BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032375
(142 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 79/136 (58%), Gaps = 3/136 (2%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DG+G +D +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 66 VGLIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFD 125
+ ++ ++ +++REAF ++D D GFIS +L+ ++ LGE + +E MI D
Sbjct: 69 LTMM-ARKMKDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 127
Query: 126 LNGDGVLSFEEFRIMM 141
++GDG +++EEF MM
Sbjct: 128 IDGDGQVNYEEFVTMM 143
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE++ + +EAF L+D D G I+ +L ++ LG++ + E + MI+ D +G+G +
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 134 FEEFRIMM 141
F EF MM
Sbjct: 65 FPEFLTMM 72
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 74.3 bits (181), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 82/141 (58%), Gaps = 10/141 (7%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DG+G +D +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 66 VGLI----EGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMI 121
+ L+ + +EEKLK EAF ++D D GFIS +L+ ++ LGE + +E MI
Sbjct: 69 LNLMARKMKDTDSEEKLK---EAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 125
Query: 122 DRFDLNGDGVLSFEEF-RIMM 141
D++GDG +++EEF ++MM
Sbjct: 126 READVDGDGQVNYEEFVQVMM 146
Score = 45.8 bits (107), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
+E++ + +EAF L+D D G I+ +L ++ LG++ + E + MI+ D +G+G +
Sbjct: 5 TDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 134 FEEFRIMM 141
F EF +M
Sbjct: 65 FPEFLNLM 72
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 73.9 bits (180), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 79/142 (55%), Gaps = 13/142 (9%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DG+G +D +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 66 VGLIEGASAEEKLKD------LREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRM 119
+ ++ K+KD +REAF ++D D GFIS +L+ ++ LGE + +E
Sbjct: 69 LTMMA-----RKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 123
Query: 120 MIDRFDLNGDGVLSFEEFRIMM 141
MI D++GDG +++EEF MM
Sbjct: 124 MIREADIDGDGQVNYEEFVTMM 145
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE++ + +EAF L+D D G I+ +L ++ LG++ + E + MI+ D +G+G +
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 134 FEEFRIMM 141
F EF MM
Sbjct: 65 FPEFLTMM 72
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 73.9 bits (180), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 79/142 (55%), Gaps = 13/142 (9%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DG+G +D +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 66 VGLIEGASAEEKLKD------LREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRM 119
+ ++ K+KD +REAF ++D D GFIS +L+ ++ LGE + +E
Sbjct: 69 LTMMA-----RKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 123
Query: 120 MIDRFDLNGDGVLSFEEFRIMM 141
MI D++GDG +++EEF MM
Sbjct: 124 MIREADIDGDGQVNYEEFVTMM 145
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE++ + +EAF L+D D G I+ +L ++ LG++ + E + MI+ D +G+G +
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 134 FEEFRIMM 141
F EF MM
Sbjct: 65 FPEFLTMM 72
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 73.6 bits (179), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 79/142 (55%), Gaps = 13/142 (9%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DG+G +D +
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGNGTIDFPEF 69
Query: 66 VGLIEGASAEEKLKD------LREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRM 119
+ ++ K+KD +REAF ++D D GFIS +L+ ++ LGE + +E
Sbjct: 70 LTMMA-----RKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 124
Query: 120 MIDRFDLNGDGVLSFEEFRIMM 141
MI D++GDG +++EEF MM
Sbjct: 125 MIREADIDGDGQVNYEEFVTMM 146
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE++ + +EAF L+D D G I+ +L ++ LG++ + E + MI+ D +G+G +
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 134 FEEFRIMM 141
F EF MM
Sbjct: 66 FPEFLTMM 73
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 73.6 bits (179), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 79/142 (55%), Gaps = 13/142 (9%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DG+G +D +
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGNGTIDFPEF 69
Query: 66 VGLIEGASAEEKLKD------LREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRM 119
+ ++ K+KD +REAF ++D D GFIS +L+ ++ LGE + +E
Sbjct: 70 LTMMA-----RKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 124
Query: 120 MIDRFDLNGDGVLSFEEFRIMM 141
MI D++GDG +++EEF MM
Sbjct: 125 MIREADIDGDGQVNYEEFVTMM 146
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE++ + +EAF L+D D G I+ +L ++ LG++ + E + MI+ D +G+G +
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 134 FEEFRIMM 141
F EF MM
Sbjct: 66 FPEFLTMM 73
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 73.6 bits (179), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 79/142 (55%), Gaps = 13/142 (9%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DG+G +D +
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGNGTIDFPEF 69
Query: 66 VGLIEGASAEEKLKD------LREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRM 119
+ ++ K+KD +REAF ++D D GFIS +L+ ++ LGE + +E
Sbjct: 70 LTMMA-----RKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 124
Query: 120 MIDRFDLNGDGVLSFEEFRIMM 141
MI D++GDG +++EEF MM
Sbjct: 125 MIRESDIDGDGQVNYEEFVTMM 146
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE++ + +EAF L+D D G I+ +L ++ LG++ + E + MI+ D +G+G +
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 134 FEEFRIMM 141
F EF MM
Sbjct: 66 FPEFLTMM 73
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 73.6 bits (179), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 79/142 (55%), Gaps = 13/142 (9%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DGDG +D +
Sbjct: 311 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGDGTIDFPEF 368
Query: 66 VGLIEGASAEEKLKD------LREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRM 119
+ ++ K+KD +REAF ++D D G+IS +L+ ++ LGE + +E
Sbjct: 369 LTMMA-----RKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 423
Query: 120 MIDRFDLNGDGVLSFEEFRIMM 141
MI D++GDG +++EEF MM
Sbjct: 424 MIREADIDGDGQVNYEEFVQMM 445
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 73/141 (51%), Gaps = 11/141 (7%)
Query: 1 MVKGREYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFL 60
M +G ER ++F ++G+ K +E+K GD L+N +E ++ +D DG +
Sbjct: 243 MPEGYIQERT-IFFKDDGNYKTR-AEVKFE-------GDTLVNRIE--LKGIDFKEDGNI 291
Query: 61 DLEDLVGLIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMM 120
L EE++ + +EAF L+D D G I+ +L ++ LG++ + E + M
Sbjct: 292 LGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDM 351
Query: 121 IDRFDLNGDGVLSFEEFRIMM 141
I+ D +GDG + F EF MM
Sbjct: 352 INEVDADGDGTIDFPEFLTMM 372
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 73.6 bits (179), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 79/142 (55%), Gaps = 13/142 (9%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DGDG +D +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGDGTIDFPEF 68
Query: 66 VGLIEGASAEEKLKD------LREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRM 119
+ ++ K+KD +REAF ++D D G+IS +L+ ++ LGE + +E
Sbjct: 69 LTMMA-----RKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 123
Query: 120 MIDRFDLNGDGVLSFEEFRIMM 141
MI D++GDG +++EEF MM
Sbjct: 124 MIREADIDGDGQVNYEEFVQMM 145
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE++ + +EAF L+D D G I+ +L ++ LG++ + E + MI+ D +GDG +
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTID 64
Query: 134 FEEFRIMM 141
F EF MM
Sbjct: 65 FPEFLTMM 72
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 73.2 bits (178), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 78/136 (57%), Gaps = 2/136 (1%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DG+G +D +
Sbjct: 7 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGNGTIDFPEF 64
Query: 66 VGLIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFD 125
+ ++ + +++REAF ++D D G+IS +L+ ++ LGE + +E MI +
Sbjct: 65 LTMMARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAN 124
Query: 126 LNGDGVLSFEEFRIMM 141
++GDG +++EEF MM
Sbjct: 125 IDGDGQVNYEEFVQMM 140
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE++ + +EAF L+D D G I+ +L ++ LG++ + E + MI+ D +G+G +
Sbjct: 1 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 60
Query: 134 FEEFRIMM 141
F EF MM
Sbjct: 61 FPEFLTMM 68
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 72.8 bits (177), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 79/142 (55%), Gaps = 13/142 (9%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DG+G +D +
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGNGTIDFPEF 69
Query: 66 VGLIEGASAEEKLKD------LREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRM 119
+ ++ K+KD +REAF ++D D G+IS +L+ ++ LGE + +E
Sbjct: 70 LTMMA-----RKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQ 124
Query: 120 MIDRFDLNGDGVLSFEEFRIMM 141
MI D++GDG +++EEF MM
Sbjct: 125 MIREADIDGDGQVNYEEFVQMM 146
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE++ + +EAF L+D D G I+ +L ++ LG++ + E + MI+ D +G+G +
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 134 FEEFRIMM 141
F EF MM
Sbjct: 66 FPEFLTMM 73
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 72.8 bits (177), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 77/137 (56%), Gaps = 3/137 (2%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DG+G +D +
Sbjct: 11 EFKEAFALFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 66 VGLIEGASAEE-KLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRF 124
+ L+ E+ ++L EAF ++D D G IS +L+ ++ LGE + DE MI
Sbjct: 69 LSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREA 128
Query: 125 DLNGDGVLSFEEFRIMM 141
D++GDG +++EEF MM
Sbjct: 129 DIDGDGHINYEEFVRMM 145
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE++ + +EAF L+D D G I+ +L ++ LG++ + E + MI+ D +G+G +
Sbjct: 5 TEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 134 FEEFRIMM 141
F EF +M
Sbjct: 65 FPEFLSLM 72
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 72.8 bits (177), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 77/137 (56%), Gaps = 3/137 (2%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DG+G +D +
Sbjct: 11 EFKEAFALFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 66 VGLIEGASAEE-KLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRF 124
+ L+ E+ ++L EAF ++D D G IS +L+ ++ LGE + DE MI
Sbjct: 69 LSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREA 128
Query: 125 DLNGDGVLSFEEFRIMM 141
D++GDG +++EEF MM
Sbjct: 129 DIDGDGHINYEEFVRMM 145
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE++ + +EAF L+D D G I+ +L ++ LG++ + E + MI+ D +G+G +
Sbjct: 5 TEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 134 FEEFRIMM 141
F EF +M
Sbjct: 65 FPEFLSLM 72
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 72.8 bits (177), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 78/137 (56%), Gaps = 3/137 (2%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLED- 64
E++ F FD++GDG ++ E+ M + G + E++ I +D DGDG +D +
Sbjct: 303 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGDGTIDFPEF 360
Query: 65 LVGLIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRF 124
L+ + + +++REAF ++D D G+IS +L+ ++ LGE + +E MI
Sbjct: 361 LIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA 420
Query: 125 DLNGDGVLSFEEFRIMM 141
D++GDG +++EEF MM
Sbjct: 421 DIDGDGQVNYEEFVQMM 437
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE++ + +EAF L+D D G I+ +L ++ LG++ + E + MI+ D +GDG +
Sbjct: 297 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTID 356
Query: 134 FEEFRIMM 141
F EF IMM
Sbjct: 357 FPEFLIMM 364
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 72.8 bits (177), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 78/137 (56%), Gaps = 3/137 (2%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DGDG +D +
Sbjct: 311 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGDGTIDFPEF 368
Query: 66 VGLI-EGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRF 124
+ ++ + +++REAF ++D D G+IS +L+ ++ LGE + +E MI
Sbjct: 369 LTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA 428
Query: 125 DLNGDGVLSFEEFRIMM 141
D++GDG +++EEF MM
Sbjct: 429 DIDGDGQVNYEEFVQMM 445
Score = 55.8 bits (133), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 74/141 (52%), Gaps = 11/141 (7%)
Query: 1 MVKGREYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFL 60
M +G ER ++F ++G+ K +E+K GD L+N +E ++ +D DG +
Sbjct: 243 MPEGYIQERT-IFFKDDGNYKTR-AEVKFE-------GDTLVNRIE--LKGIDFKEDGNI 291
Query: 61 DLEDLVGLIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMM 120
L + EE++ + +EAF L+D D G I+ +L ++ LG++ + E + M
Sbjct: 292 LGHKLEYNLPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDM 351
Query: 121 IDRFDLNGDGVLSFEEFRIMM 141
I+ D +GDG + F EF MM
Sbjct: 352 INEVDADGDGTIDFPEFLTMM 372
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 72.8 bits (177), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 78/137 (56%), Gaps = 3/137 (2%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DGDG +D +
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGDGTIDFPEF 369
Query: 66 VGLI-EGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRF 124
+ ++ + +++REAF ++D D G+IS +L+ ++ LGE + +E MI
Sbjct: 370 LTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA 429
Query: 125 DLNGDGVLSFEEFRIMM 141
D++GDG +++EEF MM
Sbjct: 430 DIDGDGQVNYEEFVQMM 446
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 73/141 (51%), Gaps = 11/141 (7%)
Query: 1 MVKGREYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFL 60
M +G ER ++F ++G+ K +E+K GD L+N +E ++ +D DG +
Sbjct: 244 MPEGYIQERT-IFFKDDGNYKTR-AEVKFE-------GDTLVNRIE--LKGIDFKEDGNI 292
Query: 61 DLEDLVGLIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMM 120
L EE++ + +EAF L+D D G I+ +L ++ LG++ + E + M
Sbjct: 293 LGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDM 352
Query: 121 IDRFDLNGDGVLSFEEFRIMM 141
I+ D +GDG + F EF MM
Sbjct: 353 INEVDADGDGTIDFPEFLTMM 373
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 72.8 bits (177), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 82/141 (58%), Gaps = 10/141 (7%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DG+G +D +
Sbjct: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSL--GQNPTEAELQDMINEVDADGNGTIDFPEF 69
Query: 66 VGLI----EGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMI 121
+ L+ + +EE+LK EAF ++D D GFIS +L+ ++ LGE + +E MI
Sbjct: 70 LNLMARKMKDTDSEEELK---EAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMI 126
Query: 122 DRFDLNGDGVLSFEEF-RIMM 141
D++GDG +++EEF ++MM
Sbjct: 127 READVDGDGQINYEEFVKVMM 147
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
++++ + +EAF L+D D G I+ +L ++ LG++ + E + MI+ D +G+G +
Sbjct: 6 TDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 134 FEEFRIMM 141
F EF +M
Sbjct: 66 FPEFLNLM 73
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 72.8 bits (177), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 78/137 (56%), Gaps = 3/137 (2%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DGDG +D +
Sbjct: 311 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGDGTIDFPEF 368
Query: 66 VGLI-EGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRF 124
+ ++ + +++REAF ++D D G+IS +L+ ++ LGE + +E MI
Sbjct: 369 LTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA 428
Query: 125 DLNGDGVLSFEEFRIMM 141
D++GDG +++EEF MM
Sbjct: 429 DIDGDGQVNYEEFVQMM 445
Score = 55.8 bits (133), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 74/141 (52%), Gaps = 11/141 (7%)
Query: 1 MVKGREYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFL 60
M +G ER ++F ++G+ K +E+K GD L+N +E ++ +D DG +
Sbjct: 243 MPEGYIQERT-IFFKDDGNYKTR-AEVKFE-------GDTLVNRIE--LKGIDFKEDGNI 291
Query: 61 DLEDLVGLIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMM 120
L + EE++ + +EAF L+D D G I+ +L ++ LG++ + E + M
Sbjct: 292 LGHKLEYNLPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDM 351
Query: 121 IDRFDLNGDGVLSFEEFRIMM 141
I+ D +GDG + F EF MM
Sbjct: 352 INEVDADGDGTIDFPEFLTMM 372
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 72.4 bits (176), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 82/141 (58%), Gaps = 10/141 (7%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DG+G +D +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 66 VGLI----EGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMI 121
+ L+ + +EE+LK EAF ++D D GFIS +L+ ++ LGE + +E MI
Sbjct: 69 LNLMARKMKDTDSEEELK---EAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 125
Query: 122 DRFDLNGDGVLSFEEF-RIMM 141
D++GDG +++EEF ++MM
Sbjct: 126 READVDGDGQVNYEEFVQVMM 146
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
+E++ + +EAF L+D D G I+ +L ++ LG++ + E + MI+ D +G+G +
Sbjct: 5 TDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 134 FEEFRIMM 141
F EF +M
Sbjct: 65 FPEFLNLM 72
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 72.4 bits (176), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 82/141 (58%), Gaps = 10/141 (7%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DG+G +D +
Sbjct: 8 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGNGTIDFPEF 65
Query: 66 VGLI----EGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMI 121
+ L+ + +EE+LK EAF ++D D GFIS +L+ ++ LGE + +E MI
Sbjct: 66 LNLMARKMKDTDSEEELK---EAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMI 122
Query: 122 DRFDLNGDGVLSFEEF-RIMM 141
D++GDG +++EEF ++MM
Sbjct: 123 READVDGDGQVNYEEFVQVMM 143
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
+E++ + +EAF L+D D G I+ +L ++ LG++ + E + MI+ D +G+G +
Sbjct: 2 TDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 61
Query: 134 FEEFRIMM 141
F EF +M
Sbjct: 62 FPEFLNLM 69
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 79/142 (55%), Gaps = 13/142 (9%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DG+G +D +
Sbjct: 313 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGNGTIDFPEF 370
Query: 66 VGLIEGASAEEKLKD------LREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRM 119
+ ++ K+KD +REAF ++D D G+IS +L+ ++ LGE + +E
Sbjct: 371 LTMMA-----RKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 425
Query: 120 MIDRFDLNGDGVLSFEEFRIMM 141
MI D++GDG +++EEF MM
Sbjct: 426 MIREADIDGDGQVNYEEFVQMM 447
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 73/141 (51%), Gaps = 11/141 (7%)
Query: 1 MVKGREYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFL 60
M +G ER ++F ++G+ K +E+K GD L+N +E ++ +D DG +
Sbjct: 245 MPEGYIQERT-IFFKDDGNYKTR-AEVKFE-------GDTLVNRIE--LKGIDFKEDGNI 293
Query: 61 DLEDLVGLIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMM 120
L EE++ + +EAF L+D D G I+ +L ++ LG++ + E + M
Sbjct: 294 LGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDM 353
Query: 121 IDRFDLNGDGVLSFEEFRIMM 141
I+ D +G+G + F EF MM
Sbjct: 354 INEVDADGNGTIDFPEFLTMM 374
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 79/142 (55%), Gaps = 13/142 (9%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DG+G +D +
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGNGTIDFPEF 369
Query: 66 VGLIEGASAEEKLKD------LREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRM 119
+ ++ K+KD +REAF ++D D G+IS +L+ ++ LGE + +E
Sbjct: 370 LTMMA-----RKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 424
Query: 120 MIDRFDLNGDGVLSFEEFRIMM 141
MI D++GDG +++EEF MM
Sbjct: 425 MIREADIDGDGQVNYEEFVQMM 446
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 73/141 (51%), Gaps = 11/141 (7%)
Query: 1 MVKGREYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFL 60
M +G ER ++F ++G+ K +E+K GD L+N +E ++ +D DG +
Sbjct: 244 MPEGYIQERT-IFFKDDGNYKTR-AEVKFE-------GDTLVNRIE--LKGIDFKEDGNI 292
Query: 61 DLEDLVGLIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMM 120
L EE++ + +EAF L+D D G I+ +L ++ LG++ + E + M
Sbjct: 293 LGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDM 352
Query: 121 IDRFDLNGDGVLSFEEFRIMM 141
I+ D +G+G + F EF MM
Sbjct: 353 INEVDADGNGTIDFPEFLTMM 373
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 79/142 (55%), Gaps = 13/142 (9%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DG+G +D +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 66 VGLIEGASAEEKLKD------LREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRM 119
+ ++ K+KD +REAF ++D D G+IS +L+ ++ LGE + +E
Sbjct: 69 LTMMA-----RKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 123
Query: 120 MIDRFDLNGDGVLSFEEFRIMM 141
MI D++GDG +++EEF MM
Sbjct: 124 MIREADIDGDGQVNYEEFVQMM 145
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE++ + +EAF L+D D G I+ +L ++ LG++ + E + MI+ D +G+G +
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 134 FEEFRIMM 141
F EF MM
Sbjct: 65 FPEFLTMM 72
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 79/142 (55%), Gaps = 13/142 (9%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DG+G +D +
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGNGTIDFPEF 69
Query: 66 VGLIEGASAEEKLKD------LREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRM 119
+ ++ K+KD +REAF ++D D G+IS +L+ ++ LGE + +E
Sbjct: 70 LTMMA-----RKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 124
Query: 120 MIDRFDLNGDGVLSFEEFRIMM 141
MI D++GDG +++EEF MM
Sbjct: 125 MIREADIDGDGQVNYEEFVQMM 146
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE++ + +EAF L+D D G I+ +L ++ LG++ + E + MI+ D +G+G +
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 134 FEEFRIMM 141
F EF MM
Sbjct: 66 FPEFLTMM 73
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 79/142 (55%), Gaps = 13/142 (9%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DG+G +D +
Sbjct: 275 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGNGTIDFPEF 332
Query: 66 VGLIEGASAEEKLKD------LREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRM 119
+ ++ K+KD +REAF ++D D G+IS +L+ ++ LGE + +E
Sbjct: 333 LTMMA-----RKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 387
Query: 120 MIDRFDLNGDGVLSFEEFRIMM 141
MI D++GDG +++EEF MM
Sbjct: 388 MIREADIDGDGQVNYEEFVQMM 409
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 73/141 (51%), Gaps = 11/141 (7%)
Query: 1 MVKGREYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFL 60
M +G ER ++F ++G+ K +E+K GD L+N +E ++ +D DG +
Sbjct: 207 MPEGYIQERT-IFFKDDGNYKTR-AEVKFE-------GDTLVNRIE--LKGIDFKEDGNI 255
Query: 61 DLEDLVGLIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMM 120
L EE++ + +EAF L+D D G I+ +L ++ LG++ + E + M
Sbjct: 256 LGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDM 315
Query: 121 IDRFDLNGDGVLSFEEFRIMM 141
I+ D +G+G + F EF MM
Sbjct: 316 INEVDADGNGTIDFPEFLTMM 336
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 79/142 (55%), Gaps = 13/142 (9%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DG+G +D +
Sbjct: 15 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGNGTIDFPEF 72
Query: 66 VGLIEGASAEEKLKD------LREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRM 119
+ ++ K+KD +REAF ++D D G+IS +L+ ++ LGE + +E
Sbjct: 73 LTMMA-----RKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 127
Query: 120 MIDRFDLNGDGVLSFEEFRIMM 141
MI D++GDG +++EEF MM
Sbjct: 128 MIREADIDGDGQVNYEEFVQMM 149
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE++ + +EAF L+D D G I+ +L ++ LG++ + E + MI+ D +G+G +
Sbjct: 9 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 68
Query: 134 FEEFRIMM 141
F EF MM
Sbjct: 69 FPEFLTMM 76
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 79/142 (55%), Gaps = 13/142 (9%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DG+G +D +
Sbjct: 13 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGNGTIDFPEF 70
Query: 66 VGLIEGASAEEKLKD------LREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRM 119
+ ++ K+KD +REAF ++D D G+IS +L+ ++ LGE + +E
Sbjct: 71 LTMMA-----RKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 125
Query: 120 MIDRFDLNGDGVLSFEEFRIMM 141
MI D++GDG +++EEF MM
Sbjct: 126 MIREADIDGDGQVNYEEFVQMM 147
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE++ + +EAF L+D D G I+ +L ++ LG++ + E + MI+ D +G+G +
Sbjct: 7 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 66
Query: 134 FEEFRIMM 141
F EF MM
Sbjct: 67 FPEFLTMM 74
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 79/142 (55%), Gaps = 13/142 (9%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DG+G +D +
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGNGTIDFPEF 369
Query: 66 VGLIEGASAEEKLKD------LREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRM 119
+ ++ K+KD +REAF ++D D G+IS +L+ ++ LGE + +E
Sbjct: 370 LTMMA-----RKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 424
Query: 120 MIDRFDLNGDGVLSFEEFRIMM 141
MI D++GDG +++EEF MM
Sbjct: 425 MIREADIDGDGQVNYEEFVQMM 446
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 73/141 (51%), Gaps = 11/141 (7%)
Query: 1 MVKGREYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFL 60
M +G ER ++F ++G+ K +E+K GD L+N +E ++ +D DG +
Sbjct: 244 MPEGYIQERT-IFFKDDGNYKTR-AEVKFE-------GDTLVNRIE--LKGIDFKEDGNI 292
Query: 61 DLEDLVGLIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMM 120
L EE++ + +EAF L+D D G I+ +L ++ LG++ + E + M
Sbjct: 293 LGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDM 352
Query: 121 IDRFDLNGDGVLSFEEFRIMM 141
I+ D +G+G + F EF MM
Sbjct: 353 INEVDADGNGTIDFPEFLTMM 373
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 79/142 (55%), Gaps = 13/142 (9%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DG+G +D +
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGNGTIDFPEF 66
Query: 66 VGLIEGASAEEKLKD------LREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRM 119
+ ++ K+KD +REAF ++D D G+IS +L+ ++ LGE + +E
Sbjct: 67 LTMMA-----RKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 121
Query: 120 MIDRFDLNGDGVLSFEEFRIMM 141
MI D++GDG +++EEF MM
Sbjct: 122 MIREADIDGDGQVNYEEFVQMM 143
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE++ + +EAF L+D D G I+ +L ++ LG++ + E + MI+ D +G+G +
Sbjct: 3 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 62
Query: 134 FEEFRIMM 141
F EF MM
Sbjct: 63 FPEFLTMM 70
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 79/142 (55%), Gaps = 13/142 (9%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DG+G +D +
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGNGTIDFPEF 66
Query: 66 VGLIEGASAEEKLKD------LREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRM 119
+ ++ K+KD +REAF ++D D G+IS +L+ ++ LGE + +E
Sbjct: 67 LTMMA-----RKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 121
Query: 120 MIDRFDLNGDGVLSFEEFRIMM 141
MI D++GDG +++EEF MM
Sbjct: 122 MIREADIDGDGQVNYEEFVQMM 143
Score = 52.4 bits (124), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 43/70 (61%)
Query: 72 ASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGV 131
A+ EE++ + +EAF L+D D G I+ +L ++ LG++ + E + MI+ D +G+G
Sbjct: 1 AATEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 60
Query: 132 LSFEEFRIMM 141
+ F EF MM
Sbjct: 61 IDFPEFLTMM 70
