BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032380
(142 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FUL4|RL24_PRUAV 60S ribosomal protein L24 OS=Prunus avium GN=RPL24 PE=2 SV=1
Length = 186
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 116/131 (88%), Positives = 123/131 (93%), Gaps = 1/131 (0%)
Query: 8 KVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGA 67
+VFLFANSKCKRYFHNRLKPSKLTWT+MYRKQHKKDIA EAVKK+RR+TKKPYSRSIVGA
Sbjct: 29 QVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGA 88
Query: 68 TLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKDEKRAKKAEVTSKSKTQSKGSMPKG 127
TLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKDEK+AKKAEVT K+Q KGS+ KG
Sbjct: 89 TLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVTKSQKSQGKGSIAKG 148
Query: 128 AA-PKGPKLGG 137
A PKGPKLGG
Sbjct: 149 GAQPKGPKLGG 159
>sp|Q42347|RL241_ARATH 60S ribosomal protein L24-1 OS=Arabidopsis thaliana GN=RPL24A PE=1
SV=2
Length = 164
Score = 185 bits (469), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 115/129 (89%), Gaps = 1/129 (0%)
Query: 8 KVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGA 67
+VFLF NSKCKRYFHN+LKPSKL WT+MYRKQHKKD A EAVK++RR+TKKPYSRSIVGA
Sbjct: 29 QVFLFLNSKCKRYFHNKLKPSKLCWTAMYRKQHKKDAAQEAVKRRRRATKKPYSRSIVGA 88
Query: 68 TLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKDEKRAKKAEVTSK-SKTQSKGSMPK 126
TLEVIQK+R EKPEVRDAAREAALREIKERIKKTKDEK+AKK E SK K+Q KG++PK
Sbjct: 89 TLEVIQKKRAEKPEVRDAAREAALREIKERIKKTKDEKKAKKVEYASKQQKSQVKGNIPK 148
Query: 127 GAAPKGPKL 135
AAPK K+
Sbjct: 149 SAAPKAAKM 157
>sp|O65743|RL24_CICAR 60S ribosomal protein L24 OS=Cicer arietinum GN=RPL24 PE=2 SV=1
Length = 164
Score = 181 bits (460), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 104/122 (85%), Positives = 115/122 (94%), Gaps = 1/122 (0%)
Query: 8 KVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGA 67
+VFLF NSKCKRYFHNRLKPSKLTWT+M+RKQHKKD A EAVKK+RR+TKKPYSRSIVGA
Sbjct: 29 QVFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHKKDAAQEAVKKRRRATKKPYSRSIVGA 88
Query: 68 TLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKDEKRAKKAEVTSKS-KTQSKGSMPK 126
TLEVIQK+RTEKPEVRDAAREAALREIKERIKKTKDEK+AKKAEV SK+ K+Q KG++ K
Sbjct: 89 TLEVIQKKRTEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVASKAQKSQGKGNVQK 148
Query: 127 GA 128
GA
Sbjct: 149 GA 150
>sp|P38666|RL242_ARATH 60S ribosomal protein L24-2 OS=Arabidopsis thaliana GN=RPL24B PE=2
SV=2
Length = 163
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 97/122 (79%), Positives = 108/122 (88%), Gaps = 1/122 (0%)
Query: 8 KVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGA 67
+VFLF NSKCKRYFHN+LKPSKL WT+MYRKQHKKD A EAVK++RR+TKKPYSRSIVGA
Sbjct: 29 QVFLFLNSKCKRYFHNKLKPSKLAWTAMYRKQHKKDAAQEAVKRRRRATKKPYSRSIVGA 88
Query: 68 TLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKDEKRAKKAEVTSKSKTQSKGSMPKG 127
TLEVIQK+R EKPEVRDAAREAALREIKERIKKTKDEK+AKK E SK + + K + PK
Sbjct: 89 TLEVIQKKRAEKPEVRDAAREAALREIKERIKKTKDEKKAKKVEFASKQQ-KVKANFPKA 147
Query: 128 AA 129
AA
Sbjct: 148 AA 149
>sp|P50888|RL24_HORVU 60S ribosomal protein L24 OS=Hordeum vulgare GN=RPL24 PE=2 SV=1
Length = 162
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 97/112 (86%), Positives = 105/112 (93%)
Query: 8 KVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGA 67
+VFLFANSKCKRYFHNRLKP+KL WT+MYRKQHKKDI AEA KK+RR+TKKPYSRSIVGA
Sbjct: 29 QVFLFANSKCKRYFHNRLKPAKLCWTAMYRKQHKKDIHAEAAKKRRRTTKKPYSRSIVGA 88
