct: 124 QCSCCHTVNLAMEANQV 140
>UNIPROTKB|F8RP38 [details] [associations]
symbol:F8RP38 "Zinc finger protein LSD1" species:3888
"Pisum sativum" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IMP] [GO:0060548 "negative
regulation of cell death" evidence=IMP] GO:GO:0005634 GO:GO:0060548
InterPro:IPR005735 Pfam:PF06943 TIGRFAMs:TIGR01053 EMBL:HQ006097
IntAct:F8RP38 Uniprot:F8RP38
Length = 176
Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
Identities = 72/114 (63%), Positives = 84/114 (73%)
Query: 23 QSQLVCSGCRNLLLYPVGATSXXXXXXXXXXXXXXXGTEMAQLVCGGCHTLLMYIRGATS 82
QSQLVC+GCRN+LLYP GAT+ G +M+QL CGGC TLLMY RGATS
Sbjct: 2 QSQLVCNGCRNMLLYPRGATNVCCALCNTISPVPPPGMDMSQLYCGGCRTLLMYTRGATS 61
Query: 83 VQCSCCHTVNLALEANQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTAVGVSN 136
V+CSCCHTVNLA +NQVAHV C NCR LMY YGA SVKCAVC+++T + +SN
Sbjct: 62 VRCSCCHTVNLAPVSNQVAHVPCANCRTTLMYPYGAPSVKCAVCHYITNINMSN 115
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 34/77 (44%), Positives = 50/77 (64%)
Query: 63 AQLVCGGCHTLLMYIRGATSVQCSCCHTVN-LALEANQVAHVNCGNCRMLLMYQYGARSV 121
+QLVC GC +L+Y RGAT+V C+ C+T++ + ++ + CG CR LLMY GA SV
Sbjct: 3 SQLVCNGCRNMLLYPRGATNVCCALCNTISPVPPPGMDMSQLYCGGCRTLLMYTRGATSV 62
Query: 122 KCAVCNFVTAVGVSNHI 138
+C+ C+ V VSN +
Sbjct: 63 RCSCCHTVNLAPVSNQV 79
>TAIR|locus:2128639 [details] [associations]
symbol:LSD1 "LESION SIMULATING DISEASE" species:3702
"Arabidopsis thaliana" [GO:0005576 "extracellular region"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0009862 "systemic
acquired resistance, salicylic acid mediated signaling pathway"
evidence=IEP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0002240 "response to molecule of oomycetes origin"
evidence=IMP] [GO:0009626 "plant-type hypersensitive response"
evidence=IMP] [GO:0001666 "response to hypoxia" evidence=IMP]
[GO:0010310 "regulation of hydrogen peroxide metabolic process"
evidence=IMP] [GO:0010602 "regulation of
1-aminocyclopropane-1-carboxylate metabolic process" evidence=IMP]
[GO:0010618 "aerenchyma formation" evidence=IMP] [GO:0010104
"regulation of ethylene mediated signaling pathway" evidence=IMP]
[GO:0043067 "regulation of programmed cell death" evidence=IGI]
[GO:0043069 "negative regulation of programmed cell death"
evidence=IGI] [GO:0000303 "response to superoxide"
evidence=IMP;RCA] [GO:0006914 "autophagy" evidence=RCA] [GO:0008219
"cell death" evidence=IMP;RCA] [GO:0009651 "response to salt
stress" evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=RCA] [GO:0009743 "response to carbohydrate stimulus"
evidence=RCA] [GO:0009751 "response to salicylic acid stimulus"
evidence=RCA] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0009873 "ethylene mediated signaling