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 79/142 (55%), Gaps = 13/142 (9%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DG+G +D +
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGNGTIDFPEF 69
Query: 66 VGLIEGASAEEKLKD------LREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRM 119
+ ++ K+KD +REAF ++D D G+IS +L+ ++ LGE + +E
Sbjct: 70 LTMMA-----RKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 124
Query: 120 MIDRFDLNGDGVLSFEEFRIMM 141
MI D++GDG +++EEF MM
Sbjct: 125 MIREADIDGDGQVNYEEFVQMM 146
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE++ + +EAF L+D D G I+ +L ++ LG++ + E + MI+ D +G+G +
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 134 FEEFRIMM 141
F EF MM
Sbjct: 66 FPEFLTMM 73
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 79/142 (55%), Gaps = 13/142 (9%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DG+G +D +
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGNGTIDFPEF 69
Query: 66 VGLIEGASAEEKLKD------LREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRM 119
+ ++ K+KD +REAF ++D D G+IS +L+ ++ LGE + +E
Sbjct: 70 LTMMA-----RKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDE 124
Query: 120 MIDRFDLNGDGVLSFEEFRIMM 141
MI D++GDG +++EEF MM
Sbjct: 125 MIREADIDGDGQVNYEEFVQMM 146
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE++ + +EAF L+D D G I+ +L ++ LG++ + E + MI+ D +G+G +
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 134 FEEFRIMM 141
F EF MM
Sbjct: 66 FPEFLTMM 73
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 79/142 (55%), Gaps = 13/142 (9%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DG+G +D +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 66 VGLIEGASAEEKLKD------LREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRM 119
+ ++ K+KD +REAF ++D D G+IS +L+ ++ LGE + +E
Sbjct: 69 LTMMA-----RKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDE 123
Query: 120 MIDRFDLNGDGVLSFEEFRIMM 141
MI D++GDG +++EEF MM
Sbjct: 124 MIREADIDGDGQVNYEEFVQMM 145
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE++ + +EAF L+D D G I+ +L ++ LG++ + E + MI+ D +G+G +
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 134 FEEFRIMM 141
F EF MM
Sbjct: 65 FPEFLTMM 72
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 79/142 (55%), Gaps = 13/142 (9%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DG+G +D +
Sbjct: 17 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGNGTIDFPEF 74
Query: 66 VGLIEGASAEEKLKD------LREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRM 119
+ ++ K+KD +REAF ++D D G+IS +L+ ++ LGE + +E
Sbjct: 75 LTMMA-----RKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 129
Query: 120 MIDRFDLNGDGVLSFEEFRIMM 141
MI D++GDG +++EEF MM
Sbjct: 130 MIREADIDGDGQVNYEEFVQMM 151
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE++ + +EAF L+D D G I+ +L ++ LG++ + E + MI+ D +G+G +
Sbjct: 11 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 70
Query: 134 FEEFRIMM 141
F EF MM
Sbjct: 71 FPEFLTMM 78
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 79/142 (55%), Gaps = 13/142 (9%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DG+G +D +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 66 VGLIEGASAEEKLKD------LREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRM 119
+ ++ K+KD +REAF ++D D G+IS +L+ ++ LGE + +E
Sbjct: 69 LTMMA-----RKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 123
Query: 120 MIDRFDLNGDGVLSFEEFRIMM 141
MI D++GDG +++EEF MM
Sbjct: 124 MIREADIDGDGQVNYEEFVQMM 145
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE++ + +EAF L+D D G I+ +L ++ LG++ + E + MI+ D +G+G +
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 134 FEEFRIMM 141
F EF MM
Sbjct: 65 FPEFLTMM 72
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 79/142 (55%), Gaps = 13/142 (9%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DG+G +D +
Sbjct: 8 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGNGTIDFPEF 65
Query: 66 VGLIEGASAEEKLKD------LREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRM 119
+ ++ K+KD +REAF ++D D G+IS +L+ ++ LGE + +E
Sbjct: 66 LTMMA-----RKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 120
Query: 120 MIDRFDLNGDGVLSFEEFRIMM 141
MI D++GDG +++EEF MM
Sbjct: 121 MIREADIDGDGQVNYEEFVQMM 142
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE++ + +EAF L+D D G I+ +L ++ LG++ + E + MI+ D +G+G +
Sbjct: 2 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 61
Query: 134 FEEFRIMM 141
F EF MM
Sbjct: 62 FPEFLTMM 69
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 79/142 (55%), Gaps = 13/142 (9%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DG+G +D +
Sbjct: 7 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGNGTIDFPEF 64
Query: 66 VGLIEGASAEEKLKD------LREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRM 119
+ ++ K+KD +REAF ++D D G+IS +L+ ++ LGE + +E
Sbjct: 65 LTMMA-----RKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 119
Query: 120 MIDRFDLNGDGVLSFEEFRIMM 141
MI D++GDG +++EEF MM
Sbjct: 120 MIREADIDGDGQVNYEEFVQMM 141
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE++ + +EAF L+D D G I+ +L ++ LG++ + E + MI+ D +G+G +
Sbjct: 1 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 60
Query: 134 FEEFRIMM 141
F EF MM
Sbjct: 61 FPEFLTMM 68
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 79/142 (55%), Gaps = 13/142 (9%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DG+G +D +
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGNGTIDFPEF 69
Query: 66 VGLIEGASAEEKLKD------LREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRM 119
+ ++ K+KD +REAF ++D D G+IS +L+ ++ LGE + +E
Sbjct: 70 LTMMA-----RKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 124
Query: 120 MIDRFDLNGDGVLSFEEFRIMM 141
MI D++GDG +++EEF MM
Sbjct: 125 MIREADIDGDGQVNYEEFVQMM 146
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE++ + +EAF L+D D G I+ +L ++ LG++ + E + MI+ D +G+G +
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 134 FEEFRIMM 141
F EF MM
Sbjct: 66 FPEFLTMM 73
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 79/142 (55%), Gaps = 13/142 (9%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DG+G +D +
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGNGTIDFPEF 69
Query: 66 VGLIEGASAEEKLKD------LREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRM 119
+ ++ K+KD +REAF ++D D G+IS +L+ ++ LGE + +E
Sbjct: 70 LTMMA-----RKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 124
Query: 120 MIDRFDLNGDGVLSFEEFRIMM 141
MI D++GDG +++EEF MM
Sbjct: 125 MIREADIDGDGQVNYEEFVQMM 146
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE++ + +EAF L+D D G I+ +L ++ LG++ + E + MI+ D +G+G +
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 134 FEEFRIMM 141
F EF MM
Sbjct: 66 FPEFLTMM 73
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 79/142 (55%), Gaps = 13/142 (9%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DG+G +D +
Sbjct: 278 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGNGTIDFPEF 335
Query: 66 VGLIEGASAEEKLKD------LREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRM 119
+ ++ K+KD +REAF ++D D G+IS +L+ ++ LGE + +E
Sbjct: 336 LTMMA-----RKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 390
Query: 120 MIDRFDLNGDGVLSFEEFRIMM 141
MI D++GDG +++EEF MM
Sbjct: 391 MIREADIDGDGQVNYEEFVQMM 412
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 74/146 (50%), Gaps = 21/146 (14%)
Query: 1 MVKGREYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFL 60
M +G ER ++F ++G+ K +E+K GD L+N +E+ G GF
Sbjct: 210 MPEGYVQERT-IFFKDDGNYKTR-AEVKFE-------GDTLVNRIELK-------GIGFK 253
Query: 61 DLEDLVGL-----IEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSID 115
+ +++G EE++ + +EAF L+D D G I+ +L ++ LG++ +
Sbjct: 254 EDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA 313
Query: 116 ECRMMIDRFDLNGDGVLSFEEFRIMM 141
E + MI+ D +G+G + F EF MM
Sbjct: 314 ELQDMINEVDADGNGTIDFPEFLTMM 339
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 79/142 (55%), Gaps = 13/142 (9%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DG+G +D +
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGNGTIDFPEF 66
Query: 66 VGLIEGASAEEKLKD------LREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRM 119
+ ++ K+KD +REAF ++D D G+IS +L+ ++ LGE + +E
Sbjct: 67 LTMMA-----RKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 121
Query: 120 MIDRFDLNGDGVLSFEEFRIMM 141
MI D++GDG +++EEF MM
Sbjct: 122 MIREADIDGDGQVNYEEFVQMM 143
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE++ + +EAF L+D D G I+ +L ++ LG++ + E + MI+ D +G+G +
Sbjct: 3 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 62
Query: 134 FEEFRIMM 141
F EF MM
Sbjct: 63 FPEFLTMM 70
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 79/142 (55%), Gaps = 13/142 (9%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DG+G +D +
Sbjct: 278 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGNGTIDFPEF 335
Query: 66 VGLIEGASAEEKLKD------LREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRM 119
+ ++ K+KD +REAF ++D D G+IS +L+ ++ LGE + +E
Sbjct: 336 LTMMA-----RKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 390
Query: 120 MIDRFDLNGDGVLSFEEFRIMM 141
MI D++GDG +++EEF MM
Sbjct: 391 MIREADIDGDGQVNYEEFVQMM 412
Score = 52.4 bits (124), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 77/146 (52%), Gaps = 21/146 (14%)
Query: 1 MVKGREYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFL 60
M +G ER ++F ++G+ K +E+K GD L+N +E+ G GF
Sbjct: 210 MPEGYVQERT-IFFKDDGNYKTR-AEVKFE-------GDTLVNRIELK-------GIGFK 253
Query: 61 DLEDLVGL-IEGAS----AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSID 115
+ +++G +E S EE++ + +EAF L+D D G I+ +L ++ LG++ +
Sbjct: 254 EDGNILGHKLEYNSRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA 313
Query: 116 ECRMMIDRFDLNGDGVLSFEEFRIMM 141
E + MI+ D +G+G + F EF MM
Sbjct: 314 ELQDMINEVDADGNGTIDFPEFLTMM 339
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 79/142 (55%), Gaps = 13/142 (9%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DG+G +D +
Sbjct: 10 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGNGTIDFPEF 67
Query: 66 VGLIEGASAEEKLKD------LREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRM 119
+ ++ K+KD +REAF ++D D G+IS +L+ ++ LGE + +E
Sbjct: 68 LTMMA-----RKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 122
Query: 120 MIDRFDLNGDGVLSFEEFRIMM 141
MI D++GDG +++EEF MM
Sbjct: 123 MIREADIDGDGQVNYEEFVQMM 144
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE++ + +EAF L+D D G I+ +L ++ LG++ + E + MI+ D +G+G +
Sbjct: 4 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 63
Query: 134 FEEFRIMM 141
F EF MM
Sbjct: 64 FPEFLTMM 71
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 80/140 (57%), Gaps = 9/140 (6%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DG+G +D +
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGNGTIDFPEF 369
Query: 66 VGLI----EGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMI 121
+ ++ + +EE ++REAF ++D D G+IS +L+ ++ LGE + +E MI
Sbjct: 370 LTMMARWMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 426
Query: 122 DRFDLNGDGVLSFEEFRIMM 141
D++GDG +++EEF MM
Sbjct: 427 READIDGDGQVNYEEFVQMM 446
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 73/141 (51%), Gaps = 11/141 (7%)
Query: 1 MVKGREYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFL 60
M +G ER ++F ++G+ K +E+K GD L+N +E ++ +D DG +
Sbjct: 244 MPEGYIQERT-IFFKDDGNYKTR-AEVKFE-------GDTLVNRIE--LKGIDFKEDGNI 292
Query: 61 DLEDLVGLIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMM 120
L EE++ + +EAF L+D D G I+ +L ++ LG++ + E + M
Sbjct: 293 LGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDM 352
Query: 121 IDRFDLNGDGVLSFEEFRIMM 141
I+ D +G+G + F EF MM
Sbjct: 353 INEVDADGNGTIDFPEFLTMM 373
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 78/137 (56%), Gaps = 3/137 (2%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DG+G +D +
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGNGTIDFPEF 369
Query: 66 VGLI-EGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRF 124
+ ++ + +++REAF ++D D G+IS +L+ ++ LGE + +E MI
Sbjct: 370 LTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA 429
Query: 125 DLNGDGVLSFEEFRIMM 141
D++GDG +++EEF MM
Sbjct: 430 DIDGDGQVNYEEFVQMM 446
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 73/141 (51%), Gaps = 11/141 (7%)
Query: 1 MVKGREYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFL 60
M +G ER ++F ++G+ K +E+K GD L+N +E ++ +D DG +
Sbjct: 244 MPEGYIQERT-IFFKDDGNYKTR-AEVKFE-------GDTLVNRIE--LKGIDFKEDGNI 292
Query: 61 DLEDLVGLIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMM 120
L EE++ + +EAF L+D D G I+ +L ++ LG++ + E + M
Sbjct: 293 LGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDM 352
Query: 121 IDRFDLNGDGVLSFEEFRIMM 141
I+ D +G+G + F EF MM
Sbjct: 353 INEVDADGNGTIDFPEFLTMM 373
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 82/141 (58%), Gaps = 10/141 (7%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DG+G +D +
Sbjct: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSL--GQNPTEAELQDMINEVDADGNGTIDFPEF 69
Query: 66 VGLI----EGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMI 121
+ L+ + +EE+LK EAF ++D D GFIS +L+ ++ LGE + +E MI
Sbjct: 70 LNLMARKMKDTDSEEELK---EAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMI 126
Query: 122 DRFDLNGDGVLSFEEF-RIMM 141
D++GDG ++++EF ++MM
Sbjct: 127 READVDGDGQINYDEFVKVMM 147
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
E+++ + +EAF L+D D G I+ +L ++ LG++ + E + MI+ D +G+G +
Sbjct: 6 TEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 134 FEEFRIMM 141
F EF +M
Sbjct: 66 FPEFLNLM 73
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 70.5 bits (171), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 78/138 (56%), Gaps = 13/138 (9%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E+ + +D+DG+G +D +
Sbjct: 11 EFKEAFSLFDKDGDGCITTRELGTVMRSL--GQNPTEAELRDMMSEIDRDGNGTVDFPEF 68
Query: 66 VGLIEGASAEEKLKD------LREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRM 119
+G++ K+KD +REAF ++D D GF+S +L+ ++ +LGE S +E
Sbjct: 69 LGMMA-----RKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDE 123
Query: 120 MIDRFDLNGDGVLSFEEF 137
MI D +GDG +++EEF
Sbjct: 124 MIRAADTDGDGQVNYEEF 141
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE++ + +EAF L+D D G I+ +L ++ LG++ + E R M+ D +G+G +
Sbjct: 5 TEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVD 64
Query: 134 FEEFRIMM 141
F EF MM
Sbjct: 65 FPEFLGMM 72
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 70.5 bits (171), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 79/142 (55%), Gaps = 13/142 (9%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DG+G +D +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 66 VGLIEGASAEEKLKD------LREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRM 119
+ ++ K+KD +REAF ++D D G+IS +L+ ++ LGE + +E
Sbjct: 69 LTMMA-----RKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 123
Query: 120 MIDRFDLNGDGVLSFEEFRIMM 141
MI +++GDG +++EEF MM
Sbjct: 124 MIREANIDGDGQVNYEEFVQMM 145
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE++ + +EAF L+D D G I+ +L ++ LG++ + E + MI+ D +G+G +
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 134 FEEFRIMM 141
F EF MM
Sbjct: 65 FPEFLTMM 72
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 69.7 bits (169), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 81/142 (57%), Gaps = 13/142 (9%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVA--IESLDKDGDGFLDLE 63
+++ F FD++GDG ++ E + ++ D E E+ I +D DG+G ++ +
Sbjct: 11 DFKEAFGLFDKDGDGCITVEE----LATVIRSLDQNPTEEELQDMISEVDADGNGTIEFD 66
Query: 64 DLVGL----IEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRM 119
+ + L ++ AEE+LK EAF ++D D G+IS ++L+ ++ LGE + +E
Sbjct: 67 EFLSLMAKKVKDTDAEEELK---EAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQ 123
Query: 120 MIDRFDLNGDGVLSFEEFRIMM 141
MI DL+GDG +++EEF MM
Sbjct: 124 MIKEADLDGDGQVNYEEFVKMM 145
Score = 49.3 bits (116), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 43/68 (63%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
+EE++ D +EAFGL+D D G I+ +L ++ L ++ + +E + MI D +G+G +
Sbjct: 5 SEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIE 64
Query: 134 FEEFRIMM 141
F+EF +M
Sbjct: 65 FDEFLSLM 72
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 69.7 bits (169), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 77/137 (56%), Gaps = 3/137 (2%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ FV FD+ G GK++ E+ M + G + E++ I + + +G L+ +
Sbjct: 11 EFKDAFVQFDKEGTGKIATRELGTLMRTL--GQNPTEAELQDLIAEAENNNNGQLNFTEF 68
Query: 66 VGLIEGASAEEKLKD-LREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRF 124
G++ E ++ +REAF ++D D GFISP +L+ ++ LGE + +E MI
Sbjct: 69 CGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREA 128
Query: 125 DLNGDGVLSFEEFRIMM 141
D +GDG++++EEF M+
Sbjct: 129 DFDGDGMINYEEFVWMI 145
Score = 34.7 bits (78), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 37/64 (57%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE++ + ++AF +D + G I+ +L ++ LG++ + E + +I + N +G L+
Sbjct: 5 TEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLN 64
Query: 134 FEEF 137
F EF
Sbjct: 65 FTEF 68
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 67.4 bits (163), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 78/138 (56%), Gaps = 4/138 (2%)
Query: 5 REYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLED 64
+E F FD +G G + E+K + M G + E++ I +DKDG G +D E+
Sbjct: 8 QEIREAFDLFDTDGSGTIDAKELK--VAMRALGFEPKKEEIKKMIADIDKDGSGTIDFEE 65
Query: 65 LVGLIEGASAE-EKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDR 123
+ ++ E + +++ +AF L+D D G IS +LKR+ +LGE+ + +E + MID
Sbjct: 66 FLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQEMIDE 125
Query: 124 FDLNGDGVLSFEE-FRIM 140
D +GDG ++ EE FRIM
Sbjct: 126 ADRDGDGEVNEEEFFRIM 143
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 38/68 (55%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE+ +++REAF L+D D G I +LK + LG +E + MI D +G G +
Sbjct: 3 TEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTID 62
Query: 134 FEEFRIMM 141
FEEF MM
Sbjct: 63 FEEFLQMM 70
Score = 26.2 bits (56), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 9 RVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDLVGL 68
+ F FD++ GK+S +K + G ++ E++ I+ D+DGDG ++ E+ +
Sbjct: 85 KAFRLFDDDETGKISFKNLKRVAKEL--GENMTDEELQEMIDEADRDGDGEVNEEEFFRI 142
Query: 69 IEGAS 73
++ S
Sbjct: 143 MKKTS 147
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 75/143 (52%), Gaps = 10/143 (6%)
Query: 3 KGREYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDL 62
+ +E F FD +G G + E+K + M G + E++ I +DKDG G +D
Sbjct: 26 QKQEIREAFDLFDTDGSGTIDAKELK--VAMRALGFEPKKEEIKKMISEIDKDGSGTIDF 83
Query: 63 EDLVGLIEGASAEEKLKDLRE----AFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECR 118
E+ + ++ E +D RE AF L+D DN G I+ DL+R+ +LGE+ + +E +
Sbjct: 84 EEFLTMMTAKMGE---RDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQ 140
Query: 119 MMIDRFDLNGDGVLSFEEF-RIM 140
MI D N D + +EF RIM
Sbjct: 141 EMIAEADRNDDNEIDEDEFIRIM 163
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 38/68 (55%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE+ +++REAF L+D D G I +LK + LG +E + MI D +G G +
Sbjct: 23 TEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTID 82
Query: 134 FEEFRIMM 141
FEEF MM
Sbjct: 83 FEEFLTMM 90
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 63.2 bits (152), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 78/138 (56%), Gaps = 4/138 (2%)
Query: 5 REYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLED 64
+E F FD +G G + E+K + M G + E++ I +DK+G G ++ D
Sbjct: 6 QEIREAFDLFDADGTGTIDVKELK--VAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGD 63
Query: 65 LVGLIEGASAEEKLKD-LREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDR 123
+ ++ +E+ K+ + +AF L+D D G IS +LKR+ +LGE+ + +E + MID
Sbjct: 64 FLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDE 123
Query: 124 FDLNGDGVLSFEEF-RIM 140
D +GDG +S +EF RIM
Sbjct: 124 ADRDGDGEVSEQEFLRIM 141
Score = 42.4 bits (98), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE+ +++REAF L+D D G I +LK + LG +E + MI D G G ++
Sbjct: 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMN 60
Query: 134 FEEFRIMM 141
F +F +M
Sbjct: 61 FGDFLTVM 68
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 63.2 bits (152), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 71/133 (53%), Gaps = 3/133 (2%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLED- 64
E++ F FD++GDG ++ E+ + G + E++ I +D DG+G +D +
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVXRSL--GQNPTEAELQDXINEVDADGNGTIDFPEF 69
Query: 65 LVGLIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRF 124
L + +++REAF ++D D G+IS +L+ + LGE + +E I
Sbjct: 70 LTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREA 129
Query: 125 DLNGDGVLSFEEF 137
D++GDG +++EEF
Sbjct: 130 DIDGDGQVNYEEF 142
Score = 43.1 bits (100), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE++ + +EAF L+D D G I+ +L + LG++ + E + I+ D +G+G +
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTID 65
Query: 134 FEEF 137
F EF
Sbjct: 66 FPEF 69
Score = 29.3 bits (64), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E F FD++G+G +S +E+++ + G + EV+ I D DGDG ++ E+
Sbjct: 85 EIREAFRVFDKDGNGYISAAELRHVXTNL--GEKLTDEEVDQXIREADIDGDGQVNYEEF 142
Query: 66 V 66
V
Sbjct: 143 V 143
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 71/133 (53%), Gaps = 3/133 (2%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLED- 64
E++ F FD++GDG ++ E+ + G + E++ I +D DG+G +D +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVXRSL--GQNPTEAELQDXINEVDADGNGTIDFPEF 68
Query: 65 LVGLIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRF 124
L + +++REAF ++D D G+IS +L+ + LGE + +E I
Sbjct: 69 LTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREA 128
Query: 125 DLNGDGVLSFEEF 137
D++GDG +++EEF
Sbjct: 129 DIDGDGQVNYEEF 141
Score = 43.1 bits (100), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE++ + +EAF L+D D G I+ +L + LG++ + E + I+ D +G+G +
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTID 64
Query: 134 FEEF 137
F EF
Sbjct: 65 FPEF 68
Score = 28.9 bits (63), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E F FD++G+G +S +E+++ + G + EV+ I D DGDG ++ E+
Sbjct: 84 EIREAFRVFDKDGNGYISAAELRHVXTNL--GEKLTDEEVDEXIREADIDGDGQVNYEEF 141
Query: 66 V 66
V
Sbjct: 142 V 142
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 74/142 (52%), Gaps = 13/142 (9%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ ++ M + G + E++ I + DG+G +D
Sbjct: 312 EFKEAFSLFDKDGDGGITTKQLGTVMRSL--GQNPTEAELQDMINEVGADGNGTIDFPQF 369
Query: 66 VGLIEGASAEEKLKD------LREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRM 119
+ ++ K+KD +REAF ++ D G+IS L+ ++ LGE + +E
Sbjct: 370 LTMMA-----RKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVDE 424
Query: 120 MIDRFDLNGDGVLSFEEFRIMM 141
MI ++GDG +++E+F MM
Sbjct: 425 MIREAGIDGDGQVNYEQFVQMM 446
Score = 48.9 bits (115), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 71/141 (50%), Gaps = 11/141 (7%)
Query: 1 MVKGREYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFL 60
M +G ER ++F ++G+ K +E+K GD L+N +E ++ +D DG +
Sbjct: 244 MPEGYIQERT-IFFKDDGNYKTR-AEVKFE-------GDTLVNRIE--LKGIDFKEDGNI 292
Query: 61 DLEDLVGLIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMM 120
L EE++ + +EAF L+D D G I+ L ++ LG++ + E + M
Sbjct: 293 LGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDM 352
Query: 121 IDRFDLNGDGVLSFEEFRIMM 141
I+ +G+G + F +F MM
Sbjct: 353 INEVGADGNGTIDFPQFLTMM 373
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 60.1 bits (144), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 71/133 (53%), Gaps = 3/133 (2%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLED- 64
E++ F FD++GDG ++ E+ + G + E++ I +D DG+G ++ +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVXRSL--GCNPTEAELQDXINEVDADGNGTINFPEF 68
Query: 65 LVGLIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRF 124
L + +++REAF ++D D G+IS +L+ + LGE + +E I
Sbjct: 69 LTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREA 128
Query: 125 DLNGDGVLSFEEF 137
D++GDG +++EEF
Sbjct: 129 DIDGDGQVNYEEF 141
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE++ + +EAF L+D D G I+ +L + LG + + E + I+ D +G+G ++
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTIN 64
Query: 134 FEEF 137
F EF
Sbjct: 65 FPEF 68
Score = 29.3 bits (64), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E F FD++G+G +S +E+++ + G + EV+ I D DGDG ++ E+
Sbjct: 84 EIREAFRVFDKDGNGYISAAELRHVXTNL--GEKLTDEEVDEXIREADIDGDGQVNYEEF 141
Query: 66 V 66
V
Sbjct: 142 V 142
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 74/136 (54%), Gaps = 3/136 (2%)
Query: 3 KGREYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDL 62
+ +E F FD N DG + E+K + M G ++ E+ I+ D +G +
Sbjct: 21 QKQEIYEAFSLFDMNNDGFLDYHELK--VAMKALGFELPKREILDLIDEYDSEGRHLMKY 78
Query: 63 EDLVGLI-EGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMI 121
+D ++ E + L +++ AF L+D D+ G IS +L+R+ +LGE+ + +E R MI
Sbjct: 79 DDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMI 138
Query: 122 DRFDLNGDGVLSFEEF 137
+ FDL+GDG ++ EF
Sbjct: 139 EEFDLDGDGEINENEF 154
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%)
Query: 67 GLIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDL 126
G + EE+ +++ EAF L+D +N GF+ ++LK + LG E +ID +D
Sbjct: 11 GPLNSELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDS 70
Query: 127 NGDGVLSFEEFRIMM 141
G ++ +++F I+M
Sbjct: 71 EGRHLMKYDDFYIVM 85
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 56.6 bits (135), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 73/131 (55%), Gaps = 11/131 (8%)
Query: 18 GDGKVSPSEIKNRMGMI--VGGGDVLLNEVEVAIESLDKDGDGFLDLED--LVG---LIE 70
G G+VS +I G+I V G + + I+ D G+G +D + ++G L E
Sbjct: 27 GSGRVSTDQI----GIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGE 82
Query: 71 GASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDG 130
+ E+ ++LREAF LYD + G+IS + ++ +LA+L E+ S ++ MID D +G G
Sbjct: 83 EVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSG 142
Query: 131 VLSFEEFRIMM 141
+ FEEF +M
Sbjct: 143 TVDFEEFMGVM 153
Score = 30.4 bits (67), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 74 AEEKLKDLREAFGLYDFDN---RGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDG 130
+ ++K L AF DF+ G +S + + +L LG ++ R +ID FD G+G
Sbjct: 8 SSNQVKLLETAF--RDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNG 65
Query: 131 VLSFEEFRIM 140
+ F+ F+I+
Sbjct: 66 DIDFDSFKII 75
Score = 26.9 bits (58), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 5 REYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNE-VEVAIESLDKDGDGFLDLE 63
+E F +D+ G+G +S ++ + + + L +E ++ I+ +D DG G +D E
Sbjct: 91 QELREAFRLYDKEGNGYISTDVMREILAEL---DETLSSEDLDAMIDEIDADGSGTVDFE 147
Query: 64 DLVGLIEGA 72
+ +G++ G
Sbjct: 148 EFMGVMTGG 156
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 56.2 bits (134), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 72/141 (51%), Gaps = 6/141 (4%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLED- 64
E++ F FD +G G +S E+ M M+ G E++ IE +D+DG G +D E+