Query: 68 TLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKDEKRAKKAEVTSKSKTQ 119
TLEVIQK+R EKPEVRDAAREAALREIKERIKKTKDEK+AKKAEVT K+Q
Sbjct: 89 TLEVIQKKRAEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVTKSQKSQ 140
>sp|Q7SDU2|RL24_NEUCR 60S ribosomal protein L24 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=rpl-24
PE=3 SV=1
Length = 156
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Query: 8 KVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGA 67
K+F F N K + F R P ++ WT +YR+QHKK I+ E KK+ R T K R+IVGA
Sbjct: 27 KIFRFQNGKSESLFLQRKNPRRIAWTVLYRRQHKKGISEEVAKKRSRRTVKA-QRAIVGA 85
Query: 68 TLEVIQKRRTEKPEVRDAAREAALREIKERIKKTK 102
+LEVI++RR+ +PE R AAR AA++E K + ++T+
Sbjct: 86 SLEVIKERRSMRPEARSAARLAAIKESKAKKQETQ 120
>sp|Q6BNC2|RL24_DEBHA 60S ribosomal protein L24 OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=RPL24 PE=3 SV=1
Length = 156
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Query: 8 KVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGA 67
K+F F +SK FH R P +++WT +YR+QHKK I+ E+ K++ R T K R+IVGA
Sbjct: 27 KIFRFQSSKSASLFHQRKNPRRISWTVLYRRQHKKGISEESAKRRTRKTVKN-QRAIVGA 85
Query: 68 TLEVIQKRRTEKPEVRDAAREA 89
+LE+I++RR++KP R AAR+
Sbjct: 86 SLELIKERRSQKPSDRKAARDV 107
>sp|P38665|RL24_KLULA 60S ribosomal protein L24 OS=Kluyveromyces lactis (strain ATCC 8585
/ CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
GN=RPL24 PE=3 SV=1
Length = 155
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 79/127 (62%), Gaps = 6/127 (4%)
Query: 8 KVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGA 67
K+F F +SK FH R P ++ WT +YR+ HKK I E +K+ R + K R++VGA
Sbjct: 27 KIFRFQSSKSASLFHQRKNPRRIAWTVLYRRHHKKGITEEVARKRTRKSVKA-QRAVVGA 85
Query: 68 TLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKDEKRAKKAEVTSK-----SKTQSKG 122
+LE+I++RR+ KPEVR A R+ + KE+ K K ++++KA++ + SK Q+KG
Sbjct: 86 SLELIKERRSLKPEVRKAQRDEKKKADKEKKKADKAARKSEKAKLAAAQGSKVSKQQAKG 145
Query: 123 SMPKGAA 129
+ K AA
Sbjct: 146 AFQKVAA 152
>sp|Q9DFQ7|RL24_GILMI 60S ribosomal protein L24 OS=Gillichthys mirabilis GN=rpl24 PE=2
SV=2
Length = 157
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 1/130 (0%)
Query: 8 KVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGA 67
KVF F N+KC+ F + P ++ WT +YR++HKK + E KK+ R K + R+I GA
Sbjct: 27 KVFQFLNAKCESAFLAKRNPRQINWTVLYRRKHKKGQSEEVTKKRTRRAVK-FQRAITGA 85
Query: 68 TLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKDEKRAKKAEVTSKSKTQSKGSMPKG 127
+L I +R +KPEVR A RE A+R KE K + K+ A + +KT K + K
Sbjct: 86 SLAEIMAKRNQKPEVRKAQREQAIRAAKESKKAKQATKKPAAASAKTSAKTAQKPKIAKP 145
Query: 128 AAPKGPKLGG 137
P++GG
Sbjct: 146 MKISAPRVGG 155
>sp|Q752U6|RL24_ASHGO 60S ribosomal protein L24 OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RPL24 PE=3 SV=1
Length = 155
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 8 KVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGA 67
KVF F +SK FH R P ++ WT +YR+ HKK I E KK+ R T K R++VGA
Sbjct: 27 KVFRFHSSKSASLFHQRKNPRRIAWTVLYRRHHKKGITEEVAKKRSRKTVKA-QRAVVGA 85
Query: 68 TLEVIQKRRTEKPEVRDAAR 87
+LE+I++RR+ KPE+R A R
Sbjct: 86 SLELIKERRSLKPEIRKAKR 105
>sp|Q9VJY6|RL24_DROME 60S ribosomal protein L24 OS=Drosophila melanogaster GN=RpL24 PE=1
SV=1
Length = 155
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
Query: 8 KVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGA 67
K F F + KC+R + + P K+TWT +YR++H+K I EA KK+ R T+K + R+IVGA
Sbjct: 27 KSFTFLDKKCERSYLMKRNPRKVTWTVLYRRKHRKGIEEEASKKRTRRTQK-FQRAIVGA 85
Query: 68 TLEVIQKRRTEKPEVRDAAREAALREIKER 97
+L I +R KPEVR A R+ A++ KE+
