Query         032383
Match_columns 142
No_of_seqs    128 out of 349
Neff          3.5 
Searched_HMMs 29240
Date          Mon Mar 25 21:55:22 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032383.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032383hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3u5c_X RP37, S28, YS14, 40S ri 100.0 3.9E-76 1.3E-80  456.9  12.6  142    1-142     3-145 (145)
  2 2xzm_L 40S ribosomal protein S 100.0 5.8E-75   2E-79  449.1  14.4  139    1-139     3-141 (142)
  3 3j20_N 30S ribosomal protein S 100.0 1.2E-73   4E-78  443.8  12.9  140    3-142     6-147 (147)
  4 2vqe_L 30S ribosomal protein S 100.0 1.7E-45 5.8E-50  282.7   6.5   91   38-138    25-115 (135)
  5 1jt8_A EIF-1A, probable transl  62.2     4.3 0.00015   29.1   2.3   49   44-103    20-69  (102)
  6 1d7q_A Translation initiation   54.3     8.2 0.00028   29.4   2.7   53   40-103    27-80  (143)
  7 2dgy_A MGC11102 protein; EIF-1  53.7       7 0.00024   28.4   2.2   50   43-103    14-64  (111)
  8 3i4o_A Translation initiation   48.0      11 0.00038   25.8   2.4   47   46-103    16-64  (79)
  9 2wnv_C C1Q chain C, complement  39.7      37  0.0013   24.0   4.2   51   46-103    48-107 (131)
 10 3jxo_A TRKA-N domain protein;   20.1 1.7E+02  0.0058   18.2   6.1   28   71-103    44-71  (86)

No 1  
>3u5c_X RP37, S28, YS14, 40S ribosomal protein S23-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_L 3o30_P 3o2z_P 3u5g_X 3j2k_X 3jyv_L* 1s1h_L* 2zkq_l 3iz6_L
Probab=100.00  E-value=3.9e-76  Score=456.91  Aligned_cols=142  Identities=77%  Similarity=1.262  Sum_probs=140.2

Q ss_pred             CCCCCccchhHHHHhhhhhccccchhhhhhccCCccc-CCCCCCCccceeEEeeeeeccCCCCccccceeEEEEeecCcE
Q 032383            1 MGKTRGMGAGRKLKTHRRTQRWADKSYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKK   79 (142)
Q Consensus         1 ~~k~~Gl~~~rkl~~~r~~~rw~d~~ykk~~lg~~~k-~pl~g~pq~kGivl~~~~~~pKkPNSA~RK~~rV~L~kngk~   79 (142)
                      ||+|+||||||||+++|+++||+|++|+++|||++++ |||+++||++||||+++++||||||||+||||||||++||++
T Consensus         3 ~~k~~Gl~aarkl~~~r~~~rw~dk~ykk~~lg~~~K~~~l~g~pq~kGivl~~~~~~pKkPNSA~RK~arV~L~kngk~   82 (145)
T 3u5c_X            3 KGKPRGLNSARKLRVHRRNNRWAENNYKKRLLGTAFKSSPFGGSSHAKGIVLEKLGIESKQPNSAIRKCVRVQLIKNGKK   82 (145)
T ss_dssp             CSSCCCSSCHHHHHHHHHHHHTTSHHHHHHHHTHHHHSSSSCSSSEEEEEEEEEEBCBCCTTCCCBCCEEEEEETTTCCE
T ss_pred             CCccCcHHHHHHHHHHHHHhhhhhhHHHHHhcCcccccCccCCCCccCeEEEEEeecccCCCCccceeEEEEEEccCCCE
Confidence            6899999999999999999999999999999999988 999999999999999999999999999999999999889999


