BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032373
(142 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q2KIP8|HACD2_BOVIN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 2 OS=Bos taurus GN=PTPLB PE=2 SV=2
Length = 254
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 77/148 (52%), Gaps = 11/148 (7%)
Query: 1 MQWCGRTLFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLR 60
+Q R + +VQ S+ + +AW + E+IRY FY + + P + + R
Sbjct: 109 IQVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTFSLLNHLPYLIKWAR 168
Query: 61 YTMFIPLYPIGVLGEMLLLYQAFPYMKEKNIFA-------NFFAILPFSYYNVVQVIFVM 113
YT+FI LYP+GV GE+L +Y A P++++ +++ NF F YY + +I +
Sbjct: 169 YTLFIVLYPMGVSGELLTIYAALPFVRQAGLYSISLPNKYNF----SFDYYAFLILIMIS 224
Query: 114 YPFAWIKLYSHMLKQRGSKLGKRQEKKK 141
Y + +LY HM+ QR L +E KK
Sbjct: 225 YIPLFPQLYFHMIHQRRKILSHTEEHKK 252
>sp|Q5RBK3|HACD2_PONAB Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 2 OS=Pongo abelii GN=PTPLB PE=2 SV=1
Length = 255
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 76/147 (51%), Gaps = 11/147 (7%)
Query: 2 QWCGRTLFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLRY 61
Q R + +VQ S+ + +AW + E+IRY FY + + P + + RY
Sbjct: 111 QVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTFSLLNHLPYLIKWARY 170
Query: 62 TMFIPLYPIGVLGEMLLLYQAFPYMKEKNIFA-------NFFAILPFSYYNVVQVIFVMY 114
T+FI LYP+GV GE+L +Y A P++++ +++ NF F YY + +I + Y
Sbjct: 171 TLFIVLYPMGVSGELLTIYAALPFVRQAGLYSISLPNKYNF----SFDYYAFLILIMISY 226
Query: 115 PFAWIKLYSHMLKQRGSKLGKRQEKKK 141
+ +LY HM+ QR L +E KK
Sbjct: 227 IPIFPQLYFHMIHQRRKILSHTEEHKK 253
>sp|Q6Y1H2|HACD2_HUMAN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 2 OS=Homo sapiens GN=PTPLB PE=1 SV=1
Length = 254
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 76/147 (51%), Gaps = 11/147 (7%)
Query: 2 QWCGRTLFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLRY 61
Q R + +VQ S+ + +AW + E+IRY FY + + P + + RY
Sbjct: 110 QVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTFSLLNHLPYLIKWARY 169
Query: 62 TMFIPLYPIGVLGEMLLLYQAFPYMKEKNIFA-------NFFAILPFSYYNVVQVIFVMY 114
T+FI LYP+GV GE+L +Y A P++++ +++ NF F YY + +I + Y
Sbjct: 170 TLFIVLYPMGVSGELLTIYAALPFVRQAGLYSISLPNKYNF----SFDYYAFLILIMISY 225
Query: 115 PFAWIKLYSHMLKQRGSKLGKRQEKKK 141
+ +LY HM+ QR L +E KK
Sbjct: 226 IPIFPQLYFHMIHQRRKILSHTEEHKK 252
>sp|Q9D3B1|HACD2_MOUSE Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 2 OS=Mus musculus GN=Ptplb PE=2 SV=1
Length = 254
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 76/147 (51%), Gaps = 11/147 (7%)
