BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032378
(142 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q2KIP8|HACD2_BOVIN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 2 OS=Bos taurus GN=PTPLB PE=2 SV=2
Length = 254
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 77/147 (52%), Gaps = 9/147 (6%)
Query: 1 MQWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLR 60
+Q R + +VQ S+ + +AW + E+IRY FY + + P+ + + R
Sbjct: 109 IQVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTFSLLNHLPYLIKWAR 168
Query: 61 YTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFFAGLP------FSYYNVVQVVFVMY 114
YT+FI LYP+GV GE+L + A P++++ +++ LP F YY + ++ + Y
Sbjct: 169 YTLFIVLYPMGVSGELLTIYAALPFVRQAGLYS---ISLPNKYNFSFDYYAFLILIMISY 225
Query: 115 PFAWIKLYSHMLKQRGSKLGKRQEKKK 141
+ +LY HM+ QR L +E KK
Sbjct: 226 IPLFPQLYFHMIHQRRKILSHTEEHKK 252
>sp|Q5RBK3|HACD2_PONAB Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 2 OS=Pongo abelii GN=PTPLB PE=2 SV=1
Length = 255
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 76/146 (52%), Gaps = 9/146 (6%)
Query: 2 QWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLRY 61
Q R + +VQ S+ + +AW + E+IRY FY + + P+ + + RY
Sbjct: 111 QVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTFSLLNHLPYLIKWARY 170
Query: 62 TMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFFAGLP------FSYYNVVQVVFVMYP 115
T+FI LYP+GV GE+L + A P++++ +++ LP F YY + ++ + Y
Sbjct: 171 TLFIVLYPMGVSGELLTIYAALPFVRQAGLYS---ISLPNKYNFSFDYYAFLILIMISYI 227
Query: 116 FAWIKLYSHMLKQRGSKLGKRQEKKK 141
+ +LY HM+ QR L +E KK
Sbjct: 228 PIFPQLYFHMIHQRRKILSHTEEHKK 253
>sp|Q6Y1H2|HACD2_HUMAN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 2 OS=Homo sapiens GN=PTPLB PE=1 SV=1
Length = 254
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 76/146 (52%), Gaps = 9/146 (6%)
Query: 2 QWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLRY 61
Q R + +VQ S+ + +AW + E+IRY FY + + P+ + + RY
Sbjct: 110 QVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTFSLLNHLPYLIKWARY 169
Query: 62 TMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFFAGLP------FSYYNVVQVVFVMYP 115
T+FI LYP+GV GE+L + A P++++ +++ LP F YY + ++ + Y
Sbjct: 170 TLFIVLYPMGVSGELLTIYAALPFVRQAGLYS---ISLPNKYNFSFDYYAFLILIMISYI 226
Query: 116 FAWIKLYSHMLKQRGSKLGKRQEKKK 141
+ +LY HM+ QR L +E KK
Sbjct: 227 PIFPQLYFHMIHQRRKILSHTEEHKK 252
>sp|Q9D3B1|HACD2_MOUSE Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 2 OS=Mus musculus GN=Ptplb PE=2 SV=1
Length = 254
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 76/146 (52%), Gaps = 9/146 (6%)
Query: 2 QWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLRY 61
Q R + +VQ S+ + +AW + E+IRY FY + + P+ + + RY