Q ss_pred             EEEEcCCCCcccCccccCeEEEeeccCCCCccCCCCCceEEEEEecCchhhHhhhhcccCCCC
Q 032383           80 IAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS  142 (142)
Q Consensus        80 vtA~IPg~G~l~~lqeh~~VLV~G~G~~gg~v~DlPGVrykvVrv~gv~l~~l~~gkk~kp~~  142 (142)
                      ||||||||||||||||||+|||+|||++||+++|||||+|+|||||||||+|||+||||||+|
T Consensus        83 vtAyIPg~G~l~~lqEh~~VLV~G~G~~Gg~v~DlPGVrykvVrv~~vsl~al~kgkkekp~~  145 (145)
T 3u5c_X           83 VTAFVPNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGVRFKVVKVSGVSLLALWKEKKEKPRS  145 (145)
T ss_dssp             EEEECCSSSCGGGCCTTCEEEEECCSSSSSCCSSSTTCCEEEEESTTTCHHHHHHTSCCCCCC
T ss_pred             EEEEeCCCCccccCCcCCEEEEEeccccCCccCCCCceeEEEEEECCeeHHHHHhccccCCCC
Confidence            999999999999999999999999999999999999999999999999999999999999986


No 2  
>2xzm_L 40S ribosomal protein S12; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_L 3j0o_L 3j0l_L 3j0p_L 3j0q_L 3iz6_L 3jyv_L* 1s1h_L*
Probab=100.00  E-value=5.8e-75  Score=449.08  Aligned_cols=139  Identities=72%  Similarity=1.197  Sum_probs=137.6

Q ss_pred             CCCCCccchhHHHHhhhhhccccchhhhhhccCCcccCCCCCCCccceeEEeeeeeccCCCCccccceeEEEEeecCcEE
Q 032383            1 MGKTRGMGAGRKLKTHRRTQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKI   80 (142)
Q Consensus         1 ~~k~~Gl~~~rkl~~~r~~~rw~d~~ykk~~lg~~~k~pl~g~pq~kGivl~~~~~~pKkPNSA~RK~~rV~L~kngk~v   80 (142)
                      ||||+||||||||+.+|++|||+|++|+++|||+++|+||+++||++||||+++++||||||||+||||||||++||++|
T Consensus         3 ~~k~~Gl~aarkl~~~r~~~rw~d~~ykk~~l~~~~K~pl~g~pq~kGIvl~~~~~~pKkPNSA~RK~arVqL~kNgk~v   82 (142)
T 2xzm_L            3 VGKPRGIRAGRKLARHRKDQRWADNDFNKRLLGSRWRNPFMGASHAKGLVTEKIGIESKQPNSAVRKCVRVLLRKNSKKI   82 (142)
T ss_dssp             CSSCCCSSCHHHHHHHHHHHGGGCHHHHHHHTTCGGGSTTTTCSEEEEEEEEEEEEECCTTCCCEEEEEEEEETTTCCEE
T ss_pred             CCCcchHHHHHHHHHHHHHhccchhHHHHHhhcccccCcccCCCccceEEEEEEecccCCCCcccccEEEEEEecCCeEE
Confidence            78999999999999999999999999999999999889999999999999999999999999999999999998899999


Q ss_pred             EEEcCCCCcccCccccCeEEEeeccCCCCccCCCCCceEEEEEecCchhhHhhhhcccC
Q 032383           81 AAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEK  139 (142)
Q Consensus        81 tA~IPg~G~l~~lqeh~~VLV~G~G~~gg~v~DlPGVrykvVrv~gv~l~~l~~gkk~k  139 (142)
                      |||||||||||||||||+|||+|||++||+++|||||+|+|||||||||+|||+|||||
T Consensus        83 tAyIPg~G~l~~lqEh~~VLVrG~G~~ggrv~DlPGVrykvVrv~~vsl~al~kgkkek  141 (142)
T 2xzm_L           83 AAFVPMDGCLNFLAENDEVLVAGLGRQGHAVGDIPGVRFKVVCVKGISLLALFKGKKEK  141 (142)
T ss_dssp             EEECCSSSGGGTCCTTCEEEEEESSSSSSCCTTCSSCCEEEEEESSCBHHHHHSTTTCC
T ss_pred             EEEeCCCCcccccccCCEEEEEecccCCCccCCCCCceEEEEEECCeeHHHHhhccccc
Confidence            99999999999999999999999999999999999999999999999999999999998