Query: 2 QWCGRTLFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLRY 61
Q R + +VQ S+ + +AW + E+IRY FY + + P + + RY
Sbjct: 110 QVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTFSLLNHLPYIIKWARY 169
Query: 62 TMFIPLYPIGVLGEMLLLYQAFPYMKEKNIFA-------NFFAILPFSYYNVVQVIFVMY 114
T+FI LYP+GV GE+L +Y A P++++ +++ NF F Y+ + +I + Y
Sbjct: 170 TLFIVLYPMGVTGELLTIYAALPFVRQAGLYSISLPNKYNF----SFDYHAFLILIMISY 225
Query: 115 PFAWIKLYSHMLKQRGSKLGKRQEKKK 141
+ +LY HM+ QR L +E KK
Sbjct: 226 IPLFPQLYFHMIHQRRKVLSHTEEHKK 252
>sp|Q9QY80|HACD1_MOUSE Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 1 OS=Mus musculus GN=Ptpla PE=2 SV=1
Length = 281
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 72/133 (54%), Gaps = 5/133 (3%)
Query: 1 MQWCGRTLFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLR 60
+Q R + I +Q+ S+ + ++W + E+ RY FY + + P ++ + R
Sbjct: 136 VQVSSRIFMVWLITHSIKPIQNEESVVLFLVSWTVTEITRYSFYTFSLLDHLPHFIKWAR 195
Query: 61 YTMFIPLYPIGVLGEMLLLYQAFPYMKEKNIFA----NFFAILPFSYYNVVQVIFVMYPF 116
Y +FI LYP+GV GE+L +Y A PY+K+ +F+ N + + F YY + + Y
Sbjct: 196 YNLFIILYPVGVAGELLTIYAALPYVKKSGMFSVRLPNKYNV-SFDYYYFLLITMASYIP 254
Query: 117 AWIKLYSHMLKQR 129
+ +LY HML+QR
Sbjct: 255 LFPQLYFHMLRQR 267
>sp|Q8K2C9|HACD3_MOUSE Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 3 OS=Mus musculus GN=ptplad1 PE=1 SV=2
Length = 362
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 78/146 (53%), Gaps = 11/146 (7%)
Query: 1 MQWCGRTLFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLR 60
+Q+ GR + + ++Q+ +F F +W IE+ RYPFY L+ I LT+LR
Sbjct: 219 IQFLGRNFILFLVFGTMEEMQNKAVVFFVFYSWSAIEIFRYPFYMLSCIDMDWKVLTWLR 278
Query: 61 YTMFIPLYPIGVLGEMLLLYQAFPYMKEKNIFANFFAI-------LPFSYYNVVQVIFVM 113
YTM+IPLYP+G L E + + Q+ P E F+ F + + FS++ +QV VM
Sbjct: 279 YTMWIPLYPLGCLSEAVAVIQSIPVFNESGRFS--FTLPYPVKMKVRFSFF--LQVYLVM 334
Query: 114 YPFAWIKLYSHMLKQRGSKLGKRQEK 139
+ H+ KQR + G++++K
Sbjct: 335 LFLGLYINFRHLYKQRRRRYGQKKKK 360
>sp|Q4W1W1|HACD1_CANFA Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 1 OS=Canis familiaris GN=PTPLA PE=2 SV=1
Length = 249
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 72/133 (54%), Gaps = 5/133 (3%)
Query: 1 MQWCGRTLFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLR 60
+Q R + I +Q+ S+ + +AW + E+ RY FY + + P ++ + R
Sbjct: 104 VQVSSRIFMVWLITHSIKPIQNEESVVLFLVAWTVTEITRYSFYTFSLLDHLPYFIKWAR 163
Query: 61 YTMFIPLYPIGVLGEMLLLYQAFPYMKEKNIFA----NFFAILPFSYYNVVQVIFVMYPF 116
Y FI LYP+GV+GE+L +Y A PY+K+ +F+ N + + F YY + + Y
Sbjct: 164 YNFFIILYPVGVVGELLTIYAALPYVKKTGMFSIRLPNKYNV-SFDYYYFLLITMASYIP 222