Sbjct: 18 EFKAAFDMFDADGGGDISVKELGTVMRML--GQTPTKEELDAIIEEVDEDGSGTIDFEEF 75
Query: 65 LVGLIEGASAEEKLK---DLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMI 121
LV ++ + K K +L E F ++D + G+I +L + GE + +E ++
Sbjct: 76 LVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLM 135
Query: 122 DRFDLNGDGVLSFEEFRIMMQ 142
D N DG + F+EF MM+
Sbjct: 136 KDGDKNNDGRIDFDEFLKMME 156
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
+EE + + + AF ++D D G IS +L ++ LG++ + +E +I+ D +G G +
Sbjct: 12 SEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTID 71
Query: 134 FEEFRIMM 141
FEEF +MM
Sbjct: 72 FEEFLVMM 79
Score = 29.3 bits (64), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E F FD N DG + E+ G V E+E ++ DK+ DG +D ++
Sbjct: 94 ELAECFRIFDRNADGYIDAEELAEIFR--ASGEHVTDEEIESLMKDGDKNNDGRIDFDEF 151
Query: 66 VGLIEG 71
+ ++EG
Sbjct: 152 LKMMEG 157
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 55.8 bits (133), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 74/141 (52%), Gaps = 6/141 (4%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLED- 64
E++ F FD +G G +S E+ M M+ G + E++ IE +D+DG G +D E+
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRML--GQNPTKEELDAIIEEVDEDGSGTIDFEEF 78
Query: 65 LVGLIEGASAEEKLK---DLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMI 121
LV ++ + K K +L + F ++D + GFI +L +L GE + ++ ++
Sbjct: 79 LVMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLM 138
Query: 122 DRFDLNGDGVLSFEEFRIMMQ 142
D N DG + F+EF MM+
Sbjct: 139 KDSDKNNDGRIDFDEFLKMME 159
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
+EE + + + AF ++D D G IS +L ++ LG++ + +E +I+ D +G G +
Sbjct: 15 SEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTID 74
Query: 134 FEEFRIMM 141
FEEF +MM
Sbjct: 75 FEEFLVMM 82
Score = 28.1 bits (61), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E E F FD+N DG + E+ + G V ++E ++ DK+ DG +D ++
Sbjct: 97 ELEDCFRIFDKNADGFIDIEELGEILR--ATGEHVTEEDIEDLMKDSDKNNDGRIDFDEF 154
Query: 66 VGLIEGAS 73
+ ++EG
Sbjct: 155 LKMMEGVQ 162
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 55.8 bits (133), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%), Gaps = 3/68 (4%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
AEE+LK EAF ++D D G+IS ++L+ ++ LGE + +E MI DL+GDG ++
Sbjct: 2 AEEELK---EAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVN 58
Query: 134 FEEFRIMM 141
+EEF MM
Sbjct: 59 YEEFVKMM 66
Score = 33.9 bits (76), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E + F FD++ +G +S SE+ R MI G + EVE I+ D DGDG ++ E+
Sbjct: 5 ELKEAFKVFDKDQNGYISASEL--RHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEF 62
Query: 66 VGLI 69
V ++
Sbjct: 63 VKMM 66
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 55.5 bits (132), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 74/141 (52%), Gaps = 6/141 (4%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLED- 64
E++ F FD +G G +S E+ M M+ G + E++ IE +D+DG G +D E+
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRML--GQNPTKEELDAIIEEVDEDGSGTIDFEEF 78
Query: 65 LVGLIEGASAEEKLK---DLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMI 121
LV ++ + K K +L + F ++D + GFI +L +L GE + ++ ++
Sbjct: 79 LVMMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLM 138
Query: 122 DRFDLNGDGVLSFEEFRIMMQ 142
D N DG + F+EF MM+
Sbjct: 139 KDSDKNNDGRIDFDEFLKMME 159
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
+EE + + + AF ++D D G IS +L ++ LG++ + +E +I+ D +G G +
Sbjct: 15 SEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTID 74
Query: 134 FEEFRIMM 141
FEEF +MM
Sbjct: 75 FEEFLVMM 82
Score = 26.6 bits (57), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 2 VKGREYERV---FVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDG 58
KG+ E + F FD+N DG + E+ + G V ++E ++ DK+ DG
Sbjct: 90 AKGKSEEELADCFRIFDKNADGFIDIEELGEILR--ATGEHVTEEDIEDLMKDSDKNNDG 147
Query: 59 FLDLEDLVGLIEGAS 73
+D ++ + ++EG
Sbjct: 148 RIDFDEFLKMMEGVQ 162
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%), Gaps = 3/68 (4%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
AEE+LK EAF ++D D G+IS ++L+ ++ LGE + +E MI DL+GDG ++
Sbjct: 7 AEEELK---EAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVN 63
Query: 134 FEEFRIMM 141
+EEF MM
Sbjct: 64 YEEFVKMM 71
Score = 34.7 bits (78), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E + F FD++ +G +S SE+ R MI G + EVE I+ D DGDG ++ E+
Sbjct: 10 ELKEAFKVFDKDQNGYISASEL--RHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEF 67
Query: 66 VGLI 69
V ++
Sbjct: 68 VKMM 71
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 73/141 (51%), Gaps = 6/141 (4%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLED- 64
E++ F FD +G G +S E+ M M+ G + E++ IE +D+DG G +D E+
Sbjct: 18 EFKAAFDMFDADGGGDISTKELGTVMRML--GQNPTKEELDAIIEEVDEDGSGTIDFEEF 75
Query: 65 LVGLIEGASAEEKLK---DLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMI 121
LV ++ + K K +L F ++D + GFI +L +L GE + ++ ++
Sbjct: 76 LVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLM 135
Query: 122 DRFDLNGDGVLSFEEFRIMMQ 142
D N DG + F+EF MM+
Sbjct: 136 KDSDKNNDGRIDFDEFLKMME 156
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
+EE + + + AF ++D D G IS +L ++ LG++ + +E +I+ D +G G +
Sbjct: 12 SEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTID 71
Query: 134 FEEFRIMM 141
FEEF +MM
Sbjct: 72 FEEFLVMM 79
Score = 26.6 bits (57), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E F FD+N DG + E+ + G V ++E ++ DK+ DG +D ++
Sbjct: 94 ELANCFRIFDKNADGFIDIEELGEILR--ATGEHVTEEDIEDLMKDSDKNNDGRIDFDEF 151
Query: 66 VGLIEGAS 73
+ ++EG
Sbjct: 152 LKMMEGVQ 159
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 73/141 (51%), Gaps = 6/141 (4%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLED- 64
E++ F FD +G G +S E+ M M+ G + E++ IE +D+DG G +D E+
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRML--GQNPTKEELDAIIEEVDEDGSGTIDFEEF 78
Query: 65 LVGLIEGASAEEKLK---DLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMI 121
LV ++ + K K +L F ++D + GFI +L +L GE + ++ ++
Sbjct: 79 LVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLM 138
Query: 122 DRFDLNGDGVLSFEEFRIMMQ 142
D N DG + F+EF MM+
Sbjct: 139 KDSDKNNDGRIDFDEFLKMME 159
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
+EE + + + AF ++D D G IS +L ++ LG++ + +E +I+ D +G G +
Sbjct: 15 SEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTID 74
Query: 134 FEEFRIMM 141
FEEF +MM
Sbjct: 75 FEEFLVMM 82
Score = 26.6 bits (57), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E F FD+N DG + E+ + G V ++E ++ DK+ DG +D ++
Sbjct: 97 ELANCFRIFDKNADGFIDIEELGEILR--ATGEHVTEEDIEDLMKDSDKNNDGRIDFDEF 154
Query: 66 VGLIEGAS 73
+ ++EG
Sbjct: 155 LKMMEGVQ 162
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 72/141 (51%), Gaps = 6/141 (4%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLED- 64
E++ F FD +G G +S E+ M M+ G E++ IE +D+DG G +D E+
Sbjct: 18 EFKAAFDMFDADGGGDISVKELGTVMRML--GQTPTKEELDAIIEEVDEDGSGTIDFEEF 75
Query: 65 LVGLIEGASAEEKLK---DLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMI 121
LV ++ + K K +L E F ++D + G+I +L + GE + +E ++
Sbjct: 76 LVMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLM 135
Query: 122 DRFDLNGDGVLSFEEFRIMMQ 142
D N DG + F+EF MM+
Sbjct: 136 KDGDKNNDGRIDFDEFLKMME 156
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
+EE + + + AF ++D D G IS +L ++ LG++ + +E +I+ D +G G +
Sbjct: 12 SEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTID 71
Query: 134 FEEFRIMM 141
FEEF +MM
Sbjct: 72 FEEFLVMM 79
Score = 29.3 bits (64), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E +F FD N DG + E+ G V E+E ++ DK+ DG +D ++
Sbjct: 94 ELAELFRIFDRNADGYIDAEELAEIFR--ASGEHVTDEEIESLMKDGDKNNDGRIDFDEF 151
Query: 66 VGLIEG 71
+ ++EG
Sbjct: 152 LKMMEG 157
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 72/141 (51%), Gaps = 6/141 (4%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLED- 64
E++ F FD +G G +S E+ M M+ G + E++ IE +D+DG G +D E+
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRML--GQNPTKEELDAIIEEVDEDGSGTIDFEEF 78
Query: 65 LVGLIEGASAEEKLK---DLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMI 121
LV ++ + K K +L F ++D + GFI +L +L GE ++ ++
Sbjct: 79 LVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLM 138
Query: 122 DRFDLNGDGVLSFEEFRIMMQ 142
D N DG + F+EF MM+
Sbjct: 139 KDSDKNNDGRIDFDEFLKMME 159
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
+EE + + + AF ++D D G IS +L ++ LG++ + +E +I+ D +G G +
Sbjct: 15 SEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTID 74
Query: 134 FEEFRIMM 141
FEEF +MM
Sbjct: 75 FEEFLVMM 82
Score = 27.3 bits (59), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E F FD+N DG + E+ + G V+ ++E ++ DK+ DG +D ++
Sbjct: 97 ELANCFRIFDKNADGFIDIEELGEILR--ATGEHVIEEDIEDLMKDSDKNNDGRIDFDEF 154
Query: 66 VGLIEGAS 73
+ ++EG
Sbjct: 155 LKMMEGVQ 162
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 40/59 (67%)
Query: 79 KDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLSFEEF 137
++LREAF LYD + G+IS + ++ +LA+L E+ S ++ MID D +G G + FEEF
Sbjct: 3 QELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEF 61
Score = 27.3 bits (59), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 5 REYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNE-VEVAIESLDKDGDGFLDLE 63
+E F +D+ G+G +S ++ + + + L +E ++ I+ +D DG G +D E
Sbjct: 3 QELREAFRLYDKEGNGYISTDVMREILAEL---DETLSSEDLDAMIDEIDADGSGTVDFE 59
Query: 64 DLVGLIEG 71
+ +G++ G
Sbjct: 60 EFMGVMTG 67
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 70/136 (51%), Gaps = 3/136 (2%)
Query: 3 KGREYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDL 62
+ +E F FD N DG + E+K + G ++ E+ I+ D +G
Sbjct: 21 QKQEIYEAFSLFDXNNDGFLDYHELK--VAXKALGFELPKREILDLIDEYDSEGRHLXKY 78
Query: 63 EDLVGLI-EGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMI 121
+D + E + L +++ AF L+D D+ G IS +L+R+ +LGE+ + +E R I
Sbjct: 79 DDFYIVXGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAXI 138
Query: 122 DRFDLNGDGVLSFEEF 137
+ FDL+GDG ++ EF
Sbjct: 139 EEFDLDGDGEINENEF 154
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%)
Query: 75 EEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLSF 134
EE+ +++ EAF L+D +N GF+ ++LK LG E +ID +D G + +
Sbjct: 19 EEQKQEIYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYDSEGRHLXKY 78
Query: 135 EEFRIM 140
++F I+
Sbjct: 79 DDFYIV 84
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 79 KDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLSFEEF- 137
++L+EAF ++D D GFIS +L+ ++ LGE + +E MI D++GDG +++EEF
Sbjct: 4 EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 63
Query: 138 RIMM 141
++MM
Sbjct: 64 KVMM 67
Score = 29.3 bits (64), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E + F FD++ +G +S +E+++ M + G + EV+ I D DGDG ++ E+
Sbjct: 5 ELKEAFRVFDKDQNGFISAAELRHVMTNL--GEKLTDEEVDEMIREADVDGDGQINYEEF 62
Query: 66 VGLI 69
V ++
Sbjct: 63 VKVM 66
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 52.4 bits (124), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 42/63 (66%)
Query: 79 KDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLSFEEFR 138
+++REAF ++D D G+IS +L+ ++ LGE + +E MI D++GDG +++EEF
Sbjct: 2 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 61
Query: 139 IMM 141
MM
Sbjct: 62 QMM 64
Score = 32.3 bits (72), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E F FD++G+G +S +E+++ M + G + EV+ I D DGDG ++ E+
Sbjct: 3 EIREAFRVFDKDGNGYISAAELRHVMTNL--GEKLTDEEVDEMIREADIDGDGQVNYEEF 60
Query: 66 VGLI 69
V ++
Sbjct: 61 VQMM 64
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 52.4 bits (124), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 42/63 (66%)
Query: 79 KDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLSFEEFR 138
+++REAF ++D D G+IS +L+ ++ LGE + +E MI D++GDG +++EEF
Sbjct: 5 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 64
Query: 139 IMM 141
MM
Sbjct: 65 QMM 67
Score = 32.0 bits (71), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E F FD++G+G +S +E+++ M + G + EV+ I D DGDG ++ E+
Sbjct: 6 EIREAFRVFDKDGNGYISAAELRHVMTNL--GEKLTDEEVDEMIREADIDGDGQVNYEEF 63
Query: 66 VGLI 69
V ++
Sbjct: 64 VQMM 67
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 52.4 bits (124), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 42/63 (66%)
Query: 79 KDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLSFEEFR 138
+++REAF ++D D G+IS +L+ ++ LGE + +E MI D++GDG +++EEF
Sbjct: 5 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 64
Query: 139 IMM 141
MM
Sbjct: 65 QMM 67
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E F FD++G+G +S +E+++ M + G + EV+ I D DGDG ++ E+
Sbjct: 6 EIREAFRVFDKDGNGYISAAELRHVMTNL--GEKLTDEEVDEMIREADIDGDGQVNYEEF 63
Query: 66 VGLI 69
V ++
Sbjct: 64 VQMM 67
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 52.4 bits (124), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 42/63 (66%)
Query: 79 KDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLSFEEFR 138
+++REAF ++D D G+IS +L+ ++ LGE + +E MI D++GDG +++EEF
Sbjct: 6 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 65
Query: 139 IMM 141
MM
Sbjct: 66 QMM 68
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E F FD++G+G +S +E+++ M + G + EV+ I D DGDG ++ E+
Sbjct: 7 EIREAFRVFDKDGNGYISAAELRHVMTNL--GEKLTDEEVDEMIREADIDGDGQVNYEEF 64
Query: 66 VGLI 69
V ++
Sbjct: 65 VQMM 68
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 42/63 (66%)
Query: 79 KDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLSFEEFR 138
+++REAF ++D D G+IS DL+ ++ LGE + +E MI D++GDG +++E+F
Sbjct: 7 EEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEDFV 66
Query: 139 IMM 141
MM
Sbjct: 67 QMM 69
Score = 32.3 bits (72), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E F FD++G+G +S +++++ M + G + EV+ I D DGDG ++ ED
Sbjct: 8 EIREAFRVFDKDGNGYISAADLRHVMTNL--GEKLTDEEVDEMIREADIDGDGQVNYEDF 65
Query: 66 VGLI 69
V ++
Sbjct: 66 VQMM 69
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 42/63 (66%)
Query: 79 KDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLSFEEFR 138
+++REAF ++D D G+IS +L+ ++ LGE + +E MI D++GDG +++EEF
Sbjct: 8 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 67
Query: 139 IMM 141
MM
Sbjct: 68 QMM 70
Score = 32.3 bits (72), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E F FD++G+G +S +E+++ M + G + EV+ I D DGDG ++ E+
Sbjct: 9 EIREAFRVFDKDGNGYISAAELRHVMTNL--GEKLTDEEVDEMIREADIDGDGQVNYEEF 66
Query: 66 VGLI 69
V ++
Sbjct: 67 VQMM 70
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 42/63 (66%)
Query: 79 KDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLSFEEFR 138
+++REAF ++D D G+IS +L+ ++ LGE + +E MI D++GDG +++EEF
Sbjct: 9 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 68
Query: 139 IMM 141
MM
Sbjct: 69 QMM 71
Score = 32.3 bits (72), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E F FD++G+G +S +E+++ M + G + EV+ I D DGDG ++ E+
Sbjct: 10 EIREAFRVFDKDGNGYISAAELRHVMTNL--GEKLTDEEVDEMIREADIDGDGQVNYEEF 67
Query: 66 VGLI 69
V ++
Sbjct: 68 VQMM 71
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
E++L+++REAF ++D D GFIS +L + LG + E ++I R D++GDG +
Sbjct: 31 PEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVD 90
Query: 134 FEEFRIMM 141
FEEF ++
Sbjct: 91 FEEFVTLL 98
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVE--VAIESLDKDGDGFLDLE 63
E F FD +G+G +S K +G + + NEVE V I+ LD DGDG +D E
Sbjct: 37 EIREAFKVFDRDGNGFIS----KQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFE 92
Query: 64 DLVGLI 69
+ V L+
Sbjct: 93 EFVTLL 98
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE++ + +EAF L+D D G I+ +L ++ LG++ + E + MI+ D +GDG +
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTID 64
Query: 134 FEEFRIMM 141
F EF MM
Sbjct: 65 FPEFLTMM 72
Score = 34.3 bits (77), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DGDG +D +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGDGTIDFPEF 68
Query: 66 VGLI 69
+ ++
Sbjct: 69 LTMM 72
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor
Domain Of Centrin
Length = 96
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 38/68 (55%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE+ +++REAF L+D D G I +LK + LG +E + MI D +G G +
Sbjct: 25 TEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTID 84
Query: 134 FEEFRIMM 141
FEEF MM
Sbjct: 85 FEEFLTMM 92
Score = 32.7 bits (73), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 5 REYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLED 64
+E F FD +G G + E+K + M G + E++ I +DKDG G +D E+
Sbjct: 30 QEIREAFDLFDTDGSGTIDAKELK--VAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEE 87
Query: 65 LVGLI 69
+ ++
Sbjct: 88 FLTMM 92
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 41/63 (65%)
Query: 79 KDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLSFEEFR 138
+++REAF + D D G+IS +L+ ++ LGE + +E MI D++GDG +++EEF
Sbjct: 29 EEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 88
Query: 139 IMM 141
MM
Sbjct: 89 QMM 91
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E F D++G+G +S +E+++ M + G + EV+ I D DGDG ++ E+
Sbjct: 30 EIREAFRVEDKDGNGYISAAELRHVMTNL--GEKLTDEEVDEMIREADIDGDGQVNYEEF 87
Query: 66 VGLI 69
V ++
Sbjct: 88 VQMM 91
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE++ + +EAF L+D D G I+ +L ++ LG++ + E + MI+ D +G+G +
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 134 FEEFRIMM 141
F EF MM
Sbjct: 65 FPEFLTMM 72
Score = 32.7 bits (73), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DG+G +D +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 66 VGLI 69
+ ++
Sbjct: 69 LTMM 72
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE++ + +EAF L+D D G I+ +L ++ LG++ + E + MI+ D +G+G +
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 134 FEEFRIMM 141
F EF MM
Sbjct: 66 FPEFLTMM 73
Score = 32.7 bits (73), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DG+G +D +
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGNGTIDFPEF 69
Query: 66 VGLI 69
+ ++
Sbjct: 70 LTMM 73
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE++ + +EAF L+D D G I+ +L ++ LG++ + E + MI+ D +G+G +
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 134 FEEFRIMM 141
F EF MM
Sbjct: 65 FPEFLTMM 72
Score = 32.7 bits (73), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DG+G +D +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 66 VGLI 69
+ ++
Sbjct: 69 LTMM 72
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE++ + +EAF L+D D G I+ +L ++ LG++ + E + MI+ D +G+G +
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 134 FEEFRIMM 141
F EF MM
Sbjct: 65 FPEFLTMM 72
Score = 32.7 bits (73), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DG+G +D +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 66 VGLI 69
+ ++
Sbjct: 69 LTMM 72
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE++ + +EAF L+D D G I+ +L ++ LG++ + E + MI+ D +G+G +
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 134 FEEFRIMM 141
F EF MM
Sbjct: 65 FPEFLTMM 72
Score = 32.7 bits (73), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DG+G +D +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 66 VGLI 69
+ ++
Sbjct: 69 LTMM 72
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE++ + +EAF L+D D G I+ +L ++ LG++ + E + MI+ D +G+G +
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 134 FEEFRIMM 141
F EF MM
Sbjct: 65 FPEFLTMM 72
Score = 32.7 bits (73), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DG+G +D +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 66 VGLI 69
+ ++
Sbjct: 69 LTMM 72
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE++ + +EAF L+D D G I+ +L ++ LG++ + E + MI+ D +G+G +
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 134 FEEFRIMM 141
F EF MM
Sbjct: 65 FPEFLTMM 72
Score = 32.7 bits (73), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DG+G +D +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 66 VGLI 69
+ ++
Sbjct: 69 LTMM 72
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 40/63 (63%)
Query: 79 KDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLSFEEFR 138
++L EAF ++D D G IS +L+ ++ LGE + DE MI D++GDG +++EEF
Sbjct: 8 EELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFV 67
Query: 139 IMM 141
MM
Sbjct: 68 RMM 70
Score = 32.3 bits (72), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 10 VFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDLVGLI 69
F FD +G+G +S +E+++ M + G + +EV+ I D DGDG ++ E+ V ++
Sbjct: 13 AFKVFDRDGNGLISAAELRHVMTNL--GEKLTDDEVDEMIREADIDGDGHINYEEFVRMM 70
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE++ + +EAF L+D D G I+ +L ++ LG++ + E + MI+ D +G+G +
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 134 FEEFRIMM 141
F EF MM
Sbjct: 65 FPEFLTMM 72
Score = 34.3 bits (77), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 13/86 (15%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DG+G +D +
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSL--GQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 66 VGLIEGASAEEKLKD------LREAF 85
+ ++ K+KD +REAF
Sbjct: 69 LTMM-----ARKMKDTDSEEEIREAF 89
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 66/136 (48%), Gaps = 15/136 (11%)
Query: 8 ERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNE--VEVAIESLDKDGDGFLDLEDL 65
E +F D NGDG VS E+K V + NE +++ +++D DG+G +DL +
Sbjct: 3 EALFKQLDANGDGSVSYEEVK----AFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEF 58
Query: 66 VGLIEGASAEEKLKD----LREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMI 121
A E+ L D L+ + L D D G ++ ++ K G K +D+ I
Sbjct: 59 TKFA-AAVKEQDLSDEKVGLKILYKLMDADGDGKLTKEEVTTFFKKFGYEKVVDQ----I 113
Query: 122 DRFDLNGDGVLSFEEF 137
+ D NGDG ++ EEF
Sbjct: 114 MKADANGDGYITLEEF 129
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 43/68 (63%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
+EE++ D +EAFGL+D D G I+ +L ++ L ++ + +E + MI D +G+G +
Sbjct: 5 SEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIE 64
Query: 134 FEEFRIMM 141
F+EF +M
Sbjct: 65 FDEFLSLM 72
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 52 LDKDGDGFLDLEDLVGLIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAK 107
DKDGDG + +E+L +I ++L++ D D G I ++ ++AK
Sbjct: 19 FDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLMAK 74
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 43/68 (63%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
+EE++ D +EAFGL+D D G I+ +L ++ L ++ + +E + MI D +G+G +
Sbjct: 5 SEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIE 64
Query: 134 FEEFRIMM 141
F+EF +M
Sbjct: 65 FDEFLSLM 72
Score = 28.1 bits (61), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 52 LDKDGDGFLDLEDLVGLIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAK 107
DKDGDG + +E+L +I ++L++ D D G I ++ ++AK
Sbjct: 19 FDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLMAK 74
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE++ + +EAF LYD D G I+ +L ++ LG + + E + MI+ D +G+G +
Sbjct: 5 TEEQIAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTID 64
Query: 134 FEEFRIMM 141
F EF MM
Sbjct: 65 FPEFLTMM 72
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE++ + +EAF L+D DN G IS ++L ++ LG S S E +++ D++G+ +
Sbjct: 6 TEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIE 65
Query: 134 FEEFRIMM 141
F EF +M
Sbjct: 66 FSEFLALM 73
Score = 46.2 bits (108), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 71/142 (50%), Gaps = 14/142 (9%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRM---GMIVGGGDV--LLNEVEVAIESLDKDGDGFL 60
E++ F FD++ G +S SE+ M G+ +V L+NE++V DG+ +
Sbjct: 12 EFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDV-------DGNHAI 64
Query: 61 DLEDLVGLIE-GASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRM 119
+ + + L+ + ++L EAF ++D + G IS +LK +L +GE + E
Sbjct: 65 EFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDE 124
Query: 120 MIDRFDLNGDGVLSFEEFRIMM 141
M+ +G G ++ ++F ++
Sbjct: 125 MLREVS-DGSGEINIKQFAALL 145
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 5 REYERVFVYFDENGDGKVSPSEIKNRMGMI 34
+E F FD+NGDG +S +E+K+ + I
Sbjct: 84 QELLEAFKVFDKNGDGLISAAELKHVLTSI 113
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE++ + +EAF L+D DN G IS ++L ++ LG S S E +++ D++G+ +
Sbjct: 5 TEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIE 64
Query: 134 FEEFRIMM 141
F EF +M
Sbjct: 65 FSEFLALM 72
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 73/142 (51%), Gaps = 14/142 (9%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRM---GMIVGGGDV--LLNEVEVAIESLDKDGDGFL 60
E++ F FD++ +G +S SE+ M G+ +V L+NE++V DG+ +
Sbjct: 11 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDV-------DGNHQI 63
Query: 61 DLEDLVGLIEGA-SAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRM 119
+ + + L+ + + ++L EAF ++D + G IS +LK +L +GE + E
Sbjct: 64 EFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDD 123
Query: 120 MIDRFDLNGDGVLSFEEFRIMM 141
M+ +G G ++ ++F ++
Sbjct: 124 MLREVS-DGSGEINIQQFAALL 144
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 5 REYERVFVYFDENGDGKVSPSEIKNRMGMI 34
+E F FD+NGDG +S +E+K+ + I
Sbjct: 83 QELLEAFKVFDKNGDGLISAAELKHVLTSI 112
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE++ + +EAF L+D DN G IS ++L ++ LG S S E +++ D++G+ +
Sbjct: 5 TEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIE 64
Query: 134 FEEFRIMM 141
F EF +M
Sbjct: 65 FSEFLALM 72
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 59/111 (53%), Gaps = 13/111 (11%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRM---GMIVGGGDV--LLNEVEVAIESLDKDGDGFL 60
E++ F FD++ +G +S SE+ M G+ +V L+NE++V DG+ +
Sbjct: 11 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDV-------DGNHQI 63
Query: 61 DLEDLVGLIE-GASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGE 110
+ + + L+ + + ++L EAF ++D + G IS +LK +L +GE
Sbjct: 64 EFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGE 114
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 5 REYERVFVYFDENGDGKVSPSEIKNRMGMI 34
+E F FD+NGDG +S +E+K+ + I
Sbjct: 83 QELLEAFKVFDKNGDGLISAAELKHVLTSI 112
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE++ + +EAF L+D DN G IS ++L ++ LG S S E +++ D++G+ +
Sbjct: 5 TEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIE 64
Query: 134 FEEFRIMM 141
F EF +M
Sbjct: 65 FSEFLALM 72
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 12/69 (17%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRM---GMIVGGGDV--LLNEVEVAIESLDKDGDGFL 60
E++ F FD++ +G +S SE+ M G+ +V L+NE++V DG+ +
Sbjct: 11 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDV-------DGNHQI 63
Query: 61 DLEDLVGLI 69
+ + + L+
Sbjct: 64 EFSEFLALM 72
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE++ + +EAF L+D DN G IS ++L ++ LG S S E +++ D++G+ +
Sbjct: 6 TEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIE 65
Query: 134 FEEFRIMM 141
F EF +M
Sbjct: 66 FSEFLALM 73
Score = 46.2 bits (108), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 73/142 (51%), Gaps = 14/142 (9%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRM---GMIVGGGDV--LLNEVEVAIESLDKDGDGFL 60
E++ F FD++ +G +S SE+ M G+ +V L+NE++V DG+ +
Sbjct: 12 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDV-------DGNHQI 64
Query: 61 DLEDLVGLIEGA-SAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRM 119
