Query 032390
Match_columns 142
No_of_seqs 187 out of 1985
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 22:05:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032390.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032390hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dr5_A Putative O-methyltransf 100.0 7.5E-28 2.6E-32 174.9 13.6 130 1-141 83-213 (221)
2 3c3y_A Pfomt, O-methyltransfer 99.9 1.6E-26 5.3E-31 169.2 14.6 141 1-142 97-237 (237)
3 3r3h_A O-methyltransferase, SA 99.9 1.3E-26 4.4E-31 170.4 11.7 134 1-141 87-220 (242)
4 1sui_A Caffeoyl-COA O-methyltr 99.9 1.1E-25 3.6E-30 165.9 13.4 141 1-142 106-247 (247)
5 3ntv_A MW1564 protein; rossman 99.9 1.4E-25 4.8E-30 163.4 12.6 134 1-141 97-231 (232)
6 3cbg_A O-methyltransferase; cy 99.9 1.4E-24 4.9E-29 158.2 15.7 132 1-141 99-232 (232)
7 3tr6_A O-methyltransferase; ce 99.9 2.2E-24 7.4E-29 155.6 15.3 134 1-141 91-224 (225)
8 2avd_A Catechol-O-methyltransf 99.9 3.9E-24 1.3E-28 154.6 15.5 134 1-141 96-229 (229)
9 3tfw_A Putative O-methyltransf 99.9 1.3E-23 4.3E-28 154.6 15.8 131 1-141 90-225 (248)
10 3duw_A OMT, O-methyltransferas 99.9 2E-23 7E-28 150.4 16.4 133 1-141 85-222 (223)
11 3c3p_A Methyltransferase; NP_9 99.9 1.1E-22 3.9E-27 145.5 10.9 127 1-141 83-209 (210)
12 2hnk_A SAM-dependent O-methylt 99.9 9.3E-22 3.2E-26 143.5 15.9 136 1-142 87-232 (239)
13 2gpy_A O-methyltransferase; st 99.8 7.5E-21 2.6E-25 137.9 10.9 135 1-141 80-214 (233)
14 3u81_A Catechol O-methyltransf 99.8 8E-20 2.7E-24 131.8 12.3 120 1-141 85-213 (221)
15 3cvo_A Methyltransferase-like 99.6 4.4E-16 1.5E-20 111.4 7.1 108 1-126 53-179 (202)
16 2wk1_A NOVP; transferase, O-me 99.5 1.5E-14 5E-19 108.4 8.6 103 11-138 173-278 (282)
17 2b2c_A Spermidine synthase; be 99.5 1.7E-14 5.9E-19 109.5 8.0 121 1-140 134-268 (314)
18 2o07_A Spermidine synthase; st 99.5 3.5E-14 1.2E-18 107.4 9.3 120 1-140 121-255 (304)
19 1uir_A Polyamine aminopropyltr 99.4 2.3E-12 8E-17 97.6 11.6 122 1-140 103-241 (314)
20 1mjf_A Spermidine synthase; sp 99.4 1.7E-12 5.8E-17 96.9 10.7 119 1-140 100-238 (281)
21 1iy9_A Spermidine synthase; ro 99.3 4.3E-12 1.5E-16 94.5 9.4 79 1-85 101-189 (275)
22 1xj5_A Spermidine synthase 1; 99.3 1.2E-11 4E-16 94.6 10.8 83 1-88 146-239 (334)
23 3p9n_A Possible methyltransfer 99.3 2.8E-11 9.4E-16 84.7 10.8 81 1-87 69-155 (189)
24 3fpf_A Mtnas, putative unchara 99.3 1.4E-11 4.9E-16 92.7 9.6 76 1-86 148-223 (298)
25 2qfm_A Spermine synthase; sper 99.3 3.9E-11 1.3E-15 92.4 11.2 124 1-141 213-361 (364)
26 3m6w_A RRNA methylase; rRNA me 99.3 1.3E-10 4.3E-15 92.4 14.0 80 1-88 128-232 (464)
27 1inl_A Spermidine synthase; be 99.3 2.9E-11 1E-15 90.9 9.6 79 1-85 116-205 (296)
28 3m4x_A NOL1/NOP2/SUN family pr 99.3 1.4E-10 4.8E-15 92.0 13.8 81 1-88 132-237 (456)
29 3adn_A Spermidine synthase; am 99.2 1.5E-11 5.2E-16 92.5 6.2 79 1-85 109-198 (294)
30 2igt_A SAM dependent methyltra 99.2 2.5E-10 8.7E-15 87.1 13.0 84 1-87 177-274 (332)
31 2b78_A Hypothetical protein SM 99.2 2.4E-10 8.2E-15 88.8 12.7 83 1-86 237-332 (385)
32 2esr_A Methyltransferase; stru 99.2 4.9E-11 1.7E-15 82.4 7.9 81 1-87 56-140 (177)
33 2as0_A Hypothetical protein PH 99.2 2E-10 6.7E-15 89.4 12.1 83 1-86 242-336 (396)
34 2ift_A Putative methylase HI07 99.2 4.7E-11 1.6E-15 84.7 7.0 82 1-87 78-165 (201)
35 3v97_A Ribosomal RNA large sub 99.2 8.4E-11 2.9E-15 97.7 9.4 81 1-87 564-659 (703)
36 3c0k_A UPF0064 protein YCCW; P 99.2 1.3E-10 4.3E-15 90.5 9.9 83 1-86 245-340 (396)
37 2fpo_A Methylase YHHF; structu 99.2 8.8E-11 3E-15 83.3 8.1 80 1-87 79-162 (202)
38 2fhp_A Methylase, putative; al 99.2 2E-10 6.8E-15 79.6 9.8 84 1-87 69-156 (187)
39 1wxx_A TT1595, hypothetical pr 99.2 1.6E-10 5.5E-15 89.6 10.2 82 1-86 233-326 (382)
40 3axs_A Probable N(2),N(2)-dime 99.2 1E-10 3.4E-15 91.2 8.4 77 1-84 79-157 (392)
41 2pt6_A Spermidine synthase; tr 99.2 1.5E-10 5E-15 88.1 9.1 79 1-85 142-230 (321)
42 3gjy_A Spermidine synthase; AP 99.1 9E-11 3.1E-15 89.1 7.3 80 1-86 115-201 (317)
43 2i7c_A Spermidine synthase; tr 99.1 2.3E-10 7.7E-15 85.5 9.1 79 1-85 104-192 (283)
44 1ixk_A Methyltransferase; open 99.1 3.3E-10 1.1E-14 85.8 10.0 80 1-88 145-249 (315)
45 3ajd_A Putative methyltransfer 99.1 1.1E-09 3.8E-14 81.1 12.7 84 1-88 110-214 (274)
46 3o4f_A Spermidine synthase; am 99.1 1.3E-10 4.6E-15 87.2 7.2 120 1-139 109-243 (294)
47 3njr_A Precorrin-6Y methylase; 99.1 7.9E-10 2.7E-14 78.6 10.7 78 1-87 79-156 (204)
48 4dmg_A Putative uncharacterize 99.1 4.7E-10 1.6E-14 87.5 10.3 78 2-87 239-328 (393)
49 1sqg_A SUN protein, FMU protei 99.1 9.4E-10 3.2E-14 86.5 12.1 117 1-141 272-427 (429)
50 3e05_A Precorrin-6Y C5,15-meth 99.1 2.3E-10 8E-15 80.8 7.4 79 1-87 66-144 (204)
51 1xdz_A Methyltransferase GIDB; 99.1 1.6E-09 5.4E-14 78.5 12.0 78 1-84 96-173 (240)
52 3lpm_A Putative methyltransfer 99.1 2E-10 6.8E-15 84.3 6.9 78 1-83 74-174 (259)
53 1ws6_A Methyltransferase; stru 99.1 9E-10 3.1E-14 75.1 9.4 80 2-86 66-148 (171)
54 2frn_A Hypothetical protein PH 99.1 3.2E-10 1.1E-14 84.3 7.6 79 1-88 150-228 (278)
55 3orh_A Guanidinoacetate N-meth 99.1 1.6E-10 5.5E-15 83.9 5.7 84 1-91 85-176 (236)
56 3tos_A CALS11; methyltransfera 99.1 7.9E-10 2.7E-14 81.6 9.3 102 19-138 150-253 (257)
57 2yxl_A PH0851 protein, 450AA l 99.0 7.4E-10 2.5E-14 87.6 9.0 82 1-88 286-392 (450)
58 3c6k_A Spermine synthase; sper 99.0 4.7E-10 1.6E-14 86.8 7.0 81 1-84 230-330 (381)
59 3k6r_A Putative transferase PH 99.0 2.5E-10 8.7E-15 85.2 5.2 76 1-85 150-225 (278)
60 1l3i_A Precorrin-6Y methyltran 99.0 2.3E-09 7.9E-14 74.0 9.7 79 1-86 57-135 (192)
61 3eey_A Putative rRNA methylase 99.0 3.9E-10 1.3E-14 79.0 5.5 78 1-84 49-138 (197)
62 3jwh_A HEN1; methyltransferase 99.0 1.3E-09 4.5E-14 77.5 8.1 126 1-134 55-194 (217)
63 3hm2_A Precorrin-6Y C5,15-meth 99.0 7.7E-10 2.6E-14 76.0 6.6 79 1-87 51-129 (178)
64 3evz_A Methyltransferase; NYSG 99.0 2.7E-09 9.3E-14 76.4 9.4 76 1-84 81-178 (230)
65 3bwc_A Spermidine synthase; SA 99.0 2.1E-09 7.2E-14 80.9 9.0 79 1-84 121-209 (304)
66 2dul_A N(2),N(2)-dimethylguano 99.0 2.1E-09 7.2E-14 83.4 9.1 76 1-84 73-163 (378)
67 2frx_A Hypothetical protein YE 99.0 1.5E-09 5.3E-14 86.5 8.4 81 1-88 144-249 (479)
68 3mti_A RRNA methylase; SAM-dep 99.0 8.2E-10 2.8E-14 76.6 5.9 77 1-84 46-134 (185)
69 3jwg_A HEN1, methyltransferase 99.0 3.1E-09 1.1E-13 75.6 8.8 126 1-134 55-194 (219)
70 2cmg_A Spermidine synthase; tr 99.0 1.2E-10 4.2E-15 86.1 1.3 72 1-84 96-170 (262)
71 2ozv_A Hypothetical protein AT 98.9 1.5E-09 5.1E-14 79.9 6.8 83 1-83 62-168 (260)
72 4fzv_A Putative methyltransfer 98.9 1.8E-08 6E-13 77.7 13.0 81 2-88 175-287 (359)
73 2b3t_A Protein methyltransfera 98.9 6.8E-09 2.3E-13 76.7 10.1 75 1-84 135-237 (276)
74 3g89_A Ribosomal RNA small sub 98.9 3.5E-09 1.2E-13 77.6 8.3 77 1-83 106-182 (249)
75 3mb5_A SAM-dependent methyltra 98.9 1.1E-09 3.9E-14 79.6 5.3 74 1-84 120-193 (255)
76 3a27_A TYW2, uncharacterized p 98.9 2E-09 6.9E-14 79.8 6.5 76 1-86 145-220 (272)
77 1dus_A MJ0882; hypothetical pr 98.9 2.6E-09 9E-14 73.9 6.2 78 1-86 76-158 (194)
78 4gek_A TRNA (CMO5U34)-methyltr 98.9 3.5E-09 1.2E-13 78.2 7.0 77 1-86 98-179 (261)
79 3hem_A Cyclopropane-fatty-acyl 98.9 9.8E-09 3.3E-13 76.6 9.4 78 1-88 97-186 (302)
80 2bm8_A Cephalosporin hydroxyla 98.9 4.8E-10 1.6E-14 81.6 2.1 75 1-86 111-188 (236)
81 2yx1_A Hypothetical protein MJ 98.9 5.6E-09 1.9E-13 79.7 7.8 76 1-87 218-293 (336)
82 1yzh_A TRNA (guanine-N(7)-)-me 98.9 4.6E-09 1.6E-13 74.7 6.9 78 1-84 67-155 (214)
83 3f4k_A Putative methyltransfer 98.9 5E-09 1.7E-13 76.0 6.9 81 1-88 71-153 (257)
84 3tma_A Methyltransferase; thum 98.9 1E-08 3.5E-13 78.4 8.9 76 1-84 230-316 (354)
85 2qm3_A Predicted methyltransfe 98.9 2.5E-09 8.4E-14 82.6 5.5 78 1-84 197-277 (373)
86 3grz_A L11 mtase, ribosomal pr 98.8 2.3E-09 7.8E-14 75.6 4.6 77 1-87 85-161 (205)
87 3dxy_A TRNA (guanine-N(7)-)-me 98.8 1.5E-08 5E-13 72.9 8.9 78 2-84 61-149 (218)
88 1zx0_A Guanidinoacetate N-meth 98.8 4.6E-09 1.6E-13 75.8 6.1 80 1-87 85-172 (236)
89 2nxc_A L11 mtase, ribosomal pr 98.8 8.8E-09 3E-13 75.5 7.4 77 1-87 144-220 (254)
90 1nv8_A HEMK protein; class I a 98.8 1.2E-08 4.2E-13 76.1 8.1 75 1-84 148-248 (284)
91 2yxd_A Probable cobalt-precorr 98.8 1.1E-07 3.6E-12 65.1 12.1 74 1-86 59-132 (183)
92 4htf_A S-adenosylmethionine-de 98.8 8.8E-09 3E-13 76.1 7.0 80 1-86 92-174 (285)
93 3kkz_A Uncharacterized protein 98.8 7.7E-09 2.6E-13 75.7 6.5 81 1-88 71-153 (267)
94 2b9e_A NOL1/NOP2/SUN domain fa 98.8 5.3E-08 1.8E-12 73.6 11.0 82 1-88 129-237 (309)
95 2fca_A TRNA (guanine-N(7)-)-me 98.8 2.5E-08 8.5E-13 71.2 8.8 78 1-84 64-152 (213)
96 3lbf_A Protein-L-isoaspartate 98.8 6.1E-09 2.1E-13 73.6 5.5 73 1-84 101-173 (210)
97 1o54_A SAM-dependent O-methylt 98.8 4.9E-09 1.7E-13 77.5 5.0 75 1-85 139-213 (277)
98 3dlc_A Putative S-adenosyl-L-m 98.8 1E-08 3.4E-13 72.3 6.4 79 1-86 68-149 (219)
99 3ocj_A Putative exported prote 98.8 4.3E-09 1.5E-13 78.8 4.6 80 1-88 145-230 (305)
100 2fk8_A Methoxy mycolic acid sy 98.8 2.5E-08 8.7E-13 74.8 8.8 78 1-88 115-197 (318)
101 1nkv_A Hypothetical protein YJ 98.8 1.2E-08 4.2E-13 73.9 6.8 80 1-88 61-143 (256)
102 1jsx_A Glucose-inhibited divis 98.8 1.2E-08 4.2E-13 71.7 6.1 74 1-84 91-164 (207)
103 3bt7_A TRNA (uracil-5-)-methyl 98.8 1.6E-08 5.6E-13 77.9 7.1 82 1-86 237-327 (369)
104 3gdh_A Trimethylguanosine synt 98.8 1.1E-09 3.8E-14 79.1 0.4 77 1-85 102-181 (241)
105 1kpg_A CFA synthase;, cyclopro 98.7 4.8E-08 1.6E-12 72.1 9.0 78 1-88 89-171 (287)
106 2yvl_A TRMI protein, hypotheti 98.7 1.2E-08 4E-13 73.7 5.5 75 1-84 115-189 (248)
107 4dcm_A Ribosomal RNA large sub 98.7 1.2E-08 4.1E-13 79.0 5.6 76 1-84 248-333 (375)
108 3lec_A NADB-rossmann superfami 98.7 3E-08 1E-12 72.1 7.2 78 1-85 47-125 (230)
109 3sso_A Methyltransferase; macr 98.7 1.3E-07 4.4E-12 73.9 11.2 127 1-141 249-392 (419)
110 3kr9_A SAM-dependent methyltra 98.7 1.6E-08 5.4E-13 73.3 5.6 79 1-86 41-120 (225)
111 2qy6_A UPF0209 protein YFCK; s 98.7 3.3E-08 1.1E-12 72.9 7.2 81 1-83 98-211 (257)
112 4dzr_A Protein-(glutamine-N5) 98.7 4.4E-09 1.5E-13 74.0 2.2 79 1-84 56-164 (215)
113 2b25_A Hypothetical protein; s 98.7 1.7E-08 5.9E-13 76.6 5.3 76 1-83 132-217 (336)
114 2pwy_A TRNA (adenine-N(1)-)-me 98.7 2.3E-08 7.9E-13 72.5 5.7 74 1-84 123-197 (258)
115 3bus_A REBM, methyltransferase 98.7 4.3E-08 1.5E-12 71.7 6.8 81 1-88 86-169 (273)
116 1g8a_A Fibrillarin-like PRE-rR 98.7 3.3E-08 1.1E-12 70.7 5.8 77 1-84 100-177 (227)
117 2pbf_A Protein-L-isoaspartate 98.7 3E-08 1E-12 70.9 5.5 78 1-84 111-192 (227)
118 1o9g_A RRNA methyltransferase; 98.7 7.5E-09 2.6E-13 75.3 2.3 81 1-83 79-212 (250)
119 1yb2_A Hypothetical protein TA 98.7 1.8E-08 6.1E-13 74.5 4.4 74 1-85 137-211 (275)
120 3dmg_A Probable ribosomal RNA 98.7 3.6E-08 1.2E-12 76.5 6.3 75 1-84 257-339 (381)
121 1dl5_A Protein-L-isoaspartate 98.6 3.9E-08 1.3E-12 74.2 6.0 72 2-84 103-174 (317)
122 3g07_A 7SK snRNA methylphospha 98.6 3.3E-08 1.1E-12 73.7 5.5 88 1-90 72-225 (292)
123 3r0q_C Probable protein argini 98.6 4.1E-08 1.4E-12 75.9 6.2 79 1-88 88-172 (376)
124 3gnl_A Uncharacterized protein 98.6 7.8E-08 2.7E-12 70.4 7.2 78 1-85 47-125 (244)
125 3lcc_A Putative methyl chlorid 98.6 1.9E-08 6.7E-13 72.2 3.9 78 1-86 90-172 (235)
126 3m70_A Tellurite resistance pr 98.6 7.1E-08 2.4E-12 71.2 7.0 74 1-84 144-222 (286)
127 2o57_A Putative sarcosine dime 98.6 5.9E-08 2E-12 71.9 6.5 81 1-88 107-190 (297)
128 3vc1_A Geranyl diphosphate 2-C 98.6 5.7E-08 1.9E-12 72.9 6.5 81 1-88 142-224 (312)