No 3  
>3j20_N 30S ribosomal protein S12P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=100.00  E-value=1.2e-73  Score=443.81  Aligned_cols=140  Identities=56%  Similarity=0.912  Sum_probs=137.9

Q ss_pred             CCCccchhHHHHhhhhhccccchhhhhhccCCccc-CCCCCCCccceeEEeeeeeccCCCCccccceeEEEEeecCcEEE
Q 032383            3 KTRGMGAGRKLKTHRRTQRWADKSYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIA   81 (142)
Q Consensus         3 k~~Gl~~~rkl~~~r~~~rw~d~~ykk~~lg~~~k-~pl~g~pq~kGivl~~~~~~pKkPNSA~RK~~rV~L~kngk~vt   81 (142)
                      +|+||||||+|+++|++|||+|++|+++|||++.+ +||+++||++||||+++++||||||||+||||||||++||++||
T Consensus         6 ~~~Gl~aarkl~~~r~~~rw~d~~ykk~~lg~~~K~~~l~g~pq~kGIvl~~~~~~pKkPNSA~RK~arV~L~kngk~vt   85 (147)
T 3j20_N            6 APNGEFAGRKLKLKRKKFRWSDIRYKRRVLRLKEKSDPLEGAPQARGIVLEKIAVEAKQPNSGMRKAVRVQLIKNGKVVT   85 (147)
T ss_dssp             SCCCSTBHHHHHHHHHHHHTTSHHHHHHHHTHHHHHSSSTTCSCEEEEEEEEEEEECCSSCCCEEEEEEEEETTTCCEEE
T ss_pred             CCChHHHHHHHHHHHHhhccccHHHHHHHhccccccchhhcCCccceEEEEEeecCCCCCCceeeeEEEEEEccCCcEEE
Confidence            69999999999999999999999999999999988 99999999999999999999999999999999999988999999


Q ss_pred             EEcCCCCcccCccccCeEEEeecc-CCCCccCCCCCceEEEEEecCchhhHhhhhcccCCCC
Q 032383           82 AFVPNDGCLNYIEENDEVLIAGFG-RKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS  142 (142)
Q Consensus        82 A~IPg~G~l~~lqeh~~VLV~G~G-~~gg~v~DlPGVrykvVrv~gv~l~~l~~gkk~kp~~  142 (142)
                      ||||||||||||||||+|||+||| ++||+++|||||+|+||+||||||+|||+||||||++
T Consensus        86 AyIPg~Ghln~lqEh~~VLV~G~gg~~gg~v~DlPGVrykvVkv~~vsl~al~kgkkekp~r  147 (147)
T 3j20_N           86 AFCPGDGAIKFIDEHDEVIIEGIGGPKGGSMGDIPGIRYKVVKVNRVSLKELVKGRKEKPRR  147 (147)
T ss_dssp             EECCSSSGGGTCCTTCEEEEEECSCTTSCCCSSCSSCCEEEEEETTEEHHHHHSTTTCCCCC
T ss_pred             EEcCCchhhcccccCCEEEEeeccCcCCCccCCCCceeEEEEEECCeeHHHHHhcccccCCC
Confidence            999999999999999999999999 9999999999999999999999999999999999985


No 4  
>2vqe_L 30S ribosomal protein S12, 30S ribosomal protein S6; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: i.1.1.1 PDB: 1gix_O* 1hnw_L* 1hnx_L* 1hnz_L* 1hr0_L 1ibk_L* 1ibl_L* 1ibm_L 1j5e_L 1jgo_O* 1jgp_O* 1jgq_O* 1mj1_O* 1ml5_O* 1mvr_O 1n32_L* 1n33_L* 1n34_L 1n36_L 1xmo_L* ...
Probab=100.00  E-value=1.7e-45  Score=282.73  Aligned_cols=91  Identities=36%  Similarity=0.664  Sum_probs=88.4