Sbjct: 110 QVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTFSLLNHLPYIIKWARY 169
Query: 62 TMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFFAGLP------FSYYNVVQVVFVMYP 115
T+FI LYP+GV GE+L + A P++++ +++ LP F Y+ + ++ + Y
Sbjct: 170 TLFIVLYPMGVTGELLTIYAALPFVRQAGLYS---ISLPNKYNFSFDYHAFLILIMISYI 226
Query: 116 FAWIKLYSHMLKQRGSKLGKRQEKKK 141
+ +LY HM+ QR L +E KK
Sbjct: 227 PLFPQLYFHMIHQRRKVLSHTEEHKK 252
>sp|Q9QY80|HACD1_MOUSE Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 1 OS=Mus musculus GN=Ptpla PE=2 SV=1
Length = 281
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 3/132 (2%)
Query: 1 MQWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLR 60
+Q R + I +Q+ S+ + ++W + E+ RY FY + + PH++ + R
Sbjct: 136 VQVSSRIFMVWLITHSIKPIQNEESVVLFLVSWTVTEITRYSFYTFSLLDHLPHFIKWAR 195
Query: 61 YTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFFA---GLPFSYYNVVQVVFVMYPFA 117
Y +FI LYP+GV GE+L + A PY+K+ +F+ + F YY + + Y
Sbjct: 196 YNLFIILYPVGVAGELLTIYAALPYVKKSGMFSVRLPNKYNVSFDYYYFLLITMASYIPL 255
Query: 118 WIKLYSHMLKQR 129
+ +LY HML+QR
Sbjct: 256 FPQLYFHMLRQR 267
>sp|Q8K2C9|HACD3_MOUSE Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 3 OS=Mus musculus GN=ptplad1 PE=1 SV=2
Length = 362
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 77/145 (53%), Gaps = 9/145 (6%)
Query: 1 MQWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLR 60
+Q+ GR + + ++Q+ +F F +W IE+ RYPFY L+ I LT+LR
Sbjct: 219 IQFLGRNFILFLVFGTMEEMQNKAVVFFVFYSWSAIEIFRYPFYMLSCIDMDWKVLTWLR 278
Query: 61 YTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFFAGLP------FSYYNVVQVVFVMY 114
YTM+IPLYP+G L E + + Q+ P E F+ F P FS++ +QV VM
Sbjct: 279 YTMWIPLYPLGCLSEAVAVIQSIPVFNESGRFS-FTLPYPVKMKVRFSFF--LQVYLVML 335
Query: 115 PFAWIKLYSHMLKQRGSKLGKRQEK 139
+ H+ KQR + G++++K
Sbjct: 336 FLGLYINFRHLYKQRRRRYGQKKKK 360
>sp|Q4W1W1|HACD1_CANFA Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 1 OS=Canis familiaris GN=PTPLA PE=2 SV=1
Length = 249
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 3/132 (2%)
Query: 1 MQWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLR 60
+Q R + I +Q+ S+ + +AW + E+ RY FY + + P+++ + R
Sbjct: 104 VQVSSRIFMVWLITHSIKPIQNEESVVLFLVAWTVTEITRYSFYTFSLLDHLPYFIKWAR 163
Query: 61 YTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFFA---GLPFSYYNVVQVVFVMYPFA 117
Y FI LYP+GV+GE+L + A PY+K+ +F+ + F YY + + Y
Sbjct: 164 YNFFIILYPVGVVGELLTIYAALPYVKKTGMFSIRLPNKYNVSFDYYYFLLITMASYIPL 223
Query: 118 WIKLYSHMLKQR 129
+ +LY HML+QR
Sbjct: 224 FPQLYFHMLRQR 235
>sp|Q9N1R5|HACD1_SHEEP Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 1 OS=Ovis aries GN=PTPLA PE=2 SV=1
Length = 288
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 71/133 (53%), Gaps = 5/133 (3%)