129 3ckk_A TRNA (guanine-N(7)-)-me 98.6 1.4E-07 4.7E-12 68.5 8.1 79 1-84 72-167 (235)
130 2vdv_E TRNA (guanine-N(7)-)-me 98.6 7.3E-08 2.5E-12 70.0 6.7 78 1-83 75-171 (246)
131 1i1n_A Protein-L-isoaspartate 98.6 2.5E-08 8.7E-13 71.2 4.1 74 1-84 104-181 (226)
132 3q7e_A Protein arginine N-meth 98.6 8.1E-08 2.8E-12 73.5 6.4 79 1-87 91-175 (349)
133 3dh0_A SAM dependent methyltra 98.6 8.7E-08 3E-12 67.8 6.0 80 1-88 64-146 (219)
134 3mgg_A Methyltransferase; NYSG 98.6 1.4E-07 4.8E-12 69.1 7.2 80 1-88 63-145 (276)
135 1jg1_A PIMT;, protein-L-isoasp 98.6 1.2E-07 4E-12 68.3 6.5 73 1-84 116-188 (235)
136 1i9g_A Hypothetical protein RV 98.6 5.5E-08 1.9E-12 71.5 4.8 75 1-84 126-202 (280)
137 3htx_A HEN1; HEN1, small RNA m 98.6 4.6E-07 1.6E-11 76.3 10.8 125 1-134 748-900 (950)
138 2h00_A Methyltransferase 10 do 98.6 1.9E-08 6.5E-13 73.2 2.2 59 1-61 91-150 (254)
139 2yxe_A Protein-L-isoaspartate 98.6 9.5E-08 3.3E-12 67.6 5.8 73 1-84 104-176 (215)
140 1ri5_A MRNA capping enzyme; me 98.6 7E-08 2.4E-12 71.2 5.1 79 1-85 89-174 (298)
141 3g5t_A Trans-aconitate 3-methy 98.5 1.7E-07 5.8E-12 69.7 7.2 81 1-83 63-147 (299)
142 1vl5_A Unknown conserved prote 98.5 1.2E-07 4.1E-12 69.0 6.2 78 1-86 61-141 (260)
143 1r18_A Protein-L-isoaspartate( 98.5 5.2E-08 1.8E-12 69.8 4.0 74 1-84 116-193 (227)
144 2jjq_A Uncharacterized RNA met 98.5 1.5E-07 5.1E-12 74.0 6.9 72 1-84 314-386 (425)
145 2xvm_A Tellurite resistance pr 98.5 2.2E-07 7.4E-12 64.6 7.0 75 1-84 56-135 (199)
146 3d2l_A SAM-dependent methyltra 98.5 1.1E-07 3.9E-12 68.1 5.6 74 1-84 56-136 (243)
147 2ex4_A Adrenal gland protein A 98.5 5.8E-08 2E-12 70.0 4.0 78 1-86 104-186 (241)
148 3ofk_A Nodulation protein S; N 98.5 5.9E-08 2E-12 68.6 4.0 74 1-85 75-154 (216)
149 4hc4_A Protein arginine N-meth 98.5 1.2E-07 4E-12 73.6 5.8 79 1-88 108-192 (376)
150 2fyt_A Protein arginine N-meth 98.5 1E-07 3.5E-12 72.7 5.4 76 1-84 89-170 (340)
151 3tm4_A TRNA (guanine N2-)-meth 98.5 1.9E-07 6.4E-12 72.1 6.8 75 1-83 243-328 (373)
152 1wzn_A SAM-dependent methyltra 98.5 2.2E-07 7.6E-12 67.1 6.8 75 1-85 65-145 (252)
153 1uwv_A 23S rRNA (uracil-5-)-me 98.5 2.2E-07 7.5E-12 73.1 7.2 79 1-84 310-388 (433)
154 1ve3_A Hypothetical protein PH 98.5 1E-07 3.5E-12 67.6 4.8 77 1-86 62-143 (227)
155 1xxl_A YCGJ protein; structura 98.5 2.1E-07 7.3E-12 67.1 6.5 78 1-86 45-125 (239)
156 2y1w_A Histone-arginine methyl 98.5 1.5E-07 5.2E-12 71.9 5.8 75 1-84 75-154 (348)
157 1g6q_1 HnRNP arginine N-methyl 98.5 1.6E-07 5.4E-12 71.3 5.8 76 1-84 63-144 (328)
158 1fbn_A MJ fibrillarin homologu 98.5 1.4E-07 4.8E-12 67.8 5.1 77 1-84 100-177 (230)
159 3gu3_A Methyltransferase; alph 98.5 2.1E-07 7.1E-12 68.9 6.0 77 1-87 49-128 (284)
160 3g2m_A PCZA361.24; SAM-depende 98.5 9E-08 3.1E-12 71.2 3.7 79 1-87 106-192 (299)
161 2oo3_A Protein involved in cat 98.5 2E-07 6.9E-12 69.4 5.4 77 1-83 115-196 (283)
162 1y8c_A S-adenosylmethionine-de 98.5 1.9E-07 6.7E-12 66.8 5.2 74 1-84 61-141 (246)
163 3b3j_A Histone-arginine methyl 98.5 1.2E-07 4.2E-12 75.6 4.5 75 1-84 183-262 (480)
164 1vbf_A 231AA long hypothetical 98.4 1.8E-07 6.2E-12 66.8 4.8 71 1-84 94-164 (231)
165 3dli_A Methyltransferase; PSI- 98.4 3.8E-07 1.3E-11 65.6 6.4 72 1-86 65-141 (240)
166 3dtn_A Putative methyltransfer 98.4 1.5E-07 5.1E-12 67.3 4.0 76 1-87 70-150 (234)
167 2ipx_A RRNA 2'-O-methyltransfe 98.4 5.5E-07 1.9E-11 64.6 6.8 75 1-84 104-181 (233)
168 2kw5_A SLR1183 protein; struct 98.4 3.7E-07 1.3E-11 63.8 5.8 78 1-87 53-133 (202)
169 2p8j_A S-adenosylmethionine-de 98.4 2.6E-07 8.8E-12 64.8 5.0 78 1-87 48-130 (209)
170 3uwp_A Histone-lysine N-methyl 98.4 6.6E-07 2.3E-11 70.2 7.6 83 1-88 199-291 (438)
171 3k0b_A Predicted N6-adenine-sp 98.4 4.6E-07 1.6E-11 70.6 6.6 53 1-61 265-317 (393)
172 1u2z_A Histone-lysine N-methyl 98.4 7.2E-07 2.5E-11 70.3 7.7 82 1-88 268-362 (433)
173 2pjd_A Ribosomal RNA small sub 98.4 5.3E-07 1.8E-11 68.7 6.8 73 1-84 222-302 (343)
174 3h2b_A SAM-dependent methyltra 98.4 6.7E-07 2.3E-11 62.5 6.8 73 1-86 65-142 (203)
175 2p7i_A Hypothetical protein; p 98.4 3.6E-07 1.2E-11 65.3 5.4 72 1-85 66-141 (250)
176 2vdw_A Vaccinia virus capping 98.4 1.1E-06 3.8E-11 66.0 8.3 81 1-86 73-170 (302)
177 4fsd_A Arsenic methyltransfera 98.4 4.2E-07 1.5E-11 70.2 6.1 83 1-88 110-206 (383)
178 3ldg_A Putative uncharacterize 98.4 7.3E-07 2.5E-11 69.2 7.4 74 1-82 258-340 (384)
179 3sm3_A SAM-dependent methyltra 98.4 1.9E-07 6.4E-12 66.4 3.7 79 1-86 54-142 (235)
180 1pjz_A Thiopurine S-methyltran 98.4 1.5E-07 5E-12 66.6 2.9 76 1-82 46-137 (203)
181 3ll7_A Putative methyltransfer 98.4 2.8E-07 9.7E-12 72.1 4.5 55 1-61 117-173 (410)
182 2yqz_A Hypothetical protein TT 98.4 5E-07 1.7E-11 65.4 5.4 75 1-84 63-140 (263)
183 3g5l_A Putative S-adenosylmeth 98.3 4.7E-07 1.6E-11 65.5 5.1 73 1-84 69-144 (253)
184 2gb4_A Thiopurine S-methyltran 98.3 5.2E-07 1.8E-11 66.2 5.3 78 1-84 92-190 (252)
185 3dp7_A SAM-dependent methyltra 98.3 6.2E-07 2.1E-11 68.8 5.7 81 1-88 205-290 (363)
186 1nt2_A Fibrillarin-like PRE-rR 98.3 1E-06 3.6E-11 62.7 6.4 77 1-84 83-160 (210)
187 3mcz_A O-methyltransferase; ad 98.3 1.1E-06 3.8E-11 66.7 6.8 81 1-88 205-290 (352)
188 3ldu_A Putative methylase; str 98.3 9.2E-07 3.1E-11 68.7 6.4 53 1-61 259-311 (385)
189 2i62_A Nicotinamide N-methyltr 98.3 2.2E-07 7.6E-12 67.4 2.8 84 1-87 81-200 (265)
190 1wy7_A Hypothetical protein PH 98.3 2.1E-06 7.3E-11 60.2 7.8 69 1-83 74-147 (207)
191 3ujc_A Phosphoethanolamine N-m 98.3 3.4E-07 1.2E-11 66.3 3.7 78 1-88 80-162 (266)
192 3thr_A Glycine N-methyltransfe 98.3 2.1E-06 7.2E-11 63.3 8.1 81 1-85 81-175 (293)
193 2pxx_A Uncharacterized protein 98.3 3.4E-07 1.2E-11 64.2 3.6 75 1-85 67-159 (215)
194 2r3s_A Uncharacterized protein 98.3 8E-07 2.7E-11 66.9 5.7 78 1-87 191-273 (335)
195 3gwz_A MMCR; methyltransferase 98.3 1.7E-06 5.9E-11 66.4 7.5 78 1-88 228-310 (369)
196 1xtp_A LMAJ004091AAA; SGPP, st 98.3 6.7E-07 2.3E-11 64.5 4.9 76 1-86 118-198 (254)
197 3i53_A O-methyltransferase; CO 98.3 9.5E-07 3.2E-11 66.7 5.9 78 1-88 195-277 (332)
198 2f8l_A Hypothetical protein LM 98.3 1E-06 3.5E-11 67.1 5.9 74 1-84 161-255 (344)
199 2p35_A Trans-aconitate 2-methy 98.3 1.5E-06 5.1E-11 62.8 6.3 71 1-85 59-132 (259)
200 2r6z_A UPF0341 protein in RSP 98.3 8.4E-07 2.9E-11 65.4 4.9 57 1-60 107-170 (258)
201 3id6_C Fibrillarin-like rRNA/T 98.3 2E-06 7E-11 62.4 6.9 77 1-84 103-180 (232)
202 3bzb_A Uncharacterized protein 98.3 5E-06 1.7E-10 61.6 9.1 78 1-83 104-203 (281)
203 3hnr_A Probable methyltransfer 98.3 3.3E-07 1.1E-11 64.8 2.5 74 1-87 69-147 (220)
204 3pfg_A N-methyltransferase; N, 98.3 3.5E-07 1.2E-11 66.6 2.7 71 1-85 74-151 (263)
205 3ou2_A SAM-dependent methyltra 98.3 1E-06 3.5E-11 61.9 4.9 73 1-86 70-147 (218)
206 3i9f_A Putative type 11 methyl 98.3 2.6E-06 8.8E-11 57.9 6.8 72 1-88 41-115 (170)
207 1qzz_A RDMB, aclacinomycin-10- 98.3 1.6E-06 5.3E-11 66.4 6.2 76 1-86 208-288 (374)
208 3bgv_A MRNA CAP guanine-N7 met 98.2 1.1E-06 3.6E-11 65.8 5.0 82 1-85 59-155 (313)
209 3m33_A Uncharacterized protein 98.2 2.9E-07 1E-11 65.8 1.8 67 1-82 72-139 (226)
210 1tw3_A COMT, carminomycin 4-O- 98.2 2E-06 7E-11 65.4 6.2 76 2-87 210-290 (360)
211 2gs9_A Hypothetical protein TT 98.2 7.7E-07 2.6E-11 62.6 3.6 73 1-86 58-133 (211)
212 4df3_A Fibrillarin-like rRNA/T 98.2 1.7E-06 5.7E-11 63.0 5.4 77 1-84 104-181 (233)
213 3e8s_A Putative SAM dependent 98.2 2.6E-06 9E-11 60.0 6.3 76 1-86 76-153 (227)
214 2ip2_A Probable phenazine-spec 98.2 1.1E-06 3.6E-11 66.4 4.4 78 1-88 193-275 (334)
215 4hg2_A Methyltransferase type 98.2 6.1E-07 2.1E-11 66.0 2.5 69 1-83 63-133 (257)
216 3e23_A Uncharacterized protein 98.2 1.3E-06 4.5E-11 61.5 4.1 70 1-85 67-141 (211)
217 2aot_A HMT, histamine N-methyl 98.2 9.4E-06 3.2E-10 60.1 9.0 81 2-84 85-171 (292)
218 2a14_A Indolethylamine N-methy 98.2 8.6E-07 2.9E-11 64.9 3.2 84 1-87 80-199 (263)
219 3bkx_A SAM-dependent methyltra 98.2 2.5E-06 8.7E-11 62.3 5.6 82 1-87 70-161 (275)
220 3fzg_A 16S rRNA methylase; met 98.2 3E-05 1E-09 54.8 10.8 75 1-85 75-152 (200)
221 3ccf_A Cyclopropane-fatty-acyl 98.2 1.5E-06 5E-11 63.9 4.1 71 1-85 81-154 (279)
222 2qe6_A Uncharacterized protein 98.2 1.2E-05 4.2E-10 59.4 9.1 83 1-87 106-198 (274)
223 3bkw_A MLL3908 protein, S-aden 98.2 1.6E-06 5.5E-11 62.0 4.2 74 1-85 68-144 (243)
224 2oyr_A UPF0341 protein YHIQ; a 98.2 1.1E-06 3.8E-11 64.8 3.4 56 1-62 112-175 (258)
225 1ne2_A Hypothetical protein TA 98.1 4.5E-06 1.5E-10 58.3 6.3 66 1-84 76-146 (200)
226 1x19_A CRTF-related protein; m 98.1 7.2E-06 2.5E-10 62.5 7.9 76 1-86 216-296 (359)
227 3cgg_A SAM-dependent methyltra 98.1 2.4E-06 8.3E-11 58.7 4.7 72 1-85 70-147 (195)
228 3ggd_A SAM-dependent methyltra 98.1 4.4E-06 1.5E-10 60.0 6.2 78 1-84 80-162 (245)
229 3l8d_A Methyltransferase; stru 98.1 2E-06 6.8E-11 61.5 4.1 74 1-85 77-153 (242)
230 3bxo_A N,N-dimethyltransferase 98.1 3.1E-06 1.1E-10 60.3 4.4 72 1-86 64-142 (239)
231 4gqb_A Protein arginine N-meth 98.1 4.1E-06 1.4E-10 68.8 5.5 77 1-86 387-468 (637)
232 2okc_A Type I restriction enzy 98.1 4.5E-06 1.5E-10 65.8 5.6 75 1-83 210-305 (445)
233 3p2e_A 16S rRNA methylase; met 98.0 2.5E-06 8.4E-11 61.4 2.8 76 1-83 50-137 (225)
234 2ar0_A M.ecoki, type I restric 98.0 1.6E-05 5.4E-10 64.3 7.5 77 1-83 213-310 (541)
235 2g72_A Phenylethanolamine N-me 98.0 5.7E-06 2E-10 61.1 4.1 85 1-86 96-216 (289)
236 2ld4_A Anamorsin; methyltransf 97.9 3.7E-06 1.3E-10 57.6 2.2 73 5-87 26-103 (176)
237 1ej0_A FTSJ; methyltransferase 97.9 9.1E-06 3.1E-10 54.7 3.9 68 1-85 49-136 (180)
238 3q87_B N6 adenine specific DNA 97.9 6.2E-06 2.1E-10 56.5 3.0 66 1-85 46-123 (170)
239 3v97_A Ribosomal RNA large sub 97.9 1.7E-05 5.8E-10 65.9 5.9 78 1-83 258-345 (703)
240 1af7_A Chemotaxis receptor met 97.9 1.2E-05 4.1E-10 59.7 4.4 78 1-84 139-251 (274)
241 3iv6_A Putative Zn-dependent a 97.9 1.4E-05 4.8E-10 59.0 4.5 74 1-84 69-147 (261)
242 1zq9_A Probable dimethyladenos 97.8 3.2E-05 1.1E-09 57.5 6.2 53 1-62 52-104 (285)
243 1vlm_A SAM-dependent methyltra 97.8 2.1E-05 7.1E-10 55.7 4.5 69 3-86 69-140 (219)
244 3giw_A Protein of unknown func 97.8 4.4E-05 1.5E-09 56.8 6.2 85 1-87 107-202 (277)
245 3cc8_A Putative methyltransfer 97.8 9.6E-06 3.3E-10 57.2 2.2 72 1-85 56-130 (230)
246 4e2x_A TCAB9; kijanose, tetron 97.7 2E-05 6.7E-10 61.2 3.9 75 1-85 131-208 (416)
247 2avn_A Ubiquinone/menaquinone 97.7 2.4E-05 8.2E-10 56.8 4.1 71 1-85 78-152 (260)
248 3mq2_A 16S rRNA methyltransfer 97.7 1.1E-05 3.6E-10 57.1 2.1 75 1-84 53-139 (218)
249 2h1r_A Dimethyladenosine trans 97.7 5.3E-05 1.8E-09 56.7 5.3 52 1-62 66-117 (299)
250 1p91_A Ribosomal RNA large sub 97.7 1.3E-05 4.4E-10 58.4 1.8 67 1-84 111-177 (269)
251 1g60_A Adenine-specific methyl 97.7 5.9E-05 2E-09 55.3 5.1 53 27-84 4-73 (260)
252 1m6y_A S-adenosyl-methyltransf 97.6 8.3E-05 2.8E-09 55.9 5.9 58 1-62 52-109 (301)
253 3lkd_A Type I restriction-modi 97.6 0.00031 1.1E-08 56.8 9.4 76 2-82 251-355 (542)
254 3ege_A Putative methyltransfer 97.6 1.1E-05 3.6E-10 58.8 0.3 69 1-84 58-129 (261)
255 1boo_A Protein (N-4 cytosine-s 97.6 9.5E-05 3.3E-09 55.9 5.3 54 26-84 13-83 (323)
256 1eg2_A Modification methylase 97.5 0.00017 5.7E-09 54.6 6.1 54 26-84 37-105 (319)
257 3khk_A Type I restriction-modi 97.5 4.7E-05 1.6E-09 61.6 2.9 75 2-82 286-392 (544)
258 3ua3_A Protein arginine N-meth 97.5 0.00031 1.1E-08 58.3 7.3 82 1-85 448-534 (745)
259 2ih2_A Modification methylase 97.5 3.7E-05 1.3E-09 59.5 1.8 65 1-83 66-162 (421)