Q ss_pred             CCCCCCCccceeEEeeeeeccCCCCccccceeEEEEeecCcEEEEEcCCCCcccCccccCeEEEeeccCCCCccCCCCCc
Q 032383           38 KPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGV  117 (142)
Q Consensus        38 ~pl~g~pq~kGivl~~~~~~pKkPNSA~RK~~rV~L~kngk~vtA~IPg~G~l~~lqeh~~VLV~G~G~~gg~v~DlPGV  117 (142)
                      +||+++||++|||+++++++|||||||+|||||||| +||++||||||||||  ||||||+|||+|     |+++|||||
T Consensus        25 ~~l~g~Pq~kGv~l~v~~~~pKKPNSA~RK~arVrL-~ngk~VtAyIPG~Gh--nlqEhs~VLVrG-----grv~DlPGV   96 (135)
T 2vqe_L           25 PALKGAPFRRGVCTVVRTVTPKKPNSALRKVAKVRL-TSGYEVTAYIPGEGH--NLQEHSVVLIRG-----GRVKDLPGV   96 (135)
T ss_dssp             CCSSSCSEEEEEESCCCEECCCTTCCCCEECCEEEE-TTSCEEEEECCSSCC--CCCTTCEEEEEE-----CCCTTSTTC
T ss_pred             CcccCCCCcCeEEEEEEecCCCCCchhheeEEEEEc-CCCCEEEEEcCCCCC--ccCcCCEEEEcC-----CCcCCCCCe
Confidence            899999999999999999999999999999999999 999999999999996  999999999998     799999999


Q ss_pred             eEEEEEecCchhhHhhhhccc
Q 032383          118 RFKVVKVSGVSLLALFKEKKE  138 (142)
Q Consensus       118 rykvVrv~gv~l~~l~~gkk~  138 (142)
                      +|+|||  |++|++-+.++++
T Consensus        97 rykvVr--G~lD~~gv~~R~~  115 (135)
T 2vqe_L           97 RYHIVR--GVYDAAGVKDRKK  115 (135)
T ss_dssp             CEEECT--TSTTSCCCTTCCS
T ss_pred             eEEEEe--EeecCcccccccc
Confidence            999999  8999999998875


No 5  
>1jt8_A EIF-1A, probable translation initiation factor 1A; beta barrel, translation factor; NMR {Methanocaldococcus jannaschii} SCOP: b.40.4.5
Probab=62.23  E-value=4.3  Score=29.10  Aligned_cols=49  Identities=22%  Similarity=0.303  Sum_probs=34.1

Q ss_pred             CccceeEEeeeeeccCCCCccccceeEEEEeecCcEEEEEcCCCCc-ccCccccCeEEEee
Q 032383           44 SHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGC-LNYIEENDEVLIAG  103 (142)
Q Consensus        44 pq~kGivl~~~~~~pKkPNSA~RK~~rV~L~kngk~vtA~IPg~G~-l~~lqeh~~VLV~G  103 (142)
                      -|.-|.|++..      ||.-    .+|+| -||.+++|+|||-=. ---|.+.|.|+|+=
T Consensus        20 ~e~~g~V~~~l------gn~~----~~V~l-~nG~~~la~i~GKmRk~IwI~~GD~VlVe~   69 (102)
T 1jt8_A           20 NEILGIIEQML------GASR----VRVRC-LDGKTRLGRIPGRLKNRIWVREGDVVIVKP   69 (102)
T ss_dssp             CCEEEEEECSS------CSSE----EEEEE-ETTEEEEEECCHHHHHHHCCCSCEEEEECC
T ss_pred             CEEEEEEEEEc------CCCE----EEEEE-CCCCEEEEEEcccceeeEEecCCCEEEEEe
Confidence            35556665544      4543    67899 899999999998421 02377889999974


