BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 032376
         (142 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q68RJ7|ACH92_ONCMY Neuronal acetylcholine receptor subunit alpha-9-II OS=Oncorhynchus
           mykiss PE=2 SV=1
          Length = 550

 Score = 31.2 bits (69), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 24/52 (46%)

Query: 21  PQRRAKKLKKPNTKQNNKNSTSTSSSVGFGIEKMEPLWRCVQGCGACCKLDK 72
           PQR  K   + +  ++ KN  S+S   GF   +  PL  C +    CC  D+
Sbjct: 411 PQRHPKPRHQHHITRDEKNHLSSSKYEGFESNRNLPLGDCCKEAPPCCPEDE 462


>sp|A7ZAI1|IOLA_BACA2 Methylmalonate semialdehyde dehydrogenase [acylating] OS=Bacillus
           amyloliquefaciens (strain FZB42) GN=iolA PE=3 SV=1
          Length = 487

 Score = 30.0 bits (66), Expect = 4.6,   Method: Composition-based stats.
 Identities = 15/43 (34%), Positives = 24/43 (55%)

Query: 13  VVLAAQQRPQRRAKKLKKPNTKQNNKNSTSTSSSVGFGIEKME 55
           ++   QQ  Q+  ++L +  T +N KN+T     VG GIE +E
Sbjct: 71  ILFNYQQLLQQNKEELARLITLENGKNTTEALGEVGRGIENVE 113


>sp|Q925D8|TS1R3_MOUSE Taste receptor type 1 member 3 OS=Mus musculus GN=Tas1r3 PE=2 SV=2
          Length = 858

 Score = 29.3 bits (64), Expect = 7.6,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query: 107 KSTRNCCSDTIKAIYGSRSKELDTFNCAICSSD 139
           K   +CC D +    GS  K  D F C  C+ D
Sbjct: 517 KGFHSCCYDCVDCKAGSYRKHPDDFTCTPCNQD 549


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.317    0.130    0.410 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,674,224
Number of Sequences: 539616
Number of extensions: 2175006
Number of successful extensions: 5458
Number of sequences better than 100.0: 8
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 5451
Number of HSP's gapped (non-prelim): 9
length of query: 142
length of database: 191,569,459
effective HSP length: 105
effective length of query: 37
effective length of database: 134,909,779
effective search space: 4991661823
effective search space used: 4991661823
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)