Query: 117 AWIKLYSHMLKQR 129
+ +LY HML+QR
Sbjct: 223 LFPQLYFHMLRQR 235
>sp|Q9N1R5|HACD1_SHEEP Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 1 OS=Ovis aries GN=PTPLA PE=2 SV=1
Length = 288
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 5/133 (3%)
Query: 1 MQWCGRTLFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLR 60
+Q R + I +Q+ S+ + +AW + E+ RY FY + + P ++ + R
Sbjct: 143 VQVSSRIFMVWLVTHSIKPIQNEESVVLFLVAWTVTEITRYSFYTFSLLDHLPYFIKWAR 202
Query: 61 YTMFIPLYPIGVLGEMLLLYQAFPYMKEKNIFA----NFFAILPFSYYNVVQVIFVMYPF 116
Y FI LYP+GV GE+L +Y A PY+K+ +F+ N + + F YY + + Y
Sbjct: 203 YNFFIILYPVGVAGELLTIYAALPYVKKTGMFSIRLPNKYNV-SFDYYYFLLITMASYIP 261
Query: 117 AWIKLYSHMLKQR 129
+ +LY HML+QR
Sbjct: 262 LFPQLYFHMLRQR 274
>sp|B0YJ81|HACD1_HUMAN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 1 OS=Homo sapiens GN=PTPLA PE=1 SV=1
Length = 288
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 71/133 (53%), Gaps = 5/133 (3%)
Query: 1 MQWCGRTLFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLR 60
+Q R + I +Q+ S+ + +AW + E+ RY FY + + P ++ + R
Sbjct: 143 VQVSSRIFMVWLITHSIKPIQNEESVVLFLVAWTVTEITRYSFYTFSLLDHLPYFIKWAR 202
Query: 61 YTMFIPLYPIGVLGEMLLLYQAFPYMKEKNIFA----NFFAILPFSYYNVVQVIFVMYPF 116
Y FI LYP+GV GE+L +Y A P++K+ +F+ N + + F YY + + Y
Sbjct: 203 YNFFIILYPVGVAGELLTIYAALPHVKKTGMFSIRLPNKYNV-SFDYYYFLLITMASYIP 261
Query: 117 AWIKLYSHMLKQR 129
+ +LY HML+QR
Sbjct: 262 LFPQLYFHMLRQR 274
>sp|Q7SY06|HADC_DANRE Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase OS=Danio rerio GN=ptplad1 PE=2 SV=2
Length = 359
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 51/93 (54%)
Query: 1 MQWCGRTLFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLR 60
+Q GR V + +Q+ P +F F W IE+ RYPFY L I LT+LR
Sbjct: 216 IQVMGRNFILFVIFGSLEDMQNKPVVFFVFYLWSTIEIFRYPFYMLACIDTEWKLLTWLR 275
Query: 61 YTMFIPLYPIGVLGEMLLLYQAFPYMKEKNIFA 93
YT+++PLYP+GVL E + + Q+ P E + +
Sbjct: 276 YTIWMPLYPLGVLAEAVAVIQSIPIFDETKLLS 308
>sp|Q5NVQ2|PTAD1_PONAB Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 3 OS=Pongo abelii GN=PTPLAD1 PE=2 SV=1
Length = 364
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 11/146 (7%)
Query: 1 MQWCGRTLFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLR 60
+Q GR + + ++Q+ +F F W IE+ RY FY L I LT+LR
Sbjct: 221 IQLLGRNFILFIIFGTMEEMQNKAVVFFVFYLWSAIEIFRYSFYMLTCIDMDWEVLTWLR 280
Query: 61 YTMFIPLYPIGVLGEMLLLYQAFPYMKEKNIFANFFAI-------LPFSYYNVVQVIFVM 113
YT++IPLYP+G L E + + Q+ P E F+ F + + FS++ +Q+ +M