No 6  
>1d7q_A Translation initiation factor 1A; OB-fold, beta-barrel, RNA-binding protein, gene regulation; NMR {Homo sapiens} SCOP: b.40.4.5
Probab=54.27  E-value=8.2  Score=29.38  Aligned_cols=53  Identities=15%  Similarity=0.166  Sum_probs=38.3

Q ss_pred             CCCCCccceeEEeeeeeccCCCCccccceeEEEEeecCcEEEEEcCCCCc-ccCccccCeEEEee
Q 032383           40 FAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGC-LNYIEENDEVLIAG  103 (142)
Q Consensus        40 l~g~pq~kGivl~~~~~~pKkPNSA~RK~~rV~L~kngk~vtA~IPg~G~-l~~lqeh~~VLV~G  103 (142)
                      +-..-|.-|.|++.+      ||.-    .+|+| -||.+++|+|||-=. ---|.+.|.|||+=
T Consensus        27 ~p~ege~~g~V~e~l------gn~~----f~V~l-~nG~~~La~I~GKmRk~IwI~~GD~VlVe~   80 (143)
T 1d7q_A           27 FKEDGQEYAQVIKML------GNGR----LEAMC-FDGVKRLCHIRGKLRKKVWINTSDIILVGL   80 (143)
T ss_dssp             CCCTTEEEEEEEEEC------SSSE----EEEEE-TTTEEEEEECCSGGGGSCCCCTTCEEEEEC
T ss_pred             CCCCCEEEEEEEEEc------CCCE----EEEEe-CCCCEEEEEecccceeeEEecCCCEEEEee
Confidence            334457777777765      4443    67999 899999999998432 12467899999973


No 7  
>2dgy_A MGC11102 protein; EIF-1A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=53.72  E-value=7  Score=28.36  Aligned_cols=50  Identities=16%  Similarity=0.189  Sum_probs=36.6

Q ss_pred             CCccceeEEeeeeeccCCCCccccceeEEEEeecCcEEEEEcCCCCc-ccCccccCeEEEee
Q 032383           43 SSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGC-LNYIEENDEVLIAG  103 (142)
Q Consensus        43 ~pq~kGivl~~~~~~pKkPNSA~RK~~rV~L~kngk~vtA~IPg~G~-l~~lqeh~~VLV~G  103 (142)
                      .-|.-|.|++..      ||.    -.+|+| -||.+++|+|||-=. ---|.+.|.|+|+=
T Consensus        14 ege~~g~V~~~l------gn~----~f~V~l-~nG~~~la~i~GK~Rk~IwI~~GD~VlVe~   64 (111)
T 2dgy_A           14 NQQQIVRVLRTP------GNN----LHEVET-AQGQRFLVSMPSKYRKNIWIKRGDFLIVDP   64 (111)
T ss_dssp             SSCEEEEEEECC------SSS----EEEEEC-TTSCEEEEECCTTCCSCCCCCSSCEEEEEE
T ss_pred             CCeEEEEEEEeC------CCC----EEEEEe-CCCCEEEEEechhhcccEEEcCCCEEEEEe
Confidence            346667777654      444    467899 899999999998533 12378999999984


No 8  
>3i4o_A Translation initiation factor IF-1; cytoplasm, protein biosynthesis; 1.47A {Mycobacterium tuberculosis} SCOP: b.40.4.5
Probab=47.99  E-value=11  Score=25.83  Aligned_cols=47  Identities=30%  Similarity=0.470  Sum_probs=33.6