Query: 1 MQWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLR 60
+Q R + I +Q+ S+ + +AW + E+ RY FY + + P+++ + R
Sbjct: 143 VQVSSRIFMVWLVTHSIKPIQNEESVVLFLVAWTVTEITRYSFYTFSLLDHLPYFIKWAR 202
Query: 61 YTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFA----NFFAGLPFSYYNVVQVVFVMYPF 116
Y FI LYP+GV GE+L + A PY+K+ +F+ N + + F YY + + Y
Sbjct: 203 YNFFIILYPVGVAGELLTIYAALPYVKKTGMFSIRLPNKY-NVSFDYYYFLLITMASYIP 261
Query: 117 AWIKLYSHMLKQR 129
+ +LY HML+QR
Sbjct: 262 LFPQLYFHMLRQR 274
>sp|Q7SY06|HADC_DANRE Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase OS=Danio rerio GN=ptplad1 PE=2 SV=2
Length = 359
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 3/131 (2%)
Query: 1 MQWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLR 60
+Q GR V + +Q+ P +F F W IE+ RYPFY L I LT+LR
Sbjct: 216 IQVMGRNFILFVIFGSLEDMQNKPVVFFVFYLWSTIEIFRYPFYMLACIDTEWKLLTWLR 275
Query: 61 YTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFF---AGLPFSYYNVVQVVFVMYPFA 117
YT+++PLYP+GVL E + + Q+ P E + + GL S+ ++Q+ V+
Sbjct: 276 YTIWMPLYPLGVLAEAVAVIQSIPIFDETKLLSIPLPKATGLSLSFSYILQLYLVVMFLG 335
Query: 118 WIKLYSHMLKQ 128
+ H+ KQ
Sbjct: 336 LFINFRHLFKQ 346
>sp|B0YJ81|HACD1_HUMAN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 1 OS=Homo sapiens GN=PTPLA PE=1 SV=1
Length = 288
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 69/132 (52%), Gaps = 3/132 (2%)
Query: 1 MQWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLR 60
+Q R + I +Q+ S+ + +AW + E+ RY FY + + P+++ + R
Sbjct: 143 VQVSSRIFMVWLITHSIKPIQNEESVVLFLVAWTVTEITRYSFYTFSLLDHLPYFIKWAR 202
Query: 61 YTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFFA---GLPFSYYNVVQVVFVMYPFA 117
Y FI LYP+GV GE+L + A P++K+ +F+ + F YY + + Y
Sbjct: 203 YNFFIILYPVGVAGELLTIYAALPHVKKTGMFSIRLPNKYNVSFDYYYFLLITMASYIPL 262
Query: 118 WIKLYSHMLKQR 129
+ +LY HML+QR
Sbjct: 263 FPQLYFHMLRQR 274
>sp|Q5ZM57|HACD_CHICK Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase OS=Gallus gallus GN=PTPLAD1 PE=2 SV=1
Length = 362
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 76/147 (51%), Gaps = 9/147 (6%)
Query: 1 MQWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLR 60
+Q GR V + ++Q +F F W +IE+ RYP+Y L+ +G LT+LR
Sbjct: 219 IQVFGRNFILFVVLGSLEEMQSKAVVFFLFYFWSIIELFRYPYYMLSCMGIEWKPLTWLR 278
Query: 61 YTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFFAGLPFSYYNVVQVVFV--MYPFA- 117
YT +IPLYP+G L E + L Q+ P E F+ GLP +Q F+ MY A
Sbjct: 279 YTSWIPLYPLGGLAEAVCLIQSIPIFSETGKFS---LGLPNPLNVTIQFSFLLQMYLIAL 335
Query: 118 WIKL---YSHMLKQRGSKLGKRQEKKK 141
++ L + ++ KQR LG ++ K K
Sbjct: 336 FLGLFVNFRYLYKQRKQHLGPKKRKMK 362
>sp|Q5NVQ2|PTAD1_PONAB Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 3 OS=Pongo abelii GN=PTPLAD1 PE=2 SV=1
Length = 364