pathway" evidence=RCA] EMBL:CP002687 GO:GO:0001666 GO:GO:0003700
GO:GO:0043067 GO:GO:0009626 GO:GO:0009862 GO:GO:0010310
GO:GO:0000303 InterPro:IPR005735 Pfam:PF06943 TIGRFAMs:TIGR01053
GO:GO:0010104 IPI:IPI00938780 RefSeq:NP_001154257.1
UniGene:At.24187 PRIDE:F4JUW0 EnsemblPlants:AT4G20380.8
GeneID:827786 KEGG:ath:AT4G20380 OMA:CALCNTI GO:GO:0010618
GO:GO:0010602 GO:GO:0002240 Uniprot:F4JUW0
Length = 210
Score = 196 (74.1 bits), Expect = 6.8e-30, Sum P(2) = 6.8e-30
Identities = 38/78 (48%), Positives = 49/78 (62%)
Query: 23 QSQLVCSGCRNLLLYPVGATSXXXXXXXXXXXXXXXGT--EMAQLVCGGCHTLLMYIRGA 80
Q QLVC GCRNLL+YP GA++ +MA ++CGGC T+LMY RGA
Sbjct: 2 QDQLVCHGCRNLLMYPRGASNVRCALCNTINMVPPPPPPHDMAHIICGGCRTMLMYTRGA 61
Query: 81 TSVQCSCCHTVNLALEAN 98
+SV+CSCC T NL E++
Sbjct: 62 SSVRCSCCQTTNLVPESS 79
Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 35/76 (46%), Positives = 49/76 (64%)
Query: 64 QLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEA---NQVAHVNCGNCRMLLMYQYGARS 120
QLVC GC LLMY RGA++V+C+ C+T+N+ + +AH+ CG CR +LMY GA S
Sbjct: 4 QLVCHGCRNLLMYPRGASNVRCALCNTINMVPPPPPPHDMAHIICGGCRTMLMYTRGASS 63
Query: 121 VKCAVCNFVTAVGVSN 136
V+C+ C V S+
Sbjct: 64 VRCSCCQTTNLVPESS 79
Score = 150 (57.9 bits), Expect = 6.8e-30, Sum P(2) = 6.8e-30
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 97 ANQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTAVGVSN 136
++QVA +NCG+CR LMY YGA SVKCAVC FVT V +SN
Sbjct: 113 SSQVAQINCGHCRTTLMYPYGASSVKCAVCQFVTNVNMSN 152
Score = 90 (36.7 bits), Expect = 0.00057, P = 0.00057
Identities = 18/42 (42%), Positives = 28/42 (66%)
Query: 60 TEMAQLVCGGCHTLLMYIRGATSVQCSCCHTV-NLALEANQV 100
+++AQ+ CG C T LMY GA+SV+C+ C V N+ + +V
Sbjct: 114 SQVAQINCGHCRTTLMYPYGASSVKCAVCQFVTNVNMSNGRV 155
>TAIR|locus:2119622 [details] [associations]
symbol:LOL2 "AT4G21610" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0009617 "response to bacterium" evidence=IEP] GO:GO:0005634
GO:GO:0009617 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL022603
EMBL:AL161555 EMBL:AL035527 EMBL:BT011760 EMBL:BT012384
IPI:IPI00548269 PIR:T05169 RefSeq:NP_193892.1 UniGene:At.46979
PaxDb:O65426 PRIDE:O65426 EnsemblPlants:AT4G21610.1 GeneID:828248
KEGG:ath:AT4G21610 TAIR:At4g21610 eggNOG:NOG301378
HOGENOM:HOG000115009 InParanoid:O65426 OMA:NCKLLLM PhylomeDB:O65426
ProtClustDB:CLSN2685585 Genevestigator:O65426 InterPro:IPR005735
Pfam:PF06943 TIGRFAMs:TIGR01053 Uniprot:O65426
Length = 155
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 45/76 (59%), Positives = 56/76 (73%)
Query: 61 EMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQVAHVNCGNCRMLLMYQYGARS 120
E AQ+VCG C LL Y+RG+ V+CS C TVNL LEANQV VNC NC++LLMY YGA +