Sbjct: 86 SLAEILAKRNMKPEVRKAQRDQAIKVAKEQ 115
>sp|Q6FXY9|RL24_CANGA 60S ribosomal protein L24 OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=RPL24
PE=3 SV=1
Length = 155
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 8 KVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGA 67
K+F F NSK F R P ++ WT +YR+ HKK I E KK+ R T K R+IVGA
Sbjct: 27 KIFRFQNSKSASLFKQRKNPRRVAWTVLYRRHHKKGITEEVAKKRSRKTVKA-QRAIVGA 85
Query: 68 TLEVIQKRRTEKPEVRDAAR 87
+LE+I++RR+ KPEVR A R
Sbjct: 86 SLELIKERRSLKPEVRKAKR 105
>sp|Q6F444|RL24_PLUXY 60S ribosomal protein L24 OS=Plutella xylostella GN=RpL24 PE=2 SV=1
Length = 155
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
Query: 8 KVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGA 67
K F F NSKC+ R P K+TWT +YR++ KK E KK+ R T+K Y R+IVGA
Sbjct: 27 KNFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEQAKKRTRRTQK-YQRAIVGA 85
Query: 68 TLEVIQKRRTEKPEVRDAAREAALREIKER 97
+L I +R KPEVR A RE A+++ KE+
Sbjct: 86 SLSDIMAKRNMKPEVRKAQREQAIKQAKEQ 115
>sp|P24000|RL24B_YEAST 60S ribosomal protein L24-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL24B PE=1 SV=1
Length = 155
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 8 KVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGA 67
K+F F NSK F R P ++ WT ++RK HKK I E KK+ R T K R I GA
Sbjct: 27 KIFRFQNSKSASLFKQRKNPRRIAWTVLFRKHHKKGITEEVAKKRSRKTVKA-QRPITGA 85
Query: 68 TLEVIQKRRTEKPEVRDAAREAALR 92
+L++I++RR+ KPEVR A RE L+
Sbjct: 86 SLDLIKERRSLKPEVRKANREEKLK 110
>sp|Q962T5|RL24_SPOFR 60S ribosomal protein L24 OS=Spodoptera frugiperda GN=RpL24 PE=2
SV=1
Length = 155
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 8 KVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGA 67
K F F NSKC+ R P K+TWT +YR++ KK E KK+ R T+K Y R+IVGA
Sbjct: 27 KTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEQTKKRTRRTQK-YQRAIVGA 85
Query: 68 TLEVIQKRRTEKPEVRDAAREAALREIKER 97
+L I +R KPEVR A R+ A++ KE+
Sbjct: 86 SLSDIMAKRNMKPEVRKAQRDQAIKAAKEQ 115
>sp|Q8JGR4|RL24_DANRE 60S ribosomal protein L24 OS=Danio rerio GN=rpl24 PE=2 SV=1
Length = 157
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 73/130 (56%), Gaps = 1/130 (0%)
Query: 8 KVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGA 67
KVF F N+KC+ F ++ P ++ WT +YR++HKK + E KK+ R K + R+I GA
Sbjct: 27 KVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEVSKKRTRRAVK-FQRAITGA 85
Query: 68 TLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKDEKRAKKAEVTSKSKTQSKGSMPKG 127
+L I +R +KPEVR A RE A+R KE K + K+ + +K+ K + K
Sbjct: 86 SLAEILAKRNQKPEVRKAQREQAIRAAKEAKKAKQATKKQTTQSSKAPAKSAQKQKIAKP 145
Query: 128 AAPKGPKLGG 137
P++GG
Sbjct: 146 MKVSAPRVGG 155
>sp|P83732|RL24_RAT 60S ribosomal protein L24 OS=Rattus norvegicus GN=Rpl24 PE=1 SV=1
Length = 157
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 8 KVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGA 67
KVF F N+KC+ F ++ P ++ WT +YR++HKK + E KK+ R K + R+I GA
Sbjct: 27 KVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVK-FQRAITGA 85
Query: 68 TLEVIQKRRTEKPEVRDAAREAALR 92
+L I +R +KPEVR A RE A+R
Sbjct: 86 SLADIMAKRNQKPEVRKAQREQAIR 110
>sp|Q8BP67|RL24_MOUSE 60S ribosomal protein L24 OS=Mus musculus GN=Rpl24 PE=2 SV=2
Length = 157
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 8 KVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGA 67
KVF F N+KC+ F ++ P ++ WT +YR++HKK + E KK+ R K + R+I GA
Sbjct: 27 KVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVK-FQRAITGA 85