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 73/145 (50%), Gaps = 9/145 (6%)
Query: 1 MQWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLR 60
+Q GR + + ++Q+ +F F W IE+ RY FY L I LT+LR
Sbjct: 221 IQLLGRNFILFIIFGTMEEMQNKAVVFFVFYLWSAIEIFRYSFYMLTCIDMDWEVLTWLR 280
Query: 61 YTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFFAGLP------FSYYNVVQVVFVMY 114
YT++IPLYP+G L E + + Q+ P E F+ F P FS++ +Q+ +M
Sbjct: 281 YTLWIPLYPLGCLAEAVSVVQSIPIFNETGRFS-FTLPYPVKIKVRFSFF--LQIYLIMI 337
Query: 115 PFAWIKLYSHMLKQRGSKLGKRQEK 139
+ H+ KQR + G++++K
Sbjct: 338 FLGLYINFRHLYKQRRRRYGQKKKK 362
>sp|Q9P035|HACD3_HUMAN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 3 OS=Homo sapiens GN=PTPLAD1 PE=1 SV=2
Length = 362
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 73/145 (50%), Gaps = 9/145 (6%)
Query: 1 MQWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLR 60
+Q GR + + ++Q+ +F F W IE+ RY FY L I LT+LR
Sbjct: 219 IQLLGRNFILFIIFGTMEEMQNKAVVFFVFYLWSAIEIFRYSFYMLTCIDMDWKVLTWLR 278
Query: 61 YTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFFAGLP------FSYYNVVQVVFVMY 114
YT++IPLYP+G L E + + Q+ P E F+ F P FS++ +Q+ +M
Sbjct: 279 YTLWIPLYPLGCLAEAVSVIQSIPIFNETGRFS-FTLPYPVKIKVRFSFF--LQIYLIMI 335
Query: 115 PFAWIKLYSHMLKQRGSKLGKRQEK 139
+ H+ KQR + G++++K
Sbjct: 336 FLGLYINFRHLYKQRRRRYGQKKKK 360
>sp|A7YY55|HACD3_BOVIN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 3 OS=Bos taurus GN=PTPLAD1 PE=2 SV=1
Length = 362
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 74/144 (51%), Gaps = 9/144 (6%)
Query: 2 QWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLRY 61
Q GR + + ++Q+ +F F W +E+ RYPFY L+ I LT+LRY
Sbjct: 220 QLLGRNFILFIIFGTMEEMQNKAVVFFVFYIWSTVEIFRYPFYMLSCIDMDWKVLTWLRY 279
Query: 62 TMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFFAGLP------FSYYNVVQVVFVMYP 115
T++IPLYP+G L E + + Q+ P E F+ F P FS++ +Q+ ++
Sbjct: 280 TVWIPLYPMGCLAEAVSVIQSIPVFNETGRFS-FTLPYPVKIKVRFSFF--LQIYLILLF 336
Query: 116 FAWIKLYSHMLKQRGSKLGKRQEK 139
+ ++ KQR + G++++K
Sbjct: 337 LGLYVNFRYLYKQRRRRFGQKKKK 360
>sp|O17040|HACD_CAEEL Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase hpo-8 OS=Caenorhabditis elegans GN=hpo-8
PE=3 SV=2
Length = 218
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 66/116 (56%), Gaps = 4/116 (3%)
Query: 30 FLAWCLIEVIRYPFYALNTIGA-CPHWLTYLRYTMFIPLYPIGVLGEMLLLNQAFPYMKE 88
+AW + EVIRY FYAL+ + P++L YLRYT+F LYP+GV GE+L L + + E
Sbjct: 103 LVAWSVTEVIRYSFYALSVLKQPIPYFLLYLRYTLFYVLYPMGVSGELLTLFASLNEVDE 162
Query: 89 KNIFANFFA---GLPFSYYNVVQVVFVMYPFAWIKLYSHMLKQRGSKLGKRQEKKK 141
K I + S++ V+ + + Y + +LY +M+ QR LG +KK+
Sbjct: 163 KKILTLEMPNRLNMGISFWWVLIIAALSYIPGFPQLYFYMIGQRKKILGGGSKKKQ 218
>sp|Q5VWC8|HACD4_HUMAN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 4 OS=Homo sapiens GN=PTPLAD2 PE=1 SV=1