Sbjct: 281 YTLWIPLYPLGCLAEAVSVVQSIPIFNETGRFS--FTLPYPVKIKVRFSFF--LQIYLIM 336
Query: 114 YPFAWIKLYSHMLKQRGSKLGKRQEK 139
+ H+ KQR + G++++K
Sbjct: 337 IFLGLYINFRHLYKQRRRRYGQKKKK 362
>sp|Q9P035|HACD3_HUMAN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 3 OS=Homo sapiens GN=PTPLAD1 PE=1 SV=2
Length = 362
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 11/146 (7%)
Query: 1 MQWCGRTLFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLR 60
+Q GR + + ++Q+ +F F W IE+ RY FY L I LT+LR
Sbjct: 219 IQLLGRNFILFIIFGTMEEMQNKAVVFFVFYLWSAIEIFRYSFYMLTCIDMDWKVLTWLR 278
Query: 61 YTMFIPLYPIGVLGEMLLLYQAFPYMKEKNIFANFFAI-------LPFSYYNVVQVIFVM 113
YT++IPLYP+G L E + + Q+ P E F+ F + + FS++ +Q+ +M
Sbjct: 279 YTLWIPLYPLGCLAEAVSVIQSIPIFNETGRFS--FTLPYPVKIKVRFSFF--LQIYLIM 334
Query: 114 YPFAWIKLYSHMLKQRGSKLGKRQEK 139
+ H+ KQR + G++++K
Sbjct: 335 IFLGLYINFRHLYKQRRRRYGQKKKK 360
>sp|A7YY55|HACD3_BOVIN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 3 OS=Bos taurus GN=PTPLAD1 PE=2 SV=1
Length = 362
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 11/145 (7%)
Query: 2 QWCGRTLFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLRY 61
Q GR + + ++Q+ +F F W +E+ RYPFY L+ I LT+LRY
Sbjct: 220 QLLGRNFILFIIFGTMEEMQNKAVVFFVFYIWSTVEIFRYPFYMLSCIDMDWKVLTWLRY 279
Query: 62 TMFIPLYPIGVLGEMLLLYQAFPYMKEKNIFANFFAI-------LPFSYYNVVQVIFVMY 114
T++IPLYP+G L E + + Q+ P E F+ F + + FS++ +Q+ ++
Sbjct: 280 TVWIPLYPMGCLAEAVSVIQSIPVFNETGRFS--FTLPYPVKIKVRFSFF--LQIYLILL 335
Query: 115 PFAWIKLYSHMLKQRGSKLGKRQEK 139
+ ++ KQR + G++++K
Sbjct: 336 FLGLYVNFRYLYKQRRRRFGQKKKK 360
>sp|Q5VWC8|HACD4_HUMAN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 4 OS=Homo sapiens GN=PTPLAD2 PE=1 SV=1
Length = 232
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 78/139 (56%), Gaps = 9/139 (6%)
Query: 8 LFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLRYTMFIPL 67
LF ++T++E +VQ+ + + F+ W L++++RY + L+ IG LT+L T+++P+
Sbjct: 98 LFVVITSQE--EVQEKYVVCVLFVFWNLLDMVRYTYSMLSVIGISYAVLTWLSQTLWMPI 155
Query: 68 YPIGVLGEMLLLYQAFPYMKEKNIFANFFAILPFS---YYNVVQVIFVMYPFAWIKL-YS 123
YP+ VL E +YQ+ PY + F + LPF Y+ V I++M F + YS
Sbjct: 156 YPLCVLAEAFAIYQSLPYFES---FGTYSTKLPFDLSIYFPYVLKIYLMMLFIGMYFTYS 212
Query: 124 HMLKQRGSKLGKRQEKKKK 142
H+ +R LG KKKK
Sbjct: 213 HLYSERRDILGIFPIKKKK 231
>sp|Q5ZM57|HACD_CHICK Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase OS=Gallus gallus GN=PTPLAD1 PE=2 SV=1
Length = 362
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 72/146 (49%), Gaps = 7/146 (4%)
Query: 1 MQWCGRTLFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLR 60