260 3dou_A Ribosomal RNA large sub 97.4 0.00029 9.8E-09 49.2 6.0 72 1-84 49-138 (191)
261 2xyq_A Putative 2'-O-methyl tr 97.4 8.5E-05 2.9E-09 55.6 3.2 62 1-84 94-170 (290)
262 2zig_A TTHA0409, putative modi 97.4 0.00029 9.9E-09 52.5 5.6 54 26-84 20-96 (297)
263 4a6d_A Hydroxyindole O-methylt 97.3 0.00037 1.3E-08 53.1 6.1 75 2-87 206-285 (353)
264 3hp7_A Hemolysin, putative; st 97.3 1.7E-05 5.7E-10 59.4 -1.9 72 1-83 110-183 (291)
265 3lst_A CALO1 methyltransferase 97.3 7.2E-05 2.5E-09 56.8 1.5 74 2-88 211-289 (348)
266 2plw_A Ribosomal RNA methyltra 97.3 0.00038 1.3E-08 48.2 5.1 67 1-84 50-153 (201)
267 3lcv_B Sisomicin-gentamicin re 97.2 0.0024 8.1E-08 47.3 8.8 75 1-86 158-237 (281)
268 3opn_A Putative hemolysin; str 97.1 2.8E-05 9.7E-10 56.2 -2.0 72 1-83 62-135 (232)
269 2zfu_A Nucleomethylin, cerebra 97.1 0.00023 7.8E-09 49.9 2.7 63 1-86 88-152 (215)
270 3pvc_A TRNA 5-methylaminomethy 97.1 0.00027 9.3E-09 58.3 3.3 56 27-84 149-210 (689)
271 4azs_A Methyltransferase WBDD; 97.0 0.0013 4.5E-08 53.2 6.2 52 1-58 90-141 (569)
272 2nyu_A Putative ribosomal RNA 96.9 0.00096 3.3E-08 45.8 4.5 70 2-84 58-144 (196)
273 3gru_A Dimethyladenosine trans 96.9 0.0023 8E-08 47.8 6.7 52 1-62 74-125 (295)
274 2wa2_A Non-structural protein 96.8 7.4E-05 2.5E-09 55.4 -2.0 74 1-84 105-192 (276)
275 3vyw_A MNMC2; tRNA wobble urid 96.8 0.0016 5.6E-08 49.0 5.0 52 27-83 167-224 (308)
276 3s1s_A Restriction endonucleas 96.7 0.0019 6.5E-08 54.5 5.2 77 1-83 350-463 (878)
277 2p41_A Type II methyltransfera 96.5 0.00036 1.2E-08 52.4 -0.1 72 1-84 105-190 (305)
278 3frh_A 16S rRNA methylase; met 96.5 0.0037 1.3E-07 45.7 5.0 74 1-85 128-206 (253)
279 1fp1_D Isoliquiritigenin 2'-O- 96.5 0.00093 3.2E-08 51.1 1.9 69 2-88 236-309 (372)
280 1wg8_A Predicted S-adenosylmet 96.5 0.0038 1.3E-07 46.4 5.1 55 1-62 46-100 (285)
281 3reo_A (ISO)eugenol O-methyltr 96.5 0.00073 2.5E-08 51.7 1.1 69 2-88 230-303 (368)
282 3p9c_A Caffeic acid O-methyltr 96.4 0.0015 5.2E-08 49.9 2.5 69 2-88 228-301 (364)
283 2oxt_A Nucleoside-2'-O-methylt 96.4 0.00014 4.9E-09 53.5 -3.3 74 1-84 97-184 (265)
284 3tqs_A Ribosomal RNA small sub 96.3 0.0051 1.8E-07 44.9 5.0 53 1-61 53-106 (255)
285 1fp2_A Isoflavone O-methyltran 96.1 0.0021 7.3E-08 48.6 2.2 70 1-88 214-291 (352)
286 3ufb_A Type I restriction-modi 96.0 0.017 5.9E-07 46.4 7.0 85 1-89 256-369 (530)
287 3fut_A Dimethyladenosine trans 96.0 0.013 4.4E-07 43.2 5.6 62 1-72 70-131 (271)
288 1qam_A ERMC' methyltransferase 95.8 0.013 4.4E-07 42.2 4.9 51 1-61 54-104 (244)
289 3ps9_A TRNA 5-methylaminomethy 95.5 0.062 2.1E-06 44.1 8.4 56 27-84 157-218 (676)
290 1zg3_A Isoflavanone 4'-O-methy 95.2 0.0097 3.3E-07 45.0 2.5 69 2-88 220-296 (358)
291 1yub_A Ermam, rRNA methyltrans 94.7 0.0017 5.8E-08 46.8 -2.8 73 1-83 53-143 (245)
292 1qyr_A KSGA, high level kasuga 94.5 0.068 2.3E-06 38.8 5.5 62 1-68 45-107 (252)
293 3cg0_A Response regulator rece 94.5 0.23 7.9E-06 31.3 7.6 67 1-74 11-80 (140)
294 3ftd_A Dimethyladenosine trans 94.3 0.064 2.2E-06 38.8 4.9 72 1-84 56-130 (249)
295 2qr3_A Two-component system re 94.2 0.52 1.8E-05 29.5 8.8 75 1-83 5-86 (140)
296 3lua_A Response regulator rece 94.0 0.57 1.9E-05 29.5 8.7 65 1-73 6-75 (140)
297 3hzh_A Chemotaxis response reg 93.9 0.65 2.2E-05 30.1 9.0 69 1-74 38-108 (157)
298 3to5_A CHEY homolog; alpha(5)b 93.8 0.23 7.9E-06 32.4 6.6 65 1-72 14-80 (134)
299 2gkg_A Response regulator homo 93.8 0.56 1.9E-05 28.6 8.3 75 1-83 7-86 (127)
300 3uzu_A Ribosomal RNA small sub 93.8 0.19 6.5E-06 37.0 6.7 32 2-38 71-102 (279)
301 3i42_A Response regulator rece 93.7 0.69 2.4E-05 28.5 9.4 66 1-74 5-72 (127)
302 3grc_A Sensor protein, kinase; 93.7 0.75 2.6E-05 28.9 9.3 65 1-73 8-74 (140)
303 3f6c_A Positive transcription 93.7 0.47 1.6E-05 29.6 7.8 74 1-82 3-78 (134)
304 3kht_A Response regulator; PSI 93.6 0.81 2.8E-05 28.9 10.1 67 1-73 7-75 (144)
305 2rjn_A Response regulator rece 93.6 0.87 3E-05 29.2 9.8 66 1-74 9-76 (154)
306 3rqi_A Response regulator prot 93.6 1 3.6E-05 30.1 9.8 73 1-82 9-83 (184)
307 3tka_A Ribosomal RNA small sub 93.5 0.069 2.4E-06 40.7 3.9 55 1-61 84-138 (347)
308 3eul_A Possible nitrate/nitrit 93.4 0.78 2.7E-05 29.4 8.6 75 1-82 17-93 (152)
309 3hv2_A Response regulator/HD d 93.4 0.77 2.6E-05 29.5 8.6 73 1-82 16-90 (153)
310 3eod_A Protein HNR; response r 93.2 0.9 3.1E-05 28.1 9.9 66 1-74 9-76 (130)
311 3h5i_A Response regulator/sens 93.1 0.98 3.4E-05 28.5 9.2 67 1-74 7-76 (140)
312 3lte_A Response regulator; str 93.1 0.91 3.1E-05 28.1 9.5 75 1-83 8-85 (132)
313 3f6p_A Transcriptional regulat 93.0 0.79 2.7E-05 28.1 8.0 65 1-73 4-70 (120)
314 3kto_A Response regulator rece 93.0 0.54 1.9E-05 29.6 7.2 66 1-74 8-77 (136)
315 1pqw_A Polyketide synthase; ro 92.9 0.23 7.8E-06 34.0 5.7 72 1-84 65-136 (198)
316 1dz3_A Stage 0 sporulation pro 92.9 0.84 2.9E-05 28.3 8.0 71 2-79 5-78 (130)
317 3cz5_A Two-component response 92.9 1.1 3.9E-05 28.6 9.1 67 1-74 7-76 (153)
318 3s2e_A Zinc-containing alcohol 92.8 0.2 6.7E-06 37.4 5.6 71 1-84 192-262 (340)
319 2zay_A Response regulator rece 92.8 0.7 2.4E-05 29.3 7.6 65 1-73 10-76 (147)
320 3ilh_A Two component response 92.8 1.1 3.8E-05 28.1 9.2 72 1-73 11-84 (146)
321 3gl9_A Response regulator; bet 92.7 0.6 2.1E-05 28.8 7.1 65 1-73 4-70 (122)
322 3g7u_A Cytosine-specific methy 92.5 0.22 7.7E-06 38.2 5.6 78 2-87 27-121 (376)
323 4e7p_A Response regulator; DNA 92.4 1.3 4.6E-05 28.2 9.8 75 1-82 22-98 (150)
324 2qxy_A Response regulator; reg 92.4 1.3 4.3E-05 27.8 9.5 65 1-74 6-72 (142)
325 1qkk_A DCTD, C4-dicarboxylate 92.2 1.5 5E-05 28.1 9.0 66 1-74 5-72 (155)
326 2r25_B Osmosensing histidine p 92.1 1.4 4.6E-05 27.6 9.2 71 1-73 4-76 (133)
327 3cg4_A Response regulator rece 92.1 1.4 4.7E-05 27.6 10.3 74 1-82 9-85 (142)
328 2b4a_A BH3024; flavodoxin-like 92.1 1.4 4.7E-05 27.5 8.9 65 1-73 17-84 (138)
329 3a10_A Response regulator; pho 92.0 1.2 4.2E-05 26.8 9.4 65 1-73 3-69 (116)
330 1f8f_A Benzyl alcohol dehydrog 91.9 0.41 1.4E-05 36.1 6.4 72 2-85 218-289 (371)
331 4eez_A Alcohol dehydrogenase 1 91.9 0.73 2.5E-05 34.3 7.8 73 1-84 190-262 (348)
332 3t6k_A Response regulator rece 91.9 1.5 5.1E-05 27.5 8.8 64 2-73 7-72 (136)
333 3cu5_A Two component transcrip 91.8 1.6 5.4E-05 27.6 8.6 75 2-82 5-81 (141)
334 1tmy_A CHEY protein, TMY; chem 91.8 1.3 4.6E-05 26.8 9.0 66 1-73 4-71 (120)
335 2lpm_A Two-component response 91.6 0.18 6.2E-06 32.5 3.6 66 1-73 10-77 (123)
336 3crn_A Response regulator rece 91.6 1.5 5.3E-05 27.2 9.3 72 1-81 5-78 (132)
337 3fpc_A NADP-dependent alcohol 91.2 0.3 1E-05 36.6 5.0 74 1-85 193-266 (352)
338 3gt7_A Sensor protein; structu 91.2 1.9 6.6E-05 27.6 9.7 65 1-73 9-75 (154)
339 3cnb_A DNA-binding response re 91.1 1.8 6.1E-05 27.0 10.1 66 1-73 10-78 (143)
340 3heb_A Response regulator rece 91.0 2 6.8E-05 27.3 10.7 72 1-73 6-83 (152)
341 3hdg_A Uncharacterized protein 91.0 1.8 6.3E-05 26.9 8.9 73 1-82 9-83 (137)
342 2rdm_A Response regulator rece 91.0 1.8 6E-05 26.6 10.2 66 1-74 7-76 (132)
343 4a2c_A Galactitol-1-phosphate 90.9 0.83 2.8E-05 33.9 7.1 73 2-85 188-260 (346)
344 1g55_A DNA cytosine methyltran 90.9 0.32 1.1E-05 36.8 4.8 49 2-61 29-78 (343)
345 3mm4_A Histidine kinase homolo 90.9 1.8 6E-05 29.6 8.4 71 1-73 63-143 (206)
346 1k66_A Phytochrome response re 90.7 2 6.9E-05 26.9 10.6 72 1-73 8-86 (149)
347 3uko_A Alcohol dehydrogenase c 90.5 0.69 2.3E-05 35.0 6.4 73 1-85 220-295 (378)
348 2qsj_A DNA-binding response re 90.4 2.3 7.8E-05 27.0 9.7 74 1-82 5-82 (154)
349 1s8n_A Putative antiterminator 90.2 2.8 9.7E-05 28.2 8.9 75 1-83 15-91 (205)
350 3kcn_A Adenylate cyclase homol 90.2 2.4 8.2E-05 27.0 9.4 73 1-82 6-80 (151)
351 3qwb_A Probable quinone oxidor 90.2 0.41 1.4E-05 35.6 4.9 72 1-84 175-246 (334)
352 2pln_A HP1043, response regula 90.2 2.2 7.6E-05 26.5 8.4 64 1-74 20-83 (137)
353 4ej6_A Putative zinc-binding d 90.2 0.32 1.1E-05 36.9 4.3 76 1-85 209-284 (370)
354 1xhf_A DYE resistance, aerobic 90.2 2 6.9E-05 26.0 8.5 65 2-74 6-72 (123)
355 1srr_A SPO0F, sporulation resp 90.1 2.1 7E-05 26.1 8.6 72 2-82 6-79 (124)
356 3hdv_A Response regulator; PSI 90.1 2.2 7.7E-05 26.4 10.8 75 1-82 9-85 (136)
357 3jte_A Response regulator rece 89.9 2.4 8.2E-05 26.5 10.4 75 1-82 5-81 (143)
358 1zgz_A Torcad operon transcrip 89.9 2.1 7.3E-05 25.9 9.3 64 2-73 5-70 (122)
359 3jyn_A Quinone oxidoreductase; 89.7 0.53 1.8E-05 34.8 5.1 73 1-85 167-239 (325)
360 3cfy_A Putative LUXO repressor 89.7 2.1 7E-05 26.9 7.4 71 2-81 7-79 (137)
361 3c3m_A Response regulator rece 89.7 1.5 5E-05 27.5 6.7 65 1-73 5-71 (138)
362 3t8y_A CHEB, chemotaxis respon 89.7 2.6 8.8E-05 27.4 8.1 76 1-83 27-104 (164)
363 3n0r_A Response regulator; sig 89.6 1.1 3.8E-05 32.7 6.8 54 2-62 163-216 (286)
364 3r0j_A Possible two component 89.6 3 0.0001 29.2 8.9 65 1-73 25-91 (250)
365 1pl8_A Human sorbitol dehydrog 89.6 1 3.4E-05 33.8 6.6 72 1-84 198-272 (356)
366 1ys7_A Transcriptional regulat 89.5 3.7 0.00013 28.1 9.5 66 1-74 9-76 (233)
367 2c0c_A Zinc binding alcohol de 89.5 0.75 2.6E-05 34.7 5.9 71 1-84 190-260 (362)
368 4dup_A Quinone oxidoreductase; 89.4 0.67 2.3E-05 34.8 5.6 71 1-84 194-264 (353)
369 1k68_A Phytochrome response re 89.2 2.6 9E-05 25.9 10.1 73 1-74 4-80 (140)
370 3snk_A Response regulator CHEY 89.1 0.63 2.2E-05 29.2 4.6 65 1-73 16-83 (135)
371 1dbw_A Transcriptional regulat 89.1 2.6 8.8E-05 25.8 10.3 65 1-73 5-71 (126)
372 1kgs_A DRRD, DNA binding respo 89.0 4 0.00014 27.8 9.5 66 1-74 4-71 (225)
373 2qzj_A Two-component response 88.9 2.9 0.0001 26.1 8.9 74 1-83 6-81 (136)
374 1wly_A CAAR, 2-haloacrylate re 88.8 0.69 2.4E-05 34.3 5.2 72 1-84 172-243 (333)
375 3jv7_A ADH-A; dehydrogenase, n 88.8 1.1 3.7E-05 33.4 6.3 73 1-85 198-270 (345)
376 3b2n_A Uncharacterized protein 88.8 2.9 9.9E-05 25.9 8.7 74 2-82 6-81 (133)
377 1yio_A Response regulatory pro 88.8 3.9 0.00013 27.4 9.3 65 2-74 7-73 (208)
378 2c7p_A Modification methylase 88.8 0.77 2.6E-05 34.5 5.4 70 2-87 36-122 (327)
379 2qvg_A Two component response 88.7 3 0.0001 26.0 10.8 72 1-73 9-83 (143)
380 2j48_A Two-component sensor ki 88.7 2.5 8.4E-05 25.0 8.3 66 1-74 3-70 (119)
381 3kyj_B CHEY6 protein, putative 88.6 1.2 4.1E-05 28.2 5.7 67 1-73 15-84 (145)
382 3m6m_D Sensory/regulatory prot 88.6 1.2 4E-05 28.3 5.7 63 2-72 17-81 (143)
383 2qv0_A Protein MRKE; structura 88.6 3.1 0.00011 26.0 9.5 71 1-79 11-84 (143)
384 1v3u_A Leukotriene B4 12- hydr 88.5 0.99 3.4E-05 33.4 5.9 71 1-84 172-243 (333)
385 2hcy_A Alcohol dehydrogenase 1 88.4 1.2 4E-05 33.3 6.3 72 1-84 196-268 (347)
386 3gms_A Putative NADPH:quinone 88.4 0.89 3E-05 33.8 5.6 73 1-85 171-243 (340)
387 1mvo_A PHOP response regulator 88.3 3.1 0.00011 25.7 8.9 66 1-74 5-72 (136)
388 4dvj_A Putative zinc-dependent 88.3 1.3 4.4E-05 33.4 6.5 71 1-84 199-269 (363)
389 1qor_A Quinone oxidoreductase; 88.2 0.71 2.4E-05 34.1 4.9 72 1-84 167-238 (327)
390 4dad_A Putative pilus assembly 88.1 2.5 8.7E-05 26.6 7.0 74 1-82 22-99 (146)
391 4eye_A Probable oxidoreductase 88.0 1.1 3.9E-05 33.3 6.0 72 1-85 186-257 (342)
392 3fbg_A Putative arginate lyase 87.9 1.4 4.6E-05 32.9 6.3 70 1-83 177-246 (346)
393 2d8a_A PH0655, probable L-thre 87.9 1.1 3.9E-05 33.4 5.9 73 1-84 194-266 (348)
394 1cdo_A Alcohol dehydrogenase; 87.9 1.4 4.6E-05 33.3 6.4 71 2-84 220-293 (374)
395 2pl1_A Transcriptional regulat 87.8 3.1 0.0001 25.0 9.6 75 1-83 2-78 (121)
396 3q9s_A DNA-binding response re 87.7 2.8 9.5E-05 29.6 7.6 64 2-73 40-105 (249)