Length = 232
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 76/139 (54%), Gaps = 9/139 (6%)
Query: 8 LFFLVTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLRYTMFIPL 67
LF ++T+ E +VQ+ + + F+ W L++++RY + L+ IG LT+L T+++P+
Sbjct: 98 LFVVITSQE--EVQEKYVVCVLFVFWNLLDMVRYTYSMLSVIGISYAVLTWLSQTLWMPI 155
Query: 68 YPIGVLGEMLLLNQAFPYMKEKNIFANFFAGLPFS---YYNVVQVVFVMYPFAWIKL-YS 123
YP+ VL E + Q+ PY + F + LPF Y+ V +++M F + YS
Sbjct: 156 YPLCVLAEAFAIYQSLPYFES---FGTYSTKLPFDLSIYFPYVLKIYLMMLFIGMYFTYS 212
Query: 124 HMLKQRGSKLGKRQEKKKK 142
H+ +R LG KKKK
Sbjct: 213 HLYSERRDILGIFPIKKKK 231
>sp|O14346|HACD_SCHPO Probable very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=SPBC19C2.15c PE=3 SV=2
Length = 208
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 62/122 (50%), Gaps = 11/122 (9%)
Query: 20 VQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLRYTMFIPLYPIGVLGEMLLL 79
++ P +AW + E+IRY FYA N G P +LT+LRY F+ LYPIG E LL+
Sbjct: 97 IEGSPIYLSMIIAWSITEIIRYAFYAFNLNGDIPAFLTWLRYNTFLILYPIGAGSEFLLV 156
Query: 80 NQAFPYMKEKNIFANFFAGLPFSYYNVVQVVFVMYPFAWIKLYSHMLKQRGSKLGKRQEK 139
++ I A + L + ++ + YP +Y+HML QR K+ KR
Sbjct: 157 LKS-------RIAAQYVWSLNKLLWPILMSI---YPPGLYIMYTHMLAQR-RKISKRAAA 205
Query: 140 KK 141
++
Sbjct: 206 RR 207
>sp|Q5ZEJ0|PAS2B_ORYSJ Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase PASTICCINO 2B OS=Oryza sativa subsp.
japonica GN=PAS2B PE=2 SV=1
Length = 221
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 63/119 (52%), Gaps = 14/119 (11%)
Query: 21 QDHPSLFITFL--AWCLIEVIRYPFYAL-NTIGACPHWLTYLRYTMFIPLYPIGVLGEML 77
+ H + +T L +W + E+IRY F+ + T G P WL +LRY+ F+ LYP G+ E+
Sbjct: 97 ETHSHILVTSLVISWSITEIIRYSFFGMKETFGFAPSWLLWLRYSTFMVLYPTGISSEVG 156
Query: 78 LLNQAFPYMKEKNIFA-------NFFAGLPFSYYNVVQVVFVMYPFAWIKLYSHMLKQR 129
L+ A PYMK + NF FSY +++ + +Y ++++ML QR
Sbjct: 157 LIYIALPYMKATEKYCLRMPNKWNF--SFDFSYASILSL--AVYVPGSPHMFTYMLAQR 211
>sp|Q8VZB2|PAS2_ARATH Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase PASTICCINO 2 OS=Arabidopsis thaliana GN=PAS2
PE=1 SV=1
Length = 221
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 4/125 (3%)
Query: 19 QVQDHPSLFITFLAWCLIEVIRYPFYAL-NTIGACPHWLTYLRYTMFIPLYPIGVLGEML 77
+V+ H + ++W + E+IRY F+ +G P W +LRY+ F+ LYP G+ E+
Sbjct: 97 EVRSHFLVTSLVISWSITEIIRYSFFGFKEALGFAPSWHLWLRYSSFLLLYPTGITSEVG 156
Query: 78 LLNQAFPYMKEKNIFANFFAGL---PFSYYNVVQVVFVMYPFAWIKLYSHMLKQRGSKLG 134
L+ A P++K +++ + F ++ +V +Y +Y +ML QR L
Sbjct: 157 LIYLALPHIKTSEMYSVRMPNILNFSFDFFYATILVLAIYVPGSPHMYRYMLGQRKRALS 216
Query: 135 KRQEK 139
K + +
Sbjct: 217 KSKRE 221
>sp|Q7XSZ4|PAS2A_ORYSJ Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase PASTICCINO 2A OS=Oryza sativa subsp.