+Q GR V + ++Q +F F W +IE+ RYP+Y L+ +G LT+LR
Sbjct: 219 IQVFGRNFILFVVLGSLEEMQSKAVVFFLFYFWSIIELFRYPYYMLSCMGIEWKPLTWLR 278
Query: 61 YTMFIPLYPIGVLGEMLLLYQAFPYMKEKNIFA-----NFFAILPFSYYNVVQVIFVMYP 115
YT +IPLYP+G L E + L Q+ P E F+ + FS+ ++Q+ +
Sbjct: 279 YTSWIPLYPLGGLAEAVCLIQSIPIFSETGKFSLGLPNPLNVTIQFSF--LLQMYLIALF 336
Query: 116 FAWIKLYSHMLKQRGSKLGKRQEKKK 141
+ ++ KQR LG ++ K K
Sbjct: 337 LGLFVNFRYLYKQRKQHLGPKKRKMK 362
>sp|O17040|HACD_CAEEL Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase hpo-8 OS=Caenorhabditis elegans GN=hpo-8
PE=3 SV=2
Length = 218
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 67/117 (57%), Gaps = 6/117 (5%)
Query: 30 FLAWCLIEVIRYPFYALNTIGACPPW-LTYLRYTMFIPLYPIGVLGEMLLLYQAFPYMKE 88
+AW + EVIRY FYAL+ + P+ L YLRYT+F LYP+GV GE+L L+ + + E
Sbjct: 103 LVAWSVTEVIRYSFYALSVLKQPIPYFLLYLRYTLFYVLYPMGVSGELLTLFASLNEVDE 162
Query: 89 KNIFA----NFFAILPFSYYNVVQVIFVMYPFAWIKLYSHMLKQRGSKLGKRQEKKK 141
K I N + S++ V+ + + Y + +LY +M+ QR LG +KK+
Sbjct: 163 KKILTLEMPNRLN-MGISFWWVLIIAALSYIPGFPQLYFYMIGQRKKILGGGSKKKQ 218
>sp|Q8VZB2|PAS2_ARATH Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase PASTICCINO 2 OS=Arabidopsis thaliana GN=PAS2
PE=1 SV=1
Length = 221
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 68/126 (53%), Gaps = 6/126 (4%)
Query: 19 QVQDHPSLFITFLAWCLIEVIRYPFYAL-NTIGACPPWLTYLRYTMFIPLYPIGVLGEML 77
+V+ H + ++W + E+IRY F+ +G P W +LRY+ F+ LYP G+ E+
Sbjct: 97 EVRSHFLVTSLVISWSITEIIRYSFFGFKEALGFAPSWHLWLRYSSFLLLYPTGITSEVG 156
Query: 78 LLYQAFPYMKEKNIFA-NFFAILPFS---YYNVVQVIFVMYPFAWIKLYSHMLKQRGSKL 133
L+Y A P++K +++ IL FS +Y + V+ + P + +Y +ML QR L
Sbjct: 157 LIYLALPHIKTSEMYSVRMPNILNFSFDFFYATILVLAIYVPGS-PHMYRYMLGQRKRAL 215
Query: 134 GKRQEK 139
K + +
Sbjct: 216 SKSKRE 221
>sp|O14346|HACD_SCHPO Probable very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=SPBC19C2.15c PE=3 SV=2
Length = 208
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 62/122 (50%), Gaps = 11/122 (9%)
Query: 20 VQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLRYTMFIPLYPIGVLGEMLLL 79
++ P +AW + E+IRY FYA N G P +LT+LRY F+ LYPIG E LL+
Sbjct: 97 IEGSPIYLSMIIAWSITEIIRYAFYAFNLNGDIPAFLTWLRYNTFLILYPIGAGSEFLLV 156
Query: 80 YQAFPYMKEKNIFANFFAILPFSYYNVVQVIFVMYPFAWIKLYSHMLKQRGSKLGKRQEK 139
++ I A + L + ++ I YP +Y+HML QR K+ KR
Sbjct: 157 LKS-------RIAAQYVWSLNKLLWPILMSI---YPPGLYIMYTHMLAQR-RKISKRAAA 205
Query: 140 KK 141
++
Sbjct: 206 RR 207
>sp|Q5ZEJ0|PAS2B_ORYSJ Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase PASTICCINO 2B OS=Oryza sativa subsp.