+ + + L+ + + ++L EAF ++D + G IS +LK +L +GE + E
Sbjct: 65 EFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDD 124
Query: 120 MIDRFDLNGDGVLSFEEFRIMM 141
M+ +G G ++ ++F ++
Sbjct: 125 MLREVS-DGSGEINIQQFAALL 145
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 5 REYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLED 64
+E F FD+NGDG +S +E+K+ + I G + EV+ + + DG G ++++
Sbjct: 84 QELLEAFKVFDKNGDGLISAAELKHVLTSI--GEKLTDAEVDDMLREV-SDGSGEINIQQ 140
Query: 65 LVGLI-EGASAEEKLKDLR 82
L+ +G+S + K LR
Sbjct: 141 FAALLSKGSSTGTRRKALR 159
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 69/131 (52%), Gaps = 12/131 (9%)
Query: 19 DGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDLVGLI-------EG 71
DG +S E+ M M+ G + E++ I+ +D+DG G +D ++ + ++
Sbjct: 33 DGSISTKELGKVMRML--GQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSK 90
Query: 72 ASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGV 131
+EE+L DL F ++D + G+I ++LK ML GE+ + D+ ++ D N DG
Sbjct: 91 GKSEEELSDL---FRMWDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGR 147
Query: 132 LSFEEFRIMMQ 142
+ ++EF M+
Sbjct: 148 IDYDEFLEFMK 158
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 74 AEEKLKDLREAFGLYDFDNR-GFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVL 132
EE+ + + AF ++ G IS +L +++ LG++ + +E + MID D +G G +
Sbjct: 13 TEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTV 72
Query: 133 SFEEFRIMM 141
F+EF +MM
Sbjct: 73 DFDEFLVMM 81
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 71/134 (52%), Gaps = 3/134 (2%)
Query: 5 REYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLED 64
+E F FD +G G + E+K + G + E++ I +DK+G G + D
Sbjct: 31 QEIREAFDLFDADGTGTIDVKELK--VAXRALGFEPKKEEIKKXISEIDKEGTGKXNFGD 88
Query: 65 LVGLIEGASAEEKLKD-LREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDR 123
+ + +E+ K+ + +AF L+D D G IS +LKR+ +LGE+ + +E + ID
Sbjct: 89 FLTVXTQKXSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEXIDE 148
Query: 124 FDLNGDGVLSFEEF 137
D +GDG +S +EF
Sbjct: 149 ADRDGDGEVSEQEF 162
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLG 109
EE+ +++REAF L+D D G I +LK LG
Sbjct: 26 TEEQKQEIREAFDLFDADGTGTIDVKELKVAXRALG 61
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 73/143 (51%), Gaps = 19/143 (13%)
Query: 10 VFVYFDENGDGKVSPSEIKN---RMGMIVGGG-DVLLNEVEVAIESLDKDGDGFLD-LED 64
F++ DE G G ++ +++ R G+++ D+LL+++ D DG G +D E
Sbjct: 60 AFLHLDEEGKGNITKLQLRKGLERSGLMLPPNFDLLLDQI-------DSDGSGNIDYTEF 112
Query: 65 LVGLIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRML---AKLGE--SKSIDECRM 119
L I+ +KL + AF ++D DN G I+ +L +L K G + +++ +
Sbjct: 113 LAAAIDRRQLSKKL--IYCAFRVFDVDNDGEITTAELAHVLFNGNKRGNITERDVNQVKK 170
Query: 120 MIDRFDLNGDGVLSFEEFRIMMQ 142
MI D NGDG + F EF MM+
Sbjct: 171 MIREVDKNGDGKIDFYEFSEMMK 193
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 45 VEVAIESLDKDGDGFLDLEDLVGLIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLK-- 102
VE E+ D + DG++D + V + + + LR F LYD D G I +L
Sbjct: 54 VEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNI 113
Query: 103 ----RMLAKLGESKSIDE-CRMMIDRFDLNGDGVLSFEEF 137
R + + E+ + +E M+ D+ D+NGDG LS EEF
Sbjct: 114 IKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEF 153
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
+ ER+F FD NGDGK+S SE+ + + + G +EV+ + +D DGDGF+D +
Sbjct: 4 DMERIFKRFDTNGDGKISLSELTDALRTL---GSTSADEVQRMMAEIDTDGDGFIDFNEF 60
Query: 66 VGLIEGASAEEKLKDLREAF 85
+ +KD+ + F
Sbjct: 61 ISFCNANPG--LMKDVAKVF 78
Score = 34.3 bits (77), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 80 DLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLSFEEF 137
D+ F +D + G IS ++L L LG S S DE + M+ D +GDG + F EF
Sbjct: 4 DMERIFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEF 60
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 65 LVGLIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRF 124
L + + S ++ +++ +AF L+D D G IS +LKR+ +LGE+ + +E + MID
Sbjct: 7 LTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEA 66
Query: 125 DLNGDGVLSFEEF-RIM 140
D +GDG +S +EF RIM
Sbjct: 67 DRDGDGEVSEQEFLRIM 83
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
+ ER+F FD NGDGK+S SE+ + + + G +EV+ + +D DGDGF+D +
Sbjct: 3 DMERIFKRFDTNGDGKISLSELTDALRTL---GSTSADEVQRMMAEIDTDGDGFIDFNEF 59
Query: 66 VGLIEGASAEEKLKDLREAF 85
+ +KD+ + F
Sbjct: 60 ISFCNANPG--LMKDVAKVF 77
Score = 34.3 bits (77), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 80 DLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLSFEEF 137
D+ F +D + G IS ++L L LG S S DE + M+ D +GDG + F EF
Sbjct: 3 DMERIFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEF 59
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 68/131 (51%), Gaps = 12/131 (9%)
Query: 19 DGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDLVGLI-------EG 71
DG +S E+ M M+ G + E++ I+ +D+DG G +D ++ + ++
Sbjct: 33 DGSISTKELGKVMRML--GQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSK 90
Query: 72 ASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGV 131
+EE+L DL F ++D + G+I +LK ML GE+ + D+ ++ D N DG
Sbjct: 91 GKSEEELSDL---FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGR 147
Query: 132 LSFEEFRIMMQ 142
+ ++EF M+
Sbjct: 148 IDYDEFLEFMK 158
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 74 AEEKLKDLREAFGLYDFDNR-GFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVL 132
EE+ + + AF ++ G IS +L +++ LG++ + +E + MID D +G G +
Sbjct: 13 TEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTV 72
Query: 133 SFEEFRIMM 141
F+EF +MM
Sbjct: 73 DFDEFLVMM 81
Score = 26.6 bits (57), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 5 REYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLED 64
E +F FD+N DG + E+K + + G + +++E ++ DK+ DG +D ++
Sbjct: 95 EELSDLFRMFDKNADGYIDLEELK--IMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 65 LVGLIEGA 72
+ ++G
Sbjct: 153 FLEFMKGV 160
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 12/131 (9%)
Query: 19 DGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDLVGLI-------EG 71
DG +S E+ M M+ G + E++ I+ +D+DG G +D ++ + ++
Sbjct: 33 DGSISTKELGKVMRML--GQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSK 90
Query: 72 ASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGV 131
EE+L DL F ++D + G+I +LK ML GE+ + D+ ++ D N DG
Sbjct: 91 GKTEEELSDL---FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGR 147
Query: 132 LSFEEFRIMMQ 142
+ ++EF M+
Sbjct: 148 IDYDEFLEFMK 158
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 74 AEEKLKDLREAFGLYDFDNR-GFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVL 132
EE+ + + AF ++ G IS +L +++ LG++ + +E + MID D +G G +
Sbjct: 13 TEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTV 72
Query: 133 SFEEFRIMM 141
F+EF +MM
Sbjct: 73 DFDEFLVMM 81
Score = 26.6 bits (57), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 5 REYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLED 64
E +F FD+N DG + E+K + + G + +++E ++ DK+ DG +D ++
Sbjct: 95 EELSDLFRMFDKNADGYIDLEELK--IMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 65 LVGLIEG 71
+ ++G
Sbjct: 153 FLEFMKG 159
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 46/74 (62%), Gaps = 5/74 (6%)
Query: 68 LIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLN 127
+ E + EE LK AF L+D D G IS +LKR+ +LGE+ + +E + MID D +
Sbjct: 4 MSEKDTKEEILK----AFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRD 59
Query: 128 GDGVLSFEEF-RIM 140
GDG +S +EF RIM
Sbjct: 60 GDGEVSEQEFLRIM 73
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 46.2 bits (108), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 69/131 (52%), Gaps = 12/131 (9%)
Query: 19 DGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDLVGLI-------EG 71
DG +S E+ M M+ G + E++ I+ +D+DG G +D ++ + ++
Sbjct: 33 DGSISTKELGKVMRML--GQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSK 90
Query: 72 ASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGV 131
+EE+L DL F ++D + G+I ++LK ML GE+ + D+ ++ D N DG
Sbjct: 91 GKSEEELSDL---FRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGR 147
Query: 132 LSFEEFRIMMQ 142
+ ++E+ M+
Sbjct: 148 IDYDEWLEFMK 158
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 74 AEEKLKDLREAFGLYDFDNR-GFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVL 132
EE+ + + AF ++ G IS +L +++ LG++ + +E + MID D +G G +
Sbjct: 13 TEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTV 72
Query: 133 SFEEFRIMM 141
F+EF +MM
Sbjct: 73 DFDEFLVMM 81
Score = 26.6 bits (57), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 5 REYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLED 64
E +F FD+N DG + E+K + + G + +++E ++ DK+ DG +D ++
Sbjct: 95 EELSDLFRMFDKNADGYIDLDELK--IMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 65 LVGLIEGA 72
+ ++G
Sbjct: 153 WLEFMKGV 160
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E ER+F FD NGDGK+S +E+ + + G + +EV+ + +D DGDGF+ ++
Sbjct: 10 ERERIFKRFDANGDGKISAAELGEALKTL---GSITPDEVKHMMAEIDTDGDGFISFQEF 66
Query: 66 VGLIEGASAEEKLKDLREAF 85
G + LKD+ + F
Sbjct: 67 TDF--GRANRGLLKDVAKIF 84
Score = 35.4 bits (80), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 85 FGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLSFEEF 137
F +D + G IS +L L LG S + DE + M+ D +GDG +SF+EF
Sbjct: 15 FKRFDANGDGKISAAELGEALKTLG-SITPDEVKHMMAEIDTDGDGFISFQEF 66
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain Of
Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr, 40
Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle, Nmr,
Minimized Average Structure
Length = 90
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
+EE + + + AF ++D D G IS +L ++ LG++ + +E +I+ D +G G +
Sbjct: 15 SEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTID 74
Query: 134 FEEFRIMM 141
FEEF +MM
Sbjct: 75 FEEFLVMM 82
Score = 35.4 bits (80), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD +G G +S E+ M M+ G + E++ IE +D+DG G +D E+
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRML--GQNPTKEELDAIIEEVDEDGSGTIDFEEF 78
Query: 66 VGLI 69
+ ++
Sbjct: 79 LVMM 82
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal Muscle
Troponin-C
Length = 76
Score = 45.8 bits (107), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
+EE + + + AF ++D D G IS +L ++ LG++ + +E +I+ D +G G +
Sbjct: 4 SEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTID 63
Query: 134 FEEFRIMM 141
FEEF +MM
Sbjct: 64 FEEFLVMM 71
Score = 35.0 bits (79), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD +G G +S E+ M M+ G + E++ IE +D+DG G +D E+
Sbjct: 10 EFKAAFDMFDADGGGDISTKELGTVMRML--GQNPTKEELDAIIEEVDEDGSGTIDFEEF 67
Query: 66 V 66
+
Sbjct: 68 L 68
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 45.8 bits (107), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
+E++ + +EAF L+D D G I+ +L ++ LG++ + E + MI+ D +G+G +
Sbjct: 5 TDEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 134 FEEFRIMM 141
F EF +M
Sbjct: 65 FPEFLNLM 72
Score = 33.1 bits (74), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD++GDG ++ E+ M + G + E++ I +D DG+G +D +
Sbjct: 11 EFKEAFSLFDKDGDGCITTKELGTVMRSL--GQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 66 VGLI 69
+ L+
Sbjct: 69 LNLM 72
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 45.8 bits (107), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 12/131 (9%)
Query: 19 DGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDLVGLI-------EG 71
DG +S E+ M M+ G + E++ I+ +D+DG G +D ++ + ++
Sbjct: 33 DGCISTKELGKVMRML--GQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSK 90
Query: 72 ASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGV 131
EE+L DL F ++D + G+I +LK ML GE+ + D+ ++ D N DG
Sbjct: 91 GKTEEELSDL---FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGR 147
Query: 132 LSFEEFRIMMQ 142
+ ++EF M+
Sbjct: 148 IDYDEFLEFMK 158
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 74 AEEKLKDLREAFGLYDFDNR-GFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVL 132
EE+ + + AF ++ G IS +L +++ LG++ + +E + MID D +G G +
Sbjct: 13 TEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTV 72
Query: 133 SFEEFRIMM 141
F+EF +MM
Sbjct: 73 DFDEFLVMM 81
Score = 26.6 bits (57), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 5 REYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLED 64
E +F FD+N DG + E+K + + G + +++E ++ DK+ DG +D ++
Sbjct: 95 EELSDLFRMFDKNADGYIDLEELK--IMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 65 LVGLIEGA 72
+ ++G
Sbjct: 153 FLEFMKGV 160
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 45.8 bits (107), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 13/137 (9%)
Query: 13 YFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDLVGLIEGA 72
+F + G ++ SE + GD E D D +G++D ++ + +
Sbjct: 34 FFKDCPSGHLNKSEFQKIYKQFFPFGDPSAF-AEYVFNVFDADKNGYIDFKEFICALSVT 92
Query: 73 SAEEKLKDLREAFGLYDFDNRGFISPNDLKRM----------LAKLGESKSIDECRM--M 120
S E L AF LYD DN G IS +++ R+ + KL E + E R+ +
Sbjct: 93 SRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKI 152
Query: 121 IDRFDLNGDGVLSFEEF 137
+ D N DG L+ EEF
Sbjct: 153 FNMMDKNKDGQLTLEEF 169
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 45.8 bits (107), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 68/131 (51%), Gaps = 12/131 (9%)
Query: 19 DGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDLVGLI-------EG 71
DG +S E+ M M+ G + E++ I+ +D+DG G +D ++ + ++
Sbjct: 33 DGSISTKELGKVMRML--GQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSK 90
Query: 72 ASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGV 131
+EE+L DL F + D + G+I ++LK ML GE+ + D+ ++ D N DG
Sbjct: 91 GKSEEELSDL---FRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGR 147
Query: 132 LSFEEFRIMMQ 142
+ ++EF M+
Sbjct: 148 IDYDEFLEFMK 158
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 74 AEEKLKDLREAFGLYDFDNR-GFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVL 132
EE+ + + AF ++ G IS +L +++ LG++ + +E + MID D +G G +
Sbjct: 13 TEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTV 72
Query: 133 SFEEFRIMM 141
F+EF +MM
Sbjct: 73 DFDEFLVMM 81
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 45.4 bits (106), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 13/130 (10%)
Query: 20 GKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDLVGLIEGASAEEKLK 79
G +S E K G GD E + D +GDG +D + + + S + +
Sbjct: 41 GHLSMEEFKKIYGNFFPYGDAS-KFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQ 99
Query: 80 DLREAFGLYDFDNRGFISPNDLKRMLA----------KLGESKSIDECRM--MIDRFDLN 127
L+ AF +YD D G+IS ++ ++ K+ E +S E R + + D N
Sbjct: 100 KLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTN 159
Query: 128 GDGVLSFEEF 137
DG LS EEF
Sbjct: 160 RDGKLSLEEF 169
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 58/99 (58%), Gaps = 6/99 (6%)
Query: 45 VEVAIESLDKDGDGFLDLEDLV-GLIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKR 103
V+ I+ D DG+G +D ++ + G+ + + +K + LR AF +YD D G+IS +L +
Sbjct: 55 VQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQ 114
Query: 104 MLAKL-GESKSIDECRMMIDRFDLN----GDGVLSFEEF 137
+L + G + + + ++D+ +N GDG +SFEEF
Sbjct: 115 VLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEF 153
Score = 33.1 bits (74), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 2 VKGREYERV---FVYFDENGDGKVSPSEIKNRMGMIVGGG--DVLLNE-VEVAIESLDKD 55
VKG + +++ F +D + DG +S E+ + M+VG D L + V+ I + DKD
Sbjct: 84 VKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKD 143
Query: 56 GDGFLDLEDLVGLIEGASAEEKL 78
GDG + E+ ++ G +K+
Sbjct: 144 GDGRISFEEFCAVVGGLDIHKKM 166
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 11/130 (8%)
Query: 10 VFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEV--AIESLDKDGDGFLDLEDLVG 67
VF D++ G +S +E++ + G N V V I D++ ++ + G
Sbjct: 30 VFQRVDKDRSGVISDTELQQALS---NGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 86
Query: 68 LIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLN 127
+ + + D + F YD DN G I N+LK+ L+ G S ++I +FD
Sbjct: 87 VWK------YITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQ 140
Query: 128 GDGVLSFEEF 137
G G ++F++F
Sbjct: 141 GRGQIAFDDF 150
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 11/130 (8%)
Query: 10 VFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEV--AIESLDKDGDGFLDLEDLVG 67
VF D++ G +S +E++ + G N V V I D++ ++ + G
Sbjct: 9 VFQRVDKDRSGVISDTELQQALS---NGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 65
Query: 68 LIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLN 127
+ + + D + F YD DN G I N+LK+ L+ G S ++I +FD
Sbjct: 66 VWK------YITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQ 119
Query: 128 GDGVLSFEEF 137
G G ++F++F
Sbjct: 120 GRGQIAFDDF 129
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 58/99 (58%), Gaps = 6/99 (6%)
Query: 45 VEVAIESLDKDGDGFLDLEDLV-GLIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKR 103
V+ I+ D DG+G +D ++ + G+ + + +K + LR AF +YD D G+IS +L +
Sbjct: 41 VQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQ 100
Query: 104 MLAKL-GESKSIDECRMMIDRFDLN----GDGVLSFEEF 137
+L + G + + + ++D+ +N GDG +SFEEF
Sbjct: 101 VLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEF 139
Score = 33.1 bits (74), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 2 VKGREYERV---FVYFDENGDGKVSPSEIKNRMGMIVGGG--DVLLNE-VEVAIESLDKD 55
VKG + +++ F +D + DG +S E+ + M+VG D L + V+ I + DKD
Sbjct: 70 VKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKD 129
Query: 56 GDGFLDLEDLVGLIEGASAEEKL 78
GDG + E+ ++ G +K+
Sbjct: 130 GDGRISFEEFCAVVGGLDIHKKM 152
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 58/99 (58%), Gaps = 6/99 (6%)
Query: 45 VEVAIESLDKDGDGFLDLEDLV-GLIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKR 103
V+ I+ D DG+G +D ++ + G+ + + +K + LR AF +YD D G+IS +L +
Sbjct: 54 VQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQ 113
Query: 104 MLAKL-GESKSIDECRMMIDRFDLN----GDGVLSFEEF 137
+L + G + + + ++D+ +N GDG +SFEEF
Sbjct: 114 VLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEF 152
Score = 33.1 bits (74), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 2 VKGREYERV---FVYFDENGDGKVSPSEIKNRMGMIVGGG--DVLLNE-VEVAIESLDKD 55
VKG + +++ F +D + DG +S E+ + M+VG D L + V+ I + DKD
Sbjct: 83 VKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKD 142
Query: 56 GDGFLDLEDLVGLIEGASAEEKL 78
GDG + E+ ++ G +K+
Sbjct: 143 GDGRISFEEFCAVVGGLDIHKKM 165
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 58/99 (58%), Gaps = 6/99 (6%)
Query: 45 VEVAIESLDKDGDGFLDLEDLV-GLIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKR 103
V+ I+ D DG+G +D ++ + G+ + + +K + LR AF +YD D G+IS +L +
Sbjct: 40 VQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQ 99
Query: 104 MLAKL-GESKSIDECRMMIDRFDLN----GDGVLSFEEF 137
+L + G + + + ++D+ +N GDG +SFEEF
Sbjct: 100 VLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEF 138
Score = 32.7 bits (73), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 2 VKGREYERV---FVYFDENGDGKVSPSEIKNRMGMIVGGG--DVLLNE-VEVAIESLDKD 55
VKG + +++ F +D + DG +S E+ + M+VG D L + V+ I + DKD
Sbjct: 69 VKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKD 128
Query: 56 GDGFLDLEDLVGLIEGASAEEKL 78
GDG + E+ ++ G +K+
Sbjct: 129 GDGRISFEEFCAVVGGLDIHKKM 151
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 11/130 (8%)
Query: 10 VFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEV--AIESLDKDGDGFLDLEDLVG 67
VF D++ G +S +E++ + G N V V I D++ ++ + G
Sbjct: 12 VFQRVDKDRSGVISDTELQQALS---NGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 68
Query: 68 LIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLN 127
+ + + D + F YD DN G I N+LK+ L+ G S ++I +FD
Sbjct: 69 VWK------YITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQ 122
Query: 128 GDGVLSFEEF 137
G G ++F++F
Sbjct: 123 GRGQIAFDDF 132
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
+ ER+F FD NGDGK+S SE+ + + + G V +EV + +D DGDGF+ ++
Sbjct: 12 DRERIFKRFDTNGDGKISSSELGDALKTL---GSVTPDEVRRMMAEIDTDGDGFISFDEF 68
Query: 66 V 66
Sbjct: 69 T 69
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
+ + D F +D + G IS ++L L LG S + DE R M+ D +GDG +S
Sbjct: 6 TPQDIADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFIS 64
Query: 134 FEEF 137
F+EF
Sbjct: 65 FDEF 68
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 11/130 (8%)
Query: 10 VFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEV--AIESLDKDGDGFLDLEDLVG 67
VF D++ G +S +E++ + G N V V I D++ ++ + G
Sbjct: 8 VFQRVDKDRSGVISDTELQQALS---NGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 64
Query: 68 LIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLN 127
+ + + D + F YD DN G I N+LK+ L+ G S ++I +FD
Sbjct: 65 VWK------YITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQ 118
Query: 128 GDGVLSFEEF 137
G G ++F++F
Sbjct: 119 GRGQIAFDDF 128
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 71/148 (47%), Gaps = 13/148 (8%)
Query: 5 REYERVFVYFDENGDGKVSPSE-IKNRMGMIVGGGDVLLN--------EVEVAIESLDKD 55
+E ++F D NGDG++ E I+ ++ GD + + EV+ ++S+D D
Sbjct: 40 KELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFD 99
Query: 56 GDGFLDLEDLVGLIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSID 115
+G+++ + V + + L AF +D D G I+ +L R+ G ++ D
Sbjct: 100 RNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLF---GVTEVDD 156
Query: 116 EC-RMMIDRFDLNGDGVLSFEEFRIMMQ 142
E ++ D N DG + FEEF MMQ
Sbjct: 157 ETWHQVLQECDKNNDGEVDFEEFVEMMQ 184
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 13/135 (9%)
Query: 8 ERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNE--VEVAIESLDKDGDGFLDLEDL 65
E +F D NGDG VS E+K V + NE +++ +S+D DG+G +D +
Sbjct: 3 EALFKEIDVNGDGAVSYEEVK----AFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEF 58
Query: 66 V---GLIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMID 122
G I+G + L+ + L D D G ++ ++ K G I++ +
Sbjct: 59 AKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHG----IEKVAEQVM 114
Query: 123 RFDLNGDGVLSFEEF 137
+ D NGDG ++ EEF
Sbjct: 115 KADANGDGYITLEEF 129
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 13/135 (9%)
Query: 8 ERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNE--VEVAIESLDKDGDGFLDLEDL 65
E +F D NGDG VS E+K V + NE +++ +S+D DG+G +D +
Sbjct: 3 EALFKEIDVNGDGAVSYEEVK----AFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEF 58
Query: 66 V---GLIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMID 122
G I+G + L+ + L D D G ++ ++ K G I++ +
Sbjct: 59 AKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHG----IEKVAEQVM 114
Query: 123 RFDLNGDGVLSFEEF 137
+ D NGDG ++ EEF
Sbjct: 115 KADANGDGYITLEEF 129
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
A L+DL+ AF +D D G I+ ++L+R +A LG+ +E MI D++ DG ++
Sbjct: 1 ARAGLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVN 60
Query: 134 FEEFRIMM 141
+EEF M+
Sbjct: 61 YEEFARML 68
Score = 29.3 bits (64), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 10 VFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDLVGLI 69
F FD++GDG ++ E++ M + G + E++ I D D DG ++ E+ ++
Sbjct: 11 AFRAFDQDGDGHITVDELRRAMAGL--GQPLPQEELDAMIREADVDQDGRVNYEEFARML 68
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 66/125 (52%), Gaps = 12/125 (9%)
Query: 19 DGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDLVGLI-------EG 71
DG +S E+ M M+ G + E++ I+ +D+DG G +D ++ + ++
Sbjct: 33 DGSISTKELGKVMRML--GQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSK 90
Query: 72 ASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGV 131
+EE+L DL F ++D + G+I ++LK ML GE+ + D+ ++ D N DG
Sbjct: 91 GKSEEELSDL---FRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGR 147
Query: 132 LSFEE 136
+ ++E
Sbjct: 148 IDYDE 152
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 74 AEEKLKDLREAFGLYDFDNR-GFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVL 132
EE+ + + AF ++ G IS +L +++ LG++ + +E + MID D +G G +
Sbjct: 13 TEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTV 72
Query: 133 SFEEFRIMM 141
F+EF +MM
Sbjct: 73 DFDEFLVMM 81
Score = 25.8 bits (55), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 5 REYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLED 64
E +F FD+N DG + E+K + + G + +++E ++ DK+ DG +D ++
Sbjct: 95 EELSDLFRMFDKNADGYIDLDELK--IMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 65 LVGLIEGA 72
+ ++G
Sbjct: 153 XLEFMKGV 160
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 11/130 (8%)
Query: 10 VFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEV--AIESLDKDGDGFLDLEDLVG 67
VF D++ G +S +E++ + G N V V I D++ ++ + G
Sbjct: 31 VFQRVDKDRSGVISDNELQQALS---NGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 87
Query: 68 LIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLN 127
+ + + D + F YD DN G I N+LK+ L+ G S ++I +FD
Sbjct: 88 VWK------YITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQ 141
Query: 128 GDGVLSFEEF 137
G G ++F++F
Sbjct: 142 GRGQIAFDDF 151
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
+EE + + + AF ++D D G IS L ++ LG++ + +E +I+ D +G G +
Sbjct: 15 SEEMIAEFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTID 74
Query: 134 FEEFRIMM 141
FEEF +MM
Sbjct: 75 FEEFLVMM 82
Score = 33.5 bits (75), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD +G G +S + M M+ G + E++ IE +D+DG G +D E+
Sbjct: 21 EFKAAFDMFDADGGGDISTKALGTVMRML--GQNPTKEELDAIIEEVDEDGSGTIDFEEF 78
Query: 66 VGLI 69
+ ++
Sbjct: 79 LVMM 82
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 71/148 (47%), Gaps = 13/148 (8%)
Query: 5 REYERVFVYFDENGDGKVSPSE-IKNRMGMIVGGGDVLLN--------EVEVAIESLDKD 55
+E ++F D NGDG++ E I+ ++ GD + + EV+ ++S+D D
Sbjct: 314 KELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFD 373
Query: 56 GDGFLDLEDLVGLIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSID 115
+G+++ + V + + L AF +D D G I+ +L R+ G ++ D
Sbjct: 374 RNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLF---GVTEVDD 430
Query: 116 EC-RMMIDRFDLNGDGVLSFEEFRIMMQ 142
E ++ D N DG + FEEF MMQ
Sbjct: 431 ETWHQVLQECDKNNDGEVDFEEFVEMMQ 458
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 11/130 (8%)
Query: 10 VFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEV--AIESLDKDGDGFLDLEDLVG 67
VF D++ G +S +E++ + G N V V I D++ ++ + G
Sbjct: 12 VFQRVDKDRSGVISDTELQQALS---NGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 68
Query: 68 LIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLN 127
+ + + D + F YD DN G I N+LK+ L+ G S ++I +FD
Sbjct: 69 VWK------YITDWQNVFRTYDRDNSGMIDKNELKQALSGAGYRLSDQFHDILIRKFDRQ 122
Query: 128 GDGVLSFEEF 137
G G ++F++F
Sbjct: 123 GRGQIAFDDF 132
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain
Of Akazara Scallop Troponin C In Complex With A Troponin
I Fragment
Length = 74
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 79 KDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLSFEEFR 138
++L+EAF + D + +G I + L+ +L LG+ + DE MI D +G G + +EEF+
Sbjct: 7 RELKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYEEFK 66
Query: 139 IMM 141
+M
Sbjct: 67 CLM 69
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 72/142 (50%), Gaps = 8/142 (5%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E F FD++ DG ++ ++ N M +G + +E++ + ++ + G +D +D
Sbjct: 12 ELREAFREFDKDKDGYINCRDLGNCM-RTMGYMPTEMELIELS-QQINMNLGGHVDFDDF 69
