BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032385
(142 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P13934|LEA76_BRANA Late embryogenesis abundant protein 76 OS=Brassica napus PE=2 SV=2
Length = 280
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 11/101 (10%)
Query: 2 ASQQAGQEIPQTNAQTACQPQPVPDAVIQEALDNLASISQSAQNDNTYKTQATNLLQQTG 61
A+Q A ++ +T +T +AV Q+A D ++AQN A ++T
Sbjct: 130 AAQTAQEKARETKDKTGSYLSETGEAVKQKAQDAAQYTKETAQN-------AAQYTKETA 182
Query: 62 EQVKNMAQG----AGEQVKNMAQGAAHAVKNTLGMNADNTD 98
E K+ G GE VK MA GAA AVK+T GM + D
Sbjct: 183 EAGKDKTGGFLSQTGEHVKQMAMGAADAVKHTFGMATEEED 223
>sp|P13939|LEAD7_GOSHI Late embryogenesis abundant protein D-7 OS=Gossypium hirsutum PE=2
SV=1
Length = 136
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 45 NDNTYKTQ--ATNLLQQTGEQVKNMAQGAGEQVKNMAQGAAHAVKNTLGM-NADNTDTTL 101
ND T +T A ++T E + Q AGE+V+N AQGA AVK+T GM +AD +
Sbjct: 69 NDKTKQTAGAARGKAEETKETSGGILQQAGEKVRNAAQGATDAVKHTFGMADADEDEHNY 128
Query: 102 P 102
P
Sbjct: 129 P 129
>sp|O49816|LEA1_CICAR Late embryogenesis abundant protein 1 OS=Cicer arietinum PE=2 SV=1
Length = 177
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 23/43 (53%), Gaps = 11/43 (25%)
Query: 56 LLQQTGEQVKNMAQGAGEQVKNMAQGAAHAVKNTLGMNADNTD 98
LQQTGE+VK MAQGA AVK T GM D+ D
Sbjct: 137 FLQQTGEKVKG-----------MAQGATDAVKQTFGMANDDKD 168
>sp|P83442|LEAD3_DAUCA Late embryogenesis abundant protein Dc3 OS=Daucus carota PE=2 SV=1
Length = 163
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 17/22 (77%), Positives = 17/22 (77%)
Query: 71 AGEQVKNMAQGAAHAVKNTLGM 92
A EQVK MAQGA AVKNT GM
Sbjct: 120 AAEQVKGMAQGATEAVKNTFGM 141
>sp|O49817|LEA2_CICAR Late embryogenesis abundant protein 2 OS=Cicer arietinum PE=2 SV=1
Length = 155
Score = 35.8 bits (81), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 22/43 (51%), Gaps = 11/43 (25%)
Query: 56 LLQQTGEQVKNMAQGAGEQVKNMAQGAAHAVKNTLGMNADNTD 98
LQQTGE+ K MAQGA AVK T GM D+ D
Sbjct: 115 FLQQTGEKAKG-----------MAQGATDAVKQTFGMTNDDQD 146
>sp|Q03968|LEA3_WHEAT Late embryogenesis abundant protein, group 3 OS=Triticum aestivum
PE=2 SV=1
Length = 224
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 20/32 (62%)
Query: 69 QGAGEQVKNMAQGAAHAVKNTLGMNADNTDTT 100
Q AGE V N GA AV NTLGM DNT TT
Sbjct: 174 QQAGETVVNAVVGAKDAVANTLGMGGDNTITT 205
>sp|P14928|LEA1_HORVU ABA-inducible protein PHV A1 OS=Hordeum vulgare GN=HVA1 PE=2 SV=1
Length = 213
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 19/32 (59%)
Query: 69 QGAGEQVKNMAQGAAHAVKNTLGMNADNTDTT 100
Q AGE V N GA AV NTLGM DNT T
Sbjct: 163 QQAGETVVNAVVGAKDAVANTLGMGGDNTSAT 194
>sp|P57989|CSD_PASMU Probable cysteine desulfurase OS=Pasteurella multocida (strain
Pm70) GN=csd PE=3 SV=1
Length = 421
Score = 32.7 bits (73), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 10/85 (11%)
Query: 4 QQAGQEIPQTNAQTACQPQPVPDAVIQEALDNLASISQSA--QNDNTYKTQATNLLQQTG 61
QQA + +A TA +PQ + DA I + QSA + + Y + T L +Q