japonica GN=PAS2B PE=2 SV=1
Length = 221
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 64/119 (53%), Gaps = 14/119 (11%)
Query: 21 QDHPSLFITFL--AWCLIEVIRYPFYAL-NTIGACPPWLTYLRYTMFIPLYPIGVLGEML 77
+ H + +T L +W + E+IRY F+ + T G P WL +LRY+ F+ LYP G+ E+
Sbjct: 97 ETHSHILVTSLVISWSITEIIRYSFFGMKETFGFAPSWLLWLRYSTFMVLYPTGISSEVG 156
Query: 78 LLYQAFPYMKEKNIFA-------NFFAILPFSYYNVVQVIFVMYPFAWIKLYSHMLKQR 129
L+Y A PYMK + NF FSY +++ + +Y ++++ML QR
Sbjct: 157 LIYIALPYMKATEKYCLRMPNKWNF--SFDFSYASILSL--AVYVPGSPHMFTYMLAQR 211
>sp|A2AKM2|HACD4_MOUSE Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 4 OS=Mus musculus GN=Ptplad2 PE=2 SV=2
Length = 232
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 8 LFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLRYTMFIPL 67
LF ++T++E +VQ+ + + F+ W L++++RY + L+ IG LT+L T+++P+
Sbjct: 98 LFGVITSQE--EVQEKCVVCVLFILWNLLDMVRYTYSMLSVIGTSYAALTWLSQTLWMPI 155
Query: 68 YPIGVLGEMLLLYQAFPYMKEKNIFANFFAILPFSYYN----VVQVIFVMYPFAWIKLYS 123
YP+ VL E +YQ+ PY + F +LPF V+++ +M YS
Sbjct: 156 YPLCVLAEAFTIYQSLPYFES---FGTNSTVLPFDLSTCFPYVLKLYLMMLFIGMYFTYS 212
Query: 124 HMLKQRGSKLGKRQEKKKK 142
H+ +R L K+K
Sbjct: 213 HLYTERKDFLRVFSVKQKN 231
>sp|Q7XSZ4|PAS2A_ORYSJ Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase PASTICCINO 2A OS=Oryza sativa subsp.
japonica GN=PAS2A PE=2 SV=2
Length = 221
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 21 QDHPSLFITFL--AWCLIEVIRYPFYAL-NTIGACPPWLTYLRYTMFIPLYPIGVLGEML 77
+ H + +T L +W + E+IRY F+ + G P WL +LRY+ F+ LYP G+ E+
Sbjct: 97 ETHSHILVTSLVISWSITEIIRYSFFGMKEAFGFAPSWLLWLRYSTFMVLYPTGISSEVG 156
Query: 78 LLYQAFPYMKEKN 90
L+Y A PYMK
Sbjct: 157 LIYIALPYMKASE 169
>sp|Q0P5C7|HACD4_BOVIN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 4 OS=Bos taurus GN=PTPLAD2 PE=2 SV=1
Length = 231
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 74/138 (53%), Gaps = 9/138 (6%)
Query: 8 LFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLRYTMFIPL 67
LF ++T++E +VQ+ + + F+ L++++RY + L+ IG LT+ T+++P+
Sbjct: 98 LFMVITSQE--EVQEKYVVCVLFIFRNLLDMVRYTYSMLSVIGISYAVLTWFSQTLWMPI 155
Query: 68 YPIGVLGEMLLLYQAFPYMKEKNIFANFFAILPFS---YYNVVQVIFVMYPFAWIKL-YS 123
YP+ VL E +YQ+ PY + F + LPF Y+ V I++M F + Y+
Sbjct: 156 YPLCVLAEAFTIYQSLPYFES---FGTYSTKLPFDLSFYFPYVLKIYLMMLFVGMYFTYN 212
Query: 124 HMLKQRGSKLGKRQEKKK 141
H+ +R L KKK
Sbjct: 213 HLYSERRDILRVFPNKKK 230
>sp|Q6GNB5|HACD_XENLA Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase OS=Xenopus laevis GN=ptplad2 PE=2 SV=1
Length = 218
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 70/138 (50%), Gaps = 5/138 (3%)
Query: 8 LFFLVTAREIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPPWLTYLRYTMFIPL 67
LF ++T++E +VQ + F W L +VIRYP+ L + LT+LR+T +I
Sbjct: 83 LFVVITSQE--EVQSKYIVCALFFIWNLWDVIRYPYDMLAAVDTDYSALTWLRHTWWIVA 140