397 2a9o_A Response regulator; ess 87.7 3.1 0.00011 24.9 8.6 65 1-73 3-69 (120)
398 1vj0_A Alcohol dehydrogenase, 87.6 0.7 2.4E-05 35.1 4.6 70 1-84 222-297 (380)
399 1mb3_A Cell division response 87.6 1.7 5.7E-05 26.4 5.8 65 1-73 3-69 (124)
400 3trk_A Nonstructural polyprote 87.6 0.52 1.8E-05 34.9 3.6 37 50-86 210-260 (324)
401 4b7c_A Probable oxidoreductase 87.6 1.3 4.3E-05 32.9 6.0 73 1-85 176-248 (336)
402 1e3i_A Alcohol dehydrogenase, 87.6 1.4 4.8E-05 33.2 6.3 71 2-84 223-296 (376)
403 3fwz_A Inner membrane protein 87.5 4 0.00014 26.1 7.8 71 1-84 32-104 (140)
404 2dph_A Formaldehyde dismutase; 87.4 0.73 2.5E-05 35.2 4.7 75 1-84 212-298 (398)
405 3ip1_A Alcohol dehydrogenase, 87.2 1.2 4.2E-05 34.0 5.9 74 1-84 240-317 (404)
406 1p0f_A NADP-dependent alcohol 87.1 1.4 4.9E-05 33.1 6.1 71 2-84 219-292 (373)
407 1p6q_A CHEY2; chemotaxis, sign 87.1 3.6 0.00012 25.1 8.7 66 1-73 8-75 (129)
408 2ayx_A Sensor kinase protein R 86.7 4.8 0.00016 28.4 8.4 64 2-73 132-197 (254)
409 3c3w_A Two component transcrip 86.6 3.5 0.00012 28.4 7.6 76 1-83 3-80 (225)
410 3m6i_A L-arabinitol 4-dehydrog 86.6 5.1 0.00017 29.9 8.9 71 2-84 207-282 (363)
411 3pi7_A NADH oxidoreductase; gr 86.6 1.2 4E-05 33.3 5.3 73 1-85 191-263 (349)
412 1rjw_A ADH-HT, alcohol dehydro 86.5 0.93 3.2E-05 33.7 4.7 71 1-84 190-260 (339)
413 2oqr_A Sensory transduction pr 86.1 6.2 0.00021 26.9 8.6 65 1-73 6-72 (230)
414 2fzw_A Alcohol dehydrogenase c 86.1 1.6 5.6E-05 32.8 5.9 71 2-84 218-291 (373)
415 2jhf_A Alcohol dehydrogenase E 86.0 1.7 5.8E-05 32.7 6.0 71 2-84 219-292 (374)
416 3c97_A Signal transduction his 85.8 2.4 8E-05 26.6 5.9 64 2-73 13-78 (140)
417 1kol_A Formaldehyde dehydrogen 85.7 1.8 6.1E-05 32.9 6.0 75 2-85 213-300 (398)
418 1jvb_A NAD(H)-dependent alcoho 85.5 1.3 4.3E-05 33.1 5.0 72 1-84 198-270 (347)
419 3nhm_A Response regulator; pro 85.5 4.6 0.00016 24.7 8.5 65 1-74 6-72 (133)
420 3h1g_A Chemotaxis protein CHEY 85.3 4.7 0.00016 24.7 11.1 67 1-73 7-75 (129)
421 1i3c_A Response regulator RCP1 84.8 5.1 0.00017 25.3 7.2 71 2-73 11-85 (149)
422 2zb4_A Prostaglandin reductase 84.7 1.3 4.5E-05 33.1 4.8 73 1-85 188-260 (357)
423 1e3j_A NADP(H)-dependent ketos 84.4 3.2 0.00011 30.9 6.8 75 2-84 195-270 (352)
424 2h6e_A ADH-4, D-arabinose 1-de 84.3 4.8 0.00016 29.8 7.7 70 1-84 198-268 (344)
425 3uog_A Alcohol dehydrogenase; 84.3 1 3.5E-05 33.9 4.0 72 1-85 215-287 (363)
426 3n53_A Response regulator rece 84.1 5.1 0.00017 24.8 6.9 64 1-73 5-70 (140)
427 1a04_A Nitrate/nitrite respons 84.0 7.3 0.00025 26.3 8.1 74 1-81 7-82 (215)
428 2lse_A Four helix bundle prote 84.4 0.21 7.1E-06 29.6 0.0 71 9-85 21-91 (101)
429 2j3h_A NADP-dependent oxidored 83.4 1.8 6E-05 32.2 5.0 72 1-84 182-254 (345)
430 2eih_A Alcohol dehydrogenase; 83.1 1.2 4.2E-05 33.1 4.0 72 1-84 193-264 (343)
431 3r24_A NSP16, 2'-O-methyl tran 83.1 0.74 2.5E-05 34.7 2.7 52 29-90 155-220 (344)
432 2b5w_A Glucose dehydrogenase; 82.9 1.6 5.6E-05 32.6 4.6 68 2-84 202-272 (357)
433 2jba_A Phosphate regulon trans 82.9 5.8 0.0002 23.9 8.2 65 1-73 4-70 (127)
434 2gwr_A DNA-binding response re 82.9 9.1 0.00031 26.3 8.4 64 2-73 8-73 (238)
435 2j8z_A Quinone oxidoreductase; 82.7 2.5 8.7E-05 31.6 5.6 72 1-84 189-260 (354)
436 3rht_A (gatase1)-like protein; 82.6 7.1 0.00024 28.3 7.8 74 1-83 6-84 (259)
437 1jbe_A Chemotaxis protein CHEY 82.3 6.3 0.00021 23.9 10.6 66 1-73 6-73 (128)
438 3gaz_A Alcohol dehydrogenase s 82.2 3 0.0001 31.0 5.9 67 2-83 178-244 (343)
439 2hwk_A Helicase NSP2; rossman 82.1 1.3 4.5E-05 33.0 3.6 35 50-84 205-253 (320)
440 1yb5_A Quinone oxidoreductase; 81.8 2.9 9.9E-05 31.3 5.7 72 1-84 197-268 (351)
441 4auk_A Ribosomal RNA large sub 80.7 1.1 3.7E-05 34.6 2.9 61 1-77 235-295 (375)
442 3eqz_A Response regulator; str 80.7 7.4 0.00025 23.7 7.1 72 1-82 5-78 (135)
443 4gua_A Non-structural polyprot 80.3 1.9 6.7E-05 35.1 4.3 38 49-86 219-270 (670)
444 3eq2_A Probable two-component 79.7 10 0.00035 28.4 8.2 66 1-74 7-74 (394)
445 2hqr_A Putative transcriptiona 79.6 12 0.0004 25.3 9.0 64 1-74 2-65 (223)
446 1zh2_A KDP operon transcriptio 79.2 7.8 0.00027 23.0 8.2 63 2-72 4-68 (121)
447 3dzd_A Transcriptional regulat 79.1 11 0.00036 28.5 8.0 73 1-82 2-76 (368)
448 1ny5_A Transcriptional regulat 78.5 17 0.00059 27.5 9.1 72 1-81 2-75 (387)
449 2qrv_A DNA (cytosine-5)-methyl 78.4 9.1 0.00031 28.2 7.3 75 2-87 43-142 (295)
450 2jk1_A HUPR, hydrogenase trans 78.2 9.6 0.00033 23.5 9.1 64 2-74 4-69 (139)
451 2px2_A Genome polyprotein [con 77.5 3.3 0.00011 30.4 4.5 48 28-84 124-182 (269)
452 1xa0_A Putative NADPH dependen 77.3 3.4 0.00012 30.3 4.7 70 1-84 176-245 (328)
453 1dc7_A NTRC, nitrogen regulati 77.0 2.7 9.1E-05 25.3 3.5 54 1-62 5-58 (124)
454 3nx4_A Putative oxidoreductase 76.3 1.4 4.9E-05 32.3 2.4 68 1-84 173-240 (324)
455 2dq4_A L-threonine 3-dehydroge 76.3 2.3 7.9E-05 31.6 3.6 70 1-84 191-261 (343)
456 4h0n_A DNMT2; SAH binding, tra 76.0 4.9 0.00017 30.2 5.3 73 2-87 30-121 (333)
457 1qo0_D AMIR; binding protein, 75.8 11 0.00036 25.0 6.6 53 2-66 15-67 (196)
458 3evf_A RNA-directed RNA polyme 75.7 3.1 0.0001 30.7 3.9 36 49-84 138-183 (277)
459 1uuf_A YAHK, zinc-type alcohol 75.5 15 0.0005 27.6 7.9 67 2-84 221-287 (369)
460 1dcf_A ETR1 protein; beta-alph 75.3 12 0.0004 23.0 6.9 63 1-72 9-73 (136)
461 3l9w_A Glutathione-regulated p 75.0 11 0.00039 29.0 7.3 70 1-83 29-100 (413)
462 3gqv_A Enoyl reductase; medium 74.3 10 0.00034 28.5 6.7 70 2-84 192-262 (371)
463 2k4m_A TR8_protein, UPF0146 pr 74.0 1.4 4.9E-05 29.5 1.7 58 2-84 62-120 (153)
464 3klo_A Transcriptional regulat 73.6 8.1 0.00028 26.4 5.7 76 1-82 9-87 (225)
465 3luf_A Two-component system re 71.3 24 0.00082 24.8 7.9 65 2-73 127-193 (259)
466 1iz0_A Quinone oxidoreductase; 71.1 14 0.00047 26.7 6.7 65 1-84 152-217 (302)
467 3c85_A Putative glutathione-re 71.1 19 0.00066 23.7 7.3 72 1-84 65-138 (183)
468 3eld_A Methyltransferase; flav 71.1 4.9 0.00017 29.9 4.1 36 49-84 145-190 (300)
469 3k96_A Glycerol-3-phosphate de 70.6 15 0.00051 27.7 6.9 72 1-83 54-131 (356)
470 3ggo_A Prephenate dehydrogenas 70.6 7.3 0.00025 28.8 5.1 64 2-82 61-125 (314)
471 3krt_A Crotonyl COA reductase; 70.4 7.3 0.00025 30.2 5.2 71 2-84 256-343 (456)
472 3gt0_A Pyrroline-5-carboxylate 69.6 13 0.00045 26.0 6.1 64 2-83 32-95 (247)
473 4a0s_A Octenoyl-COA reductase/ 69.5 11 0.00037 29.0 6.0 32 49-84 304-335 (447)
474 1p2f_A Response regulator; DRR 68.7 24 0.0008 23.7 7.7 70 1-82 4-75 (220)
475 3gg2_A Sugar dehydrogenase, UD 68.6 24 0.0008 27.5 7.8 74 1-85 27-122 (450)
476 1a2o_A CHEB methylesterase; ba 68.1 32 0.0011 25.7 8.3 75 1-83 5-82 (349)
477 2y0c_A BCEC, UDP-glucose dehyd 68.1 30 0.001 27.1 8.4 73 1-84 33-127 (478)
478 1gu7_A Enoyl-[acyl-carrier-pro 67.8 20 0.00069 26.5 7.1 32 49-84 243-274 (364)
479 4dcm_A Ribosomal RNA large sub 67.8 23 0.00078 26.8 7.4 71 3-84 62-135 (375)
480 1i4w_A Mitochondrial replicati 67.1 3.4 0.00012 31.5 2.6 34 1-38 84-117 (353)
481 3gcz_A Polyprotein; flavivirus 65.8 3.7 0.00013 30.3 2.5 36 49-84 154-200 (282)
482 3sy8_A ROCR; TIM barrel phosph 65.4 31 0.0011 26.0 7.8 76 1-83 5-82 (400)
483 1piw_A Hypothetical zinc-type 64.5 4.6 0.00016 30.2 2.9 70 1-84 205-275 (360)
484 2cdc_A Glucose dehydrogenase g 63.6 6.3 0.00022 29.5 3.6 68 1-84 206-277 (366)
485 2km1_A Protein DRE2; yeast, an 63.4 5.9 0.0002 26.0 2.9 69 8-83 21-96 (136)
486 3hgm_A Universal stress protei 62.9 22 0.00075 22.1 5.7 45 12-60 72-119 (147)
487 3two_A Mannitol dehydrogenase; 62.8 11 0.00038 27.9 4.7 63 1-84 202-264 (348)
488 4a7p_A UDP-glucose dehydrogena 62.2 54 0.0018 25.5 8.7 74 1-85 33-129 (446)
489 1bg6_A N-(1-D-carboxylethyl)-L 61.4 14 0.00049 27.1 5.2 73 2-84 30-108 (359)
490 3ubt_Y Modification methylase 61.2 16 0.00054 26.7 5.4 71 2-87 25-112 (331)
491 2g5c_A Prephenate dehydrogenas 61.2 18 0.00062 25.7 5.6 64 2-82 29-93 (281)
492 2aef_A Calcium-gated potassium 60.8 37 0.0013 23.3 7.2 69 2-84 34-104 (234)
493 4e21_A 6-phosphogluconate dehy 59.3 26 0.0009 26.4 6.3 66 2-83 48-113 (358)
494 3qv2_A 5-cytosine DNA methyltr 59.2 11 0.00037 28.2 4.1 50 3-64 39-89 (327)
495 3idf_A USP-like protein; unive 59.0 28 0.00097 21.3 6.1 42 13-60 69-110 (138)
496 1lnq_A MTHK channels, potassiu 58.8 50 0.0017 24.1 8.3 68 2-83 140-209 (336)
497 3s3t_A Nucleotide-binding prot 58.4 28 0.00094 21.6 5.6 42 15-60 74-117 (146)
498 3tri_A Pyrroline-5-carboxylate 57.7 29 0.00099 24.9 6.1 64 2-83 32-96 (280)
499 1yf3_A DNA adenine methylase; 56.8 27 0.00093 25.0 5.8 52 26-86 148-212 (259)
500 2g1p_A DNA adenine methylase; 56.5 7.3 0.00025 28.4 2.7 29 26-61 156-184 (278)
No 1
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.95 E-value=7.5e-28 Score=174.86 Aligned_cols=130 Identities=22% Similarity=0.377 Sum_probs=116.9
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCC-CcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCe
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVD-HKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGG 79 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~-~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG 79 (142)
+|+++|+++++++.|+++++..|+. ++++++.+|+.++++.+. +++||+||+|+++..|..+++.+.++|+|||
T Consensus 83 ~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~-----~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG 157 (221)
T 3dr5_A 83 TLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLA-----NDSYQLVFGQVSPMDLKALVDAAWPLLRRGG 157 (221)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSC-----TTCEEEEEECCCTTTHHHHHHHHHHHEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhc-----CCCcCeEEEcCcHHHHHHHHHHHHHHcCCCc
Confidence 4899999999999999999999998 799999999999876542 4689999999999999999999999999999
Q ss_pred EEEEecccccccccCCCCCCCCCCCcchHHHHHHHHHHhhcCCCeeEEeeecCceeEEEEEe
Q 032390 80 IAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNRSLADDPRVQLSHVALGDGITICRRI 141 (142)
Q Consensus 80 ~iv~dn~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~gdG~~i~~~~ 141 (142)
+++++|++|+|.+..+... +....++++|++.+.++++++++++|+|||++++++-
T Consensus 158 ~lv~dn~~~~g~v~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~lp~gdGl~~~~~~ 213 (221)
T 3dr5_A 158 ALVLADALLDGTIADQTRK------DRDTQAARDADEYIRSIEGAHVARLPLGAGLTVVTKA 213 (221)
T ss_dssp EEEETTTTGGGTCSCSSCC------CHHHHHHHHHHHHHTTCTTEEEEEESSTTCEEEEEEC
T ss_pred EEEEeCCCCCCcCCCCCCC------ChHHHHHHHHHHHHhhCCCeeEEEeeccchHHHHHHH
Confidence 9999999999998876421 1156689999999999999999999999999999874
No 2
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.94 E-value=1.6e-26 Score=169.23 Aligned_cols=141 Identities=65% Similarity=1.146 Sum_probs=120.2
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|+++|+++++++.|++++++.|+.++++++.+|+.+.++.+.+.....++||+||+|+++..|..+++.+.++|+|||+
T Consensus 97 ~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pGG~ 176 (237)
T 3c3y_A 97 KITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYDFGFVDADKPNYIKYHERLMKLVKVGGI 176 (237)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcCEEEECCchHHHHHHHHHHHHhcCCCeE
Confidence 48999999999999999999999988999999999998876632100136899999999999999999999999999999
Q ss_pred EEEecccccccccCCCCCCCCCCCcchHHHHHHHHHHhhcCCCeeEEeeecCceeEEEEEeC
Q 032390 81 AVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNRSLADDPRVQLSHVALGDGITICRRIF 142 (142)
Q Consensus 81 iv~dn~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~gdG~~i~~~~~ 142 (142)
++++|++|+|.+..|....+...++ ..+.+++|++.+.+++++.++++|++||+++++|+.