Sbjct: 38 QQADAVVYLDSAATALKPQVLTDATI--------AFYQSAGSVHRSQYDEKQTALFEQAR 89
Query: 62 EQVKNMAQGAGEQVKNMAQGAAHAV 86
E VKN E+ G HA+
Sbjct: 90 ENVKNFIGAESEETIIWTSGTTHAI 114
>sp|Q3KP31|ZN791_HUMAN Zinc finger protein 791 OS=Homo sapiens GN=ZNF791 PE=2 SV=1
Length = 576
Score = 32.3 bits (72), Expect = 0.90, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 28 VIQEALDNLASISQSAQNDNT---YKTQATNLLQQTGEQVKNMAQGA 71
V+QE NLASI + ++ N +K Q NL TGE++ +G+
Sbjct: 32 VMQETFKNLASIGEKWEDPNVEDQHKNQGRNLRSHTGERLCEGKEGS 78
>sp|P24043|LAMA2_HUMAN Laminin subunit alpha-2 OS=Homo sapiens GN=LAMA2 PE=1 SV=4
Length = 3122
Score = 30.8 bits (68), Expect = 2.9, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Query: 21 PQPVPDAVIQEALDNLASISQSAQNDNTYKTQATNLLQQTG---EQVKNMAQGAGEQVKN 77
PQ P+ +IQ A NL ++ T T+ T +QTG E+ A+ GE +K
Sbjct: 1625 PQRAPERLIQLAEGNLNTLVTEMNELLTRATKVTADGEQTGQDAERTNTRAKSLGEFIKE 1684
Query: 78 MAQGAAHAVKNTLGMN 93
+A+ A + + +N
Sbjct: 1685 LARDAEAVNEKAIKLN 1700
>sp|Q42376|LEA3_MAIZE Late embryogenesis abundant protein, group 3 OS=Zea mays GN=MGL3
PE=2 SV=1
Length = 221
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 2 ASQQAGQEIPQTNAQTACQPQPVPDAVIQEALDNLASISQSAQNDNTY-KTQATNLLQQT 60
A Q+AG E +T Q A + +A Q+A D + + Q A Y K A + ++
Sbjct: 110 AKQKAG-ETTETTKQKAGE---TTEAARQKAADAMEAAKQKAAEAGQYAKDTAVSGKDKS 165
Query: 61 GEQVKNMAQGAGEQVKNMAQGAAHAVKNTLGMNADN 96
G + Q A EQVK+ A G AV +TLGM DN
Sbjct: 166 G----GVIQQATEQVKSAAAGRKDAVMSTLGMGGDN 197
>sp|Q2KZT7|ILVD_BORA1 Dihydroxy-acid dehydratase OS=Bordetella avium (strain 197N)
GN=ilvD PE=3 SV=1
Length = 618
Score = 28.9 bits (63), Expect = 9.2, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 66 NMAQGAGEQVKNMAQGAAHAVKNTLGMNADNTDTTLPIDHSAG 108
++A GAGE + + A V T+ + D T TL +D AG
Sbjct: 367 DVAGGAGEAAQTFYRAAPGGVPTTVAFSQDKTFLTLDLDRKAG 409
>sp|A6W2D2|DNAK_MARMS Chaperone protein DnaK OS=Marinomonas sp. (strain MWYL1) GN=dnaK
PE=3 SV=1
Length = 637
Score = 28.9 bits (63), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 15/85 (17%)
Query: 21 PQPVPDAVIQEALDNLASISQSAQNDNTYKTQATNLLQQTG---EQVKNMAQGAGE---- 73
P+ VP + +D +S SA++ T K Q+ + +G E+V+ M Q A
Sbjct: 466 PRGVPQIEVSFDIDANGILSVSAKDKATGKEQSIVIKSSSGLSDEEVEKMVQDAEANAEE 525
Query: 74 --------QVKNMAQGAAHAVKNTL 90
QV+N A G HA + TL
Sbjct: 526 DRKFEELVQVRNTADGMIHATRKTL 550
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.303 0.117 0.319
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,614,755
Number of Sequences: 539616
Number of extensions: 1914954
Number of successful extensions: 5626
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 100
Number of HSP's that attempted gapping in prelim test: 5545
Number of HSP's gapped (non-prelim): 176
length of query: 142
length of database: 191,569,459
effective HSP length: 105
effective length of query: 37
effective length of database: 134,909,779
effective search space: 4991661823
effective search space used: 4991661823
T: 11
A: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 55 (25.8 bits)