Q ss_pred             cceeEEeeeeeccCCCCccccceeEEEEeecCcEEEEEcCCCCccc--CccccCeEEEee
Q 032383           46 AKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLN--YIEENDEVLIAG  103 (142)
Q Consensus        46 ~kGivl~~~~~~pKkPNSA~RK~~rV~L~kngk~vtA~IPg~G~l~--~lqeh~~VLV~G  103 (142)
                      ..|+|++.+      ||+-    .+|+| .||..+.|+|+|-=-.|  -+-+.|.|+|+=
T Consensus        16 ~~G~Vik~l------~n~~----f~V~l-~nG~~~~c~i~GK~Rk~~I~Il~GD~V~ve~   64 (79)
T 3i4o_A           16 VEGRVVEPL------PNAM----FRIEL-ENGHKVLAHISGKMRQHYIRILPEDRVVVEL   64 (79)
T ss_dssp             EEEEEEEEE------TTTE----EEEEE-TTSCEEEEEECHHHHHTTCCCCTTCEEEEEE
T ss_pred             EEEEEEEEc------CCCE----EEEEe-CCCCEEEEEeCcceecCCccCCCCCEEEEEE
Confidence            456666654      5554    46888 89999999999853221  478899999874


No 9  
>2wnv_C C1Q chain C, complement C1Q subcomponent subunit C; immune system, secreted, collagen, recognition, disulfide bond, innate immunity; HET: NAG; 1.25A {Homo sapiens} PDB: 2jg8_C 2wnu_C* 2jg9_C* 1pk6_C
Probab=39.71  E-value=37  Score=23.97  Aligned_cols=51  Identities=20%  Similarity=0.206  Sum_probs=35.5

Q ss_pred             cceeEEeeeeeccCCCCccccceeEEEEeecCcEEEEEcCCCCc---------ccCccccCeEEEee
Q 032383           46 AKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGC---------LNYIEENDEVLIAG  103 (142)
Q Consensus        46 ~kGivl~~~~~~pKkPNSA~RK~~rV~L~kngk~vtA~IPg~G~---------l~~lqeh~~VLV~G  103 (142)
                      ..|+=.=.+.+....       -+.|.|.+||..+.+|....+.         +-.|++.|+|-|+-
T Consensus        48 ~~G~Y~Fs~~~~~~~-------~~~v~L~~Ng~~~~~~~~~~~~~~~~~S~~~~L~L~~GD~V~v~~  107 (131)
T 2wnv_C           48 VPGLYYFVYHASHTA-------NLCVLLYRSGVKVVTFCGHTSKTNQVNSGGVLLRLQVGEEVWLAV  107 (131)
T ss_dssp             SCEEEEEEEEEEESS-------CEEEEEEETTEEEEEEEECCSSSCEEEEEEEEEEECTTCEEEEEE
T ss_pred             cCCEEEEEEEEEECC-------eEEEEEEECCeEEEEEEecCCCcccEEeeeEEEEECCCCEEEEEE
Confidence            567766566665431       4789999999888888652221         34689999998875


No 10 
>3jxo_A TRKA-N domain protein; TRKA K+ channel component, structural genomics, PSI-2-2, Pro structure initiative, joint center for structural genomics; 1.55A {Thermotoga SP}
Probab=20.08  E-value=1.7e+02  Score=18.20  Aligned_cols=28  Identities=18%  Similarity=0.400  Sum_probs=19.4

Q ss_pred             EEEeecCcEEEEEcCCCCcccCccccCeEEEee
Q 032383           71 VQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAG  103 (142)
Q Consensus        71 V~L~kngk~vtA~IPg~G~l~~lqeh~~VLV~G  103 (142)
                      +.+..++. +  ++|....  -|++.|.++|.|
T Consensus        44 ~~I~R~~~-~--~~p~~~~--~l~~GD~l~v~g   71 (86)
T 3jxo_A           44 AAIVRGGV-L--VVPRGDT--EILSGDKLYVIV   71 (86)
T ss_dssp             EEEEETTE-E--ECCCTTC--BCCTTCEEEEEE
T ss_pred             EEEEECCE-E--ECCCCCC--EECCCCEEEEEE
Confidence            34434553 3  3686664  899999999987


Done!