T Consensus 177 lv~d~~~~~g~~~~~~~~~~~~~r~-~~~~i~~~~~~l~~~~~~~~~~lp~~dG~~~~~~~~ 237 (237)
T 3c3y_A 177 VAYDNTLWGGTVAQPESEVPDFMKE-NREAVIELNKLLAADPRIEIVHLPLGDGITFCRRLY 237 (237)
T ss_dssp EEEECTTGGGGGGSCGGGSCGGGHH-HHHHHHHHHHHHHHCTTEEEEEECSTTCEEEEEECC
T ss_pred EEEecCCcCCccCCCcccchhhHHH-HHHHHHHHHHHHhcCCCeEEEEEEeCCceEEEEEcC
Confidence 9999999999988764322222222 567899999999999999999999999999999873
No 3
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.94 E-value=1.3e-26 Score=170.36 Aligned_cols=134 Identities=34% Similarity=0.551 Sum_probs=118.3
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|+++|+++++++.|+++++..|+.++++++.+|+.+.++.+.+. +..++||+||+|+++..+..+++.+.++|+|||+
T Consensus 87 ~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~-~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~ 165 (242)
T 3r3h_A 87 QVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNE-GGEHQFDFIFIDADKTNYLNYYELALKLVTPKGL 165 (242)
T ss_dssp EEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHH-HCSSCEEEEEEESCGGGHHHHHHHHHHHEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhc-cCCCCEeEEEEcCChHHhHHHHHHHHHhcCCCeE
Confidence 489999999999999999999999889999999999988765210 0136899999999999999999999999999999
Q ss_pred EEEecccccccccCCCCCCCCCCCcchHHHHHHHHHHhhcCCCeeEEeeecCceeEEEEEe
Q 032390 81 AVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNRSLADDPRVQLSHVALGDGITICRRI 141 (142)
Q Consensus 81 iv~dn~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~gdG~~i~~~~ 141 (142)
++++|++|+|.+..+.... +..+++++|++.+.++++|+++++|+|||+++++||
T Consensus 166 lv~d~~~~~g~v~~~~~~~------~~~~~~~~~~~~l~~~~~~~~~~lp~~dG~~~~~k~ 220 (242)
T 3r3h_A 166 IAIDNIFWDGKVIDPNDTS------GQTREIKKLNQVIKNDSRVFVSLLAIADGMFLVQPI 220 (242)
T ss_dssp EEEECSSSSSCSSCTTCCC------HHHHHHHHHHHHHHTCCSEEEEEESSSSCEEEEEEC
T ss_pred EEEECCccCCcccCccccC------hHHHHHHHHHHHHhhCCCEEEEEEEccCceEEEEEc
Confidence 9999999999987765321 166789999999999999999999999999999986
No 4
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.93 E-value=1.1e-25 Score=165.93 Aligned_cols=141 Identities=57% Similarity=1.006 Sum_probs=119.4
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|+++|+++++++.|+++++..|+.++++++.+|+.+.++.+.+.....++||+||+|+++..|..+++.+.++|+|||+
T Consensus 106 ~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~ 185 (247)
T 1sui_A 106 KILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGV 185 (247)
T ss_dssp EEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCC
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEEEEEEcCchHHHHHHHHHHHHhCCCCeE
Confidence 48999999999999999999999988999999999998876521000036899999999999999999999999999999
Q ss_pred EEEecccccccccCCCCCCCCCC-CcchHHHHHHHHHHhhcCCCeeEEeeecCceeEEEEEeC
Q 032390 81 AVYDNTLWGGTVAVPEEQVPDHF-RGSSRQAILDLNRSLADDPRVQLSHVALGDGITICRRIF 142 (142)
Q Consensus 81 iv~dn~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~lp~gdG~~i~~~~~ 142 (142)
++++|++|+|.+..+....+... ++ ..+.+++|++.+.+++++.++++|++||+++++|+.
T Consensus 186 lv~d~~~~~g~v~~~~~~~~~~~~~~-~~~~i~~~~~~l~~~~~~~~~~lp~~dG~~l~~k~~ 247 (247)
T 1sui_A 186 IGYDNTLWNGSVVAPPDAPLRKYVRY-YRDFVLELNKALAVDPRIEICMLPVGDGITICRRIK 247 (247)
T ss_dssp EEEECTTGGGGGGCCTTSCCCHHHHH-HHHHHHHHHHHHHTCTTBCCEEECSTTCEEEECBCC
T ss_pred EEEecCCcCCcccCCCccchhhhhhH-HHHHHHHHHHHHhhCCCeEEEEEecCCccEEEEEcC
Confidence 99999999999887753322111 12 466899999999999999999999999999999863
No 5
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.93 E-value=1.4e-25 Score=163.41 Aligned_cols=134 Identities=22% Similarity=0.329 Sum_probs=117.3
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHH-HHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCe
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLD-QLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGG 79 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~-~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG 79 (142)
+|+++|+++++++.|+++++..++.++++++.+|+.+.++ .+ .++||+||+|++...+..+++.+.++|+|||
T Consensus 97 ~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~------~~~fD~V~~~~~~~~~~~~l~~~~~~LkpgG 170 (232)
T 3ntv_A 97 HVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVN------DKVYDMIFIDAAKAQSKKFFEIYTPLLKHQG 170 (232)
T ss_dssp EEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHT------TSCEEEEEEETTSSSHHHHHHHHGGGEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhc------cCCccEEEEcCcHHHHHHHHHHHHHhcCCCe
Confidence 4899999999999999999999998899999999998876 54 5689999999999999999999999999999
Q ss_pred EEEEecccccccccCCCCCCCCCCCcchHHHHHHHHHHhhcCCCeeEEeeecCceeEEEEEe
Q 032390 80 IAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNRSLADDPRVQLSHVALGDGITICRRI 141 (142)
Q Consensus 80 ~iv~dn~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~gdG~~i~~~~ 141 (142)
+++++|++|.|.+..+....+++... ..+.+++|++.+.+++++.++++|+|||+++++||
T Consensus 171 ~lv~d~~~~~g~v~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~lp~~dG~~i~~k~ 231 (232)
T 3ntv_A 171 LVITDNVLYHGFVSDIGIVRSRNVRQ-MVKKVQDYNEWLIKQPGYTTNFLNIDDGLAISIKG 231 (232)
T ss_dssp EEEEECTTGGGGGGCGGGGGCHHHHH-HHHHHHHHHHHHHTCTTEEEEEECSTTCEEEEEEC
T ss_pred EEEEeeCCcCccccCcccccchhhhH-HHHHHHHHHHHHhcCCCeEEEEEEcCCceEEEEEC
Confidence 99999999999887764311111111 45689999999999999999999999999999986
No 6
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.93 E-value=1.4e-24 Score=158.17 Aligned_cols=132 Identities=39% Similarity=0.599 Sum_probs=117.6
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCC--CceeEEEEcCCCcCcHHHHHHHHhcccCC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE--GSFDYAFVDADKDNYCNYHERLMKLLKVG 78 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~--~~fD~IfiD~~~~~~~~~~~~~~~~L~~g 78 (142)
+|+++|+++++++.|+++++..|+.++++++.+|+.+.++.+.. .+ ++||+||+|+++..|..+++.+.++|+||
T Consensus 99 ~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~---~~~~~~fD~V~~d~~~~~~~~~l~~~~~~Lkpg 175 (232)
T 3cbg_A 99 QIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQ---GKPLPEFDLIFIDADKRNYPRYYEIGLNLLRRG 175 (232)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHT---SSSCCCEEEEEECSCGGGHHHHHHHHHHTEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHh---cCCCCCcCEEEECCCHHHHHHHHHHHHHHcCCC
Confidence 48999999999999999999999988899999999998877631 12 68999999999889999999999999999
Q ss_pred eEEEEecccccccccCCCCCCCCCCCcchHHHHHHHHHHhhcCCCeeEEeeecCceeEEEEEe
Q 032390 79 GIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNRSLADDPRVQLSHVALGDGITICRRI 141 (142)
Q Consensus 79 G~iv~dn~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~gdG~~i~~~~ 141 (142)
|+++++|++|.|.+..+... .+..+.+++|++.+.+++++.++++|++||+++++|+
T Consensus 176 G~lv~~~~~~~g~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~lp~~dG~~~~~~~ 232 (232)
T 3cbg_A 176 GLMVIDNVLWHGKVTEVDPQ------EAQTQVLQQFNRDLAQDERVRISVIPLGDGMTLALKK 232 (232)
T ss_dssp EEEEEECTTGGGGGGCSSCC------SHHHHHHHHHHHHHTTCTTEEEEEECSBTCEEEEEEC
T ss_pred eEEEEeCCCcCCccCCcccC------ChHHHHHHHHHHHHhhCCCeEEEEEEcCCeEEEEEeC
Confidence 99999999999998776421 1267889999999999999999999999999999985
No 7
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.92 E-value=2.2e-24 Score=155.58 Aligned_cols=134 Identities=32% Similarity=0.469 Sum_probs=117.5
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|+++|+++++++.|+++++..|+.++++++++|+.+.++.+... ...++||+||+|++...+..+++.+.++|+|||+
T Consensus 91 ~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~-~~~~~fD~v~~~~~~~~~~~~l~~~~~~L~pgG~ 169 (225)
T 3tr6_A 91 TLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHA-GQAWQYDLIYIDADKANTDLYYEESLKLLREGGL 169 (225)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTT-TCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEE
T ss_pred EEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhc-cCCCCccEEEECCCHHHHHHHHHHHHHhcCCCcE
Confidence 489999999999999999999999888999999999988766310 0016899999999988899999999999999999
Q ss_pred EEEecccccccccCCCCCCCCCCCcchHHHHHHHHHHhhcCCCeeEEeeecCceeEEEEEe
Q 032390 81 AVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNRSLADDPRVQLSHVALGDGITICRRI 141 (142)
Q Consensus 81 iv~dn~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~gdG~~i~~~~ 141 (142)
++++|++|.|.+..+.... +..+.+++|++.+.++++++++++|+|||+++++|+
T Consensus 170 lv~~~~~~~g~~~~~~~~~------~~~~~~~~~~~~l~~~~~~~~~~lp~~dG~~~~~k~ 224 (225)
T 3tr6_A 170 IAVDNVLRRGQVADEENQS------ENNQLIRLFNQKVYKDERVDMILIPIGDGLTLARKK 224 (225)
T ss_dssp EEEECSSGGGGGGCTTCCC------HHHHHHHHHHHHHHHCTTEEEEEECSTTCEEEEEEC
T ss_pred EEEeCCCcCCcccCccccC------hHHHHHHHHHHHHhcCCCeEEEEEEcCCccEEEEEC
Confidence 9999999999887765321 156789999999999999999999999999999986
No 8
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.92 E-value=3.9e-24 Score=154.58 Aligned_cols=134 Identities=37% Similarity=0.615 Sum_probs=117.2
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|+++|+++++++.|+++++..|+.++++++.+|+.+.++.+... +..++||+||+|+++..|..+++.+.++|+|||+
T Consensus 96 ~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~-~~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG~ 174 (229)
T 2avd_A 96 RVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAA-GEAGTFDVAVVDADKENCSAYYERCLQLLRPGGI 174 (229)
T ss_dssp EEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHT-TCTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhc-CCCCCccEEEECCCHHHHHHHHHHHHHHcCCCeE
Confidence 489999999999999999999999889999999999887766320 0016899999999988999999999999999999
Q ss_pred EEEecccccccccCCCCCCCCCCCcchHHHHHHHHHHhhcCCCeeEEeeecCceeEEEEEe
Q 032390 81 AVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNRSLADDPRVQLSHVALGDGITICRRI 141 (142)
Q Consensus 81 iv~dn~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~gdG~~i~~~~ 141 (142)
++++|++|+|.+..+... .+..+.+++|++.+.+++++.++++|++||+++++|+
T Consensus 175 lv~~~~~~~g~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~lp~~dGl~~~~k~ 229 (229)
T 2avd_A 175 LAVLRVLWRGKVLQPPKG------DVAAECVRNLNERIRRDVRVYISLLPLGDGLTLAFKI 229 (229)
T ss_dssp EEEECCSGGGGGGSCCTT------CHHHHHHHHHHHHHHHCTTEEEEEECSTTCEEEEEEC
T ss_pred EEEECCCcCCcccCcccC------ChHHHHHHHHHHHHhhCCCEEEEEEecCCceEEEEEC
Confidence 999999999988766421 1267889999999999999999999999999999985
No 9
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.91 E-value=1.3e-23 Score=154.61 Aligned_cols=131 Identities=24% Similarity=0.420 Sum_probs=116.1
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|+++|+++++++.|+++++..|+.++++++.+|+.+.++.+. ..++||+||+|++...+..+++.+.++|+|||+
T Consensus 90 ~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~----~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~ 165 (248)
T 3tfw_A 90 QLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLG----ECPAFDLIFIDADKPNNPHYLRWALRYSRPGTL 165 (248)
T ss_dssp EEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCC----SCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcC----CCCCeEEEEECCchHHHHHHHHHHHHhcCCCeE
Confidence 4899999999999999999999998899999999999877651 134899999999999999999999999999999
Q ss_pred EEEecccccccccCCCCCCCCCCCcchHHHHHHHHHHhhcCCCeeEEee-ecC----ceeEEEEEe
Q 032390 81 AVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNRSLADDPRVQLSHV-ALG----DGITICRRI 141 (142)
Q Consensus 81 iv~dn~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l-p~g----dG~~i~~~~ 141 (142)
++++|++|.|.+..+... .+..+.+++|++.+..+++|+++++ |+| ||++++++|
T Consensus 166 lv~~~~~~~g~v~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~l~~~g~~~~DG~~i~~~~ 225 (248)
T 3tfw_A 166 IIGDNVVRDGEVVNPQSA------DERVQGVRQFIEMMGAEPRLTATALQTVGTKGWDGFTLAWVN 225 (248)
T ss_dssp EEEECCSGGGGGGCTTCC------CHHHHHHHHHHHHHHHCTTEEEEEEEECSTTCSEEEEEEEEC
T ss_pred EEEeCCCcCCcccCcccc------chHHHHHHHHHHHHhhCCCEEEEEeecCCCCCCCeeEEEEEe
Confidence 999999999998776432 1267889999999999999999988 676 999999986
No 10
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.91 E-value=2e-23 Score=150.39 Aligned_cols=133 Identities=24% Similarity=0.359 Sum_probs=117.4
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|+++|+++++++.|+++++..|+.++++++.+|+.+.++.+... ..++||+||+|++...+..+++.+.++|+|||+
T Consensus 85 ~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~--~~~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG~ 162 (223)
T 3duw_A 85 RVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENE--KYEPFDFIFIDADKQNNPAYFEWALKLSRPGTV 162 (223)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHT--TCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhc--CCCCcCEEEEcCCcHHHHHHHHHHHHhcCCCcE
Confidence 489999999999999999999999888999999999987766421 115799999999998899999999999999999
Q ss_pred EEEecccccccccCCCCCCCCCCCcchHHHHHHHHHHhhcCCCeeEEeeec-----CceeEEEEEe
Q 032390 81 AVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNRSLADDPRVQLSHVAL-----GDGITICRRI 141 (142)
Q Consensus 81 iv~dn~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~-----gdG~~i~~~~ 141 (142)
++++|++|.|.+..+.... +....+++|++.+..++++.++++|+ +||+.++++|
T Consensus 163 lv~~~~~~~g~~~~~~~~~------~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~~~dG~~~~~~~ 222 (223)
T 3duw_A 163 IIGDNVVREGEVIDNTSND------PRVQGIRRFYELIAAEPRVSATALQTVGSKGYDGFIMAVVK 222 (223)
T ss_dssp EEEESCSGGGGGGCTTCCC------HHHHHHHHHHHHHHHCTTEEEEEEEEEETTEEEEEEEEEEC
T ss_pred EEEeCCCcCCcccCccccc------hHHHHHHHHHHHHhhCCCeEEEEEeccCCCCCCeeEEEEEe
Confidence 9999999999887765321 16678999999999999999999999 9999999876
No 11
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.89 E-value=1.1e-22 Score=145.51 Aligned_cols=127 Identities=20% Similarity=0.328 Sum_probs=106.8
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|+++|+++++++.|+++++..++.++++++.+|+.+.++.+ .+ ||+||+|++...+..+++.+.++|+|||+
T Consensus 83 ~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~------~~-fD~v~~~~~~~~~~~~l~~~~~~LkpgG~ 155 (210)
T 3c3p_A 83 RVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQ------RD-IDILFMDCDVFNGADVLERMNRCLAKNAL 155 (210)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTC------CS-EEEEEEETTTSCHHHHHHHHGGGEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccC------CC-CCEEEEcCChhhhHHHHHHHHHhcCCCeE
Confidence 489999999999999999999998888999999999876643 45 99999999888899999999999999999
Q ss_pred EEEecccccccccCCCCCCCCCCCcchHHHHHHHHHHhhcCCCeeEEeeecCceeEEEEEe
Q 032390 81 AVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNRSLADDPRVQLSHVALGDGITICRRI 141 (142)
Q Consensus 81 iv~dn~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~gdG~~i~~~~ 141 (142)
++++|++|.|.+..+ ... +..+.+++|++.+..++++.++++|+++|+.+++|+
T Consensus 156 lv~~~~~~~g~~~~~-~~~------~~~~~~~~~~~~l~~~~~~~~~~~p~~~G~~~~~~~ 209 (210)
T 3c3p_A 156 LIAVNALRRGSVAES-HED------PETAALREFNHHLSRRRDFFTTIVPVGNGVLLGYRL 209 (210)
T ss_dssp EEEESSSSCC-------------------CCCHHHHHHTTCTTEEEEEECSTTCEEEEEEC
T ss_pred EEEECccccCcccCc-ccc------hHHHHHHHHHHHHhhCCCeEEEEEecCCceEEEEeC
Confidence 999999999886643 111 145578999999999999999999999999999986
No 12
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.89 E-value=9.3e-22 Score=143.46 Aligned_cols=136 Identities=35% Similarity=0.510 Sum_probs=116.3
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhc--------ccC-C-CceeEEEEcCCCcCcHHHHHH
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKY--------SEN-E-GSFDYAFVDADKDNYCNYHER 70 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~--------~~~-~-~~fD~IfiD~~~~~~~~~~~~ 70 (142)
+|+++|+++++++.|+++++..|+.++++++.+|+.+.++.+... .-+ + ++||+||+|+....+..+++.
T Consensus 87 ~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~ 166 (239)
T 2hnk_A 87 KILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDADKENYPNYYPL 166 (239)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHH
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccccccccCCCCCcCEEEEeCCHHHHHHHHHH
Confidence 489999999999999999999998878999999999877655210 000 1 689999999998889999999
Q ss_pred HHhcccCCeEEEEecccccccccCCCCCCCCCCCcchHHHHHHHHHHhhcCCCeeEEeeecCceeEEEEEeC
Q 032390 71 LMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNRSLADDPRVQLSHVALGDGITICRRIF 142 (142)
Q Consensus 71 ~~~~L~~gG~iv~dn~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~gdG~~i~~~~~ 142 (142)
+.++|+|||++++++++|.|.+..+... .+....+++|++.+..++++.++++|++||+.+++|+.
T Consensus 167 ~~~~L~pgG~lv~~~~~~~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~ 232 (239)
T 2hnk_A 167 ILKLLKPGGLLIADNVLWDGSVADLSHQ------EPSTVGIRKFNELVYNDSLVDVSLVPIADGVSLVRKRL 232 (239)
T ss_dssp HHHHEEEEEEEEEECSSGGGGGGCTTCC------CHHHHHHHHHHHHHHHCTTEEEEEECSTTCEEEEEECC
T ss_pred HHHHcCCCeEEEEEccccCCcccCcccc------chHHHHHHHHHHHHhhCCCeEEEEEEcCCceEeeeehh
Confidence 9999999999999999999987765421 11677899999999999999999999999999999874
No 13
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.85 E-value=7.5e-21 Score=137.94 Aligned_cols=135 Identities=25% Similarity=0.409 Sum_probs=100.2
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|+++|+++++++.|+++++..|+.++++++.+|+.+.++... ..++||+||+|++...+..+++.+.++|+|||.