Query: 66 VGLIEGASAEEK-----LKDLREAFGLYDFDNRGFISPNDLKR-MLAKLGESKSIDECRM 119
V L+ E +K+LR+AF +D + G IS ++L+ M A LG +
Sbjct: 70 VELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEE 129
Query: 120 MIDRFDLNGDGVLSFEEFRIMM 141
+I DLNGDG + FEEF MM
Sbjct: 130 IIRDVDLNGDGRVDFEEFVRMM 151
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 1 MVKGREYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFL 60
M+ +E F FD NGDG++S SE++ M ++ G V ++E I +D +GDG +
Sbjct: 84 MIGVKELRDAFREFDTNGDGEISTSELREAMRALL-GHQVGHRDIEEIIRDVDLNGDGRV 142
Query: 61 DLEDLVGLI 69
D E+ V ++
Sbjct: 143 DFEEFVRMM 151
Score = 32.7 bits (73), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 13/110 (11%)
Query: 42 LNEVEVAIESLDKDGDGFLDLEDLVGLIEGA---SAEEKLKDLREAF-----GLYDFDN- 92
+ E+ A DKD DG+++ DL + E +L +L + G DFD+
Sbjct: 10 IEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDF 69
Query: 93 RGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLSFEEFRIMMQ 142
+ P ++LA+ + + E R FD NGDG +S E R M+
Sbjct: 70 VELMGP----KLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMR 115
Score = 30.8 bits (68), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 37/66 (56%)
Query: 76 EKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLSFE 135
E++++LREAF +D D G+I+ DL + +G + E + + ++N G + F+
Sbjct: 8 EEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFD 67
Query: 136 EFRIMM 141
+F +M
Sbjct: 68 DFVELM 73
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 72/142 (50%), Gaps = 8/142 (5%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E F FD++ DG ++ ++ N M +G + +E++ + ++ + G +D +D
Sbjct: 26 ELREAFREFDKDKDGYINCRDLGNCM-RTMGYMPTEMELIELS-QQINMNLGGHVDFDDF 83
Query: 66 VGLIEGASAEEK-----LKDLREAFGLYDFDNRGFISPNDLKRMLAKL-GESKSIDECRM 119
V L+ E +K+LR+AF +D + G IS ++L+ + KL G +
Sbjct: 84 VELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEE 143
Query: 120 MIDRFDLNGDGVLSFEEFRIMM 141
+I DLNGDG + FEEF MM
Sbjct: 144 IIRDVDLNGDGRVDFEEFVRMM 165
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 1 MVKGREYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFL 60
M+ +E F FD NGDG++S SE++ M ++ G V ++E I +D +GDG +
Sbjct: 98 MIGVKELRDAFREFDTNGDGEISTSELREAMRKLL-GHQVGHRDIEEIIRDVDLNGDGRV 156
Query: 61 DLEDLVGLI 69
D E+ V ++
Sbjct: 157 DFEEFVRMM 165
Score = 33.1 bits (74), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 13/110 (11%)
Query: 42 LNEVEVAIESLDKDGDGFLDLEDLVGLIEGA---SAEEKLKDLREAF-----GLYDFDN- 92
+ E+ A DKD DG+++ DL + E +L +L + G DFD+
Sbjct: 24 IEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDF 83
Query: 93 RGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLSFEEFRIMMQ 142
+ P ++LA+ + + E R FD NGDG +S E R M+
Sbjct: 84 VELMGP----KLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMR 129
Score = 30.4 bits (67), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 37/66 (56%)
Query: 76 EKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLSFE 135
E++++LREAF +D D G+I+ DL + +G + E + + ++N G + F+
Sbjct: 22 EEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFD 81
Query: 136 EFRIMM 141
+F +M
Sbjct: 82 DFVELM 87
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 72/142 (50%), Gaps = 8/142 (5%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E F FD++ DG ++ ++ N M +G + +E++ + ++ + G +D +D
Sbjct: 12 ELREAFREFDKDKDGYINCRDLGNCM-RTMGYMPTEMELIELS-QQINMNLGGHVDFDDF 69
Query: 66 VGLIEGASAEEK-----LKDLREAFGLYDFDNRGFISPNDLKRMLAKL-GESKSIDECRM 119
V L+ E +K+LR+AF +D + G IS ++L+ + KL G +
Sbjct: 70 VELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEE 129
Query: 120 MIDRFDLNGDGVLSFEEFRIMM 141
+I DLNGDG + FEEF MM
Sbjct: 130 IIRDVDLNGDGRVDFEEFVRMM 151
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 1 MVKGREYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFL 60
M+ +E F FD NGDG++S SE++ M ++ G V ++E I +D +GDG +
Sbjct: 84 MIGVKELRDAFREFDTNGDGEISTSELREAMRKLL-GHQVGHRDIEEIIRDVDLNGDGRV 142
Query: 61 DLEDLVGLI 69
D E+ V ++
Sbjct: 143 DFEEFVRMM 151
Score = 32.7 bits (73), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 13/110 (11%)
Query: 42 LNEVEVAIESLDKDGDGFLDLEDLVGLIEGA---SAEEKLKDLREAF-----GLYDFDN- 92
+ E+ A DKD DG+++ DL + E +L +L + G DFD+
Sbjct: 10 IEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDF 69
Query: 93 RGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLSFEEFRIMMQ 142
+ P ++LA+ + + E R FD NGDG +S E R M+
Sbjct: 70 VELMGP----KLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMR 115
Score = 30.4 bits (67), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 37/66 (56%)
Query: 76 EKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLSFE 135
E++++LREAF +D D G+I+ DL + +G + E + + ++N G + F+
Sbjct: 8 EEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFD 67
Query: 136 EFRIMM 141
+F +M
Sbjct: 68 DFVELM 73
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 12/146 (8%)
Query: 5 REYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLL------NEVEVAIESLDKDGDG 58
+E +F + D+NGDG++ E+ + + G + +EV+ + + D D +G
Sbjct: 63 KELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNG 122
Query: 59 FLDLEDLVGLIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRM--LAKLGESKSIDE 116
++D + V + + L AF +D D G IS ++L + L L ESK+ E
Sbjct: 123 YIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVFGLDHL-ESKTWKE 181
Query: 117 CRMMIDRFDLNGDGVLSFEEFRIMMQ 142
MI D N DG + FEEF M+Q
Sbjct: 182 ---MISGIDSNNDGDVDFEEFCKMIQ 204
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 72/140 (51%), Gaps = 9/140 (6%)
Query: 5 REYERVFVYFDENGDGKVSPSEIKNRMGMI-VGGGDVLLNEVEVAIESLDKDGDGFLDLE 63
R + +F FD+ G G ++ + + + I + L+ ++ A SL +D L L+
Sbjct: 4 RANKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSL-RDASS-LTLD 61
Query: 64 DLVGLIE------GASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDEC 117
+ GLIE A+ + K +D +AF ++D ++ G +S DL+ ML LGE + E
Sbjct: 62 QITGLIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEV 121
Query: 118 RMMIDRFDLNGDGVLSFEEF 137
++ +++ +G + +++F
Sbjct: 122 DELLKGVEVDSNGEIDYKKF 141
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 12/146 (8%)
Query: 5 REYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLL------NEVEVAIESLDKDGDG 58
+E +F + D+NGDG++ E+ + + G + +EV+ + + D D +G
Sbjct: 346 KELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNG 405
Query: 59 FLDLEDLVGLIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRM--LAKLGESKSIDE 116
++D + V + + L AF +D D G IS ++L + L L ESK+ E
Sbjct: 406 YIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVFGLDHL-ESKTWKE 464
Query: 117 CRMMIDRFDLNGDGVLSFEEFRIMMQ 142
MI D N DG + FEEF M+Q
Sbjct: 465 ---MISGIDSNNDGDVDFEEFCKMIQ 487
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 43.1 bits (100), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 73/148 (49%), Gaps = 15/148 (10%)
Query: 5 REYERVFVYFDENGDGKVSPSEI----KNRMGMIVGGGDVLL-------NEVEVAIESLD 53
+E +F D+NGDG++ +E+ K M M G D + +EV+ ++++D
Sbjct: 335 KELTAIFHKMDKNGDGQLDRAELIEGYKELMRM--KGQDASMLDASAVEHEVDQVLDAVD 392
Query: 54 KDGDGFLDLEDLVGLIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKS 113
D +G+++ + V + + L AF ++D DN G IS +L + + + S
Sbjct: 393 FDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFG-VSDVDS 451
Query: 114 IDECRMMIDRFDLNGDGVLSFEEFRIMM 141
+ + ++ D N DG + F+EF+ M+
Sbjct: 452 -ETWKSVLSEVDKNNDGEVDFDEFQQML 478
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 43.1 bits (100), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 70/141 (49%), Gaps = 11/141 (7%)
Query: 8 ERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDLVG 67
+ F+ DE+G G ++ ++K G+ G + N ++ ++ +D DG G +D + +
Sbjct: 55 KSTFLVLDEDGKGYITKEQLKK--GLEKDGLKLPYN-FDLLLDQIDSDGSGKIDYTEFIA 111
Query: 68 L-IEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLA---KLGE--SKSIDECRMMI 121
++ +KL + AF ++D DN G I+ +L +L K G + ++ + MI
Sbjct: 112 AALDRKQLSKKL--IYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMI 169
Query: 122 DRFDLNGDGVLSFEEFRIMMQ 142
D N DG + F EF MM+
Sbjct: 170 RDVDKNNDGKIDFHEFSEMMK 190
Score = 29.3 bits (64), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 66 VGLIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFD 125
+ +I S + ++ L+ F + D D +G+I+ LK+ L K G + +++D+ D
Sbjct: 39 MTIIAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLPYN-FDLLLDQID 97
Query: 126 LNGDGVLSFEEF 137
+G G + + EF
Sbjct: 98 SDGSGKIDYTEF 109
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 43.1 bits (100), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 73/148 (49%), Gaps = 15/148 (10%)
Query: 5 REYERVFVYFDENGDGKVSPSEI----KNRMGMIVGGGDVLL-------NEVEVAIESLD 53
+E +F D+NGDG++ +E+ K M M G D + +EV+ ++++D
Sbjct: 359 KELTAIFHKMDKNGDGQLDRAELIEGYKELMRM--KGQDASMLDASAVEHEVDQVLDAVD 416
Query: 54 KDGDGFLDLEDLVGLIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKS 113
D +G+++ + V + + L AF ++D DN G IS +L + + + S
Sbjct: 417 FDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFG-VSDVDS 475
Query: 114 IDECRMMIDRFDLNGDGVLSFEEFRIMM 141
+ + ++ D N DG + F+EF+ M+
Sbjct: 476 -ETWKSVLSEVDKNNDGEVDFDEFQQML 502
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 73/148 (49%), Gaps = 15/148 (10%)
Query: 5 REYERVFVYFDENGDGKVSPSEI----KNRMGMIVGGGDVLL-------NEVEVAIESLD 53
+E +F D+NGDG++ +E+ K M M G D + +EV+ ++++D
Sbjct: 358 KELTAIFHKMDKNGDGQLDRAELIEGYKELMRM--KGQDASMLDASAVEHEVDQVLDAVD 415
Query: 54 KDGDGFLDLEDLVGLIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKS 113
D +G+++ + V + + L AF ++D DN G IS +L + + + S
Sbjct: 416 FDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFG-VSDVDS 474
Query: 114 IDECRMMIDRFDLNGDGVLSFEEFRIMM 141
+ + ++ D N DG + F+EF+ M+
Sbjct: 475 -ETWKSVLSEVDKNNDGEVDFDEFQQML 501
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 42.7 bits (99), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
+EE + + + AF ++D D G IS +L ++ LG++ + E +I D +G G +
Sbjct: 15 SEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTID 74
Query: 134 FEEFRIMM 141
FEEF +MM
Sbjct: 75 FEEFLVMM 82
Score = 32.7 bits (73), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E++ F FD +G G +S E+ M M+ G + E++ I +D+DG G +D E+
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRML--GQNPTKCELDAIICEVDEDGSGTIDFEEF 78
Query: 66 VGLI 69
+ ++
Sbjct: 79 LVMM 82
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 42.7 bits (99), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 55/111 (49%)
Query: 32 GMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDLVGLIEGASAEEKLKDLREAFGLYDFD 91
+I G + ++++ + LD DG G ++ + + + + + AF ++D D
Sbjct: 370 SLIQNEGSTIEDQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKD 429
Query: 92 NRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLSFEEFRIMMQ 142
G IS +L ++ ++ S ++E +I++ D N DG + F EF M+Q
Sbjct: 430 GSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQ 480
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 74 AEEKLKDLREAFGLYDFDNR-GFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVL 132
EE+ + + AF ++ D G IS +L +++ LG++ + +E + MID D +G G +
Sbjct: 13 TEEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTV 72
Query: 133 SFEEFRIMM 141
F+EF +MM
Sbjct: 73 DFDEFLVMM 81
Score = 25.8 bits (55), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 3 KGREYERVF-VYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLD 61
+ E++ F ++ + DG +S E+ M M+ G + E++ I+ +D+DG G +D
Sbjct: 16 QKNEFKAAFDIFIQDAEDGCISTKELGKVMRML--GQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 62 LEDLVGLI 69
++ + ++
Sbjct: 74 FDEFLVMM 81
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 13/130 (10%)
Query: 10 VFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEV--AIESLDKDGDGFLDLEDLVG 67
VF D++ G +S +E++ + G N V V I D++ ++ + G
Sbjct: 9 VFQRVDKDRSGVISDTELQQALS---NGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 65
Query: 68 LIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLN 127
+ + + D + F YD DN G I N+LK+ L+ S + ++I +FD
Sbjct: 66 VWK------YITDWQNVFRTYDRDNSGMIDKNELKQALSGYRLSDQFHD--ILIRKFDRQ 117
Query: 128 GDGVLSFEEF 137
G G ++F++F
Sbjct: 118 GRGQIAFDDF 127
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 70 EGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGD 129
E S EE LK AF L+D DN G I+ DL+R+ +LGE+ + +E + MI D N D
Sbjct: 4 ERDSREEILK----AFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDD 59
Query: 130 GVLSFEEF-RIMMQ 142
+ +EF RIM +
Sbjct: 60 NEIDEDEFIRIMKK 73
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
EE+ +++REAF L+D D G I +LK + LG +E + MI D G G ++
Sbjct: 26 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMN 85
Query: 134 FEEFRIMM 141
F +F +M
Sbjct: 86 FGDFLTVM 93
Score = 26.6 bits (57), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 5 REYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLED 64
+E F FD +G G + E+K + M G + E++ I +DK+G G ++ D
Sbjct: 31 QEIREAFDLFDADGTGTIDVKELK--VAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGD 88
Query: 65 LVGLI 69
+ ++
Sbjct: 89 FLTVM 93
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 4/134 (2%)
Query: 10 VFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDLVGLI 69
+F+ D + G +S EI + + I G + ++ + +D + G + D +
Sbjct: 62 IFIALDVDNSGTLSSQEILDGLKKI--GYQKIPPDIHQVLRDIDSNASGQIHYTDFLAAT 119
Query: 70 EGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLG-ESKSIDEC-RMMIDRFDLN 127
K + F +D D G IS +LKR+ + E+ ID+ ++ DLN
Sbjct: 120 IDKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLN 179
Query: 128 GDGVLSFEEFRIMM 141
GDG + F EF +MM
Sbjct: 180 GDGEIDFHEFMLMM 193
Score = 29.6 bits (65), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 33/72 (45%)
Query: 66 VGLIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFD 125
+ +I + ++ +LR F D DN G +S ++ L K+G K + ++ D
Sbjct: 44 LTIIAKHLCDVEINNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDID 103
Query: 126 LNGDGVLSFEEF 137
N G + + +F
Sbjct: 104 SNASGQIHYTDF 115
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Query: 44 EVEVAIESLDKDGDGFLDLEDLVGLIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKR 103
++ + D + DGF+D + + + E+ + L+ F LYD D G I N+L
Sbjct: 58 HIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLD 117
Query: 104 MLAKL-----GESKSIDE-CRMMIDRFDLNGDGVLSFEEF 137
M + ++ S +E ++ + D+N DG L+ EEF
Sbjct: 118 MFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEF 157
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 52 LDKDGDGFLDLEDLVGLIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLA----- 106
DKD +GF+ E+ + ++ S + L AF LYD ++ G+I+ +++ ++A
Sbjct: 72 FDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKM 131
Query: 107 -----KLGESKSIDECRM--MIDRFDLNGDGVLSFEEFR 138
L E ++ E R+ + D N DG ++ +EFR
Sbjct: 132 MGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFR 170
Score = 31.2 bits (69), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 27/52 (51%)
Query: 85 FGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLSFEE 136
F ++D DN GFI + +L+ ++ + +DLN DG ++F+E
Sbjct: 69 FTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDE 120
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 69/135 (51%), Gaps = 8/135 (5%)
Query: 10 VFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDLVGLI 69
+F D + G ++ E+K+ + + G +++ +E++ +++ D D G +D + +
Sbjct: 15 LFKMIDTDNSGTITFDELKDGLKRV--GSELMESEIKDLMDAADIDKSGTIDYGEFIAAT 72
Query: 70 EGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRM--MIDRFDLN 127
+ E+ ++L AF +D D G+I+ +++++ G +D+ + MI D +
Sbjct: 73 VHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFG----LDDIHIDDMIKEIDQD 128
Query: 128 GDGVLSFEEFRIMMQ 142
DG + + EF MM+
Sbjct: 129 NDGQIDYGEFAAMMR 143
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
+EE++ L+E F + D DN G I+ ++LK L ++G E + ++D D++ G +
Sbjct: 5 SEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTID 64
Query: 134 FEEF 137
+ EF
Sbjct: 65 YGEF 68
Score = 30.4 bits (67), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 16/90 (17%)
Query: 10 VFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEV--AIESLDKDGDGFLDLEDLVG 67
F YFD++G G ++ EI+ D L+++ + I+ +D+D DG +D +
Sbjct: 87 AFSYFDKDGSGYITLDEIQQAC------KDFGLDDIHIDDMIKEIDQDNDGQIDYGEFAA 140
Query: 68 LIE--------GASAEEKLKDLREAFGLYD 89
++ G K +LR+A GL D
Sbjct: 141 MMRKRKGNGGIGRRTMRKTLNLRDALGLVD 170
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 74/161 (45%), Gaps = 29/161 (18%)
Query: 1 MVKGREYERVFVYFDENGDGKVSPSEIKNRMGMIVG----GGDVLLNEVEVAIESLDKDG 56
++ ++ ++++FD +G G + E++N + ++ G L E++ ++ +
Sbjct: 12 LITASQFFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQRD 71
Query: 57 DGFLDLEDLVGLIEG-------------ASAEEKLKDLREAFGLYDFDNRGFISPNDLKR 103
DG + + +L ++ S EE +K R+ YD D+ GFI +LK
Sbjct: 72 DGKIGIVELAHVLPTEENFLLLFRCQQLKSCEEFMKTWRK----YDTDHSGFIETEELKN 127
Query: 104 MLAKLGE--SKSIDECR------MMIDRFDLNGDGVLSFEE 136
L L E +K++D+ + +M+ FD N DG L E
Sbjct: 128 FLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTE 168
Score = 34.3 bits (77), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 57/122 (46%), Gaps = 20/122 (16%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVA------IESLDKDGDGF 59
E+ + + +D + G + E+KN + ++ + +++ ++A ++ D + DG
Sbjct: 104 EFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGK 163
Query: 60 LDLEDLVGLIEGASAEEKL-----------KDLREAFGLYDFDNRGFISPNDLKRMLAKL 108
L+L ++ L+ +E K+ +AF LYD D G+I N+L +L L
Sbjct: 164 LELTEMARLL---PVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLKDL 220
Query: 109 GE 110
E
Sbjct: 221 CE 222
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 68/153 (44%), Gaps = 26/153 (16%)
Query: 5 REYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLN-------------EVEVAIES 51
+E +F D+NGDG++ E ++ G +VL N EV+ ++
Sbjct: 355 KELTDIFKKLDKNGDGQLDKKE-------LIEGYNVLRNFKNELGELKNVEEEVDNILKE 407
Query: 52 LDKDGDGFLDLEDLVGLIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRM--LAKLG 109
+D D +G+++ + + + + LR AF L+D D G I+ +L + L +
Sbjct: 408 VDFDKNGYIEYSEFISVCMDKQILFSEERLRRAFNLFDTDKSGKITKEELANLFGLTSIS 467
Query: 110 ESKSIDECRMMIDRFDLNGDGVLSFEEFRIMMQ 142
E D ++ D N D ++ F+EF MM
Sbjct: 468 EKTWND----VLGEADQNKDNMIDFDEFVSMMH 496
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 40.8 bits (94), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 13/144 (9%)
Query: 5 REYERVFVYFDENGDGKVSPSEI-------KNRMGMIVGGGDV--LLNEVEVAIESLDKD 55
+E +F D+NGDG++ +E+ G D + +EV+ ++++D D
Sbjct: 335 KELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEVDQVLDAVDFD 394
Query: 56 GDGFLDLEDLVGLIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSID 115
+G+++ + V + + L AF +D DN G IS +L + G S
Sbjct: 395 KNGYIEYSEFVTVAXDRKTLLSRERLERAFRXFDSDNSGKISSTELATI---FGVSDVDS 451
Query: 116 EC-RMMIDRFDLNGDGVLSFEEFR 138
E + ++ D N DG + F+EF+
Sbjct: 452 ETWKSVLSEVDKNNDGEVDFDEFQ 475
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 89
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 74 AEEKLKDLREAFGLYDFDNR-GFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVL 132
EE+ + + AF ++ G IS +L +++ LG++ + +E + MID D +G G +
Sbjct: 13 TEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTV 72
Query: 133 SFEEFRIMM 141
F+EF +MM
Sbjct: 73 DFDEFLVMM 81
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 74 AEEKLKDLREAFGLYDFDNR-GFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVL 132
EE+ + + AF ++ G IS +L +++ LG++ + +E + MID D +G G +
Sbjct: 13 TEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTV 72
Query: 133 SFEEFRIMM 141
F+EF +MM
Sbjct: 73 DFDEFLVMM 81
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 74 AEEKLKDLREAFGLYDFDNR-GFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVL 132
EE+ + + AF ++ G IS +L +++ LG++ + +E + MID D +G G +
Sbjct: 13 TEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTV 72
Query: 133 SFEEFRIMM 141
F+EF +MM
Sbjct: 73 DFDEFLVMM 81
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 43 NEVEVAIESLDKDGDGFLDLEDLVGLIEGASAEEK--LKDLREAFGLYDFDNRGFISPND 100
NE A+ K G+ L E+ + EG E+ D EAF +D + +GFIS +
Sbjct: 47 NEDVFAVGGTHKMGEKSLPFEEFLPAYEGLMDCEQGTYADYMEAFKTFDREGQGFISGAE 106
Query: 101 LKRMLAKLGESKSIDECRMMIDRFDLNGD--GVLSFEEF 137
L+ +L+ LGE S +E +I+ DL D G + +EEF
Sbjct: 107 LRHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYEEF 145
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 1 MVKGREYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFL 60
M+ +E F FD NGDG++S SE++ M ++ G V ++E I +D +GDG +
Sbjct: 3 MIGVKELRDAFREFDTNGDGEISTSELREAMRKLL-GHQVGHRDIEEIIRDVDLNGDGRV 61
Query: 61 DLEDLVGLI 69
D E+ V ++
Sbjct: 62 DFEEFVRMM 70
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 78 LKDLREAFGLYDFDNRGFISPNDLKRMLAKL-GESKSIDECRMMIDRFDLNGDGVLSFEE 136
+K+LR+AF +D + G IS ++L+ + KL G + +I DLNGDG + FEE
Sbjct: 6 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 65
Query: 137 FRIMMQ 142
F MM
Sbjct: 66 FVRMMS 71
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac Troponin-I(147-
163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain Of
Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 74 AEEKLKDLREAFGLYDFDNR-GFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVL 132
EE+ + + AF ++ G IS +L +++ LG++ + +E + MID D +G G +
Sbjct: 13 TEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTV 72
Query: 133 SFEEFRIMM 141
F+EF +MM
Sbjct: 73 DFDEFLVMM 81
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin C
At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 74 AEEKLKDLREAFGLYDFDNR-GFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVL 132
+E+ + + AF ++ D G IS +L +++ LG++ + +E + MID D +G G +
Sbjct: 13 TDEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTV 72
Query: 133 SFEEFRIMM 141
F+EF +MM
Sbjct: 73 DFDEFLVMM 81
Score = 25.8 bits (55), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 3 KGREYERVF-VYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLD 61
+ E++ F ++ + DG +S E+ M M+ G + E++ I+ +D+DG G +D
Sbjct: 16 QKNEFKAAFDIFIQDAEDGCISTKELGKVMRML--GQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 62 LEDLVGLI 69
++ + ++
Sbjct: 74 FDEFLVMM 81
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 43 NEVEVAIESLDKDGDGFLDLEDLVGLIEGASAEEK--LKDLREAFGLYDFDNRGFISPND 100
NE A+ K G+ L E+ + EG E+ D EAF +D + +GFIS +
Sbjct: 46 NEDVFAVGGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAE 105
Query: 101 LKRMLAKLGESKSIDECRMMIDRFDLNGD--GVLSFEEF 137
L+ +L+ LGE S +E +I+ DL D G + +EEF
Sbjct: 106 LRHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYEEF 144
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 43 NEVEVAIESLDKDGDGFLDLEDLVGLIEGASAEEK--LKDLREAFGLYDFDNRGFISPND 100
NE A+ K G+ L E+ + EG E+ D EAF +D + +GFIS +
Sbjct: 46 NEDVFAVGGTHKMGEKSLPFEEFLPAYEGLMDCEQGTYADYMEAFKTFDREGQGFISGAE 105
Query: 101 LKRMLAKLGESKSIDECRMMIDRFDLNGD--GVLSFEEF 137
L+ +L+ LGE S +E +I+ DL D G + +EEF
Sbjct: 106 LRHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYEEF 144
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 74 AEEKLKDLREAFGLY-DFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVL 132
EE+ + + AF ++ G IS +L +++ LG++ + +E + MID D +G G +
Sbjct: 13 TEEQKNEFKAAFDIFVQGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTV 72
Query: 133 SFEEFRIMM 141
F+EF +MM
Sbjct: 73 DFDEFLVMM 81
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 74 AEEKLKDLREAFGLYDFDNR-GFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVL 132
EE+ + + AF ++ G IS +L +++ LG++ + +E + MID D +G G +
Sbjct: 13 TEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTV 72
Query: 133 SFEEFRIMM 141
F+E+ +MM
Sbjct: 73 DFDEWLVMM 81
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 67/137 (48%), Gaps = 5/137 (3%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMI-VGGGDVLLNEVEVAIESLDKDGDGFLDLED 64
+ + F FD++ DGKVS E+ + + + + LN ++ + + + D F
Sbjct: 6 QIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNAKEFDLATF----K 61
Query: 65 LVGLIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRF 124
V + E+ K++ +AF D + G I +L+++L LG++ + E ++
Sbjct: 62 TVYRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEV 121
Query: 125 DLNGDGVLSFEEFRIMM 141
++GDG +++E F M+
Sbjct: 122 SVSGDGAINYESFVDML 138
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 74 AEEKLKDLREAFGLYDFDNR-GFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVL 132
EE+ + + AF ++ G IS +L +++ LG++ + +E + MID D +G G +
Sbjct: 13 TEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTV 72
Query: 133 SFEEFRIMM 141
F+E+ +MM
Sbjct: 73 DFDEWLVMM 81
>pdb|1QX2|A Chain A, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
pdb|1QX2|B Chain B, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
Length = 76
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGES--KSIDECRMMIDRFDLNGDGV 131
+ E++K E F + D IS +LK ++ LG S K + MI+ D NGDG
Sbjct: 3 SPEEIKGAFEVFAAKEGDPNQ-ISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGE 61
Query: 132 LSFEEFRIMMQ 142
+SFEEF +MM+
Sbjct: 62 VSFEEFLVMMK 72
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 16/101 (15%)
Query: 52 LDKDGDGFLDLEDLVGLIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRML------ 105
D++ DG ++ + + + S + LR AF LYD DN G+I+ N++ ++
Sbjct: 72 FDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQM 131
Query: 106 ----AKLGESKSIDECRMMIDRF----DLNGDGVLSFEEFR 138
+L E ++ E R +DR D N DG L+ +EF+
Sbjct: 132 VGNTVELPEEENTPEKR--VDRIFAMMDKNADGKLTLQEFQ 170
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 11/72 (15%)
Query: 44 EVEVAIESLDKDGDGFLDLEDLVGLIEGASAEEKLKD------LREAFGLYDFDNRGFIS 97
E++ I +D DG+G +D + + ++ K+KD +REAF ++D D G+IS
Sbjct: 2 ELQDMINEVDADGNGTIDFPEFLTMMA-----RKMKDTDSEEEIREAFRVFDKDGNGYIS 56
Query: 98 PNDLKRMLAKLG 109
+L+ ++ LG
Sbjct: 57 AAELRHVMTNLG 68
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%)
Query: 75 EEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLSF 134
++++ + +EAF L+D + GFI+ L+ +L + G M + D G+G + F
Sbjct: 2 DDQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQF 61
Query: 135 EEFRIMM 141
EF MM
Sbjct: 62 PEFLSMM 68
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 43 NEVEVAIESLDKDGDGFLDLEDLVGLIEGASAEEK--LKDLREAFGLYDFDNRGFISPND 100
NE A+ K G+ L E+ + EG E+ D EAF +D + +GFIS +
Sbjct: 46 NEDVFAVGGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAE 105
Query: 101 LKRMLAKLGESKSIDECRMMIDRFDLNGD--GVLSFEEF 137
L+ +L LGE S ++ +I DL D G + +E+F
Sbjct: 106 LRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDF 144
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 43 NEVEVAIESLDKDGDGFLDLEDLVGLIEGASAEEK--LKDLREAFGLYDFDNRGFISPND 100
NE A+ K G+ L E+ + EG E+ D EAF +D + +GFIS +
Sbjct: 46 NEDVFAVGGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAE 105
Query: 101 LKRMLAKLGESKSIDECRMMIDRFDLNGD--GVLSFEEF 137
L+ +L LGE S ++ +I DL D G + +E+F
Sbjct: 106 LRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDF 144
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Query: 13 YFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDLVGLIEGA 72
+ E G+++ E + D V S D + DG LD ++ V +
Sbjct: 34 FLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHV-FRSFDANSDGTLDFKEYVIALHMT 92
Query: 73 SAEEKLKDLREAFGLYDFDNRGFISPNDL 101
SA + + L AF LYD D G IS N++
Sbjct: 93 SAGKTNQKLEWAFSLYDVDGNGTISKNEV 121
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 43 NEVEVAIESLDKDGDGFLDLEDLVGLIEGASAEEK--LKDLREAFGLYDFDNRGFISPND 100