Query: 68 TLEVIQKRRTEKPEVRDAAREAALR 92
+L I +R +KPEVR A RE A+R
Sbjct: 86 SLADIMAKRNQKPEVRKAQREQAIR 110
>sp|P61122|RL24_MACFA 60S ribosomal protein L24 OS=Macaca fascicularis GN=RPL24 PE=2 SV=1
Length = 157
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 8 KVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGA 67
KVF F N+KC+ F ++ P ++ WT +YR++HKK + E KK+ R K + R+I GA
Sbjct: 27 KVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVK-FQRAITGA 85
Query: 68 TLEVIQKRRTEKPEVRDAAREAALR 92
+L I +R +KPEVR A RE A+R
Sbjct: 86 SLADIMAKRNQKPEVRKAQREQAIR 110
>sp|P83731|RL24_HUMAN 60S ribosomal protein L24 OS=Homo sapiens GN=RPL24 PE=1 SV=1
Length = 157
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 8 KVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGA 67
KVF F N+KC+ F ++ P ++ WT +YR++HKK + E KK+ R K + R+I GA
Sbjct: 27 KVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVK-FQRAITGA 85
Query: 68 TLEVIQKRRTEKPEVRDAAREAALR 92
+L I +R +KPEVR A RE A+R
Sbjct: 86 SLADIMAKRNQKPEVRKAQREQAIR 110
>sp|Q66WF5|RL24_FELCA 60S ribosomal protein L24 OS=Felis catus GN=RPL24 PE=2 SV=1
Length = 157
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 8 KVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGA 67
KVF F N+KC+ F ++ P ++ WT +YR++HKK + E KK+ R K + R+I GA
Sbjct: 27 KVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVK-FQRAITGA 85
Query: 68 TLEVIQKRRTEKPEVRDAAREAALR 92
+L I +R +KPEVR A RE A+R
Sbjct: 86 SLADIMAKRNQKPEVRKAQREQAIR 110
>sp|Q862I1|RL24_BOVIN 60S ribosomal protein L24 OS=Bos taurus GN=RPL24 PE=2 SV=2
Length = 157
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 8 KVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGA 67
KVF F N+KC+ F ++ P ++ WT +YR++HKK + E KK+ R K + R+I GA
Sbjct: 27 KVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVK-FQRAITGA 85
Query: 68 TLEVIQKRRTEKPEVRDAAREAALR 92
+L I +R +KPEVR A RE A+R
Sbjct: 86 SLADIMAKRNQKPEVRKAQREQAIR 110
>sp|Q92354|RL24A_SCHPO 60S ribosomal protein L24-A OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl24a PE=3 SV=1
Length = 149
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 67/104 (64%), Gaps = 8/104 (7%)
Query: 8 KVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGA 67
KVF F N K + F R P +L+WT +YR+ HKK I+ E KK+ R T K + R IVGA
Sbjct: 27 KVFRFVNKKSESLFLQRKNPRRLSWTVLYRRMHKKGISEEHAKKRTRRTVK-HQRGIVGA 85
Query: 68 TLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKDEKRAKKAE 111
L+VI+++R ++PEVR AAR AAL K+ KD+K A ++E
Sbjct: 86 NLDVIKEKRNQRPEVRAAARAAAL-------KQRKDKKAASESE 122
>sp|O74884|RL24B_SCHPO 60S ribosomal protein L24-B OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl24b PE=1 SV=1
Length = 149
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
Query: 8 KVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGA 67
KVF F N K + F R P +L+WT +YR+ HKK I+ E KK+ R T K + R IVGA
Sbjct: 27 KVFRFVNKKSESLFLQRKNPRRLSWTVLYRRMHKKGISEEHAKKRTRRTVK-HQRGIVGA 85
Query: 68 TLEVIQKRRTEKPEVRDAAREAALREIKER 97
L+VI+++R ++PEVR AAR AAL++ K++
Sbjct: 86 NLDVIKEKRNQRPEVRAAARAAALKQRKDK 115
>sp|Q8ISQ3|RL24_BRABE 60S ribosomal protein L24 OS=Branchiostoma belcheri GN=RPL24 PE=2
SV=1
Length = 154
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 78/135 (57%), Gaps = 14/135 (10%)
Query: 8 KVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGA 67
+V+ F N+KC+ F + P ++TWT +YR++HKK E KK+ R T K + R+I GA
Sbjct: 27 RVYTFLNAKCEASFLMKRNPREITWTVLYRRKHKKGQQEEIQKKRSRRTAK-FQRAITGA 85
Query: 68 TLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKDEKRAKKAEVTSKSKTQSKGSMPKG 127