T Consensus 80 ~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~----~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~ 155 (233)
T 2gpy_A 80 TIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLE----LYPLFDVLFIDAAKGQYRRFFDMYSPMVRPGGL 155 (233)
T ss_dssp EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHT----TSCCEEEEEEEGGGSCHHHHHHHHGGGEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcc----cCCCccEEEECCCHHHHHHHHHHHHHHcCCCeE
Confidence 4899999999999999999999998789999999998766541 136899999999888889999999999999999
Q ss_pred EEEecccccccccCCCCCCCCCCCcchHHHHHHHHHHhhcCCCeeEEeeecCceeEEEEEe
Q 032390 81 AVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNRSLADDPRVQLSHVALGDGITICRRI 141 (142)
Q Consensus 81 iv~dn~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~gdG~~i~~~~ 141 (142)
++++|++|.|.+..++. .+.+... ....+++|+..+..++++.++++|++||+.+++|+
T Consensus 156 lv~~~~~~~g~~~~~~~-~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~p~~dG~~~~~~~ 214 (233)
T 2gpy_A 156 ILSDNVLFRGLVAETDI-EHKRHKQ-LATKIDTYNQWLLEHPQYDTRIFPVGDGIAISIKR 214 (233)
T ss_dssp EEEETTTC---------------------------CTTTTCTTEEEEEECSTTCEEEEEEC
T ss_pred EEEEcCCcCCccCCccc-cccchhH-HHHHHHHHHHHHHhCCCeEEEEEEcCCeEEEEEEc
Confidence 99999999987654431 1111111 34578899999999999999999999999999875
No 14
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.83 E-value=8e-20 Score=131.76 Aligned_cols=120 Identities=21% Similarity=0.311 Sum_probs=99.4
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHH--hcccCC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLM--KLLKVG 78 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~--~~L~~g 78 (142)
+|+++|+++++++.|+++++..++.++++++.+|+.+.++.+... ...++||+||+|+....|...++.+. ++|+||
T Consensus 85 ~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~-~~~~~fD~V~~d~~~~~~~~~~~~~~~~~~Lkpg 163 (221)
T 3u81_A 85 RLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKK-YDVDTLDMVFLDHWKDRYLPDTLLLEKCGLLRKG 163 (221)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTT-SCCCCCSEEEECSCGGGHHHHHHHHHHTTCCCTT
T ss_pred EEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHh-cCCCceEEEEEcCCcccchHHHHHHHhccccCCC
Confidence 489999999999999999999999889999999999887665200 00168999999998877775443333 899999
Q ss_pred eEEEEecccccccccCCCCCCCCCCCcchHHHHHHHHHHhhcCCCeeEEeee-------cCceeEEEEEe
Q 032390 79 GIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNRSLADDPRVQLSHVA-------LGDGITICRRI 141 (142)
Q Consensus 79 G~iv~dn~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp-------~gdG~~i~~~~ 141 (142)
|+++++|+.+++ .++|++.+.++++|.++++| ++||+.+++++
T Consensus 164 G~lv~~~~~~~~--------------------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~ 213 (221)
T 3u81_A 164 TVLLADNVIVPG--------------------TPDFLAYVRGSSSFECTHYSSYLEYMKVVDGLEKAIYQ 213 (221)
T ss_dssp CEEEESCCCCCC--------------------CHHHHHHHHHCTTEEEEEEEEEETTTTEEEEEEEEEEC
T ss_pred eEEEEeCCCCcc--------------------hHHHHHHHhhCCCceEEEcccccccCCCCCceEEEEEe
Confidence 999999998743 26778888899999999999 79999999875
No 15
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=99.63 E-value=4.4e-16 Score=111.44 Aligned_cols=108 Identities=8% Similarity=-0.012 Sum_probs=82.5
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCC--CCcEEEEEccHHHH--------------HHHHhhc---ccCCCceeEEEEcCCC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGV--DHKINFIESEALSV--------------LDQLLKY---SENEGSFDYAFVDADK 61 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~--~~~v~~~~~da~~~--------------l~~~~~~---~~~~~~fD~IfiD~~~ 61 (142)
+|++||.|++.++.|+++++++|+ .++|++++||+.+. ++.+... ....++||+||+|+.+
T Consensus 53 ~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k 132 (202)
T 3cvo_A 53 HVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGRF 132 (202)
T ss_dssp EEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSSS
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhHHHHhhhhhccccCCCCCEEEEeCCC
Confidence 489999999999999999999998 78999999997543 2221100 0013689999999987
Q ss_pred cCcHHHHHHHHhcccCCeEEEEecccccccccCCCCCCCCCCCcchHHHHHHHHHHhhcCCCeeE
Q 032390 62 DNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNRSLADDPRVQL 126 (142)
Q Consensus 62 ~~~~~~~~~~~~~L~~gG~iv~dn~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 126 (142)
. ..++..++++|+|||+|++||+++++ +...+.+|...+...++...
T Consensus 133 ~--~~~~~~~l~~l~~GG~Iv~DNv~~r~----------------~y~~v~~~~~~~~~~~~~a~ 179 (202)
T 3cvo_A 133 R--VGCALATAFSITRPVTLLFDDYSQRR----------------WQHQVEEFLGAPLMIGRLAA 179 (202)
T ss_dssp H--HHHHHHHHHHCSSCEEEEETTGGGCS----------------SGGGGHHHHCCCEEETTEEE
T ss_pred c--hhHHHHHHHhcCCCeEEEEeCCcCCc----------------chHHHHHHHhHHhhcCceEE
Confidence 6 47778888999999999999987643 23357788877766666543
No 16
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=99.55 E-value=1.5e-14 Score=108.36 Aligned_cols=103 Identities=11% Similarity=0.093 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHcCCC-CcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC-cCcHHHHHHHHhcccCCeEEEEecccc
Q 032390 11 TYEIGLPIIKKAGVD-HKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK-DNYCNYHERLMKLLKVGGIAVYDNTLW 88 (142)
Q Consensus 11 ~~~~a~~~~~~~~~~-~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~-~~~~~~~~~~~~~L~~gG~iv~dn~~~ 88 (142)
.++.+++|+++.|+. ++|+++.|++.+.++.+ ..++||+||+|+++ ..|..+++.+.++|+|||+|++||+.|
T Consensus 173 ~~~~ar~n~~~~gl~~~~I~li~Gda~etL~~~-----~~~~~d~vfIDaD~y~~~~~~Le~~~p~L~pGGiIv~DD~~~ 247 (282)
T 2wk1_A 173 SEEEVRRNFRNYDLLDEQVRFLPGWFKDTLPTA-----PIDTLAVLRMDGDLYESTWDTLTNLYPKVSVGGYVIVDDYMM 247 (282)
T ss_dssp CHHHHHHHHHHTTCCSTTEEEEESCHHHHSTTC-----CCCCEEEEEECCCSHHHHHHHHHHHGGGEEEEEEEEESSCTT
T ss_pred HHHHHHHHHHHcCCCcCceEEEEeCHHHHHhhC-----CCCCEEEEEEcCCccccHHHHHHHHHhhcCCCEEEEEcCCCC
Confidence 577899999999994 89999999999998865 24689999999997 346788999999999999999999864
Q ss_pred -cccccCCCCCCCCCCCcchHHHHHHHHHHhhcCCCeeEEeeecCceeEEE
Q 032390 89 -GGTVAVPEEQVPDHFRGSSRQAILDLNRSLADDPRVQLSHVALGDGITIC 138 (142)
Q Consensus 89 -~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~gdG~~i~ 138 (142)
.| ..+++++|++. .++...+++++.|...-
T Consensus 248 ~~G----------------~~~Av~Ef~~~----~~i~~~i~~~~~~~v~~ 278 (282)
T 2wk1_A 248 CPP----------------CKDAVDEYRAK----FDIADELITIDRDGVYW 278 (282)
T ss_dssp CHH----------------HHHHHHHHHHH----TTCCSCCEECSSSCEEE
T ss_pred CHH----------------HHHHHHHHHHh----cCCceEEEEecCEEEEE
Confidence 22 45677888654 44666678887655433
No 17
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.53 E-value=1.7e-14 Score=109.52 Aligned_cols=121 Identities=19% Similarity=0.304 Sum_probs=91.3
Q ss_pred CEEEEeCChhHHHHHHHHHHHc--CC-CCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC------cCc-HHHHHH
Q 032390 1 MITAIDVNRETYEIGLPIIKKA--GV-DHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK------DNY-CNYHER 70 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~--~~-~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~------~~~-~~~~~~ 70 (142)
+|+++|+|+.+++.|++++... ++ .++++++.+|+.++++.. .++||+|++|+.. ..| .++++.
T Consensus 134 ~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~------~~~fD~Ii~d~~~~~~~~~~l~t~~~l~~ 207 (314)
T 2b2c_A 134 KVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNH------KNEFDVIITDSSDPVGPAESLFGQSYYEL 207 (314)
T ss_dssp EEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHC------TTCEEEEEECCC-------------HHHH
T ss_pred EEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhc------CCCceEEEEcCCCCCCcchhhhHHHHHHH
Confidence 4899999999999999998764 44 468999999999987652 5689999999842 123 678999
Q ss_pred HHhcccCCeEEEEecccccccccCCCCCCCCCCCcchHHHHHHHHHHhhcCCCeeEEeeec---Cc-eeEEEEE
Q 032390 71 LMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNRSLADDPRVQLSHVAL---GD-GITICRR 140 (142)
Q Consensus 71 ~~~~L~~gG~iv~dn~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~---gd-G~~i~~~ 140 (142)
+.+.|+|||++++++-. .+.. .. ....+.++++.++.+.++.++.+|. |+ |+.++.+
T Consensus 208 ~~~~LkpgG~lv~~~~~----~~~~--------~~-~~~~~~~~l~~vF~~v~~~~~~iP~~~~g~~g~~~ask 268 (314)
T 2b2c_A 208 LRDALKEDGILSSQGES----VWLH--------LP-LIAHLVAFNRKIFPAVTYAQSIVSTYPSGSMGYLICAK 268 (314)
T ss_dssp HHHHEEEEEEEEEECCC----TTTC--------HH-HHHHHHHHHHHHCSEEEEEEEECTTSGGGEEEEEEEES
T ss_pred HHhhcCCCeEEEEECCC----cccC--------HH-HHHHHHHHHHHHCCcceEEEEEecCcCCCceEEEEEeC
Confidence 99999999999997521 1111 01 5567888888888888888888887 45 8888765
No 18
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.53 E-value=3.5e-14 Score=107.36 Aligned_cols=120 Identities=13% Similarity=0.268 Sum_probs=93.9
Q ss_pred CEEEEeCChhHHHHHHHHHHH--cCC-CCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc-------CcHHHHHH
Q 032390 1 MITAIDVNRETYEIGLPIIKK--AGV-DHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD-------NYCNYHER 70 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~--~~~-~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~-------~~~~~~~~ 70 (142)
+|++||+|+++++.|++++.. .++ .++++++.+|+.++++.. .++||+|++|+..+ .+.++++.
T Consensus 121 ~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~------~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~ 194 (304)
T 2o07_A 121 SVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQN------QDAFDVIITDSSDPMGPAESLFKESYYQL 194 (304)
T ss_dssp EEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTC------SSCEEEEEEECC-----------CHHHHH
T ss_pred EEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhC------CCCceEEEECCCCCCCcchhhhHHHHHHH
Confidence 489999999999999999876 344 468999999999987643 56899999998653 23568999
Q ss_pred HHhcccCCeEEEEeccc-ccccccCCCCCCCCCCCcchHHHHHHHHHHhhcCCCeeEEeeec---C-ceeEEEEE
Q 032390 71 LMKLLKVGGIAVYDNTL-WGGTVAVPEEQVPDHFRGSSRQAILDLNRSLADDPRVQLSHVAL---G-DGITICRR 140 (142)
Q Consensus 71 ~~~~L~~gG~iv~dn~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~---g-dG~~i~~~ 140 (142)
+.+.|+|||++++++.. |.. + + ..+.++++++.++.+.++..+.+|. | +|+.++.+
T Consensus 195 ~~~~LkpgG~lv~~~~~~~~~----~---------~-~~~~~~~~l~~~f~~v~~~~~~vP~~~~g~~g~~~as~ 255 (304)
T 2o07_A 195 MKTALKEDGVLCCQGECQWLH----L---------D-LIKEMRQFCQSLFPVVAYAYCTIPTYPSGQIGFMLCSK 255 (304)
T ss_dssp HHHHEEEEEEEEEEEECTTTC----H---------H-HHHHHHHHHHHHCSEEEEEEEECTTSGGGEEEEEEEES
T ss_pred HHhccCCCeEEEEecCCcccc----h---------H-HHHHHHHHHHHhCCCceeEEEEeccccCcceEEEEEeC
Confidence 99999999999998633 321 0 1 5667899999999888888888887 3 58888764
No 19
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.41 E-value=2.3e-12 Score=97.61 Aligned_cols=122 Identities=13% Similarity=0.114 Sum_probs=90.9
Q ss_pred CEEEEeCChhHHHHHHHHHHHc--C-C-CCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC----------cHH
Q 032390 1 MITAIDVNRETYEIGLPIIKKA--G-V-DHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN----------YCN 66 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~--~-~-~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~----------~~~ 66 (142)
+|+++|+|+.+++.|++++... + + .++++++.+|+.++++.. .++||+|++|+..+. ..+
T Consensus 103 ~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~------~~~fD~Ii~d~~~~~~~~~~~~~l~~~~ 176 (314)
T 1uir_A 103 KAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERT------EERYDVVIIDLTDPVGEDNPARLLYTVE 176 (314)
T ss_dssp EEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHC------CCCEEEEEEECCCCBSTTCGGGGGSSHH
T ss_pred EEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhc------CCCccEEEECCCCcccccCcchhccHHH
Confidence 4899999999999999998752 2 3 468999999999987653 578999999986543 478
Q ss_pred HHHHHHhcccCCeEEEEecccccccccCCCCCCCCCCCcchHHHHHHHHHHhhcCCCeeEEeeecCce---eEEEEE
Q 032390 67 YHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNRSLADDPRVQLSHVALGDG---ITICRR 140 (142)
Q Consensus 67 ~~~~~~~~L~~gG~iv~dn~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~gdG---~~i~~~ 140 (142)
+++.+.+.|+|||++++....... ..+ + ....+.+.++.++.+..+..+.+|.++| +.++.+
T Consensus 177 ~l~~~~~~LkpgG~lv~~~~~~~~--~~~---------~-~~~~~~~~l~~~F~~v~~~~~~vP~~~g~~~~~~as~ 241 (314)
T 1uir_A 177 FYRLVKAHLNPGGVMGMQTGMILL--THH---------R-VHPVVHRTVREAFRYVRSYKNHIPGFFLNFGFLLASD 241 (314)
T ss_dssp HHHHHHHTEEEEEEEEEEEEEECC--------------C-HHHHHHHHHHTTCSEEEEEEEEEGGGTEEEEEEEEES
T ss_pred HHHHHHHhcCCCcEEEEEccCccc--cCH---------H-HHHHHHHHHHHHCCceEEEEEecCCCCCeEEEEEEEC
Confidence 999999999999999986322100 001 1 5566777777777777777788898766 455543
No 20
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.41 E-value=1.7e-12 Score=96.92 Aligned_cols=119 Identities=11% Similarity=0.108 Sum_probs=88.5
Q ss_pred CEEEEeCChhHHHHHHHHHHHc--CC--------CCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc------C-
Q 032390 1 MITAIDVNRETYEIGLPIIKKA--GV--------DHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD------N- 63 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~--~~--------~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~------~- 63 (142)
+|+++|+|+.+++.|++++ .. ++ .++++++.+|+.++++. .++||+|++|++.+ .
T Consensus 100 ~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-------~~~fD~Ii~d~~~~~~~~~~l~ 171 (281)
T 1mjf_A 100 EVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-------NRGFDVIIADSTDPVGPAKVLF 171 (281)
T ss_dssp EEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-------CCCEEEEEEECCCCC-----TT
T ss_pred EEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc-------cCCeeEEEECCCCCCCcchhhh
Confidence 4899999999999999998 54 33 46899999999988764 35799999998632 1
Q ss_pred cHHHHHHHHhcccCCeEEEEecccccccccCCCCCCCCCCCcchHHHHHHHHHHhhcCCCeeEEeeecCce---eEEEEE
Q 032390 64 YCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNRSLADDPRVQLSHVALGDG---ITICRR 140 (142)
Q Consensus 64 ~~~~~~~~~~~L~~gG~iv~dn~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~gdG---~~i~~~ 140 (142)
..++++.+.+.|+|||+++++.... ... .+ ..+.+.+.++.++.+..+..+.+|.++| +.++.+
T Consensus 172 ~~~~l~~~~~~L~pgG~lv~~~~~~----~~~--------~~-~~~~~~~~l~~~f~~v~~~~~~vP~~~g~~~~~~as~ 238 (281)
T 1mjf_A 172 SEEFYRYVYDALNNPGIYVTQAGSV----YLF--------TD-ELISAYKEMKKVFDRVYYYSFPVIGYASPWAFLVGVK 238 (281)
T ss_dssp SHHHHHHHHHHEEEEEEEEEEEEET----TTS--------HH-HHHHHHHHHHHHCSEEEEEEECCTTSSSSEEEEEEEE
T ss_pred HHHHHHHHHHhcCCCcEEEEEcCCc----ccC--------HH-HHHHHHHHHHHHCCceEEEEEecCCCCceEEEEEeeC
Confidence 4778999999999999999873221 100 01 4556677777777666777777888755 666665
No 21
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.35 E-value=4.3e-12 Score=94.54 Aligned_cols=79 Identities=18% Similarity=0.283 Sum_probs=65.8
Q ss_pred CEEEEeCChhHHHHHHHHHHHc--CC-CCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC-------cHHHHHH
Q 032390 1 MITAIDVNRETYEIGLPIIKKA--GV-DHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN-------YCNYHER 70 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~--~~-~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~-------~~~~~~~ 70 (142)
+|++||+|+++++.|++++... ++ .++++++.+|+.++++.. .++||+|++|+..+. ..++++.
T Consensus 101 ~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~------~~~fD~Ii~d~~~~~~~~~~l~~~~~~~~ 174 (275)
T 1iy9_A 101 KATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKS------ENQYDVIMVDSTEPVGPAVNLFTKGFYAG 174 (275)
T ss_dssp EEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTC------CSCEEEEEESCSSCCSCCCCCSTTHHHHH
T ss_pred eEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhC------CCCeeEEEECCCCCCCcchhhhHHHHHHH
Confidence 4899999999999999998653 34 468999999999987643 568999999986432 2578999
Q ss_pred HHhcccCCeEEEEec
Q 032390 71 LMKLLKVGGIAVYDN 85 (142)
Q Consensus 71 ~~~~L~~gG~iv~dn 85 (142)
+.+.|+|||++++..