NE A+ K G+ L E+ + EG E+ D EAF +D + +GFIS +
Sbjct: 43 NEDVFAVGGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAE 102
Query: 101 LKRMLAKLGESKSIDECRMMIDRFDLNGD--GVLSFEEF 137
L+ +L LGE S ++ +I DL D G + +E+F
Sbjct: 103 LRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDF 141
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Query: 13 YFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDLVGLIEGA 72
+ E G+++ E + D V S D + DG LD ++ V +
Sbjct: 35 FLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHV-FRSFDANSDGTLDFKEYVIALHMT 93
Query: 73 SAEEKLKDLREAFGLYDFDNRGFISPNDL 101
SA + + L AF LYD D G IS N++
Sbjct: 94 SAGKTNQKLEWAFSLYDVDGNGTISKNEV 122
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Query: 13 YFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDLVGLIEGA 72
+ E G+++ E + D V S D + DG LD ++ V +
Sbjct: 34 FLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHV-FRSFDANSDGTLDFKEYVIALHMT 92
Query: 73 SAEEKLKDLREAFGLYDFDNRGFISPNDL 101
SA + + L AF LYD D G IS N++
Sbjct: 93 SAGKTNQKLEWAFSLYDVDGNGTISKNEV 121
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 43 NEVEVAIESLDKDGDGFLDLEDLVGLIEGASAEEK--LKDLREAFGLYDFDNRGFISPND 100
NE A+ K G+ L E+ + EG E+ D EAF +D + +GFIS +
Sbjct: 44 NEDVFAVGGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAE 103
Query: 101 LKRMLAKLGESKSIDECRMMIDRFDLNGD--GVLSFEEF 137
L+ +L LGE S ++ +I DL D G + +E+F
Sbjct: 104 LRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDF 142
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 43 NEVEVAIESLDKDGDGFLDLEDLVGLIEGASAEEK--LKDLREAFGLYDFDNRGFISPND 100
NE A+ K G+ L E+ + EG E+ D EAF +D + +GFIS +
Sbjct: 43 NEDVFAVGGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAE 102
Query: 101 LKRMLAKLGESKSIDECRMMIDRFDLNGD--GVLSFEEF 137
L+ +L LGE S ++ +I DL D G + +E+F
Sbjct: 103 LRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDF 141
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Query: 13 YFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDLVGLIEGA 72
+ E G+++ E + D V S D + DG LD ++ V +
Sbjct: 34 FLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHV-FRSFDANSDGTLDFKEYVIALHMT 92
Query: 73 SAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKL 108
SA + + L AF LYD D G IS N++ ++ +
Sbjct: 93 SAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAI 128
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 43 NEVEVAIESLDKDGDGFLDLEDLVGLIEGASAEEK--LKDLREAFGLYDFDNRGFISPND 100
NE A+ K G+ L E+ + EG E+ D EAF +D + +GFIS +
Sbjct: 46 NEDVFAVGGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAE 105
Query: 101 LKRMLAKLGESKSIDECRMMIDRFDLNGD--GVLSFEEF 137
L+ +L LGE S ++ +I DL D G + +E+F
Sbjct: 106 LRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDF 144
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 18/102 (17%)
Query: 51 SLDKDGDGFLDLEDLV---GLIEGASAEEKLKDLREAFGLYDFDNRGFISPNDL------ 101
+ D DG+G + ED V ++ + EKLK AF LYD + G I+ ++
Sbjct: 137 AFDADGNGAIHFEDFVVGLSILLRGTVHEKLK---WAFNLYDINKDGCITKEEMLAIMKS 193
Query: 102 ------KRMLAKLGESKSIDECRMMIDRFDLNGDGVLSFEEF 137
+ L E ++ + D N DGV++ +EF
Sbjct: 194 IYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEF 235
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 40/68 (58%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
+EE+ ++++EAF L+D + G I ++LK + LG E +++ +D G+G +
Sbjct: 2 SEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIG 61
Query: 134 FEEFRIMM 141
F++F +M
Sbjct: 62 FDDFLDIM 69
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
Query: 13 YFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDLVGLIEGA 72
+ E G+++ E + D V S D + DG LD + V +
Sbjct: 34 FLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHV-FRSFDANSDGTLDFKQYVIALHMT 92
Query: 73 SAEEKLKDLREAFGLYDFDNRGFISPNDL 101
SA + + L AF LYD D G IS N++
Sbjct: 93 SAGKTNQKLEWAFSLYDVDGNGTISKNEV 121
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
Query: 13 YFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDLVGLIEGA 72
+ E G+++ E + D V S D + DG LD + V +
Sbjct: 34 FLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHV-FRSFDANSDGTLDFKQYVIALHMT 92
Query: 73 SAEEKLKDLREAFGLYDFDNRGFISPNDL 101
SA + + L AF LYD D G IS N++
Sbjct: 93 SAGKTNQKLEWAFSLYDVDGNGTISKNEV 121
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 36.2 bits (82), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 39/72 (54%)
Query: 51 SLDKDGDGFLDLEDLVGLIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGE 110
S D + DG LD ++ V + +A + + L AF LYD D G IS N++ ++ + +
Sbjct: 79 SFDSNLDGTLDFKEYVIALHXTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVXAIFK 138
Query: 111 SKSIDECRMMID 122
+ ++ +++ D
Sbjct: 139 XITPEDVKLLPD 150
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 36.2 bits (82), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
+EE++ L+E F + D DN G I+ ++LK L ++G E + ++D D++ G +
Sbjct: 18 SEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTID 77
Query: 134 FEEF 137
+ EF
Sbjct: 78 YGEF 81
>pdb|2OS8|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
++++++++EAF + D + GFI NDLK M + LG + E M+ G L+
Sbjct: 14 PQKQIQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKE----APGPLN 69
Query: 134 FEEF 137
F F
Sbjct: 70 FTMF 73
Score = 26.9 bits (58), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 64/142 (45%), Gaps = 14/142 (9%)
Query: 5 REYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLED 64
+E + F D+N DG + +++K + D + + ++ K+ G L+
Sbjct: 19 QEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPD------DKELTAMLKEAPGPLNFTM 72
Query: 65 LVGL----IEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMM 120
+ + + G +EE + R AFG++D + ++ +K +L +G++ + DE RM
Sbjct: 73 FLSIFSDKLSGTDSEETI---RNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMRMT 129
Query: 121 IDRFDLNGDGVLSFEEFRIMMQ 142
+ G G + F M++
Sbjct: 130 FKEAPVEG-GKFDYVRFVAMIK 150
>pdb|2JJZ|A Chain A, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
Length = 150
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%)
Query: 76 EKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLSFE 135
EKL +E + +D +N G I LKRM+ KLG K+ E + MI +S+
Sbjct: 47 EKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYR 106
Query: 136 EFRIMM 141
+F MM
Sbjct: 107 DFVNMM 112
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 9 RVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDLVGL 68
R F FD NGDG + E K M VG + EVE A++ D+DG+G +D+ + + L
Sbjct: 12 RAFKVFDANGDGVIDFDEFKFIMQK-VGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDL 70
Query: 69 IEGAS 73
I+ +
Sbjct: 71 IKKSK 75
Score = 31.6 bits (70), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 12/19 (63%), Positives = 16/19 (84%)
Query: 124 FDLNGDGVLSFEEFRIMMQ 142
FD NGDGV+ F+EF+ +MQ
Sbjct: 17 FDANGDGVIDFDEFKFIMQ 35
>pdb|2JJZ|B Chain B, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2JJZ|C Chain C, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2JJZ|D Chain D, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2VTG|A Chain A, Crystal Structure Of Human Iba2, Trigonal Crystal Form
Length = 150
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%)
Query: 76 EKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLSFE 135
EKL +E + +D +N G I LKRM+ KLG K+ E + MI +S+
Sbjct: 47 EKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYR 106
Query: 136 EFRIMM 141
+F MM
Sbjct: 107 DFVNMM 112
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMI 121
++ ++++L+EAF + D D GFI DLK M + LG DE M+
Sbjct: 11 SQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAML 58
Score = 32.7 bits (73), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 57/115 (49%), Gaps = 7/115 (6%)
Query: 5 REYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLED 64
+E + F D++ DG + ++K+ M G V ++ + ++ K+ G L+
Sbjct: 16 QELKEAFTMIDQDRDGFIGMEDLKD---MFSSLGRVPPDD---ELNAMLKECPGQLNFTA 69
Query: 65 LVGLI-EGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECR 118
+ L E S + LR AF ++D D +GFI + LK +L +G++ S +E +
Sbjct: 70 FLTLFGEKVSGTDPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIK 124
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 72 ASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGV 131
+EE+L DL F ++D + G+I ++LK ML GE+ + D+ ++ D N DG
Sbjct: 2 GKSEEELSDL---FRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGR 58
Query: 132 LSFEEFRIMMQ 142
+ ++EF M+
Sbjct: 59 IDYDEFLEFMK 69
Score = 26.9 bits (58), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E +F FD+N DG + E+K + + G + +++E ++ DK+ DG +D ++
Sbjct: 7 ELSDLFRMFDKNADGYIDLDELK--IMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 64
Query: 66 VGLIEGA 72
+ ++G
Sbjct: 65 LEFMKGV 71
>pdb|1U5I|A Chain A, Crystal Structure Analysis Of Rat M-Calpain Mutant Lys10
Thr
Length = 700
Score = 35.4 bits (80), Expect = 0.011, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 28/44 (63%), Gaps = 4/44 (9%)
Query: 101 LKRMLAKLGESKS----IDECRMMIDRFDLNGDGVLSFEEFRIM 140
L+R+LAK + KS I+ C++M+D D +G G L +EF I+
Sbjct: 557 LRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYIL 600
>pdb|1KFX|L Chain L, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|L Chain L, Crystal Structure Of Human M-Calpain Form Ii
Length = 699
Score = 35.4 bits (80), Expect = 0.011, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 28/44 (63%), Gaps = 4/44 (9%)
Query: 101 LKRMLAKLGESKS----IDECRMMIDRFDLNGDGVLSFEEFRIM 140
L+R+LAK + KS I+ C++M+D D +G G L +EF I+
Sbjct: 556 LRRVLAKRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYIL 599
>pdb|3DF0|A Chain A, Calcium-Dependent Complex Between M-Calpain And
Calpastatin
pdb|3BOW|A Chain A, Structure Of M-Calpain In Complex With Calpastatin
Length = 714
Score = 35.4 bits (80), Expect = 0.011, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 28/44 (63%), Gaps = 4/44 (9%)
Query: 101 LKRMLAKLGESKS----IDECRMMIDRFDLNGDGVLSFEEFRIM 140
L+R+LAK + KS I+ C++M+D D +G G L +EF I+
Sbjct: 557 LRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYIL 600
>pdb|1DF0|A Chain A, Crystal Structure Of M-Calpain
Length = 700
Score = 35.4 bits (80), Expect = 0.011, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 28/44 (63%), Gaps = 4/44 (9%)
Query: 101 LKRMLAKLGESKS----IDECRMMIDRFDLNGDGVLSFEEFRIM 140
L+R+LAK + KS I+ C++M+D D +G G L +EF I+
Sbjct: 557 LRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYIL 600
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 35.0 bits (79), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 72 ASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGV 131
+EE+L DL F ++D + G+I +LK ML GE+ + D+ ++ D N DG
Sbjct: 3 GKSEEELSDL---FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGR 59
Query: 132 LSFEEFRIMMQ 142
+ ++EF M+
Sbjct: 60 IDYDEFLEFMK 70
Score = 27.3 bits (59), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 2 VKGREYERV---FVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDG 58
+KG+ E + F FD+N DG + E+K + + G + +++E ++ DK+ DG
Sbjct: 1 MKGKSEEELSDLFRMFDKNADGYIDLEELK--IMLQATGETITEDDIEELMKDGDKNNDG 58
Query: 59 FLDLEDLVGLIEGA 72
+D ++ + ++G
Sbjct: 59 RIDYDEFLEFMKGV 72
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 35.0 bits (79), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 73 SAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVL 132
+EE+L DL F ++D + G+I +LK ML GE+ + D+ ++ D N DG +
Sbjct: 2 KSEEELSDL---FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRI 58
Query: 133 SFEEFRIMMQ 142
++EF M+
Sbjct: 59 DYDEFLEFMK 68
Score = 26.9 bits (58), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 10 VFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDLVGLI 69
+F FD+N DG + E+K + + G + +++E ++ DK+ DG +D ++ + +
Sbjct: 10 LFRMFDKNADGYIDLEELK--IMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 67
Query: 70 EGA 72
+G
Sbjct: 68 KGV 70
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 34.7 bits (78), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 72 ASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGV 131
EE+L DL F ++D + G+I +LK ML GE+ + D+ ++ D N DG
Sbjct: 6 GKTEEELSDL---FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGR 62
Query: 132 LSFEEFRIMMQ 142
+ ++EF M+
Sbjct: 63 IDYDEFLEFMK 73
Score = 26.9 bits (58), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E +F FD+N DG + E+K + + G + +++E ++ DK+ DG +D ++
Sbjct: 11 ELSDLFRMFDKNADGYIDLEELK--IMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 68
Query: 66 VGLIEGA 72
+ ++G
Sbjct: 69 LEFMKGV 75
>pdb|2PVB|A Chain A, Pike Parvalbumin (Pi 4.10) At Low Temperature (100k) And
Atomic Resolution (0.91 A).
pdb|3PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PVB|A Chain A, X-Ray Structure Of A New Crystal Form Of Pike 4.10
Parvalbumin
pdb|2PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|4PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
Length = 108
Score = 34.7 bits (78), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESK---SIDECRMMIDRFDLNGDG 130
A + L D+++AF + D D GFI ++LK L S + E + + D +GDG
Sbjct: 36 ASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDG 95
Query: 131 VLSFEEFRIMMQ 142
++ +EF M++
Sbjct: 96 MIGVDEFAAMIK 107
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 34.3 bits (77), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 73 SAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVL 132
EE+L DL F ++D + G+I +LK ML GE+ + D+ ++ D N DG +
Sbjct: 12 KTEEELSDL---FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRI 68
Query: 133 SFEEFRIMMQ 142
++EF M+
Sbjct: 69 DYDEFLEFMK 78
Score = 27.3 bits (59), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
E +F FD+N DG + E+K + + G + +++E ++ DK+ DG +D ++
Sbjct: 16 ELSDLFRMFDKNADGYIDLEELK--IMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 73
Query: 66 VGLIEGA 72
+ ++G
Sbjct: 74 LEFMKGV 80
Score = 26.2 bits (56), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 103 RMLAKLGESKSIDECRMMIDRFDLNGDGVLSFEEFRIMMQ 142
R + + K+ +E + FD N DG + EE +IM+Q
Sbjct: 3 RCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQ 42
>pdb|3PN7|B Chain B, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|E Chain E, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|B Chain B, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|E Chain E, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
Length = 161
Score = 34.3 bits (77), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 78 LKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLSFEEF 137
+++++EAF + D + GFI NDLK M + LG + E M+ G L+F F
Sbjct: 22 MQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKE----APGPLNFTMF 77
Score = 26.6 bits (57), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 64/142 (45%), Gaps = 14/142 (9%)
Query: 5 REYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLED 64
+E + F D+N DG + +++K + D + + ++ K+ G L+
Sbjct: 23 QEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPD------DKELTAMLKEAPGPLNFTM 76
Query: 65 LVGL----IEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMM 120
+ + + G +EE + R AFG++D + ++ +K +L +G++ + DE RM
Sbjct: 77 FLSIFSDKLSGTDSEETI---RNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMRMT 133
Query: 121 IDRFDLNGDGVLSFEEFRIMMQ 142
+ G G + F M++
Sbjct: 134 FKEAPVEG-GKFDYVRFVAMIK 154
>pdb|3TUY|B Chain B, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|E Chain E, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 161
Score = 34.3 bits (77), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 78 LKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLSFEEF 137
+++++EAF + D + GFI NDLK M + LG + E M+ G L+F F
Sbjct: 22 MQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKE----APGPLNFTMF 77
Score = 26.9 bits (58), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 64/142 (45%), Gaps = 14/142 (9%)
Query: 5 REYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLED 64
+E + F D+N DG + +++K + D + + ++ K+ G L+
Sbjct: 23 QEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPD------DKELTAMLKEAPGPLNFTM 76
Query: 65 LVGL----IEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMM 120
+ + + G +EE + R AFG++D + ++ +K +L +G++ + DE RM
Sbjct: 77 FLSIFSDKLSGTDSEETI---RNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMRMT 133
Query: 121 IDRFDLNGDGVLSFEEFRIMMQ 142
+ G G + F M++
Sbjct: 134 FKEAPVEG-GKFDYVRFVAMIK 154
>pdb|1DFK|Y Chain Y, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Y Chain Y, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|W Chain W, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 139
Score = 33.9 bits (76), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
++++++++EAF + D D GF+S D+K + +LG + E M+ G L+
Sbjct: 2 PQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE----APGPLN 57
Query: 134 FEEF 137
F F
Sbjct: 58 FTMF 61
>pdb|2KYC|A Chain A, Solution Structure Of Ca-Free Chicken Parvalbumin 3 (Cpv3)
pdb|2KYF|A Chain A, Solution Structure Of Calcium-Bound Cpv3
Length = 108
Score = 33.9 bits (76), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 81 LREAFGLYDFDNRGFISPNDLKRMLAKLGESKSI---DECRMMIDRFDLNGDGVLSFEEF 137
L+E F + D D GFI ++LK L + + E + + D +GDG + EEF
Sbjct: 43 LKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIGAEEF 102
Query: 138 RIMMQ 142
+ M+Q
Sbjct: 103 QEMVQ 107
>pdb|1WDC|B Chain B, Scallop Myosin Regulatory Domain
pdb|1B7T|Y Chain Y, Myosin Digested By Papain
pdb|1KK7|Y Chain Y, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|B Chain B, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|B Chain B, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|B Chain B, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Y Chain Y, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Y Chain Y, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|B Chain B, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JTD|B Chain B, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
pdb|3JVT|B Chain B, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 33.9 bits (76), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
++++++++EAF + D D GF+S D+K + +LG + E M+ G L+
Sbjct: 13 PQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE----APGPLN 68
Query: 134 FEEF 137
F F
Sbjct: 69 FTMF 72
>pdb|1SCM|B Chain B, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 145
Score = 33.9 bits (76), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
++++++++EAF + D D GF+S D+K + +LG + E M+ G L+
Sbjct: 2 PQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE----APGPLN 57
Query: 134 FEEF 137
F F
Sbjct: 58 FTMF 61
>pdb|1KK8|B Chain B, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 139
Score = 33.9 bits (76), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLS 133
++++++++EAF + D D GF+S D+K + +LG + E M+ G L+
Sbjct: 1 PQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE----APGPLN 56
Query: 134 FEEF 137
F F
Sbjct: 57 FTMF 60
>pdb|3RV5|A Chain A, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|B Chain B, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|C Chain C, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|D Chain D, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
Length = 89
Score = 33.5 bits (75), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 74 AEEKLKDLREAFGLYDFDNR-GFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVL 132
EE+ + + AF ++ G IS +L ++ LG++ + +E + ID D +G G +
Sbjct: 13 TEEQKNEFKAAFDIFVLGAEDGCISTKELGKVXRXLGQNPTPEELQEXIDEVDEDGSGTV 72
Query: 133 SFEEFRI 139
F+EF +
Sbjct: 73 DFDEFLV 79
>pdb|1GGW|A Chain A, Cdc4p From Schizosaccharomyces Pombe
Length = 140
Score = 33.1 bits (74), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 65/138 (47%), Gaps = 10/138 (7%)
Query: 7 YERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDLV 66
Y++ F FD +G G++ + I + + G + L E+ +L + +D+E +
Sbjct: 7 YKQAFSLFDRHGTGRIPKTSIGDLLRAC--GQNPTLAEITEIESTLPAE----VDMEQFL 60
Query: 67 GLIEGASAEEKLKDLRE---AFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDR 123
++ + + D E F ++D D G I +L+ +L LGE S +E ++
Sbjct: 61 QVLNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKG 120
Query: 124 FDLNGDGVLSFEEFRIMM 141
+ DG++++ +F M+
Sbjct: 121 VPVK-DGMVNYHDFVQMI 137
>pdb|2W4T|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 136
Score = 33.1 bits (74), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 76 EKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLSFE 135
+++++++EAF + D D GF+S D+K + +LG + E M+ G L+F
Sbjct: 1 KQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE----APGPLNFT 56
Query: 136 EF 137
F
Sbjct: 57 MF 58
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 33.1 bits (74), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 64/132 (48%), Gaps = 25/132 (18%)
Query: 8 ERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDLVG 67
E +F FD NGD + E + +++ G L ++++ + DKD +G +D ++L+
Sbjct: 62 EAMFRAFDTNGDNTIDFLEYVAALNLVLRG--TLEHKLKWTFKIYDKDRNGCIDRQELLD 119
Query: 68 LIEGASAEEKLKDLREAFGL-YDFDNRG-FISPNDLKRMLAKLGESKSIDECRMMIDRFD 125
++E + L++A + + + +G ++P ++ +D +++D
Sbjct: 120 IVES------IYKLKKACSVEVEAEQQGKLLTPEEV------------VDRIFLLVDE-- 159
Query: 126 LNGDGVLSFEEF 137
NGDG LS EF
Sbjct: 160 -NGDGQLSLNEF 170
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 33.1 bits (74), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 41/103 (39%), Gaps = 20/103 (19%)
Query: 51 SLDKDGDGFLDLEDLVG----LIEGASAEEKLKDLREAFGLYDFDNRGFISPNDL----- 101
+ D D +G + ED + L+ G E+ L AF LYD + G+I+ ++
Sbjct: 110 AFDTDHNGAVSFEDFIKGLSILLRGTVQEK----LNWAFNLYDINKDGYITKEEMLDIMK 165
Query: 102 -------KRMLAKLGESKSIDECRMMIDRFDLNGDGVLSFEEF 137
K L E + D N DGV++ +EF
Sbjct: 166 AIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEF 208
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 33.1 bits (74), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLG 109
+ ++++ +EAF L D D GFIS ND++ LG
Sbjct: 52 TQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLG 87
Score = 29.6 bits (65), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 66/144 (45%), Gaps = 20/144 (13%)
Query: 5 REYERVFVYFDENGDGKVSPSEIK---NRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLD 61
+E++ F D++ DG +S ++I+ + +G + E ++S+ + G ++
Sbjct: 57 QEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLC---------TEQELDSMVAEAPGPIN 107
Query: 62 LEDLVGL----IEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDEC 117
+ + I G E+ + + AF L+D + G LKR L GE S DE
Sbjct: 108 FTMFLTIFGDRIAGTDEEDVIVN---AFNLFD-EGDGKCKEETLKRSLTTWGEKFSQDEV 163
Query: 118 RMMIDRFDLNGDGVLSFEEFRIMM 141
+ ++G+G++ ++F ++
Sbjct: 164 DQALSEAPIDGNGLIDIKKFAQIL 187
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 10 VFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDLVGLI 69
F FDE GDGK +K + G +EV+ A+ DG+G +D++ ++
Sbjct: 131 AFNLFDE-GDGKCKEETLKR--SLTTWGEKFSQDEVDQALSEAPIDGNGLIDIKKFAQIL 187
Query: 70 EGASAEE 76
+ EE
Sbjct: 188 TKGAKEE 194
>pdb|2KQY|A Chain A, Solution Structure Of Avian Thymic Hormone
Length = 108
Score = 32.7 bits (73), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 81 LREAFGLYDFDNRGFISPNDLKRMLAKLGESKSI---DECRMMIDRFDLNGDGVLSFEEF 137
+++ FG+ D D GFI +L+ L S + E + + D +GDG + EEF
Sbjct: 43 IKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEF 102
Query: 138 RIMMQ 142
+ +++
Sbjct: 103 QSLVK 107
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 32.7 bits (73), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 16/141 (11%)
Query: 9 RVFVYFDENGDGKVSPSEIKN---RMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDL 65
R F D +G + E + ++G+++ E E D++G G LDLE+
Sbjct: 41 RFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQA-----EAEGVCRKWDRNGSGTLDLEEF 95
Query: 66 VGLIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLK-----RMLAKL--GESKSIDECR 118
+ + ++ + + AF D G ++ +DL+ R K+ GE + R
Sbjct: 96 LRALRPPMSQAREAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLR 155
Query: 119 MMIDRFDLN-GDGVLSFEEFR 138
+D FD + DG ++ EF+
Sbjct: 156 RFLDNFDSSEKDGQVTLAEFQ 176
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Query: 68 LIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLN 127
L GAS ++ L F D D + ++ ++ LAKLG E + ++D N
Sbjct: 29 LSRGASG---IQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRN 85
Query: 128 GDGVLSFEEF 137
G G L EEF
Sbjct: 86 GSGTLDLEEF 95
>pdb|3FS7|A Chain A, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|B Chain B, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|C Chain C, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|D Chain D, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|E Chain E, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|F Chain F, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|G Chain G, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|H Chain H, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
Length = 109
Score = 32.7 bits (73), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 81 LREAFGLYDFDNRGFISPNDLKRMLAKLGESKSI---DECRMMIDRFDLNGDGVLSFEEF 137
+++ FG+ D D GFI +L+ L S + E + + D +GDG + EEF
Sbjct: 44 IKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEF 103
Query: 138 RIMMQ 142
+ +++
Sbjct: 104 QSLVK 108
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 32.7 bits (73), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 48/139 (34%), Gaps = 21/139 (15%)
Query: 15 DENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDLVG----LIE 70
+E G V+ K GD + D G + ED V L+
Sbjct: 29 NEXPSGVVNEETFKQIYAQFFPHGDAS-TYAHYLFNAFDTTQTGSVKFEDFVTALSILLR 87
Query: 71 GASAEEKLKDLREAFGLYDFDNRGFISPNDL------------KRMLAKLGESKSIDECR 118
G E+ LR F LYD + G+I+ ++ K L E
Sbjct: 88 GTVHEK----LRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVD 143
Query: 119 MMIDRFDLNGDGVLSFEEF 137
+ + D N DG+++ +EF
Sbjct: 144 VFFQKMDKNKDGIVTLDEF 162
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 32.7 bits (73), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 10/138 (7%)
Query: 6 EYERVFVYFDENGDGKVSPSE---IKNRMGMIVGGGDVLL---NEVEVAIESLDKDGDGF 59
E++ F FD GDGK+ S+ + +G +VL N ++S D + F
Sbjct: 11 EFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETF 70
Query: 60 LDLEDLVGLIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRM 119
L + V G E D E F ++D + G + +L+ +L LGE + +E
Sbjct: 71 LPMLQAVAKNRGQGTYE---DYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVET 127
Query: 120 MIDRFDLNGDGVLSFEEF 137
++ + + +G +++E F
Sbjct: 128 VLAGHE-DSNGCINYEAF 144
>pdb|2FCE|A Chain A, Solution Structure Of C-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 70
Score = 32.7 bits (73), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 36/61 (59%)
Query: 77 KLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLSFEE 136
K +D +AF ++D ++ G +S DL+ ML LGE + E ++ +++ +G + +++
Sbjct: 3 KTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKK 62
Query: 137 F 137
F
Sbjct: 63 F 63
>pdb|3H4S|E Chain E, Structure Of The Complex Of A Mitotic Kinesin With Its
Calcium Binding Regulator
Length = 135
Score = 32.3 bits (72), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 63 EDLVGLI-EGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLG-ESKSIDECRMM 120
ED++ ++ E EE + +L + F L R I+ L+R LG E S ++ + M
Sbjct: 23 EDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGM 82