japonica GN=PAS2A PE=2 SV=2
Length = 221
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 21 QDHPSLFITFL--AWCLIEVIRYPFYAL-NTIGACPHWLTYLRYTMFIPLYPIGVLGEML 77
+ H + +T L +W + E+IRY F+ + G P WL +LRY+ F+ LYP G+ E+
Sbjct: 97 ETHSHILVTSLVISWSITEIIRYSFFGMKEAFGFAPSWLLWLRYSTFMVLYPTGISSEVG 156
Query: 78 LLNQAFPYMKEKN 90
L+ A PYMK
Sbjct: 157 LIYIALPYMKASE 169
>sp|A2AKM2|HACD4_MOUSE Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 4 OS=Mus musculus GN=Ptplad2 PE=2 SV=2
Length = 232
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 9/139 (6%)
Query: 8 LFFLVTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLRYTMFIPL 67
LF ++T+ E +VQ+ + + F+ W L++++RY + L+ IG LT+L T+++P+
Sbjct: 98 LFGVITSQE--EVQEKCVVCVLFILWNLLDMVRYTYSMLSVIGTSYAALTWLSQTLWMPI 155
Query: 68 YPIGVLGEMLLLNQAFPYMKEKNIFANFFAGLPFSYYN----VVQVVFVMYPFAWIKLYS 123
YP+ VL E + Q+ PY + F LPF V+++ +M YS
Sbjct: 156 YPLCVLAEAFTIYQSLPYFES---FGTNSTVLPFDLSTCFPYVLKLYLMMLFIGMYFTYS 212
Query: 124 HMLKQRGSKLGKRQEKKKK 142
H+ +R L K+K
Sbjct: 213 HLYTERKDFLRVFSVKQKN 231
>sp|Q0P5C7|HACD4_BOVIN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 4 OS=Bos taurus GN=PTPLAD2 PE=2 SV=1
Length = 231
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 9/138 (6%)
Query: 8 LFFLVTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLRYTMFIPL 67
LF ++T+ E +VQ+ + + F+ L++++RY + L+ IG LT+ T+++P+
Sbjct: 98 LFMVITSQE--EVQEKYVVCVLFIFRNLLDMVRYTYSMLSVIGISYAVLTWFSQTLWMPI 155
Query: 68 YPIGVLGEMLLLNQAFPYMKEKNIFANFFAGLPFS---YYNVVQVVFVMYPFAWIKL-YS 123
YP+ VL E + Q+ PY + F + LPF Y+ V +++M F + Y+
Sbjct: 156 YPLCVLAEAFTIYQSLPYFES---FGTYSTKLPFDLSFYFPYVLKIYLMMLFVGMYFTYN 212
Query: 124 HMLKQRGSKLGKRQEKKK 141
H+ +R L KKK
Sbjct: 213 HLYSERRDILRVFPNKKK 230
>sp|Q6GNB5|HACD_XENLA Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase OS=Xenopus laevis GN=ptplad2 PE=2 SV=1
Length = 218
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 67/138 (48%), Gaps = 5/138 (3%)
Query: 8 LFFLVTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWLTYLRYTMFIPL 67
LF ++T+ E +VQ + F W L +VIRYP+ L + LT+LR+T +I
Sbjct: 83 LFVVITSQE--EVQSKYIVCALFFIWNLWDVIRYPYDMLAAVDTDYSALTWLRHTWWIVA 140
Query: 68 YPIGVLGEMLLLNQAFPYMKEKNIFANFFA---GLPFSYYNVVQVVFVMYPFAWIKLYSH 124
YP+ VL E + ++ PY + ++ A L F + ++ + V+ P + + S
Sbjct: 141 YPLSVLAEAYTIYESLPYFESLGTYSFKMALPVSLSFHFPYILTLYLVLQPVGMLYICSC 200
Query: 125 MLKQRGSKLGKRQEKKKK 142
+ +R ++ + KK
Sbjct: 201 LWSERKQYFQRKLKLKKN 218