T Consensus 175 ~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 175 IAKALKEDGIFVAQT 189 (275)
T ss_dssp HHHHEEEEEEEEEEC
T ss_pred HHHhcCCCcEEEEEc
Confidence 999999999999873
No 22
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.32 E-value=1.2e-11 Score=94.63 Aligned_cols=83 Identities=19% Similarity=0.473 Sum_probs=67.9
Q ss_pred CEEEEeCChhHHHHHHHHHHHc--CC-CCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC-------cHHHHHH
Q 032390 1 MITAIDVNRETYEIGLPIIKKA--GV-DHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN-------YCNYHER 70 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~--~~-~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~-------~~~~~~~ 70 (142)
+|+++|+|+.+++.|++++... ++ .++++++.+|+.++++.+ ..++||+|++|+..+. +..+++.
T Consensus 146 ~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~-----~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~ 220 (334)
T 1xj5_A 146 QIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNA-----AEGSYDAVIVDSSDPIGPAKELFEKPFFQS 220 (334)
T ss_dssp EEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTS-----CTTCEEEEEECCCCTTSGGGGGGSHHHHHH
T ss_pred EEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhc-----cCCCccEEEECCCCccCcchhhhHHHHHHH
Confidence 4899999999999999998764 55 368999999999987653 1468999999975221 5789999
Q ss_pred HHhcccCCeEEEEe-cccc
Q 032390 71 LMKLLKVGGIAVYD-NTLW 88 (142)
Q Consensus 71 ~~~~L~~gG~iv~d-n~~~ 88 (142)
+.+.|+|||+++++ +..|
T Consensus 221 ~~~~LkpgG~lv~~~~~~~ 239 (334)
T 1xj5_A 221 VARALRPGGVVCTQAESLW 239 (334)
T ss_dssp HHHHEEEEEEEEEECCCTT
T ss_pred HHHhcCCCcEEEEecCCcc
Confidence 99999999999997 4554
No 23
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.30 E-value=2.8e-11 Score=84.70 Aligned_cols=81 Identities=11% Similarity=0.120 Sum_probs=68.7
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC----cHHHHHHHHh--c
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN----YCNYHERLMK--L 74 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~----~~~~~~~~~~--~ 74 (142)
+|+++|+|+++++.|+++++..++ ++++++++|+.+++..+ ..++||+|++|++... +...++.+.+ +
T Consensus 69 ~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~-----~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~ 142 (189)
T 3p9n_A 69 SVLFVESDQRSAAVIARNIEALGL-SGATLRRGAVAAVVAAG-----TTSPVDLVLADPPYNVDSADVDAILAALGTNGW 142 (189)
T ss_dssp EEEEEECCHHHHHHHHHHHHHHTC-SCEEEEESCHHHHHHHC-----CSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSS
T ss_pred eEEEEECCHHHHHHHHHHHHHcCC-CceEEEEccHHHHHhhc-----cCCCccEEEECCCCCcchhhHHHHHHHHHhcCc
Confidence 489999999999999999999998 68999999999987654 2578999999987543 5667788877 9
Q ss_pred ccCCeEEEEeccc
Q 032390 75 LKVGGIAVYDNTL 87 (142)
Q Consensus 75 L~~gG~iv~dn~~ 87 (142)
|+|||+++++...
T Consensus 143 L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 143 TREGTVAVVERAT 155 (189)
T ss_dssp CCTTCEEEEEEET
T ss_pred cCCCeEEEEEecC
Confidence 9999999997544
No 24
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.29 E-value=1.4e-11 Score=92.67 Aligned_cols=76 Identities=16% Similarity=0.285 Sum_probs=68.8
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|+++|+|+++++.|++++++.|+ ++++++++|+.++ + +++||+||+++..+++..+++.+.+.|+|||.
T Consensus 148 ~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l-~--------d~~FDvV~~~a~~~d~~~~l~el~r~LkPGG~ 217 (298)
T 3fpf_A 148 RVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVI-D--------GLEFDVLMVAALAEPKRRVFRNIHRYVDTETR 217 (298)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGG-G--------GCCCSEEEECTTCSCHHHHHHHHHHHCCTTCE
T ss_pred EEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhC-C--------CCCcCEEEECCCccCHHHHHHHHHHHcCCCcE
Confidence 489999999999999999999999 7999999999874 2 46899999998877888999999999999999
Q ss_pred EEEecc
Q 032390 81 AVYDNT 86 (142)
Q Consensus 81 iv~dn~ 86 (142)
+++.+.
T Consensus 218 Lvv~~~ 223 (298)
T 3fpf_A 218 IIYRTY 223 (298)
T ss_dssp EEEEEC
T ss_pred EEEEcC
Confidence 999764
No 25
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.27 E-value=3.9e-11 Score=92.43 Aligned_cols=124 Identities=15% Similarity=0.152 Sum_probs=82.4
Q ss_pred CEEEEeCChhHHHHHHHHHHHcC---CC----CcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC-c--------Cc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAG---VD----HKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK-D--------NY 64 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~---~~----~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~-~--------~~ 64 (142)
+|++||+|+.+++.|++++...+ ++ ++++++.+|+.++++...+ ..++||+|++|++. + ..
T Consensus 213 ~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~---~~~~fDvII~D~~d~P~~~~p~~L~t 289 (364)
T 2qfm_A 213 MVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAK---EGREFDYVINDLTAVPISTSPEEDST 289 (364)
T ss_dssp EEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHH---HTCCEEEEEEECCSSCCCCC----CH
T ss_pred EEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhc---cCCCceEEEECCCCcccCcCchhhhH
Confidence 48999999999999999986432 33 2799999999999986521 15689999999864 2 22
Q ss_pred HHHHHHH----HhcccCCeEEEEecccccccccCCCCCCCCCCCcchHHHHHHHHHHhhcCCCe--eEEeeecC---cee
Q 032390 65 CNYHERL----MKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNRSLADDPRV--QLSHVALG---DGI 135 (142)
Q Consensus 65 ~~~~~~~----~~~L~~gG~iv~dn~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~lp~g---dG~ 135 (142)
.++++.+ .+.|+|||++++...... .+ + ....+++-+..++..-+| .+..+|.- +|+
T Consensus 290 ~eFy~~~~~~~~~~L~pgGilv~qs~s~~----~~---------e-~~~~~~~~l~~~F~~v~~~~~~~~vPsy~~~w~f 355 (364)
T 2qfm_A 290 WEFLRLILDLSMKVLKQDGKYFTQGNCVN----LT---------E-ALSLYEEQLGRLYCPVEFSKEIVCVPSYLELWVF 355 (364)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEEEEEEETT----CH---------H-HHHHHHHHHTTSSSCEEEEEEEECCGGGSSCEEE
T ss_pred HHHHHHHHHHHHhhCCCCcEEEEEcCCcc----hH---------H-HHHHHHHHHHHhCCceEEeeEeeecCCchhheEe
Confidence 4666666 899999999998754321 01 0 222333333345555555 34556643 577
Q ss_pred EEEEEe
Q 032390 136 TICRRI 141 (142)
Q Consensus 136 ~i~~~~ 141 (142)
.++.|+
T Consensus 356 ~~~~k~ 361 (364)
T 2qfm_A 356 YTVWKK 361 (364)
T ss_dssp EEEEEC
T ss_pred EEeecc
Confidence 777664
No 26
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.26 E-value=1.3e-10 Score=92.43 Aligned_cols=80 Identities=16% Similarity=0.254 Sum_probs=68.0
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC-----------------
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN----------------- 63 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~----------------- 63 (142)
+|+++|+++.+++.+++|++++|+. ++++++|+.++.... .++||+|++|+++..
T Consensus 128 ~V~AvDis~~~l~~a~~n~~r~G~~--v~~~~~Da~~l~~~~------~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~ 199 (464)
T 3m6w_A 128 LLLANEVDGKRVRGLLENVERWGAP--LAVTQAPPRALAEAF------GTYFHRVLLDAPCSGEGMFRKDREAARHWGPS 199 (464)
T ss_dssp EEEEECSCHHHHHHHHHHHHHHCCC--CEEECSCHHHHHHHH------CSCEEEEEEECCCCCGGGTTTCTTSGGGCCTT
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCe--EEEEECCHHHhhhhc------cccCCEEEECCCcCCccccccChHHhhhcCHH
Confidence 3899999999999999999999985 999999998875433 578999999998521
Q ss_pred --------cHHHHHHHHhcccCCeEEEEecccc
Q 032390 64 --------YCNYHERLMKLLKVGGIAVYDNTLW 88 (142)
Q Consensus 64 --------~~~~~~~~~~~L~~gG~iv~dn~~~ 88 (142)
...+++.+.++|+|||.+++..+.+
T Consensus 200 ~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~ 232 (464)
T 3m6w_A 200 APKRMAEVQKALLAQASRLLGPGGVLVYSTCTF 232 (464)
T ss_dssp HHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccC
Confidence 1567888889999999999988765
No 27
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.25 E-value=2.9e-11 Score=90.85 Aligned_cols=79 Identities=14% Similarity=0.234 Sum_probs=63.7
Q ss_pred CEEEEeCChhHHHHHHHHHHH--cCC-CCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc--------CcHHHHH
Q 032390 1 MITAIDVNRETYEIGLPIIKK--AGV-DHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD--------NYCNYHE 69 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~--~~~-~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~--------~~~~~~~ 69 (142)
+|+++|+|+.+++.|++++.. .++ .++++++.+|+.++++.. .++||+|++|++.+ ...++++
T Consensus 116 ~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~------~~~fD~Ii~d~~~~~~~~~~~l~~~~~l~ 189 (296)
T 1inl_A 116 KAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKF------KNEFDVIIIDSTDPTAGQGGHLFTEEFYQ 189 (296)
T ss_dssp EEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGC------SSCEEEEEEEC----------CCSHHHHH
T ss_pred EEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhC------CCCceEEEEcCCCcccCchhhhhHHHHHH
Confidence 489999999999999999865 334 468999999999876542 46899999998643 2378899
Q ss_pred HHHhcccCCeEEEEec
Q 032390 70 RLMKLLKVGGIAVYDN 85 (142)
Q Consensus 70 ~~~~~L~~gG~iv~dn 85 (142)
.+.+.|+|||++++..
T Consensus 190 ~~~~~LkpgG~lv~~~ 205 (296)
T 1inl_A 190 ACYDALKEDGVFSAET 205 (296)
T ss_dssp HHHHHEEEEEEEEEEC
T ss_pred HHHHhcCCCcEEEEEc
Confidence 9999999999999863
No 28
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.25 E-value=1.4e-10 Score=92.00 Aligned_cols=81 Identities=19% Similarity=0.251 Sum_probs=68.4
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC-----------------
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN----------------- 63 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~----------------- 63 (142)
+|+++|+++.+++.+++|++++|+. ++.++++|+.++.... .+.||+|++|+++..
T Consensus 132 ~V~AvDis~~rl~~~~~n~~r~g~~-nv~v~~~Da~~l~~~~------~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~ 204 (456)
T 3m4x_A 132 LLVTNEIFPKRAKILSENIERWGVS-NAIVTNHAPAELVPHF------SGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEE 204 (456)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHTCS-SEEEECCCHHHHHHHH------TTCEEEEEEECCCCCGGGTTTCHHHHHHCCTT
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEeCCHHHhhhhc------cccCCEEEECCCCCCccccccCHHHhhhcCHH
Confidence 3899999999999999999999996 6999999998875544 578999999998422
Q ss_pred --------cHHHHHHHHhcccCCeEEEEecccc
Q 032390 64 --------YCNYHERLMKLLKVGGIAVYDNTLW 88 (142)
Q Consensus 64 --------~~~~~~~~~~~L~~gG~iv~dn~~~ 88 (142)
...+++.+.++|+|||.+++..+.+
T Consensus 205 ~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~ 237 (456)
T 3m4x_A 205 SPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTF 237 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeec
Confidence 1256788889999999999988765
No 29
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.22 E-value=1.5e-11 Score=92.46 Aligned_cols=79 Identities=18% Similarity=0.302 Sum_probs=61.5
Q ss_pred CEEEEeCChhHHHHHHHHHHHcC---C-CCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC-------cHHHHH
Q 032390 1 MITAIDVNRETYEIGLPIIKKAG---V-DHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN-------YCNYHE 69 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~---~-~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~-------~~~~~~ 69 (142)
+|++||+|+++++.|++++...+ + .++++++.+|+.++++.. .++||+|++|+..+. ..++++
T Consensus 109 ~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~------~~~fDvIi~D~~~p~~~~~~l~~~~f~~ 182 (294)
T 3adn_A 109 SITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQT------SQTFDVIISDCTDPIGPGESLFTSAFYE 182 (294)
T ss_dssp EEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CC------CCCEEEEEECC----------CCHHHHH
T ss_pred EEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhc------CCCccEEEECCCCccCcchhccHHHHHH
Confidence 48999999999999999998653 2 358999999999887642 578999999986431 267899
Q ss_pred HHHhcccCCeEEEEec
Q 032390 70 RLMKLLKVGGIAVYDN 85 (142)
Q Consensus 70 ~~~~~L~~gG~iv~dn 85 (142)
.+.+.|+|||++++..
T Consensus 183 ~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 183 GCKRCLNPGGIFVAQN 198 (294)
T ss_dssp HHHHTEEEEEEEEEEE
T ss_pred HHHHhcCCCCEEEEec
Confidence 9999999999999863
No 30
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.21 E-value=2.5e-10 Score=87.11 Aligned_cols=84 Identities=13% Similarity=0.190 Sum_probs=68.8
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCC-cEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc-------------CcHH
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDH-KINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD-------------NYCN 66 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~-~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~-------------~~~~ 66 (142)
+|+++|+|+.+++.|++|++.+++.+ +++++++|+.++++.+.. ..++||+|++|++.- .+..
T Consensus 177 ~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~---~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ 253 (332)
T 2igt_A 177 EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREER---RGSTYDIILTDPPKFGRGTHGEVWQLFDHLPL 253 (332)
T ss_dssp EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHH---HTCCBSEEEECCCSEEECTTCCEEEHHHHHHH
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHh---cCCCceEEEECCccccCCchHHHHHHHHHHHH
Confidence 48999999999999999999999876 599999999998765421 146899999999731 2567
Q ss_pred HHHHHHhcccCCeEEEEeccc
Q 032390 67 YHERLMKLLKVGGIAVYDNTL 87 (142)
Q Consensus 67 ~~~~~~~~L~~gG~iv~dn~~ 87 (142)
+++.+.++|+|||++++.+..
T Consensus 254 ll~~~~~~LkpgG~lli~~~~ 274 (332)
T 2igt_A 254 MLDICREILSPKALGLVLTAY 274 (332)
T ss_dssp HHHHHHHTBCTTCCEEEEEEC
T ss_pred HHHHHHHhcCcCcEEEEEECC
Confidence 888889999999997776543
No 31
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.21 E-value=2.4e-10 Score=88.78 Aligned_cols=83 Identities=11% Similarity=0.269 Sum_probs=68.7
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCC-cEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc------------CcHHH
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDH-KINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD------------NYCNY 67 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~-~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~------------~~~~~ 67 (142)
+|+++|+|+.+++.|++|++.+|+.+ +++++.+|+.++++.+.. .+.+||+|++|++.- .|.++
T Consensus 237 ~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~---~~~~fD~Ii~DPP~~~~~~~~~~~~~~~~~~l 313 (385)
T 2b78_A 237 ATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARR---HHLTYDIIIIDPPSFARNKKEVFSVSKDYHKL 313 (385)
T ss_dssp EEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHH---TTCCEEEEEECCCCC-----CCCCHHHHHHHH
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHH---hCCCccEEEECCCCCCCChhhHHHHHHHHHHH
Confidence 48999999999999999999999875 899999999998876532 145899999999762 14456
Q ss_pred HHHHHhcccCCeEEEEecc
Q 032390 68 HERLMKLLKVGGIAVYDNT 86 (142)
Q Consensus 68 ~~~~~~~L~~gG~iv~dn~ 86 (142)
+..+.++|+|||++++...
T Consensus 314 l~~~~~~L~pgG~l~~~~~ 332 (385)
T 2b78_A 314 IRQGLEILSENGLIIASTN 332 (385)
T ss_dssp HHHHHHTEEEEEEEEEEEC
T ss_pred HHHHHHhcCCCcEEEEEeC
Confidence 6777899999999988644
No 32
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.20 E-value=4.9e-11 Score=82.36 Aligned_cols=81 Identities=22% Similarity=0.299 Sum_probs=67.6
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC--cCcHHHHHHHH--hccc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK--DNYCNYHERLM--KLLK 76 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~--~~~~~~~~~~~--~~L~ 76 (142)
+|+++|+|+++++.|+++++..++.++++++.+|+.+.++.. .++||+|++|++. ..+...++.+. +.|+
T Consensus 56 ~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~------~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~ 129 (177)
T 2esr_A 56 AAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCL------TGRFDLVFLDPPYAKETIVATIEALAAKNLLS 129 (177)
T ss_dssp EEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHB------CSCEEEEEECCSSHHHHHHHHHHHHHHTTCEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhh------cCCCCEEEECCCCCcchHHHHHHHHHhCCCcC
Confidence 489999999999999999999998778999999999876653 4679999999874 33456677776 8999
Q ss_pred CCeEEEEeccc
Q 032390 77 VGGIAVYDNTL 87 (142)
Q Consensus 77 ~gG~iv~dn~~ 87 (142)
|||++++....