Query: 121 IDRFDLNGDGVLSFEEFRIMM 141
+ DL+GDG L+ EF ++M
Sbjct: 83 VREGDLDGDGALNQTEFCVLM 103
>pdb|2BE4|A Chain A, X-ray Structure An Ef-hand Protein From Danio Rerio
Dr.36843
pdb|2Q4U|A Chain A, Ensemble Refinement Of The Crystal Structure Of An Ef-Hand
Protein From Danio Rerio Dr.36843
Length = 272
Score = 32.3 bits (72), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 49/107 (45%), Gaps = 18/107 (16%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMG--MIVGGGDVLLNEVEVAIES----LDKDGDGF 59
E+ +++ +D + G +S +E+KN + + + N+++ ++ DK+ DG
Sbjct: 105 EFXKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAXXKIFDKNKDGR 164
Query: 60 LDLEDLVGLI------------EGASAEEKLKDLREAFGLYDFDNRG 94
LDL DL ++ + +S E+ +D + F YD G
Sbjct: 165 LDLNDLARILALQENFLLQFKXDASSQVERKRDFEKIFAHYDVSRTG 211
>pdb|1A75|B Chain B, Whiting Parvalbumin
Length = 109
Score = 32.3 bits (72), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 8 ERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLN-EVEVAIESLDKDGDGFLDLEDLV 66
++ FV+ D++ G + E+K + + G L + E + +++ D DGDG + +E+ V
Sbjct: 45 KKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDGAIGVEEWV 104
Query: 67 GLIEG 71
L++
Sbjct: 105 ALVKA 109
Score = 30.8 bits (68), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 80 DLREAFGLYDFDNRGFISPNDLKRMLA--KLGESKSID-ECRMMIDRFDLNGDGVLSFEE 136
D+++AF D D GFI ++LK L K G D E + + D +GDG + EE
Sbjct: 43 DIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDGAIGVEE 102
Query: 137 FRIMMQ 142
+ +++
Sbjct: 103 WVALVK 108
>pdb|1A75|A Chain A, Whiting Parvalbumin
Length = 108
Score = 32.3 bits (72), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 8 ERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLN-EVEVAIESLDKDGDGFLDLEDLV 66
++ FV+ D++ G + E+K + + G L + E + +++ D DGDG + +E+ V
Sbjct: 44 KKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDGAIGVEEWV 103
Query: 67 GLIEG 71
L++
Sbjct: 104 ALVKA 108
Score = 30.8 bits (68), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 80 DLREAFGLYDFDNRGFISPNDLKRMLA--KLGESKSID-ECRMMIDRFDLNGDGVLSFEE 136
D+++AF D D GFI ++LK L K G D E + + D +GDG + EE
Sbjct: 42 DIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDGAIGVEE 101
Query: 137 FRIMMQ 142
+ +++
Sbjct: 102 WVALVK 107
>pdb|2SAS|A Chain A, Structure Of A Sarcoplasmic Calcium-Binding Protein From
Amphioxus Refined At 2.4 Angstroms Resolution
Length = 185
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Query: 92 NRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLSFEEFRIMMQ 142
N+G +S D K M A L DE R + R D+N D V+S+EE+ M +
Sbjct: 42 NKGSLSDADYKSMQASLE-----DEWRDLKGRADINKDDVVSWEEYLAMWE 87
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 15/77 (19%)
Query: 73 SAEEKLKDLREAFGLYDFDNRGFISPNDL------------KRMLAKLGESKSIDECRMM 120
+ EKLK AF LYD + G+I+ ++ + L E +
Sbjct: 6 TVHEKLK---WAFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVERF 62
Query: 121 IDRFDLNGDGVLSFEEF 137
++ D N DGV++ EEF
Sbjct: 63 FEKMDRNQDGVVTIEEF 79
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 48/139 (34%), Gaps = 21/139 (15%)
Query: 15 DENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDLVG----LIE 70
+E G V+ K GD + D G + ED V L+
Sbjct: 26 NECPSGVVNEDTFKQIYAQFFPHGDAS-TYAHYLFNAFDTTQTGSVKFEDFVTALSILLR 84
Query: 71 GASAEEKLKDLREAFGLYDFDNRGFISPNDL------------KRMLAKLGESKSIDECR 118
G E+ LR F LYD + G+I+ ++ K L E
Sbjct: 85 GTVHEK----LRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVD 140
Query: 119 MMIDRFDLNGDGVLSFEEF 137
+ + D N DG+++ +EF
Sbjct: 141 VFFQKMDKNKDGIVTLDEF 159
>pdb|1CDP|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
pdb|4CPV|A Chain A, Refined Crystal Structure Of Calcium-Liganded Carp
Parvalbumin 4.25 At 1.5-Angstroms Resolution
pdb|5CPV|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
Length = 109
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 80 DLREAFGLYDFDNRGFISPNDLKRMLAKL-GESKSID--ECRMMIDRFDLNGDGVLSFEE 136
D+++AF + D D GFI ++LK L +++++ E + + D +GDG + +E
Sbjct: 43 DVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIGVDE 102
Query: 137 FRIMMQ 142
F +++
Sbjct: 103 FTALVK 108
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 48/139 (34%), Gaps = 21/139 (15%)
Query: 15 DENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDLVG----LIE 70
+E G V+ K GD + D G + ED V L+
Sbjct: 62 NECPSGVVNEETFKQIYAQFFPHGDAS-TYAHYLFNAFDTTQTGSVKFEDFVTALSILLR 120
Query: 71 GASAEEKLKDLREAFGLYDFDNRGFISPNDL------------KRMLAKLGESKSIDECR 118
G E+ LR F LYD + G+I+ ++ K L E
Sbjct: 121 GTVHEK----LRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVD 176
Query: 119 MMIDRFDLNGDGVLSFEEF 137
+ + D N DG+++ +EF
Sbjct: 177 VFFQKMDKNKDGIVTLDEF 195
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 31.6 bits (70), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 10 VFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDLVGLI 69
F YFD++G G ++P E++ G DV + E+ +D+D DG +D + V
Sbjct: 104 AFTYFDKDGSGYITPDELQQACEEF-GVEDVRIEEL---XRDVDQDNDGRIDYNEFVAXX 159
Query: 70 EGAS 73
+ S
Sbjct: 160 QKGS 163
Score = 30.0 bits (66), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 68 LIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLN 127
+I + +EE++ L+E F D D G I+ +LK L ++G + E + D++
Sbjct: 16 VIAESLSEEEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILDLXQAADVD 75
Query: 128 GDGVLSFEEF 137
G + ++EF
Sbjct: 76 NSGTIDYKEF 85
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 31.6 bits (70), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 25/39 (64%)
Query: 75 EEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKS 113
+ ++++ +EAF + D + GFI DL MLA +G++ +
Sbjct: 3 QSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPT 41
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 57/134 (42%), Gaps = 33/134 (24%)
Query: 42 LNEVEVAIESLDKDGDGFLDLEDLVGL------------IEGASAE-------------- 75
+ E + A +D++ DGF+D EDL + +EG +E
Sbjct: 6 IQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSEAPGPINFTMFLTMF 65
Query: 76 -EKLKD------LREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNG 128
EKL +R AF +D + GFI + L+ +L +G+ + +E M ++
Sbjct: 66 GEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDK 125
Query: 129 DGVLSFEEFRIMMQ 142
G ++ EF +++
Sbjct: 126 KGNFNYVEFTRILK 139
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 31.6 bits (70), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 54 KDGDGFLDLEDLVGLIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKL---GE 110
KD F D DL+ + +A +K AF ++DFD+ G ++ DL R++ L GE
Sbjct: 106 KDSLSFEDFLDLLSVFSD-TATPDIKS-HYAFRIFDFDDDGTLNREDLSRLVNCLTGEGE 163
Query: 111 SK--SIDECRMMIDRF----DLNGDGVLSFEEFRIMM 141
S E + +ID D++ DG ++ EF+ ++
Sbjct: 164 DTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVI 200
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 31.6 bits (70), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 54 KDGDGFLDLEDLVGLIEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKL---GE 110
KD F D DL+ + +A +K AF ++DFD+ G ++ DL R++ L GE
Sbjct: 75 KDSLSFEDFLDLLSVFSD-TATPDIKS-HYAFRIFDFDDDGTLNREDLSRLVNCLTGEGE 132
Query: 111 SK--SIDECRMMIDRF----DLNGDGVLSFEEFRIMM 141
S E + +ID D++ DG ++ EF+ ++
Sbjct: 133 DTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVI 169
>pdb|2G2B|A Chain A, Nmr Structure Of The Human Allograft Inflammatory Factor 1
Length = 150
Score = 31.2 bits (69), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 31/65 (47%)
Query: 77 KLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLSFEE 136
KL+ +E + +D + G I LKRML KLG K+ E + +I S+ +
Sbjct: 49 KLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPD 108
Query: 137 FRIMM 141
F MM
Sbjct: 109 FLRMM 113
>pdb|3I5G|C Chain C, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|C Chain C, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|C Chain C, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|C Chain C, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 159
Score = 31.2 bits (69), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 54/112 (48%), Gaps = 12/112 (10%)
Query: 38 GDVL----LNEVEVAIES---LDKDGDGFLDLEDLVGLIEGASAEEK---LKDLREAFGL 87
GD+L +N E + K G+ LE+++ + E S+++ + EAF
Sbjct: 34 GDLLRCLGMNPTEAQVHQHGGTKKMGEKAYKLEEILPIYEEMSSKDTGTAADEFMEAFKT 93
Query: 88 YDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNG--DGVLSFEEF 137
+D + +G IS +++ +L LGE + D+C + D+ DG + +E+
Sbjct: 94 FDREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIREDIDGNIKYEDL 145
>pdb|2EC6|B Chain B, Placopecten Striated Muscle Myosin Ii
Length = 133
Score = 31.2 bits (69), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 78 LKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLSFEEF 137
+++++EAF + D + GFI NDLK + LG + E M+ G L+F F
Sbjct: 1 MQEMKEAFTMIDQNRDGFIDINDLKEEFSSLGRTPDDKELTAMLKE----APGPLNFTMF 56
Score = 30.4 bits (67), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 64/142 (45%), Gaps = 14/142 (9%)
Query: 5 REYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLED 64
+E + F D+N DG + +++K + D + + ++ K+ G L+
Sbjct: 2 QEMKEAFTMIDQNRDGFIDINDLKEEFSSLGRTPD------DKELTAMLKEAPGPLNFTM 55
Query: 65 LVGL----IEGASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMM 120
+ + + G +EE + R AFG++D D ++ +K +L +G++ + DE RM
Sbjct: 56 FLSIFSDKLSGTDSEETI---RNAFGMFDEDATKKLNIEYIKDLLENMGDNFNKDEMRMT 112
Query: 121 IDRFDLNGDGVLSFEEFRIMMQ 142
+ G G + F M++
Sbjct: 113 FKEAPVEG-GKFDYVRFVAMIK 133
>pdb|1G33|A Chain A, Crystal Structure Of Rat Parvalbumin Without The
N-Terminal Domain
Length = 73
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 80 DLREAFGLYDFDNRGFISPNDLKRMLAKLGESK---SIDECRMMIDRFDLNGDGVLSFEE 136
D+++ F + D D GFI ++L +L S E + ++ D +GDG + EE
Sbjct: 6 DVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEE 65
Query: 137 FRIMM 141
F ++
Sbjct: 66 FSTLV 70
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 73 SAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVL 132
+AEE+ ++ +EAF L+D DN ++ +L ++ LG + + + ++ +D + G
Sbjct: 9 TAEEQ-QEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKF 67
Query: 133 SFEEFRIMM 141
E F +M
Sbjct: 68 DQETFLTIM 76
Score = 30.0 bits (66), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 5 REYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLED 64
+EY+ F FD++ D K++ E+ M + G + ++ ++ DKD G D E
Sbjct: 14 QEYKEAFQLFDKDNDNKLTAEELGTVMRAL--GANPTKQKISEIVKDYDKDNSGKFDQET 71
Query: 65 LVGLI 69
+ ++
Sbjct: 72 FLTIM 76
>pdb|2D58|A Chain A, Human Microglia-Specific Protein Iba1
Length = 107
Score = 30.8 bits (68), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 31/65 (47%)
Query: 77 KLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLSFEE 136
KL+ +E + +D + G I LKRML KLG K+ E + +I S+ +
Sbjct: 30 KLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPD 89
Query: 137 FRIMM 141
F MM
Sbjct: 90 FLRMM 94
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 30.8 bits (68), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 49/139 (35%), Gaps = 21/139 (15%)
Query: 15 DENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDLVG----LIE 70
+E G V+ K GD + D G + ED V L+
Sbjct: 26 NECPSGVVNEDTFKQIYAQFFPHGDAS-TYAHYLFNAFDTTQTGSVKFEDFVTALSILLR 84
Query: 71 GASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAK------------LGESKSIDECR 118
G E+ LR F LYD + G+I+ ++ ++ L E
Sbjct: 85 GTVHEK----LRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGAYTYPVLAEDTPRQHVD 140
Query: 119 MMIDRFDLNGDGVLSFEEF 137
+ + D N DG+++ +EF
Sbjct: 141 VFFQKMDKNKDGIVTLDEF 159
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 30.8 bits (68), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 71 GASAEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDG 130
G S EE L F ++D + GFI +L +L GE ++ ++ D N DG
Sbjct: 6 GKSEEE----LANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDG 61
Query: 131 VLSFEEFRIMMQ 142
+ F+EF MM+
Sbjct: 62 RIDFDEFLKMME 73
Score = 27.7 bits (60), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIV--GGGDVLLNEVEVAIESLDKDGDGFLDLE 63
E F FD+N DG + E +G I+ G V+ ++E ++ DK+ DG +D +
Sbjct: 11 ELANCFRIFDKNADGFIDIEE----LGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFD 66
Query: 64 DLVGLIEGAS 73
+ + ++EG
Sbjct: 67 EFLKMMEGVQ 76
>pdb|1B8R|A Chain A, Parvalbumin
Length = 108
Score = 30.8 bits (68), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 80 DLREAFGLYDFDNRGFISPNDLKRMLAKL-GESKSID--ECRMMIDRFDLNGDGVLSFEE 136
D+++AF + D D GFI ++LK L +++++ E + + D +GDG + +E
Sbjct: 42 DVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIGVDE 101
Query: 137 FRIMMQ 142
+ +++
Sbjct: 102 WTALVK 107
>pdb|3F45|A Chain A, Structure Of The R75a Mutant Of Rat Alpha-Parvalbumin
Length = 109
Score = 30.4 bits (67), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 80 DLREAFGLYDFDNRGFISPNDLKRMLAKLGESK---SIDECRMMIDRFDLNGDGVLSFEE 136
D+++ F + D D GFI ++L +L S E + ++ D +GDG + EE
Sbjct: 42 DVKKVFHILDKDKSGFIEEDELGSILKGFSSDAADLSAKETKTLMAAGDKDGDGKIGVEE 101
Query: 137 FRIMM 141
F ++
Sbjct: 102 FSTLV 106
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 30.4 bits (67), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 37/66 (56%)
Query: 76 EKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLSFE 135
E++++LREAF +D D G+I+ DL + +G + E + + ++N G + F+
Sbjct: 7 EEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFD 66
Query: 136 EFRIMM 141
+F +M
Sbjct: 67 DFVELM 72
>pdb|1M8Q|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|U Chain U, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 147
Score = 30.4 bits (67), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/137 (18%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKD--GDGFLDLE 63
+++ F+ FD GD K++ S++ + + G + E+ + + K+ + E
Sbjct: 7 DFKEAFLLFDRTGDAKITASQVGDIARAL--GQNPTNAEINKILGNPSKEEMNAAAITFE 64
Query: 64 DLVGLIEGASAEE---KLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMM 120
+ + +++ A+ + +D E ++D + G + +L+ +LA LGE + +E +
Sbjct: 65 EFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEEL 124
Query: 121 IDRFDLNGDGVLSFEEF 137
+ + + +G +++E F
Sbjct: 125 M-KGQEDSNGCINYEAF 140
>pdb|2MYS|C Chain C, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 149
Score = 30.4 bits (67), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/138 (19%), Positives = 68/138 (49%), Gaps = 10/138 (7%)
Query: 6 EYERVFVYFDENGDGKVSPSE---IKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDL 62
+++ F+ FD GD K++ S+ I +G ++ N++ + S ++ +
Sbjct: 9 DFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEI--NKI-LGNPSKEEMNAAAITF 65
Query: 63 EDLVGLIEGASAEE---KLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRM 119
E+ + +++ A+ + +D E ++D + G + +L+ +LA LGE + +E
Sbjct: 66 EEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEE 125
Query: 120 MIDRFDLNGDGVLSFEEF 137
++ + + +G +++E F
Sbjct: 126 LM-KGQEDSNGCINYEAF 142
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 30.4 bits (67), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 44 EVEVAIESLDKDGDGFLDLEDLVGLIEGASAEEKLKDLREAFGLY---DFDNRGFISPND 100
+V+ E LDKD GF++ E+L G+++G SA + + E L D D+ G I ++
Sbjct: 42 QVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADE 101
Query: 101 LKRMLAK 107
+M+A+
Sbjct: 102 FAKMVAQ 108
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 30.4 bits (67), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 80 DLREAFGLYDFDNRGFISPNDLKRMLAKLGESK---SIDECRMMIDRFDLNGDGVLSFEE 136
D+++ F + D D GFI ++L +L S E + ++ D +GDG + EE
Sbjct: 42 DVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEE 101
Query: 137 FRIMM 141
F ++
Sbjct: 102 FSTLV 106
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 30.0 bits (66), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 10 VFVYFDENGDGKVSPSEIKNRMGMIVG---GGDVLLNEVEVAIESLDKDGDGFLDLEDLV 66
F +D + DGK+S E+ + ++VG + L N + ++ D+DGDG + +
Sbjct: 119 AFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFT 178
Query: 67 GLIEGASAEEKL 78
+E E+K+
Sbjct: 179 KSLEKMDVEQKM 190
Score = 29.3 bits (64), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 81 LREAFGLYDFDNRGFISPNDLKRML-----AKLGESKSIDECRMMIDRFDLNGDGVLSFE 135
L AF LYD D G IS +++ ++L ++ E + + + D +GDG +SF
Sbjct: 116 LHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFV 175
Query: 136 EF 137
EF
Sbjct: 176 EF 177
>pdb|3TW7|A Chain A, Structure Of Rhizobium Etli Pyruvate Carboxylase T882a
Crystallized Without Acetyl Coenzyme-A
pdb|3TW7|B Chain B, Structure Of Rhizobium Etli Pyruvate Carboxylase T882a
Crystallized Without Acetyl Coenzyme-A
pdb|3TW6|A Chain A, Structure Of Rhizobium Etli Pyruvate Carboxylase T882a
With The Allosteric Activator, Acetyl Coenzyme-A
pdb|3TW6|B Chain B, Structure Of Rhizobium Etli Pyruvate Carboxylase T882a
With The Allosteric Activator, Acetyl Coenzyme-A
pdb|3TW6|C Chain C, Structure Of Rhizobium Etli Pyruvate Carboxylase T882a
With The Allosteric Activator, Acetyl Coenzyme-A
pdb|3TW6|D Chain D, Structure Of Rhizobium Etli Pyruvate Carboxylase T882a
With The Allosteric Activator, Acetyl Coenzyme-A
Length = 1165
Score = 30.0 bits (66), Expect = 0.52, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 47 VAIESLDKDGDGFLDLEDLVGLIEGASAEEKLKDLREAFGL 87
+A+E L+K G + + D+ GL++ A+A+ K LREA GL
Sbjct: 714 LAVE-LEKAGAHIIAVXDMAGLLKPAAAKVLFKALREATGL 753
>pdb|2QF7|A Chain A, Crystal Structure Of A Complete Multifunctional Pyruvate
Carboxylase From Rhizobium Etli
pdb|2QF7|B Chain B, Crystal Structure Of A Complete Multifunctional Pyruvate
Carboxylase From Rhizobium Etli
Length = 1165
Score = 30.0 bits (66), Expect = 0.52, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 47 VAIESLDKDGDGFLDLEDLVGLIEGASAEEKLKDLREAFGL 87
+A+E L+K G + + D+ GL++ A+A+ K LREA GL
Sbjct: 714 LAVE-LEKAGAHIIAVXDMAGLLKPAAAKVLFKALREATGL 753
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 29.6 bits (65), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 11/76 (14%)
Query: 71 GASAEEKLKDLREAFGLYDFDNRGFISPNDLKRM-LAKLGESK---SIDECRMMIDR--- 123
A EK+K AF LYD GFI +LK M +A L ES+ S D +M+D+
Sbjct: 106 SAPVHEKVKF---AFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFV 162
Query: 124 -FDLNGDGVLSFEEFR 138
D DG + +E++
Sbjct: 163 QADRKNDGKIDIDEWK 178
>pdb|1WY9|A Chain A, Crystal Structure Of Microglia-Specific Protein, Iba1
Length = 147
Score = 29.6 bits (65), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Query: 73 SAEEKLKDLREAFGL----YDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNG 128
S +E L EAF + +D + G I LKRML KLG K+ E + +I
Sbjct: 38 SNDEDLPSKLEAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGS 97
Query: 129 DGVLSFEEFRIMM 141
+ S+ +F MM
Sbjct: 98 EETFSYSDFLRMM 110
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 29.6 bits (65), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 80 DLREAFGLYDFDNRGFISPNDLKRML---AKLGESKSIDECRMMIDRFDLNGDGVLSFEE 136
D+++ F D D GFI +LK +L A G + E + + D +GDG + +E
Sbjct: 43 DVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDE 102
Query: 137 FRIMMQ 142
F ++
Sbjct: 103 FETLVH 108
Score = 26.6 bits (57), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 4 GREYERVFVYFDENGDGKVSPSEIKNRMGMIVGGG-DVLLNEVEVAIESLDKDGDGFLDL 62
+ ++VF D + G + E+K + G D+ E + +++ DKDGDG + +
Sbjct: 41 ANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGI 100
Query: 63 EDLVGLIEGA 72
++ L+ A
Sbjct: 101 DEFETLVHEA 110
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d
Mutant
Length = 109
Score = 29.6 bits (65), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 80 DLREAFGLYDFDNRGFISPNDLKRMLAKLGESK---SIDECRMMIDRFDLNGDGVLSFEE 136
D+++ F + D D GFI ++L +L S E + ++ D +GDG + EE
Sbjct: 42 DVKKVFHILDKDKDGFIDEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEE 101
Query: 137 FRIMM 141
F ++
Sbjct: 102 FSTLV 106
Score = 25.8 bits (55), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRM-GMIVGGGDVLLNEVEVAIESLDKDGDGFLDLED 64
+ ++VF D++ DG + E+ + + G D+ E + + + DKDGDG + +E+
Sbjct: 42 DVKKVFHILDKDKDGFIDEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEE 101
Query: 65 LVGLI 69
L+
Sbjct: 102 FSTLV 106
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 29.6 bits (65), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 11/76 (14%)
Query: 71 GASAEEKLKDLREAFGLYDFDNRGFISPNDLKRM-LAKLGESKSI---DECRMMIDR--- 123
A EK+K AF LYD GFI +LK M +A L ES+ + D +M+D+
Sbjct: 106 SAPVHEKVKF---AFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFV 162
Query: 124 -FDLNGDGVLSFEEFR 138
D DG + +E++
Sbjct: 163 QADRKNDGKIDIDEWK 178
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 29.6 bits (65), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 10 VFVYFDENGDGKVSPSEIKNRMGMIVG---GGDVLLNEVEVAIESLDKDGDGFLDLEDLV 66
F +D + D K+S E+ + M+VG + L + + I+ D+DGD + + V
Sbjct: 118 AFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFV 177
Query: 67 GLIEGASAEEKL 78
++E E+K+
Sbjct: 178 KVLEKVDVEQKM 189
Score = 25.8 bits (55), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 81 LREAFGLYDFDNRGFISPNDLKRMLAKL-GESKSIDECRMMIDRF----DLNGDGVLSFE 135
L AF LYD D IS ++L ++L + G + S ++ + DR D +GD +SF
Sbjct: 115 LHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFT 174
Query: 136 EF 137
EF
Sbjct: 175 EF 176
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 29.3 bits (64), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 10 VFVYFDENGDGKVSPSEIKNRMGMIVG---GGDVLLNEVEVAIESLDKDGDGFLDLEDLV 66
F +D + D K+S E+ + M+VG + L + + I+ D+DGD + + V
Sbjct: 118 AFRLYDLDKDEKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFV 177
Query: 67 GLIEGASAEEKL 78
++E E+K+
Sbjct: 178 KVLEKVDVEQKM 189
>pdb|1RJV|A Chain A, Solution Structure Of Human Alpha-Parvalbumin Refined With
A Paramagnetism-Based Strategy
pdb|1RK9|A Chain A, Solution Structure Of Human Alpha-Parvalbumin (Minimized
Average Structure)
Length = 110
Score = 29.3 bits (64), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 80 DLREAFGLYDFDNRGFISPNDLKRMLAKLGESK---SIDECRMMIDRFDLNGDGVLSFEE 136
D+++ F + D D GFI ++L +L S E +M++ D +GDG + +E
Sbjct: 43 DVKKVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKETKMLMAAGDKDGDGKIGVDE 102
Query: 137 FRIMM 141
F ++
Sbjct: 103 FSTLV 107
>pdb|2HQ8|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
pdb|2HQ8|B Chain B, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
Length = 186
Score = 29.3 bits (64), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 22/120 (18%)
Query: 42 LNEVEVAIESLDKDGDGFLDLEDL------VGLIEGASAEEKLKDLREAFGLYDFDNRGF 95
L +++ ++ +D GDGF+ ED + I SA EK ++ R+ F L D G
Sbjct: 13 LRKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSA-EKAEETRQEF-LRVADQLG- 69
Query: 96 ISP-----------NDLKRMLAKLGESK--SIDECRMMIDRFDLNGDGVLSFEEFRIMMQ 142
++P N +L GE K ++ + +M D D + DG +S EF+ +Q
Sbjct: 70 LAPGVRISVEEAAVNATDSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQ 129
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 75 EEKLKDLREAFGLYDF---DNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGV 131
EEK + ++ +YD D G++S + K L +G + D+ + D N +G
Sbjct: 95 EEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQ 154
Query: 132 LSFEEFRIMM 141
+S +EF + +
Sbjct: 155 ISRDEFLVTV 164
>pdb|1SL8|A Chain A, Calcium-Loaded Apo-Aequorin From Aequorea Victoria
Length = 191
Score = 28.9 bits (63), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 28 KNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDLVGLIEGASAEEKLKDLREAFGL 87
KN++ +I GD L + +DKD +G + L++ + A + +D E F +
Sbjct: 101 KNQITLIRLWGDALFD-------IIDKDQNGAISLDEWKAYTKSAGIIQSSEDCEETFRV 153
Query: 88 YDFDNRGFISPNDLKR 103
D D G + +++ R
Sbjct: 154 CDIDESGQLDVDEMTR 169
>pdb|2L50|A Chain A, Solution Structure Of Apo S100a16
pdb|2L50|B Chain B, Solution Structure Of Apo S100a16
pdb|2L51|A Chain A, Solution Structure Of Calcium Bound S100a16
pdb|2L51|B Chain B, Solution Structure Of Calcium Bound S100a16
Length = 102
Score = 28.9 bits (63), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 100 DLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLSFEEFRIMM 141
+L ML+ G K+ D+ +I D N DG +SF+E+ ++
Sbjct: 44 ELNHMLSDTGNRKAADK---LIQNLDANHDGRISFDEYWTLI 82
>pdb|3NXA|A Chain A, X-Ray Structure Of The Apo Form Of Human S100a16
pdb|3NXA|B Chain B, X-Ray Structure Of The Apo Form Of Human S100a16
pdb|3NXA|C Chain C, X-Ray Structure Of The Apo Form Of Human S100a16
pdb|3NXA|D Chain D, X-Ray Structure Of The Apo Form Of Human S100a16
Length = 100
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 100 DLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLSFEEFRIMM 141
+L ML+ G K+ D+ +I D N DG +SF+E+ ++
Sbjct: 43 ELNHMLSDTGNRKAADK---LIQNLDANHDGRISFDEYWTLI 81
>pdb|1IG5|A Chain A, Bovine Calbindin D9k Binding Mg2+
pdb|1IGV|A Chain A, Bovine Calbindin D9k Binding Mn2+
pdb|3ICB|A Chain A, The Refined Structure Of Vitamin D-Dependent Calcium-
Binding Protein From Bovine Intestine. Molecular
Details, Ion Binding, And Implications For The Structure
Of Other Calcium-Binding Proteins
Length = 75
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 18/23 (78%)
Query: 120 MIDRFDLNGDGVLSFEEFRIMMQ 142
+ + D NGDG +SFEEF+++++
Sbjct: 49 LFEELDKNGDGEVSFEEFQVLVK 71
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 8 ERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDLVG 67
+RVF FD+N DGK+S E R + ++ E +D DG+G L+ ++
Sbjct: 4 KRVFEKFDKNKDGKLSLDEF--REVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTS 61
Query: 68 LIE 70
IE
Sbjct: 62 CIE 64
>pdb|2BCB|A Chain A, High-Resolution Solution Structure Of Calcium-Loaded
Calbindin D9k
pdb|1B1G|A Chain A, Solvated Refinement Of Ca-Loaded Calbindin D9k
Length = 75
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 18/23 (78%)
Query: 120 MIDRFDLNGDGVLSFEEFRIMMQ 142
+ + D NGDG +SFEEF+++++
Sbjct: 49 LFEELDKNGDGEVSFEEFQVLVK 71
>pdb|1KCY|A Chain A, Nmr Solution Structure Of Apo Calbindin D9k (F36g + P43m
Mutant)
Length = 75
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 18/23 (78%)
Query: 120 MIDRFDLNGDGVLSFEEFRIMMQ 142
+ + D NGDG +SFEEF+++++
Sbjct: 49 LFEELDKNGDGEVSFEEFQVLVK 71
>pdb|2W4A|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 145
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/137 (18%), Positives = 68/137 (49%), Gaps = 8/137 (5%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKD--GDGFLDLE 63
+++ F+ FD GD K++ S++ + + + G + E+ + + K+ + E
Sbjct: 5 DFKEAFLLFDRTGDAKITLSQVGDIVRAL--GQNPTNAEINKILGNPSKEEMNAKKITFE 62
Query: 64 DLVGLIEGASAEE---KLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMM 120
+ + +++ A+ + +D E ++D + G + +L+ +LA LGE + +E +
Sbjct: 63 EFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEEL 122
Query: 121 IDRFDLNGDGVLSFEEF 137
+ + + +G +++E F
Sbjct: 123 M-KGQEDSNGCINYEAF 138
>pdb|4ICB|A Chain A, Proline Cis-Trans Isomers In Calbindin D9k Observed By X-
Ray Crystallography
Length = 76
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 18/23 (78%)
Query: 120 MIDRFDLNGDGVLSFEEFRIMMQ 142
+ + D NGDG +SFEEF+++++
Sbjct: 50 LFEELDKNGDGEVSFEEFQVLVK 72
>pdb|1N65|A Chain A, Family Of Nmr Solution Structures Of Ca Ce Calbindin D9k
In Denaturating Conditions
Length = 75
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 18/23 (78%)
Query: 120 MIDRFDLNGDGVLSFEEFRIMMQ 142
+ + D NGDG +SFEEF+++++
Sbjct: 49 LFEELDKNGDGEVSFEEFQVLVK 71