+L I +R +KPEVR A RE A++ KE+ K + KR K+ +++ + PK
Sbjct: 86 SLTEIMAKRNQKPEVRKAQREQAVKAAKEKKKADQVGKR--------KAPAKARATAPKT 137
Query: 128 AAPK-----GPKLGG 137
APK P++GG
Sbjct: 138 KAPKTVKAAAPRVGG 152
>sp|P04449|RL24A_YEAST 60S ribosomal protein L24-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL24A PE=1 SV=1
Length = 155
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 8 KVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGA 67
K+F F NSK F R P ++ WT ++RK HKK I E KK+ R T K R I GA
Sbjct: 27 KIFRFQNSKSASLFKQRKNPRRIAWTVLFRKHHKKGITEEVAKKRSRKTVKA-QRPITGA 85
Query: 68 TLEVIQKRRTEKPEVRDAAR 87
+L++I++RR+ KPEVR A R
Sbjct: 86 SLDLIKERRSLKPEVRKANR 105
>sp|Q6Y263|RL24_PAGMA 60S ribosomal protein L24 OS=Pagrus major GN=rpl24 PE=2 SV=1
Length = 157
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 72/130 (55%), Gaps = 1/130 (0%)
Query: 8 KVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGA 67
KVF F N+KC+ F + P ++ WT +YR++HKK + E KK+ R K + R+I GA
Sbjct: 27 KVFQFLNAKCESAFLAKRNPRQINWTVLYRRKHKKGQSEEVAKKRTRRAVK-FQRAITGA 85
Query: 68 TLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKDEKRAKKAEVTSKSKTQSKGSMPKG 127
+L I +R +KPEVR A RE A+R KE K + K+ + +KT K + K
Sbjct: 86 SLAEIMAKRNQKPEVRKAQREQAIRAAKEAKKAKQAAKKPAAPSAKASTKTAQKPKIAKP 145
Query: 128 AAPKGPKLGG 137
P++GG
Sbjct: 146 MKISAPRVGG 155
>sp|Q90YU3|RL24_ICTPU 60S ribosomal protein L24 OS=Ictalurus punctatus GN=rpl24 PE=2 SV=1
Length = 157
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 8 KVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGA 67
KVF F N+KC+ F + P ++ WT +YR++HKK + E KK+ R K + R+I GA
Sbjct: 27 KVFQFLNAKCESAFLTKRNPRQINWTVLYRRKHKKGQSEEVTKKRTRRAVK-FQRAITGA 85
Query: 68 TLEVIQKRRTEKPEVRDAARE 88
+L I +R +KPEVR A RE
Sbjct: 86 SLAEILAKRNQKPEVRKAQRE 106
>sp|Q6C4U6|RL24_YARLI 60S ribosomal protein L24 OS=Yarrowia lipolytica (strain CLIB 122 /
E 150) GN=RPL24 PE=3 SV=1
Length = 155
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 8 KVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGA 67
K+F F +SK F R P ++ WT +YR++HKK I E KK+ R + K R IVGA
Sbjct: 27 KIFRFYSSKTASLFKQRKNPRRIAWTVLYRRKHKKGITEEVSKKRSRKSVKAV-RGIVGA 85
Query: 68 TLEVIQKRRTEKPEVRDAAR 87
+L+VI+++R +PE R+A R
Sbjct: 86 SLDVIKEKRNARPETRNATR 105
>sp|Q54VN6|RL24_DICDI 60S ribosomal protein L24 OS=Dictyostelium discoideum GN=rpl24 PE=3
SV=1
Length = 127
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 8 KVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGA 67
KVF F N+K + F ++ P + W+ +YR+ +K + + KK+ K R+IVGA
Sbjct: 27 KVFHFINTKVESLFFRKINPRDIRWSMVYRRIYK-NTTTDVSAKKKARKTKKVERNIVGA 85
Query: 68 TLEVIQKRRTEKPEVRDAAREAALREI 94
+LEVIQ++R +KPEV+ AA E A REI
Sbjct: 86 SLEVIQQKRAQKPEVKQAAAEQAKREI 112
>sp|Q7Z0T8|RL24_SCHJA 60S ribosomal protein L24 OS=Schistosoma japonicum GN=RPL24 PE=2
SV=1
Length = 156
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 10 FLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATL 69
F F N K +R + + P +++WT +YR+++KK ++ E K + K +R I GA+L
Sbjct: 29 FYFINKKSERSHYLKRNPREISWTVLYRRKYKKGMSEEQTKNELSVLTKT-ARGIAGASL 87
Query: 70 EVIQKRRTEKPEVRDAAREAALR 92
I +R +KPEVR A R+ A+R
Sbjct: 88 AEIMAKRNQKPEVRKAMRDQAIR 110
>sp|Q10353|RLP24_SCHPO Ribosome biogenesis protein rlp24 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rlp24 PE=3 SV=1
Length = 192
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 8 KVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIA---AEAVKKKRRSTKKPYSRSI 64
KVF F SKC + F + P K+ WT YRK H K++ A AV RR+ Y R++