Sbjct: 57 EKAQMVCGSCRRLLSYLRGSKHVKCSSCQTVNLVLEANQVGQVNCNNCKLLLMYPYGAPA 116
Query: 121 VKCAVCNFVTAVGVSN 136
V+C+ CN VT + +N
Sbjct: 117 VRCSSCNSVTDISENN 132
Score = 109 (43.4 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 25/77 (32%), Positives = 37/77 (48%)
Query: 23 QSQLVCSGCRNLLLYPVGATSXXXXXXXXXXXXXXXGTEMAQLVCGGCHTLLMYIRGATS 82
++Q+VC CR LL Y G+ ++ Q+ C C LLMY GA +
Sbjct: 58 KAQMVCGSCRRLLSYLRGS-KHVKCSSCQTVNLVLEANQVGQVNCNNCKLLLMYPYGAPA 116
Query: 83 VQCSCCHTVNLALEANQ 99
V+CS C++V E N+
Sbjct: 117 VRCSSCNSVTDISENNK 133
Score = 87 (35.7 bits), Expect = 0.00049, P = 0.00049
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 95 LEANQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTAVGVSNHI 138
+E + A + CG+CR LL Y G++ VKC+ C V V +N +
Sbjct: 53 VEIPEKAQMVCGSCRRLLSYLRGSKHVKCSSCQTVNLVLEANQV 96
>UNIPROTKB|Q704V3 [details] [associations]
symbol:LOL5 "Protein LOL5" species:39947 "Oryza sativa
Japonica Group" [GO:0005634 "nucleus" evidence=IDA] [GO:0031349
"positive regulation of defense response" evidence=IMP] [GO:0045927
"positive regulation of growth" evidence=IMP] GO:GO:0005634
GO:GO:0045927 GO:GO:0006952 eggNOG:NOG12793 EMBL:AP008207
InterPro:IPR005735 Pfam:PF06943 TIGRFAMs:TIGR01053 EMBL:AJ620677
EMBL:AP002866 EMBL:AP003314 RefSeq:NP_001043558.1 UniGene:Os.1021
GeneID:4325320 KEGG:osa:4325320 Gramene:Q704V3
ProtClustDB:CLSN2691581 GO:GO:0031349 Uniprot:Q704V3
Length = 163
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 41/76 (53%), Positives = 54/76 (71%)
Query: 61 EMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQVAHVNCGNCRMLLMYQYGARS 120
E+ Q+VCG C LL Y RGA V C+CC T+N LEA++V V+CG+C LLMY +GA +
Sbjct: 67 EVGQMVCGSCRILLAYFRGAGYVHCTCCQTMNYVLEAHEVGKVHCGHCATLLMYPFGAPA 126
Query: 121 VKCAVCNFVTAVGVSN 136
VKC++C FVT +G N
Sbjct: 127 VKCSLCLFVTEIGERN 142
Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 29/79 (36%), Positives = 35/79 (44%)
Query: 20 NGAQSQLVCSGCRNLLLYPVGATSXXXXXXXXXXXXXXXGTEMAQLVCGGCHTLLMYIRG 79
N Q+VC CR LL Y GA E+ ++ CG C TLLMY G
Sbjct: 65 NKEVGQMVCGSCRILLAYFRGA-GYVHCTCCQTMNYVLEAHEVGKVHCGHCATLLMYPFG 123
Query: 80 ATSVQCSCCHTVNLALEAN 98
A +V+CS C V E N
Sbjct: 124 APAVKCSLCLFVTEIGERN 142
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.329 0.136 0.445 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 142 109 0.00091 102 3 11 22 0.48 29
29 0.41 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 5
No. of states in DFA: 493 (52 KB)
Total size of DFA: 111 KB (2076 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 10.08u 0.17s 10.25t Elapsed: 00:00:00
Total cpu time: 10.08u 0.17s 10.25t Elapsed: 00:00:00
Start: Sat May 11 02:50:43 2013 End: Sat May 11 02:50:43 2013