>pdb|1CDN|A Chain A, Solution Structure Of (Cd2+)1-Calbindin D9k Reveals
Details Of The Stepwise Structural Changes Along The
Apo--> (Ca2+) Ii1--> (Ca2+)i,Ii2 Binding Pathway
pdb|1CLB|A Chain A, Determination Of The Solution Structure Of Apo Calbindin
D9k By Nmr Spectroscopy
pdb|2BCA|A Chain A, High-Resolution Solution Structure Of Calcium-Loaded
Calbindin D9k
Length = 76
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 18/23 (78%)
Query: 120 MIDRFDLNGDGVLSFEEFRIMMQ 142
+ + D NGDG +SFEEF+++++
Sbjct: 50 LFEELDKNGDGEVSFEEFQVLVK 72
>pdb|1KSM|A Chain A, Average Nmr Solution Structure Of Ca Ln Calbindin D9k
pdb|1KQV|A Chain A, Family Of Nmr Solution Structures Of Ca Ln Calbindin D9k
Length = 79
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 18/23 (78%)
Query: 120 MIDRFDLNGDGVLSFEEFRIMMQ 142
+ + D NGDG +SFEEF+++++
Sbjct: 53 LFEELDKNGDGEVSFEEFQVLVK 75
>pdb|1BU3|A Chain A, Refined Crystal Structure Of Calcium-Bound Silver Hake (Pi
4.2) Parvalbumin At 1.65 A
Length = 109
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 80 DLREAFGLYDFDNRGFISPNDLKRMLA--KLGESKSID-ECRMMIDRFDLNGDGVLSFEE 136
D+++AF + D D GFI ++LK L G D E + + D +GDG + +E
Sbjct: 43 DIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAIGVDE 102
Query: 137 FRIMMQ 142
+ +++
Sbjct: 103 WAALVK 108
Score = 25.8 bits (55), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 14/65 (21%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 8 ERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLN-EVEVAIESLDKDGDGFLDLEDLV 66
++ F D++ G + E+K + + G L + E + +++ D DGDG + +++
Sbjct: 45 KKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAIGVDEWA 104
Query: 67 GLIEG 71
L++
Sbjct: 105 ALVKA 109
>pdb|1QXP|A Chain A, Crystal Structure Of A Mu-Like Calpain
pdb|1QXP|B Chain B, Crystal Structure Of A Mu-Like Calpain
Length = 900
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 114 IDECRMMIDRFDLNGDGVLSFEEFRIMM 141
ID CR M+ D + G L FEEF+ +
Sbjct: 773 IDTCRSMVAVMDSDTTGKLGFEEFKYLW 800
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 101 LKRMLAKLGESK----SIDECRMMIDRFDLNGDGVLSFEEFRIMM 141
L R+++K + + S++ CR M++ D +G+G L EF I+
Sbjct: 559 LNRIISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNILW 603
>pdb|2LVV|A Chain A, Nmr Structure Of Tb24
Length = 226
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 61/147 (41%), Gaps = 10/147 (6%)
Query: 3 KGREYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGD----- 57
K R E +F FD NG GK+ E+ + I+ + + ++ + DK D
Sbjct: 50 KSRRIE-LFKQFDTNGTGKLGFREVLDGCYGILKLDEFTTHLPDIVQRAFDKAKDLGNKV 108
Query: 58 GFLDLEDLVGLIEGASAEEKLKDLRE---AFGLYDFDNRGFISPNDLKRMLAKLGE-SKS 113
+ EDLV +E + D+ E F D D + + K L KL E
Sbjct: 109 KGVGEEDLVEFLEFRLMLCYIYDIFELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVD 168
Query: 114 IDECRMMIDRFDLNGDGVLSFEEFRIM 140
I + + + D NG GV++F+EF
Sbjct: 169 ITDATTVFNEIDTNGSGVVTFDEFSCW 195
>pdb|1BOC|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 76
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 18/23 (78%)
Query: 120 MIDRFDLNGDGVLSFEEFRIMMQ 142
+ + D NGDG +SFEEF+++++
Sbjct: 50 LFEELDKNGDGEVSFEEFQVLVK 72
>pdb|1HT9|A Chain A, Domain Swapping Ef-Hands
pdb|1HT9|B Chain B, Domain Swapping Ef-Hands
Length = 76
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 18/23 (78%)
Query: 120 MIDRFDLNGDGVLSFEEFRIMMQ 142
+ + D NGDG +SFEEF+++++
Sbjct: 50 LFEELDKNGDGEVSFEEFQVLVK 72
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 28.1 bits (61), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 64/141 (45%), Gaps = 8/141 (5%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGF--LDLE 63
E++ F FD GDGK+ S+ + M + G + EV + + D L E
Sbjct: 10 EFKEAFQLFDRTGDGKILYSQCGDVMRAL--GQNPTNAEVMKVLGNPKSDEMNLKTLKFE 67
Query: 64 DLVGLIEGASAEEK---LKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMM 120
+ +++ + + +D E ++D + G + +++ +L LGE + +E +
Sbjct: 68 QFLPMMQTIAKNKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEQL 127
Query: 121 IDRFDLNGDGVLSFEEFRIMM 141
+ + + +G +++EE M+
Sbjct: 128 VAGHE-DSNGCINYEELVRMV 147
Score = 27.3 bits (59), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 8/74 (10%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMI-----DRFDLNG 128
+EE+ + +EAF L+D G I + ++ LG++ + E ++ D +L
Sbjct: 4 SEEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLK- 62
Query: 129 DGVLSFEEFRIMMQ 142
L FE+F MMQ
Sbjct: 63 --TLKFEQFLPMMQ 74
>pdb|1CB1|A Chain A, Three-Dimensional Solution Structure Of Ca2+-Loaded
Porcine Calbindin D9k Determined By Nuclear Magnetic
Resonance Spectroscopy
Length = 78
Score = 28.1 bits (61), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 17/23 (73%)
Query: 120 MIDRFDLNGDGVLSFEEFRIMMQ 142
+ D NGDG +SFEEF+++++
Sbjct: 52 LFQELDKNGDGEVSFEEFQVLVK 74
>pdb|1BOD|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 74
Score = 28.1 bits (61), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 18/23 (78%)
Query: 120 MIDRFDLNGDGVLSFEEFRIMMQ 142
+ + D NGDG +SFEEF+++++
Sbjct: 48 LFEELDKNGDGEVSFEEFQVLVK 70
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 148
Score = 28.1 bits (61), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 64/141 (45%), Gaps = 8/141 (5%)
Query: 6 EYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGF--LDLE 63
E++ F FD GDGK+ S+ + M + G + EV + + D L E
Sbjct: 8 EFKEAFQLFDRTGDGKILYSQCGDVMRAL--GQNPTNAEVMKVLGNPKSDEMNLKTLKFE 65
Query: 64 DLVGLIEGASAEEK---LKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMM 120
+ +++ + + +D E ++D + G + +++ +L LGE + +E +
Sbjct: 66 QFLPMMQTIAKNKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEQL 125
Query: 121 IDRFDLNGDGVLSFEEFRIMM 141
+ + + +G +++EE M+
Sbjct: 126 VAGHE-DSNGCINYEELVRMV 145
Score = 27.3 bits (59), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 8/74 (10%)
Query: 74 AEEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMI-----DRFDLNG 128
+EE+ + +EAF L+D G I + ++ LG++ + E ++ D +L
Sbjct: 2 SEEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLK- 60
Query: 129 DGVLSFEEFRIMMQ 142
L FE+F MMQ
Sbjct: 61 --TLKFEQFLPMMQ 72
>pdb|2JC2|A Chain A, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|B Chain B, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|C Chain C, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|D Chain D, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
Length = 198
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 94 GFISPNDLKRMLAKLG-----ESKSIDECRMMIDRFDLNGDGVLSFEEFR 138
G I ++L+R L + G + +++ CR+M+ D + G + F EF+
Sbjct: 47 GQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFK 96
>pdb|2HPS|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri
Length = 186
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 27/57 (47%)
Query: 85 FGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLSFEEFRIMM 141
+ D D G++S + K L +G + D+ + D N +G +S +EF + +
Sbjct: 108 YDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLVTV 164
Score = 26.6 bits (57), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 22/120 (18%)
Query: 42 LNEVEVAIESLDKDGDGFLDLEDL------VGLIEGASAEEKLKDLREAFGLYDFDNRGF 95
L + + + +D GDGF+ ED + I SA EK ++ R+ F L D G
Sbjct: 13 LRKXKTRXQRVDVTGDGFISREDYELIAVRIAKIAKLSA-EKAEETRQEF-LRVADQLG- 69
Query: 96 ISP-----------NDLKRMLAKLGESKSIDECRMMI--DRFDLNGDGVLSFEEFRIMMQ 142
++P N +L GE K+ + +I D D + DG +S EF+ +Q
Sbjct: 70 LAPGVRISVEEAAVNATDSLLKXKGEEKAXAVIQSLIXYDCIDTDKDGYVSLPEFKAFLQ 129
>pdb|1JUO|A Chain A, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
pdb|1JUO|B Chain B, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
Length = 198
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 94 GFISPNDLKRMLAKLG-----ESKSIDECRMMIDRFDLNGDGVLSFEEFR 138
G I ++L+R L + G + +++ CR+M+ D + G + F EF+
Sbjct: 47 GQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFK 96
>pdb|3LI6|A Chain A, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|D Chain D, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|G Chain G, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|J Chain J, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
Length = 66
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 8 ERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNE--VEVAIESLDKDGDGFLD 61
E +F D NGDG VS E+K V + NE +++ +S+D DG+G +D
Sbjct: 3 EALFKEIDVNGDGAVSYEEVK----AFVSKKRAIKNEQLLQLIFKSIDADGNGEID 54
>pdb|1B9A|A Chain A, Parvalbumin (Mutation;d51a, F102w)
Length = 108
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 80 DLREAFGLYDFDNRGFISPNDLKRMLAKL-GESKSID--ECRMMIDRFDLNGDGVLSFEE 136
D+++AF + D GFI ++LK L +++++ E + + D +GDG + +E
Sbjct: 42 DVKKAFAIIAQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIGVDE 101
Query: 137 FRIMMQ 142
+ +++
Sbjct: 102 WTALVK 107
>pdb|1GJY|A Chain A, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|B Chain B, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|C Chain C, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|D Chain D, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
Length = 167
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 94 GFISPNDLKRMLAKLG-----ESKSIDECRMMIDRFDLNGDGVLSFEEFR 138
G I ++L+R L + G + +++ CR+M+ D + G + F EF+
Sbjct: 16 GQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFK 65
>pdb|1ALW|A Chain A, Inhibitor And Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALW|B Chain B, Inhibitor And Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALV|A Chain A, Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALV|B Chain B, Calcium Bound Domain Vi Of Porcine Calpain
pdb|1NX0|A Chain A, Structure Of Calpain Domain 6 In Complex With Calpastatin
Dic
pdb|1NX0|B Chain B, Structure Of Calpain Domain 6 In Complex With Calpastatin
Dic
pdb|1NX1|A Chain A, Calpain Domain Vi Complexed With Calpastatin Inhibitory
Domain C (Dic)
pdb|1NX1|B Chain B, Calpain Domain Vi Complexed With Calpastatin Inhibitory
Domain C (Dic)
pdb|1NX2|A Chain A, Calpain Domain Vi
pdb|1NX3|A Chain A, Calpain Domain Vi In Complex With The Inhibitor Pd150606
Length = 173
Score = 27.7 bits (60), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 114 IDECRMMIDRFDLNGDGVLSFEEFRIMM 141
ID CR M+ D + G L FEEF+ +
Sbjct: 46 IDTCRSMVAVMDSDTTGKLGFEEFKYLW 73
>pdb|1DF0|B Chain B, Crystal Structure Of M-Calpain
pdb|1U5I|B Chain B, Crystal Structure Analysis Of Rat M-Calpain Mutant Lys10
Thr
pdb|3DF0|B Chain B, Calcium-Dependent Complex Between M-Calpain And
Calpastatin
pdb|3BOW|B Chain B, Structure Of M-Calpain In Complex With Calpastatin
Length = 184
Score = 27.7 bits (60), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 114 IDECRMMIDRFDLNGDGVLSFEEFRIMM 141
ID CR M+ D + G L FEEF+ +
Sbjct: 57 IDTCRSMVAVMDSDTTGKLGFEEFKYLW 84
>pdb|1KFX|S Chain S, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|S Chain S, Crystal Structure Of Human M-Calpain Form Ii
Length = 184
Score = 27.7 bits (60), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 114 IDECRMMIDRFDLNGDGVLSFEEFRIMM 141
ID CR M+ D + G L FEEF+ +
Sbjct: 57 IDTCRSMVAVMDSDTTGKLGFEEFKYLW 84
>pdb|1AJ5|A Chain A, Calpain Domain Vi Apo
pdb|1AJ5|B Chain B, Calpain Domain Vi Apo
Length = 173
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 114 IDECRMMIDRFDLNGDGVLSFEEFRIMM 141
ID CR M+ D + G L FEEF+ +
Sbjct: 46 IDTCRSMVAVMDSDTTGKLGFEEFKYLW 73
>pdb|1NP8|A Chain A, 18-K C-Terminally Trunucated Small Subunit Of Calpain
pdb|1NP8|B Chain B, 18-K C-Terminally Trunucated Small Subunit Of Calpain
Length = 159
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 114 IDECRMMIDRFDLNGDGVLSFEEFRIMMQ 142
ID CR M+ D + G L FEEF+ +
Sbjct: 53 IDTCRSMVAVMDSDTTGKLGFEEFKYLWN 81
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 81 LREAFGLYDFDNRGFISPNDLKRMLAKLGESK---SIDECRMMIDRFDLNGDGVLSFEEF 137
+++ F D D G++ ++LK L K + E + ++D D +GDG + +EF
Sbjct: 43 VKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEF 102
Query: 138 RIMMQ 142
+ M+
Sbjct: 103 QEMVH 107
>pdb|2ZFD|A Chain A, The Crystal Structure Of Plant Specific Calcium Binding
Protein Atcbl2 In Complex With The Regulatory Domain Of
Atcipk14
Length = 226
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 52 LDKDGDGFLDLEDLVGLIEGASAEEKLKD-LREAFGLYDFDNRGFISPNDLKRM-LAKLG 109
D +G L E+ + + D + +F LYD +GFI ++K+M +A L
Sbjct: 94 FDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLA 153
Query: 110 ES 111
ES
Sbjct: 154 ES 155
>pdb|1EJ3|A Chain A, Crystal Structure Of Aequorin
pdb|1EJ3|B Chain B, Crystal Structure Of Aequorin
pdb|1UHI|A Chain A, Crystal Structure Of I-aequorin
pdb|1UHI|B Chain B, Crystal Structure Of I-aequorin
pdb|1UHK|A Chain A, Crystal Structure Of N-Aequorin
pdb|1UHK|B Chain B, Crystal Structure Of N-Aequorin
Length = 191
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 7/77 (9%)
Query: 28 KNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDLVGLIEGASAEEKLKDLREAFGL 87
KN +I GD L + V DKD +G + L++ + A + +D E F +
Sbjct: 101 KNEPTLIRIWGDALFDIV-------DKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRV 153
Query: 88 YDFDNRGFISPNDLKRM 104
D D G + +++ R
Sbjct: 154 CDIDESGQLDVDEMTRQ 170
>pdb|2I18|A Chain A, The Refined Structure Of C-Terminal Domain Of An Ef-Hand
Calcium Binding Protein From Entamoeba Histolytica
Length = 64
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 81 LREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLSFEEF 137
L+ + L D D G ++ ++ K G I++ + + D NGDG ++ EEF
Sbjct: 7 LKVLYKLMDVDGDGKLTKEEVTSFFKKHG----IEKVAEQVMKADANGDGYITLEEF 59
>pdb|3RWL|A Chain A, Structure Of P450pyr Hydroxylase
Length = 426
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 22 VSPSE-IKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDLVGLIEGASAE 75
++P E + N + +IVGG D N + + +L K+ D F L+ L+E E
Sbjct: 250 MTPEEYLGNVLLLIVGGNDTTRNSMTGGVLALHKNPDQFAKLKANPALVETMVPE 304
>pdb|1UHN|A Chain A, The Crystal Structure Of The Calcium Binding Protein
Atcbl2 From Arabidopsis Thaliana
Length = 189
Score = 27.3 bits (59), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 52 LDKDGDGFLDLEDLVGLIEGASAEEKLKD-LREAFGLYDFDNRGFISPNDLKRM-LAKLG 109
D +G L E+ + + D + +F LYD +GFI ++K+M +A L
Sbjct: 63 FDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLA 122
Query: 110 ES 111
ES
Sbjct: 123 ES 124
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 27.3 bits (59), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/69 (23%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Query: 2 VKGREYERVFVYFDENGDGKVSPSEIKNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLD 61
+K + R+ D N G ++ +E M ++ ++ A +DKD DG++
Sbjct: 70 IKKWDINRILQALDINDRGNITYTEF---MAGCYRWKNIESTFLKAAFNKIDKDEDGYIS 126
Query: 62 LEDLVGLIE 70
D+V L+
Sbjct: 127 KSDIVSLVH 135
>pdb|2W4A|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 150
Score = 27.3 bits (59), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 21/35 (60%)
Query: 75 EEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLG 109
+ +++D +EAF + D + G I +DL+ A +G
Sbjct: 8 QTQIQDFKEAFTVIDQNRDGIIDKDDLRETFAAMG 42
>pdb|1M8Q|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|T Chain T, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 145
Score = 27.3 bits (59), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 75 EEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLG 109
E +++D +EAF + D + G I +DL+ A +G
Sbjct: 3 ETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMG 37
>pdb|2MYS|B Chain B, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
pdb|1I84|U Chain U, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|Z Chain Z, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 166
Score = 26.9 bits (58), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 75 EEKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLG 109
E +++D +EAF + D + G I +DL+ A +G
Sbjct: 21 ETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMG 55
>pdb|1XK4|C Chain C, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|D Chain D, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|G Chain G, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|H Chain H, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|K Chain K, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|L Chain L, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
Length = 113
Score = 26.6 bits (57), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 100 DLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLSFEEFRIMM 141
DL+ L K E+K+ +++ D N D LSFEEF ++M
Sbjct: 43 DLQNFLKK--ENKNEKVIEHIMEDLDTNADKQLSFEEFIMLM 82
>pdb|4GGF|C Chain C, Crystal Structure Of Mn2+ Bound Calprotectin
pdb|4GGF|L Chain L, Crystal Structure Of Mn2+ Bound Calprotectin
pdb|4GGF|T Chain T, Crystal Structure Of Mn2+ Bound Calprotectin
pdb|4GGF|V Chain V, Crystal Structure Of Mn2+ Bound Calprotectin
Length = 114
Score = 26.6 bits (57), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 100 DLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLSFEEFRIMM 141
DL+ L K E+K+ +++ D N D LSFEEF ++M
Sbjct: 44 DLQNFLKK--ENKNEKVIEHIMEDLDTNADKQLSFEEFIMLM 83
>pdb|2PMY|A Chain A, Ef-Hand Domain Of Human Rasef
pdb|2PMY|B Chain B, Ef-Hand Domain Of Human Rasef
Length = 91
Score = 26.6 bits (57), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 76 EKLKDLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLSFE 135
E+L LR F D + G + + + + +L + E + R D + DG ++F+
Sbjct: 24 EELARLRSVFAACDANRSGRLEREEFRALCTELRVRPADAE--AVFQRLDADRDGAITFQ 81
Query: 136 EF 137
EF
Sbjct: 82 EF 83
>pdb|1IRJ|A Chain A, Crystal Structure Of The Mrp14 Complexed With Chaps
pdb|1IRJ|B Chain B, Crystal Structure Of The Mrp14 Complexed With Chaps
pdb|1IRJ|C Chain C, Crystal Structure Of The Mrp14 Complexed With Chaps
pdb|1IRJ|D Chain D, Crystal Structure Of The Mrp14 Complexed With Chaps
pdb|1IRJ|E Chain E, Crystal Structure Of The Mrp14 Complexed With Chaps
pdb|1IRJ|F Chain F, Crystal Structure Of The Mrp14 Complexed With Chaps
pdb|1IRJ|G Chain G, Crystal Structure Of The Mrp14 Complexed With Chaps
pdb|1IRJ|H Chain H, Crystal Structure Of The Mrp14 Complexed With Chaps
Length = 113
Score = 26.6 bits (57), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 100 DLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLSFEEFRIMM 141
DL+ L K +++ + E +++ D N D LSFEEF ++M
Sbjct: 43 DLQNFLKKENKNEKVIE--HIMEDLDTNADKQLSFEEFIMLM 82
>pdb|3A8R|A Chain A, The Structure Of The N-Terminal Regulatory Domain Of A
Plant Nadph Oxidase
pdb|3A8R|B Chain B, The Structure Of The N-Terminal Regulatory Domain Of A
Plant Nadph Oxidase
Length = 179
Score = 26.2 bits (56), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 12/74 (16%)
Query: 11 FVYFDENGDGKVSPSEIK---------NRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLD 61
F D+N DG+++ E+K N++ I D + +E LD G+++
Sbjct: 104 FDMVDKNADGRLTAEEVKEIIALSASANKLSKIKERAD---EYTALIMEELDPTNLGYIE 160
Query: 62 LEDLVGLIEGASAE 75
+EDL L+ + +E
Sbjct: 161 MEDLEALLLQSPSE 174
>pdb|3FAW|A Chain A, Crystal Structure Of The Group B Streptococcus Pullulanase
Sap
pdb|3FAX|A Chain A, The Crystal Structure Of Gbs Pullulanase Sap In Complex
With Maltotetraose
Length = 877
Score = 26.2 bits (56), Expect = 5.8, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 21 KVSPSEIKNRMGMI--VGGGDVLLNEVEVAIESLDKDGDGFLDLEDLVGLIEGASAEEKL 78
K+S +EI + +I VG GD+ ++ +A +++D GD + + EK
Sbjct: 709 KLSKAEIDREVSLITEVGQGDIKEKDLVIAYQTIDSKGDIYAVFVNADSKARNVLLGEKY 768
Query: 79 KDLREAFGLYDFDNRG 94
K L + + D D G
Sbjct: 769 KHLLKGQVIVDADQAG 784
>pdb|1B8C|A Chain A, Parvalbumin
pdb|1B8C|B Chain B, Parvalbumin
pdb|1B8L|A Chain A, Calcium-Bound D51aE101DF102W TRIPLE MUTANT OF BETA CARP
Parvalbumin
Length = 108
Score = 26.2 bits (56), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/66 (22%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 80 DLREAFGLYDFDNRGFISPNDLKRMLAKL-GESKSID--ECRMMIDRFDLNGDGVLSFEE 136
D+++AF + D GFI ++LK L +++++ E + + D +GDG + ++
Sbjct: 42 DVKKAFAIIAQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIGVDD 101
Query: 137 FRIMMQ 142
+ +++
Sbjct: 102 WTALVK 107
>pdb|2LLT|A Chain A, Post-Translational S-Nitrosylation Is An Endogenous Factor
Fine-Tuning Human S100a1 Protein Properties
pdb|2LLT|B Chain B, Post-Translational S-Nitrosylation Is An Endogenous Factor
Fine-Tuning Human S100a1 Protein Properties
Length = 93
Score = 26.2 bits (56), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 96 ISPNDLKRMLAK-----LGESKSIDECRMMIDRFDLNGDGVLSFEEFRIMM 141
+S +LK +L L K +D ++ D NGDG + F+E+ +++
Sbjct: 28 LSKKELKELLQTELSGFLDAQKDVDAVDKVMKELDENGDGEVDFQEYVVLV 78
>pdb|3RLZ|A Chain A, 2.0 Angstrom X-Ray Structure Of Bovine Ca(2+)-S100b D63n
pdb|3RLZ|B Chain B, 2.0 Angstrom X-Ray Structure Of Bovine Ca(2+)-S100b D63n
pdb|3RM1|A Chain A, 1.24 Angstrom X-Ray Structure Of Bovine
Trtk12-Ca(2+)-S100b D63n
Length = 92
Score = 26.2 bits (56), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Query: 99 NDLKRMLAKLGESKSIDECRMMIDRFDLNGDGVLSFEEF 137
N+L L ++ E + +D+ +++ D NGDG F+EF
Sbjct: 39 NELSHFLEEIKEQEVVDK---VMETLDSNGDGECDFQEF 74
>pdb|3AT7|A Chain A, Crystal Structure Of Bacterial Cell-Surface
Alginate-Binding Protein Algp7
pdb|3AT7|B Chain B, Crystal Structure Of Bacterial Cell-Surface
Alginate-Binding Protein Algp7
Length = 283
Score = 26.2 bits (56), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Query: 34 IVGGGDVLLNEVEVAIESLDKDGDGFLDLEDLVGLIEGASAEEKLKDLREAFGLYDFDNR 93
+VGG VL+ EV S ++D DL D EGA +K+ DL + DNR
Sbjct: 159 VVGGAAVLMEEVAATKISGEEDRYSHTDLWDFQANFEGA---KKIVDLFRPLVVK--DNR 213
Query: 94 GF 95
F
Sbjct: 214 AF 215
>pdb|2LLS|A Chain A, Solution Structure Of Human Apo-S100a1 C85m
pdb|2LLS|B Chain B, Solution Structure Of Human Apo-S100a1 C85m
Length = 93
Score = 26.2 bits (56), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 96 ISPNDLKRMLAK-----LGESKSIDECRMMIDRFDLNGDGVLSFEEFRIMM 141
+S +LK +L L K +D ++ D NGDG + F+E+ +++
Sbjct: 28 LSKKELKELLQTELSGFLDAQKDVDAVDKVMKELDENGDGEVDFQEYVVLV 78
>pdb|1UHH|A Chain A, Crystal Structure Of Cp-Aequorin
pdb|1UHH|B Chain B, Crystal Structure Of Cp-Aequorin
pdb|1UHJ|A Chain A, Crystal Structure Of Br-Aequorin
pdb|1UHJ|B Chain B, Crystal Structure Of Br-Aequorin
Length = 191
Score = 26.2 bits (56), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 7/77 (9%)
Query: 28 KNRMGMIVGGGDVLLNEVEVAIESLDKDGDGFLDLEDLVGLIEGASAEEKLKDLREAFGL 87
KN +I GD L + V DKD +G + L++ + A + +D E F +
Sbjct: 101 KNEPTLIRIWGDALFDIV-------DKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRV 153
Query: 88 YDFDNRGFISPNDLKRM 104
D D G + ++ R
Sbjct: 154 CDIDESGQLDVDEXTRQ 170
>pdb|1XK4|A Chain A, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|B Chain B, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|E Chain E, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|F Chain F, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|I Chain I, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|J Chain J, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|4GGF|A Chain A, Crystal Structure Of Mn2+ Bound Calprotectin
pdb|4GGF|K Chain K, Crystal Structure Of Mn2+ Bound Calprotectin
pdb|4GGF|S Chain S, Crystal Structure Of Mn2+ Bound Calprotectin
pdb|4GGF|U Chain U, Crystal Structure Of Mn2+ Bound Calprotectin
Length = 93
Score = 25.8 bits (55), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Query: 105 LAKLGESKSIDECR-----MMIDRFDLNGDGVLSFEEFRIMM 141
L KL E++S R + D+N DG ++F+EF I++
Sbjct: 34 LKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILV 75
>pdb|1NSH|A Chain A, Solution Structure Of Rabbit Apo-S100a11 (19 Models)
pdb|1NSH|B Chain B, Solution Structure Of Rabbit Apo-S100a11 (19 Models)
Length = 101
Score = 25.8 bits (55), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 10/18 (55%), Positives = 13/18 (72%)
Query: 120 MIDRFDLNGDGVLSFEEF 137
M+ + DLN DG L F+EF
Sbjct: 59 MMKKLDLNSDGQLDFQEF 76
>pdb|2LLU|A Chain A, Post-Translational S-Nitrosylation Is An Endogenous Factor
Fine-Tuning Human S100a1 Protein Properties
pdb|2LLU|B Chain B, Post-Translational S-Nitrosylation Is An Endogenous Factor
Fine-Tuning Human S100a1 Protein Properties
pdb|2LP2|A Chain A, Solution Structure And Dynamics Of Human S100a1 Protein
Modified At Cysteine 85 With Homocysteine Disulfide Bond
Formation In Calcium Saturated Form
pdb|2LP2|B Chain B, Solution Structure And Dynamics Of Human S100a1 Protein
Modified At Cysteine 85 With Homocysteine Disulfide Bond
Formation In Calcium Saturated Form
pdb|2LP3|A Chain A, Solution Structure Of S100a1 Ca2+
pdb|2LP3|B Chain B, Solution Structure Of S100a1 Ca2+
Length = 93
Score = 25.8 bits (55), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 96 ISPNDLKRMLAK-----LGESKSIDECRMMIDRFDLNGDGVLSFEEFRIMM 141
+S +LK +L L K +D ++ D NGDG + F+E+ +++
Sbjct: 28 LSKKELKELLQTELSGFLDAQKDVDAVDKVMKELDENGDGEVDFQEYVVLV 78
>pdb|1D1O|A Chain A, Cooperativity In Ef-Hand Ca2+-Binding Proteins: Evidence
Of Site-Site Communication From Binding-Induced Changes
In Structure And Dynamics Of N56a Calbindin D9k
Length = 75
Score = 25.8 bits (55), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 9/23 (39%), Positives = 17/23 (73%)
Query: 120 MIDRFDLNGDGVLSFEEFRIMMQ 142
+ + D GDG +SFEEF+++++
Sbjct: 49 LFEELDKAGDGEVSFEEFQVLVK 71
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 25.8 bits (55), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 81 LREAFGLYDFDNRGFISPNDLKRMLAKL---GESKSIDECRMMIDRFDLNGDGVLSFEEF 137
+++ F D D G++ +LK L K + E + ++ D +GDG + EEF
Sbjct: 44 VKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIGAEEF 103
Query: 138 RIMMQ 142
+ M+
Sbjct: 104 QEMVH 108
>pdb|2L0P|A Chain A, Solution Structure Of Human Apo-S100a1 Protein By Nmr
Spectroscopy
pdb|2L0P|B Chain B, Solution Structure Of Human Apo-S100a1 Protein By Nmr
Spectroscopy
Length = 94
Score = 25.8 bits (55), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 96 ISPNDLKRMLAK-----LGESKSIDECRMMIDRFDLNGDGVLSFEEFRIMM 141
+S +LK +L L K +D ++ D NGDG + F+E+ +++
Sbjct: 29 LSKKELKELLQTELSGFLDAQKDVDAVDKVMKELDENGDGEVDFQEYVVLV 79
>pdb|1YX7|A Chain A, Nmr Structure Of Calsensin, Energy Minimized Average
Structure.
pdb|1YX8|A Chain A, Nmr Structure Of Calsensin, 20 Low Energy Structures
Length = 83
Score = 25.8 bits (55), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 80 DLREAFGLYDFDNRGFISPNDLKRMLAKLGESKSIDECRM------MIDRFDLNGDGVLS 133
+L AF D + G+++ +L+ + L K++ + ++ +I D N DG +S
Sbjct: 8 ELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKIS 67
Query: 134 FEEF 137
EEF
Sbjct: 68 KEEF 71
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.143 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,547,610
Number of Sequences: 62578
Number of extensions: 201554
Number of successful extensions: 1990
Number of sequences better than 100.0: 364
Number of HSP's better than 100.0 without gapping: 306
Number of HSP's successfully gapped in prelim test: 58
Number of HSP's that attempted gapping in prelim test: 612
Number of HSP's gapped (non-prelim): 881
length of query: 142
length of database: 14,973,337
effective HSP length: 89
effective length of query: 53
effective length of database: 9,403,895
effective search space: 498406435
effective search space used: 498406435
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 46 (22.3 bits)