Sbjct: 27 KVFRFCRSKCHKNFKMKRNPRKVAWTKAYRKAHGKEMVYDTALAVTAARRNVPVRYDRNV 86
Query: 65 VGATLEVIQK 74
+ TL +++
Sbjct: 87 IATTLNAMKR 96
>sp|P0DJ54|RL24_TETTS 60S ribosomal protein L24 OS=Tetrahymena thermophila (strain SB210)
GN=RPL24 PE=1 SV=1
Length = 158
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
Query: 10 FLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAE-AVKKKRRSTKKPYSRSIVGAT 68
F F K K ++K K+TWT R+ KK A + A KKK+R+ +R+IVG +
Sbjct: 31 FFFLTKKAKCLSLRKVKAQKITWTIARRRLWKKVKATDIAQKKKKRNV--TVARAIVGIS 88
Query: 69 LEVIQKRRTEKPEVRDAAREAALREIKERIKKTKDEKRA 107
LE I +R+ + A E A+RE+K++ ++KRA
Sbjct: 89 LEEINRRKNLDASHKKAEAEKAVRELKQKKANDIEKKRA 127
>sp|Q07915|RLP24_YEAST Ribosome biogenesis protein RLP24 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RLP24 PE=1 SV=1
Length = 199
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 53/104 (50%), Gaps = 7/104 (6%)
Query: 8 KVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKK--KRRSTKKPYSRSIV 65
K F F SKC + F R P KL WT +RK K++A ++ +RR+ Y+R +V
Sbjct: 27 KEFRFCRSKCHKAFKQRRNPRKLKWTKAFRKAAGKELAVDSTLTFAQRRNVPVRYNRELV 86
Query: 66 GATLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKDEKRAKK 109
TL+ + R E E+R RE A + + R K KD R KK
Sbjct: 87 ATTLKAMA--RIE--EIRQ-KRERAFYKNRMRGNKEKDFLRDKK 125
>sp|Q6CNW3|RLP24_KLULA Ribosome biogenesis protein RLP24 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=RLP24 PE=3 SV=1
Length = 198
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 16/119 (13%)
Query: 8 KVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKK--KRRSTKKPYSRSIV 65
K F F SKC + F R P KL WT +RK K++A ++ +RR+ Y+R +V
Sbjct: 27 KEFRFCRSKCHKAFKQRRNPRKLRWTKAFRKAAGKELAVDSTLTFAQRRNVPVRYNRELV 86
Query: 66 GATL-------EVIQKR-------RTEKPEVRDAAREAALREIKERIKKTKDEKRAKKA 110
TL E+ Q+R R + RD R+ AL E + + ++ + A++A
Sbjct: 87 ATTLKAMSRIEEIRQRRERAFYKNRMKGNNERDFLRDKALVESNPELLRLREVELARQA 145
>sp|O22165|RLP24_ARATH Probable ribosome biogenesis protein RLP24 OS=Arabidopsis thaliana
GN=At2g44860 PE=2 SV=1
Length = 159
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 9/100 (9%)
Query: 8 KVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAV--KKKRRSTKKPYSRSIV 65
K+F F SKC + F + P K+ WT +R H KD+ + +K+R+ + Y R++
Sbjct: 27 KIFRFCRSKCHKNFKMKRNPRKVKWTKAFRAAHGKDMTKDTTFEFEKKRNRPERYDRNVT 86
Query: 66 GATLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKDEK 105
TL I+K ++R AREA + I+ R+K K +K
Sbjct: 87 ENTLMAIKK----IAKIR-TAREA--KHIENRLKPNKQKK 119
>sp|Q6FPU0|RLP24_CANGA Ribosome biogenesis protein RLP24 OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=RLP24 PE=3 SV=1
Length = 197
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 8 KVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKK--KRRSTKKPYSRSIV 65
K F F SKC + F R P KL WT +RK K++A ++ +RR+ Y+R +V
Sbjct: 27 KEFRFCRSKCHKNFKQRRNPRKLKWTKAFRKAAGKELAVDSTLTFAQRRNVPVRYNRELV 86
Query: 66 GATLEVIQK 74
TL+ + +
Sbjct: 87 ATTLKAMSR 95
>sp|Q759D1|RLP24_ASHGO Ribosome biogenesis protein RLP24 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RLP24
PE=3 SV=1
Length = 197
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 8 KVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKK--KRRSTKKPYSRSIV 65
K F F SKC + F R P KL WT +RK K++A ++ +RR+ Y+R +V
Sbjct: 27 KEFRFCRSKCHKAFKQRRNPRKLKWTKAFRKAAGKELAVDSTLTFAQRRNVPVRYNRELV 86
Query: 66 GATLEVI 72
TL+ +
Sbjct: 87 ETTLKAM 93
>sp|Q6BH34|RLP24_DEBHA Ribosome biogenesis protein RLP24 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=RLP24 PE=3 SV=1