Query: 68 YPIGVLGEMLLLYQAFPYMKEKNIFANFFAI---LPFSYYNVVQVIFVMYPFAWIKLYSH 124
YP+ VL E +Y++ PY + ++ A+ L F + ++ + V+ P + + S
Sbjct: 141 YPLSVLAEAYTIYESLPYFESLGTYSFKMALPVSLSFHFPYILTLYLVLQPVGMLYICSC 200
Query: 125 MLKQRGSKLGKRQEKKKK 142
+ +R ++ + KK
Sbjct: 201 LWSERKQYFQRKLKLKKN 218
>sp|Q49460|Y468_MYCGE Uncharacterized ABC transporter permease MG468 OS=Mycoplasma
genitalium (strain ATCC 33530 / G-37 / NCTC 10195)
GN=MG468 PE=3 SV=3
Length = 1783
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 10/115 (8%)
Query: 24 PSLFIT--FLAWCLIEVIRYPFYALNTIGACPPWLTYLRYTMFIP------LYPIGVLGE 75
P +FIT L ++E ++ F +L IG T FIP L IGVL
Sbjct: 1667 PFIFITCVVLGISMLEEMKRIFISLKAIGYRDVQNLISLLTFFIPAFVLALLISIGVLAG 1726
Query: 76 MLLLYQAFPYMKEKNIFANFFAILPFSYYNVV--QVIFVMYPFAWIKLYSHMLKQ 128
+L+ QA + + N F LP+ V+ IFV+ + WIKL S LK+
Sbjct: 1727 VLIGIQAVVFNVAQVFLTNVFEFLPYMVGIVLFGVTIFVIGSYFWIKLRSAELKE 1781
>sp|P40857|PHS1_YEAST Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase PHS1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=PHS1 PE=1 SV=1
Length = 217
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 30 FLAWCLIEVIRYPFYALNTI--GACPPWLTYLRYTMFIPLYPIGVLGEMLLLYQAFPYMK 87
LAW + E++RY +Y + P L LRY +F LYP GV E+ ++Y A
Sbjct: 109 LLAWSITEIVRYLYYFFMLVFKNGAPKILILLRYNLFWILYPTGVASELRIIYCAL---- 164
Query: 88 EKNIFANFFAILPFSYYNVVQVIFVMYPFAWIKLYSHMLKQR 129
N + +++L Y ++ + Y + L+ HM+ QR
Sbjct: 165 --NAAESQYSLL---YKRILIAAMLAYIPGFPMLFLHMVAQR 201
>sp|P75109|Y684_MYCPN Uncharacterized ABC transporter permease MG468 homolog OS=Mycoplasma
pneumoniae (strain ATCC 29342 / M129) GN=MPN_684 PE=1
SV=1
Length = 1882
Score = 37.4 bits (85), Expect = 0.030, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 51/115 (44%), Gaps = 10/115 (8%)
Query: 24 PSLFIT--FLAWCLIEVIRYPFYALNTIGACPPWLTYLRYTMFIP------LYPIGVLGE 75
P +FIT L ++E ++ F +L +IG FIP L I +L
Sbjct: 1766 PFIFITCVVLGISMLEEMKRIFISLKSIGYKDSQNLVSLLCFFIPAFVLSLLISIAILAG 1825
Query: 76 MLLLYQAFPYMKEKNIFANFFAILPFSYYNVV--QVIFVMYPFAWIKLYSHMLKQ 128
+L+ QA + + N F LP+ V+ IFV+ + WIKL S LK+
Sbjct: 1826 LLVGVQALVFGVAQVFLTNVFEFLPYMVGIVLFGATIFVIGSYFWIKLRSAELKE 1880
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.333 0.146 0.485
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,696,314
Number of Sequences: 539616
Number of extensions: 1880827
Number of successful extensions: 4054
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 4013
Number of HSP's gapped (non-prelim): 34
length of query: 142
length of database: 191,569,459
effective HSP length: 105
effective length of query: 37
effective length of database: 134,909,779
effective search space: 4991661823
effective search space used: 4991661823
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 55 (25.8 bits)