>sp|Q49460|Y468_MYCGE Uncharacterized ABC transporter permease MG468 OS=Mycoplasma
genitalium (strain ATCC 33530 / G-37 / NCTC 10195)
GN=MG468 PE=3 SV=3
Length = 1783
Score = 37.7 bits (86), Expect = 0.021, Method: Composition-based stats.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 14/117 (11%)
Query: 24 PSLFIT--FLAWCLIEVIRYPFYALNTIG--ACPHWLTYLRYTMFIP------LYPIGVL 73
P +FIT L ++E ++ F +L IG + ++ L T FIP L IGVL
Sbjct: 1667 PFIFITCVVLGISMLEEMKRIFISLKAIGYRDVQNLISLL--TFFIPAFVLALLISIGVL 1724
Query: 74 GEMLLLNQAFPYMKEKNIFANFFAGLPFSYYNVV--QVVFVMYPFAWIKLYSHMLKQ 128
+L+ QA + + N F LP+ V+ +FV+ + WIKL S LK+
Sbjct: 1725 AGVLIGIQAVVFNVAQVFLTNVFEFLPYMVGIVLFGVTIFVIGSYFWIKLRSAELKE 1781
>sp|P40857|PHS1_YEAST Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase PHS1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=PHS1 PE=1 SV=1
Length = 217
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 30 FLAWCLIEVIRYPFYALNTI--GACPHWLTYLRYTMFIPLYPIGVLGEM 76
LAW + E++RY +Y + P L LRY +F LYP GV E+
Sbjct: 109 LLAWSITEIVRYLYYFFMLVFKNGAPKILILLRYNLFWILYPTGVASEL 157
>sp|P75109|Y684_MYCPN Uncharacterized ABC transporter permease MG468 homolog OS=Mycoplasma
pneumoniae (strain ATCC 29342 / M129) GN=MPN_684 PE=1
SV=1
Length = 1882
Score = 35.4 bits (80), Expect = 0.12, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 10/115 (8%)
Query: 24 PSLFIT--FLAWCLIEVIRYPFYALNTIGACPHWLTYLRYTMFIP------LYPIGVLGE 75
P +FIT L ++E ++ F +L +IG FIP L I +L
Sbjct: 1766 PFIFITCVVLGISMLEEMKRIFISLKSIGYKDSQNLVSLLCFFIPAFVLSLLISIAILAG 1825
Query: 76 MLLLNQAFPYMKEKNIFANFFAGLPFSYYNVV--QVVFVMYPFAWIKLYSHMLKQ 128
+L+ QA + + N F LP+ V+ +FV+ + WIKL S LK+
Sbjct: 1826 LLVGVQALVFGVAQVFLTNVFEFLPYMVGIVLFGATIFVIGSYFWIKLRSAELKE 1880
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.332 0.145 0.487
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,891,743
Number of Sequences: 539616
Number of extensions: 1899148
Number of successful extensions: 4046
Number of sequences better than 100.0: 30
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 4005
Number of HSP's gapped (non-prelim): 31
length of query: 142
length of database: 191,569,459
effective HSP length: 105
effective length of query: 37
effective length of database: 134,909,779
effective search space: 4991661823
effective search space used: 4991661823
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 55 (25.8 bits)