Length = 203
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 50/102 (49%), Gaps = 9/102 (8%)
Query: 8 KVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKK--KRRSTKKPYSRSIV 65
K F F SKC F R P KL WT +RK K++ ++ RR+ Y+R +V
Sbjct: 27 KEFRFCRSKCHHAFKQRRNPRKLRWTKAFRKAAGKELVVDSTLTFAARRNVPVRYNRDLV 86
Query: 66 GATLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKDEKRA 107
TL+ + R E E+R RE A K R++ KD+K A
Sbjct: 87 ATTLKTMA--RVE--EIRQ-KRERAF--YKNRMRGNKDKKLA 121
>sp|Q7ZTZ2|RLP24_DANRE Probable ribosome biogenesis protein RLP24 OS=Danio rerio
GN=rsl24d1 PE=2 SV=1
Length = 161
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 53/109 (48%), Gaps = 10/109 (9%)
Query: 7 VKVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVK--KKRRSTKKPYSRSI 64
KVF F SKC + F + P K WT +RK K++ + +KRR+T Y+R +
Sbjct: 26 CKVFRFCRSKCHKNFKKKRNPRKTRWTKAFRKSAGKELTVDNSLEFEKRRNTPVKYNREL 85
Query: 65 VGATLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKD-EKRAKKAEV 112
T+E ++K V + R I R+KK K+ EK A +EV
Sbjct: 86 WSKTVEAMRK-------VESIKHKRQARFIMNRLKKGKELEKAADISEV 127
>sp|Q6CF69|RLP24_YARLI Ribosome biogenesis protein RLP24 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=RLP24 PE=3 SV=1
Length = 188
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 8 KVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVK--KKRRSTKKPYSRSIV 65
K F F SKC + F + P KL WT +RK K++ ++ RR Y+R +V
Sbjct: 27 KEFRFCRSKCHKNFKMKRNPRKLRWTKAFRKAAGKEMVVDSTLAFSARRDVPVRYNRDLV 86
Query: 66 GATLEVIQK 74
TLE ++K
Sbjct: 87 EKTLEAMEK 95
>sp|Q9VGN9|RLP24_DROME Probable ribosome biogenesis protein RLP24 OS=Drosophila
melanogaster GN=RpL24-like PE=1 SV=1
Length = 191
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 7 VKVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAV--KKKRRSTKKPYSRSI 64
KVF F KC + F + P K+ WT YRK K++A + +KRR+ YSR
Sbjct: 26 CKVFKFCRGKCHKAFKRKKNPRKVGWTKAYRKAAGKELAIDPSFEFEKRRNVPMKYSRET 85
Query: 65 VGATLEVIQKRRTEKPEVR 83
LE I KR TE E R
Sbjct: 86 WQKGLEAI-KRVTEIKEKR 103
>sp|Q8SSF6|RLP24_ENCCU Probable ribosome biogenesis protein RLP24 OS=Encephalitozoon
cuniculi (strain GB-M1) GN=RPL24 PE=3 SV=1
Length = 155
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 8 KVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAVKKKRRSTKKP--YSRSIV 65
KVF F KC++ F R+ P K+ WT + RK K++ +A+ +P Y R+
Sbjct: 27 KVFRFCRPKCRKLFARRVNPRKVKWTKISRKMANKELCNDAILTFEHRLNEPRMYDRAEA 86
Query: 66 GATLEVI 72
TL I
Sbjct: 87 ERTLSSI 93
>sp|Q5RF04|RLP24_PONAB Probable ribosome biogenesis protein RLP24 OS=Pongo abelii
GN=RSL24D1 PE=2 SV=1
Length = 163
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 7 VKVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAV--KKKRRSTKKPYSRSI 64
KVF F SKC + F R P K+ WT +RK K++ + +KRR+ Y R +
Sbjct: 26 CKVFRFCKSKCHKNFKKRRNPRKVRWTKAFRKAAGKELTVDNSFEFEKRRNEPIKYQREL 85
Query: 65 VGATLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKD 103
T++ + KR E + R A + I R+KK K+
Sbjct: 86 WNKTIDAM-KRVEEIKQKRQA------KFIMNRLKKNKE 117
>sp|Q6P6G7|RLP24_RAT Probable ribosome biogenesis protein RLP24 OS=Rattus norvegicus
GN=Rsl24d1 PE=2 SV=1
Length = 163
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 7 VKVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAV--KKKRRSTKKPYSRSI 64
KVF F SKC + F + P K+ WT +RK K++ + +KRR+ Y R +
Sbjct: 26 CKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAGKELTVDNSFEFEKRRNEPVKYQREL 85
Query: 65 VGATLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKD 103
T++ + +R E+ + R R+A I R+KK K+
Sbjct: 86 WNKTIDAM--KRVEEIKQR---RQAKF--IMNRLKKNKE 117
>sp|Q99L28|RLP24_MOUSE Probable ribosome biogenesis protein RLP24 OS=Mus musculus
GN=Rsl24d1 PE=2 SV=1
Length = 163
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 7 VKVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAV--KKKRRSTKKPYSRSI 64
KVF F SKC + F + P K+ WT +RK K++ + +KRR+ Y R +
Sbjct: 26 CKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAGKELTVDNSFEFEKRRNEPVKYQREL 85
Query: 65 VGATLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKD 103
T++ + KR E + R A + I R+KK K+
Sbjct: 86 WNKTIDAM-KRVEEIKQKRQA------KFIMNRLKKNKE 117
>sp|Q9UHA3|RLP24_HUMAN Probable ribosome biogenesis protein RLP24 OS=Homo sapiens
GN=RSL24D1 PE=1 SV=1
Length = 163
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 7 VKVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAV--KKKRRSTKKPYSRSI 64
KVF F SKC + F + P K+ WT +RK K++ + +KRR+ Y R +
Sbjct: 26 CKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAGKELTVDNSFEFEKRRNEPIKYQREL 85
Query: 65 VGATLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKD 103
T++ + KR E + R A + I R+KK K+
Sbjct: 86 WNKTIDAM-KRVEEIKQKRQA------KFIMNRLKKNKE 117
>sp|Q3SZ12|RLP24_BOVIN Probable ribosome biogenesis protein RLP24 OS=Bos taurus GN=RSL24D1
PE=2 SV=1
Length = 163
Score = 36.6 bits (83), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 7 VKVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAAEAV--KKKRRSTKKPYSRSI 64
KVF F SKC + F + P K+ WT +RK K++ + +KRR+ Y R +
Sbjct: 26 CKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAGKELTVDNSFEFEKRRNEPVKYQREL 85
Query: 65 VGATLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKD 103
T++ + KR E + R A + I R+KK K+
Sbjct: 86 WNKTIDAM-KRVEEIKQKRQA------KFIMNRLKKNKE 117
>sp|O01868|RL24_CAEEL 60S ribosomal protein L24 OS=Caenorhabditis elegans GN=rpl-24.1
PE=3 SV=1
Length = 159
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 8 KVFLFANSKCKRYFHNRLKPSKLTWTSMYRKQHKKDIAA--EAVKKKRRSTKKPYSRSIV 65
KV +F + K + R P + WT +YR ++KK + +KK + + + +R++
Sbjct: 27 KVQIFLSGKALKGAKLRRNPRDIRWTVLYRIKNKKGTHGQEQVTRKKTKKSVQVVNRAVA 86
Query: 66 GATLEVIQKRRTEKPEVRDAAREAALREIKE 96
G +L+ I +R + + R RE A + K+
Sbjct: 87 GLSLDAILAKRNQTEDFRRQQREQAAKIAKD 117
>sp|O42668|TPR1_SCHPO Tetratricopeptide repeat protein 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=tpr1 PE=1 SV=1
Length = 1039
Score = 35.8 bits (81), Expect = 0.076, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Query: 47 EAVKKKRRSTKKPYSRSI---------VGATLEVIQKRRTEKPEVRDAAREAALREIKER 97
+ K + +TK+ R+I V A LE + +R ++ R A EA L+E +ER
Sbjct: 840 QRAKMAKNTTKRQLERAIQAQIEYEKSVAAKLEDARIQREKEKARRLAEEEALLKEKQER 899
Query: 98 IKKTKDEKRAKKAEVTSKSKTQSKGS 123
++ ++E++ + EV K+Q K S
Sbjct: 900 ERQLQEERQKMQEEVLEWRKSQQKAS 925
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.127 0.366
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,042,145
Number of Sequences: 539616
Number of extensions: 1730001
Number of successful extensions: 13019
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 238
Number of HSP's successfully gapped in prelim test: 551
Number of HSP's that attempted gapping in prelim test: 11659
Number of HSP's gapped (non-prelim): 1657
length of query: 142
length of database: 191,569,459
effective HSP length: 105
effective length of query: 37
effective length of database: 134,909,779
effective search space: 4991661823
effective search space used: 4991661823
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)