T Consensus 130 ~gG~l~~~~~~ 140 (177)
T 2esr_A 130 EQVMVVCETDK 140 (177)
T ss_dssp EEEEEEEEEET
T ss_pred CCcEEEEEECC
Confidence 99999986443
No 33
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.20 E-value=2e-10 Score=89.36 Aligned_cols=83 Identities=27% Similarity=0.373 Sum_probs=70.3
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC------------cCcHHHH
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK------------DNYCNYH 68 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~------------~~~~~~~ 68 (142)
+|+++|+++.+++.|++|++.+|+.++++++.+|+.++++.+.. ..++||+|++|++. ..+..++
T Consensus 242 ~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~---~~~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l 318 (396)
T 2as0_A 242 EVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQK---KGEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVN 318 (396)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHH---TTCCEEEEEECCCCSCSSGGGHHHHHHHHHHHH
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHh---hCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHH
Confidence 48999999999999999999999876899999999998776532 14689999999985 4467788
Q ss_pred HHHHhcccCCeEEEEecc
Q 032390 69 ERLMKLLKVGGIAVYDNT 86 (142)
Q Consensus 69 ~~~~~~L~~gG~iv~dn~ 86 (142)
..+.++|+|||.+++..+
T Consensus 319 ~~~~~~LkpgG~lv~~~~ 336 (396)
T 2as0_A 319 FAGLNLVKDGGILVTCSC 336 (396)
T ss_dssp HHHHTTEEEEEEEEEEEC
T ss_pred HHHHHhcCCCcEEEEEEC
Confidence 889999999998887644
No 34
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.18 E-value=4.7e-11 Score=84.70 Aligned_cols=82 Identities=15% Similarity=0.166 Sum_probs=66.4
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCC-CcEEEEEccHHHHHHHHhhcccCCCc-eeEEEEcCC--CcCcHHHHHHH--Hhc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVD-HKINFIESEALSVLDQLLKYSENEGS-FDYAFVDAD--KDNYCNYHERL--MKL 74 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~-~~v~~~~~da~~~l~~~~~~~~~~~~-fD~IfiD~~--~~~~~~~~~~~--~~~ 74 (142)
+|+++|+|+++++.|++|++..++. ++++++.+|+.++++.+ ..++ ||+|++|++ ...+...++.+ .++
T Consensus 78 ~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~-----~~~~~fD~I~~~~~~~~~~~~~~l~~~~~~~~ 152 (201)
T 2ift_A 78 KVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQP-----QNQPHFDVVFLDPPFHFNLAEQAISLLCENNW 152 (201)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSC-----CSSCCEEEEEECCCSSSCHHHHHHHHHHHTTC
T ss_pred EEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhh-----ccCCCCCEEEECCCCCCccHHHHHHHHHhcCc
Confidence 4899999999999999999999984 58999999998875432 1467 999999988 33456677777 567
Q ss_pred ccCCeEEEEeccc
Q 032390 75 LKVGGIAVYDNTL 87 (142)
Q Consensus 75 L~~gG~iv~dn~~ 87 (142)
|+|||.+++....
T Consensus 153 LkpgG~l~i~~~~ 165 (201)
T 2ift_A 153 LKPNALIYVETEK 165 (201)
T ss_dssp EEEEEEEEEEEES
T ss_pred cCCCcEEEEEECC
Confidence 9999999886544
No 35
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.18 E-value=8.4e-11 Score=97.67 Aligned_cols=81 Identities=22% Similarity=0.408 Sum_probs=70.6
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCC-CcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC--------------cCcH
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVD-HKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK--------------DNYC 65 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~-~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~--------------~~~~ 65 (142)
+|+++|+|+.+++.|++|++.+|+. ++++++++|+.++++.. .++||+|++|++. ..|.
T Consensus 564 ~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~------~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~ 637 (703)
T 3v97_A 564 STTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREA------NEQFDLIFIDPPTFSNSKRMEDAFDVQRDHL 637 (703)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHC------CCCEEEEEECCCSBC-------CCBHHHHHH
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhc------CCCccEEEECCccccCCccchhHHHHHHHHH
Confidence 3899999999999999999999997 68999999999988763 5789999999974 2366
Q ss_pred HHHHHHHhcccCCeEEEEeccc
Q 032390 66 NYHERLMKLLKVGGIAVYDNTL 87 (142)
Q Consensus 66 ~~~~~~~~~L~~gG~iv~dn~~ 87 (142)
.++..+.++|+|||++++.+..
T Consensus 638 ~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 638 ALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp HHHHHHHHHEEEEEEEEEEECC
T ss_pred HHHHHHHHhcCCCcEEEEEECC
Confidence 7788889999999999987665
No 36
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.18 E-value=1.3e-10 Score=90.46 Aligned_cols=83 Identities=19% Similarity=0.338 Sum_probs=70.9
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCC-CCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC------------cCcHHH
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGV-DHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK------------DNYCNY 67 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~-~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~------------~~~~~~ 67 (142)
+|+++|+++.+++.|++|++.+|+ .++++++.+|+.++++.+.. ..++||+|++|++. ..+..+
T Consensus 245 ~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~---~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~ 321 (396)
T 3c0k_A 245 QVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRD---RGEKFDVIVMDPPKFVENKSQLMGACRGYKDI 321 (396)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHH---TTCCEEEEEECCSSTTTCSSSSSCCCTHHHHH
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHh---cCCCCCEEEECCCCCCCChhHHHHHHHHHHHH
Confidence 489999999999999999999998 66899999999998876532 14689999999976 457788
Q ss_pred HHHHHhcccCCeEEEEecc
Q 032390 68 HERLMKLLKVGGIAVYDNT 86 (142)
Q Consensus 68 ~~~~~~~L~~gG~iv~dn~ 86 (142)
+..+.++|+|||++++...
T Consensus 322 l~~~~~~LkpgG~l~~~~~ 340 (396)
T 3c0k_A 322 NMLAIQLLNEGGILLTFSC 340 (396)
T ss_dssp HHHHHHTEEEEEEEEEEEC
T ss_pred HHHHHHhcCCCcEEEEEeC
Confidence 8899999999999988644
No 37
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.17 E-value=8.8e-11 Score=83.34 Aligned_cols=80 Identities=16% Similarity=0.159 Sum_probs=65.6
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCC--CcCcHHHHHHHHh--ccc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDAD--KDNYCNYHERLMK--LLK 76 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~--~~~~~~~~~~~~~--~L~ 76 (142)
+|+++|+|+++++.|+++++..++ ++++++++|+.++++.. .++||+|++|++ ...+...++.+.+ +|+
T Consensus 79 ~V~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~D~~~~~~~~------~~~fD~V~~~~p~~~~~~~~~l~~l~~~~~L~ 151 (202)
T 2fpo_A 79 GATLIEMDRAVSQQLIKNLATLKA-GNARVVNSNAMSFLAQK------GTPHNIVFVDPPFRRGLLEETINLLEDNGWLA 151 (202)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTC-CSEEEECSCHHHHHSSC------CCCEEEEEECCSSSTTTHHHHHHHHHHTTCEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCC-CcEEEEECCHHHHHhhc------CCCCCEEEECCCCCCCcHHHHHHHHHhcCccC
Confidence 489999999999999999999988 58999999998876431 468999999987 3345667777765 599
Q ss_pred CCeEEEEeccc
Q 032390 77 VGGIAVYDNTL 87 (142)
Q Consensus 77 ~gG~iv~dn~~ 87 (142)
|||++++....
T Consensus 152 pgG~l~i~~~~ 162 (202)
T 2fpo_A 152 DEALIYVESEV 162 (202)
T ss_dssp EEEEEEEEEEG
T ss_pred CCcEEEEEECC
Confidence 99999886443
No 38
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.17 E-value=2e-10 Score=79.58 Aligned_cols=84 Identities=17% Similarity=0.193 Sum_probs=68.0
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC--cCcHHHHHHH--Hhccc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK--DNYCNYHERL--MKLLK 76 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~--~~~~~~~~~~--~~~L~ 76 (142)
+|+++|+++.+++.|+++++..++.++++++++|+.+.++.+.. ..++||+|++|++. ......++.+ .++|+
T Consensus 69 ~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---~~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~ 145 (187)
T 2fhp_A 69 KSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYE---EKLQFDLVLLDPPYAKQEIVSQLEKMLERQLLT 145 (187)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHH---TTCCEEEEEECCCGGGCCHHHHHHHHHHTTCEE
T ss_pred EEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHh---cCCCCCEEEECCCCCchhHHHHHHHHHHhcccC
Confidence 48999999999999999999999877899999999987664421 14689999999872 3456677777 67899
Q ss_pred CCeEEEEeccc
Q 032390 77 VGGIAVYDNTL 87 (142)
Q Consensus 77 ~gG~iv~dn~~ 87 (142)
|||.+++....
T Consensus 146 ~gG~l~~~~~~ 156 (187)
T 2fhp_A 146 NEAVIVCETDK 156 (187)
T ss_dssp EEEEEEEEEET
T ss_pred CCCEEEEEeCC
Confidence 99999886443
No 39
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.17 E-value=1.6e-10 Score=89.56 Aligned_cols=82 Identities=26% Similarity=0.394 Sum_probs=69.8
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC------------cCcHHHH
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK------------DNYCNYH 68 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~------------~~~~~~~ 68 (142)
+|+++|+++.+++.|++|++.+|+.+ ++++.+|+.++++.+.. .+++||+|++|++. ..+..++
T Consensus 233 ~v~~vD~s~~~~~~a~~n~~~n~~~~-~~~~~~d~~~~~~~~~~---~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l 308 (382)
T 1wxx_A 233 EVVAVDSSAEALRRAEENARLNGLGN-VRVLEANAFDLLRRLEK---EGERFDLVVLDPPAFAKGKKDVERAYRAYKEVN 308 (382)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCTT-EEEEESCHHHHHHHHHH---TTCCEEEEEECCCCSCCSTTSHHHHHHHHHHHH
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCC-ceEEECCHHHHHHHHHh---cCCCeeEEEECCCCCCCChhHHHHHHHHHHHHH
Confidence 48999999999999999999999865 99999999998876532 14689999999975 3467788
Q ss_pred HHHHhcccCCeEEEEecc
Q 032390 69 ERLMKLLKVGGIAVYDNT 86 (142)
Q Consensus 69 ~~~~~~L~~gG~iv~dn~ 86 (142)
..+.++|+|||.+++...
T Consensus 309 ~~~~~~LkpgG~l~~~~~ 326 (382)
T 1wxx_A 309 LRAIKLLKEGGILATASC 326 (382)
T ss_dssp HHHHHTEEEEEEEEEEEC
T ss_pred HHHHHhcCCCCEEEEEEC
Confidence 889999999999988644
No 40
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.15 E-value=1e-10 Score=91.20 Aligned_cols=77 Identities=22% Similarity=0.182 Sum_probs=67.3
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCc-EEEEEccHHHHHH-HHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHK-INFIESEALSVLD-QLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVG 78 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~-v~~~~~da~~~l~-~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~g 78 (142)
+|+++|+++++++.+++|++.+|+.++ ++++.+|+.+++. .. .++||+|++||. ....++++.+.++|++|
T Consensus 79 ~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~------~~~fD~V~lDP~-g~~~~~l~~a~~~Lk~g 151 (392)
T 3axs_A 79 KAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEW------GFGFDYVDLDPF-GTPVPFIESVALSMKRG 151 (392)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCC------SSCEEEEEECCS-SCCHHHHHHHHHHEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhh------CCCCcEEEECCC-cCHHHHHHHHHHHhCCC
Confidence 489999999999999999999999877 9999999999886 54 457999999993 33567899999999999
Q ss_pred eEEEEe
Q 032390 79 GIAVYD 84 (142)
Q Consensus 79 G~iv~d 84 (142)
|+|++.
T Consensus 152 Gll~~t 157 (392)
T 3axs_A 152 GILSLT 157 (392)
T ss_dssp EEEEEE
T ss_pred CEEEEE
Confidence 988774
No 41
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.15 E-value=1.5e-10 Score=88.05 Aligned_cols=79 Identities=22% Similarity=0.397 Sum_probs=65.0
Q ss_pred CEEEEeCChhHHHHHHHHHHH--cCC-CCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc------Cc-HHHHHH
Q 032390 1 MITAIDVNRETYEIGLPIIKK--AGV-DHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD------NY-CNYHER 70 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~--~~~-~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~------~~-~~~~~~ 70 (142)
+|+++|+|+++++.|++++.. .++ .++++++.+|+.++++.. +++||+|++|+..+ .+ .++++.
T Consensus 142 ~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~------~~~fDvIi~d~~~p~~~~~~l~~~~~l~~ 215 (321)
T 2pt6_A 142 NIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENV------TNTYDVIIVDSSDPIGPAETLFNQNFYEK 215 (321)
T ss_dssp EEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHC------CSCEEEEEEECCCSSSGGGGGSSHHHHHH
T ss_pred EEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhc------CCCceEEEECCcCCCCcchhhhHHHHHHH
Confidence 489999999999999999876 234 468999999999987643 56899999998421 12 788999
Q ss_pred HHhcccCCeEEEEec
Q 032390 71 LMKLLKVGGIAVYDN 85 (142)
Q Consensus 71 ~~~~L~~gG~iv~dn 85 (142)
+.+.|+|||++++..
T Consensus 216 ~~~~LkpgG~lv~~~ 230 (321)
T 2pt6_A 216 IYNALKPNGYCVAQC 230 (321)
T ss_dssp HHHHEEEEEEEEEEE
T ss_pred HHHhcCCCcEEEEEc
Confidence 999999999999864
No 42
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.14 E-value=9e-11 Score=89.09 Aligned_cols=80 Identities=15% Similarity=0.152 Sum_probs=65.5
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC-------cHHHHHHHHh
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN-------YCNYHERLMK 73 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~-------~~~~~~~~~~ 73 (142)
+|++||+|+++++.|++++... ..++++++++|+.+++..+ ..++||+|++|..... ..++++.+.+
T Consensus 115 ~v~~VEidp~vi~~Ar~~~~~~-~~~rv~v~~~Da~~~l~~~-----~~~~fDvIi~D~~~~~~~~~~L~t~efl~~~~r 188 (317)
T 3gjy_A 115 RNTVVELDAELARLSREWFDIP-RAPRVKIRVDDARMVAESF-----TPASRDVIIRDVFAGAITPQNFTTVEFFEHCHR 188 (317)
T ss_dssp EEEEEESCHHHHHHHHHHSCCC-CTTTEEEEESCHHHHHHTC-----CTTCEEEEEECCSTTSCCCGGGSBHHHHHHHHH
T ss_pred EEEEEECCHHHHHHHHHhcccc-CCCceEEEECcHHHHHhhc-----cCCCCCEEEECCCCccccchhhhHHHHHHHHHH
Confidence 4799999999999999988543 2468999999999988754 2468999999974322 2689999999
Q ss_pred cccCCeEEEEecc
Q 032390 74 LLKVGGIAVYDNT 86 (142)
Q Consensus 74 ~L~~gG~iv~dn~ 86 (142)
.|+|||++++...
T Consensus 189 ~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 189 GLAPGGLYVANCG 201 (317)
T ss_dssp HEEEEEEEEEEEE
T ss_pred hcCCCcEEEEEec
Confidence 9999999998643
No 43
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.13 E-value=2.3e-10 Score=85.46 Aligned_cols=79 Identities=20% Similarity=0.365 Sum_probs=64.9
Q ss_pred CEEEEeCChhHHHHHHHHHHHcC--C-CCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc------Cc-HHHHHH
Q 032390 1 MITAIDVNRETYEIGLPIIKKAG--V-DHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD------NY-CNYHER 70 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~--~-~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~------~~-~~~~~~ 70 (142)
+|+++|+|+.+++.|++++...+ + .++++++.+|+.++++.. .++||+|++|+..+ .+ .++++.
T Consensus 104 ~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~------~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~ 177 (283)
T 2i7c_A 104 NIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENV------TNTYDVIIVDSSDPIGPAETLFNQNFYEK 177 (283)
T ss_dssp EEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHC------CSCEEEEEEECCCTTTGGGGGSSHHHHHH
T ss_pred EEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhC------CCCceEEEEcCCCCCCcchhhhHHHHHHH
Confidence 48999999999999999986543 2 468999999999987653 56899999997422 12 688999
Q ss_pred HHhcccCCeEEEEec
Q 032390 71 LMKLLKVGGIAVYDN 85 (142)
Q Consensus 71 ~~~~L~~gG~iv~dn 85 (142)
+.+.|+|||++++..
T Consensus 178 ~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 178 IYNALKPNGYCVAQC 192 (283)
T ss_dssp HHHHEEEEEEEEEEC
T ss_pred HHHhcCCCcEEEEEC
Confidence 999999999999863
No 44
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.13 E-value=3.3e-10 Score=85.77 Aligned_cols=80 Identities=26% Similarity=0.350 Sum_probs=66.4
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC-----------------
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN----------------- 63 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~----------------- 63 (142)
+|+++|+++.+++.+++++++.|+. +++++++|+.++.. . .++||+|++|++...
T Consensus 145 ~v~avD~s~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~~~-~------~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~ 216 (315)
T 1ixk_A 145 VIYAFDVDENRLRETRLNLSRLGVL-NVILFHSSSLHIGE-L------NVEFDKILLDAPCTGSGTIHKNPERKWNRTMD 216 (315)
T ss_dssp EEEEECSCHHHHHHHHHHHHHHTCC-SEEEESSCGGGGGG-G------CCCEEEEEEECCTTSTTTCC--------CCHH
T ss_pred EEEEEcCCHHHHHHHHHHHHHhCCC-eEEEEECChhhccc-c------cccCCEEEEeCCCCCcccccCChhHhhcCCHH
Confidence 3899999999999999999999986 69999999987532 2 468999999987421
Q ss_pred --------cHHHHHHHHhcccCCeEEEEecccc
Q 032390 64 --------YCNYHERLMKLLKVGGIAVYDNTLW 88 (142)
Q Consensus 64 --------~~~~~~~~~~~L~~gG~iv~dn~~~ 88 (142)
...+++.+.++|+|||.+++.++..
T Consensus 217 ~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~ 249 (315)
T 1ixk_A 217 DIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSL 249 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 1467888889999999999987754
No 45
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.13 E-value=1.1e-09 Score=81.14 Aligned_cols=84 Identities=26% Similarity=0.267 Sum_probs=68.7
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc------------------
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD------------------ 62 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~------------------ 62 (142)
+|+++|+++.+++.+++++++.|+. +++++.+|+.++...+.. ..++||+|++|++..
T Consensus 110 ~v~avD~~~~~l~~~~~~~~~~g~~-~v~~~~~D~~~~~~~~~~---~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~ 185 (274)
T 3ajd_A 110 TIVAVEISKTRTKALKSNINRMGVL-NTIIINADMRKYKDYLLK---NEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKY 185 (274)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCHHHHHHHHHH---TTCCEEEEEEEECCC------------HHHHTG
T ss_pred EEEEECCCHHHHHHHHHHHHHhCCC-cEEEEeCChHhcchhhhh---ccccCCEEEEcCCCCCCcccccCCCCCHHHHHH
Confidence 4899999999999999999999986 799999999887543210 146899999997653
Q ss_pred ---CcHHHHHHHHhcccCCeEEEEecccc
Q 032390 63 ---NYCNYHERLMKLLKVGGIAVYDNTLW 88 (142)
Q Consensus 63 ---~~~~~~~~~~~~L~~gG~iv~dn~~~ 88 (142)
.+..+++.+.++|+|||.+++..+..
T Consensus 186 ~~~~~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 186 CSLRQKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp GGTCHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEECCC
Confidence 23678888999999999999987654
No 46
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=99.11 E-value=1.3e-10 Score=87.23 Aligned_cols=120 Identities=13% Similarity=0.161 Sum_probs=82.4
Q ss_pred CEEEEeCChhHHHHHHHHHHHc--C-C-CCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc-------CcHHHHH
Q 032390 1 MITAIDVNRETYEIGLPIIKKA--G-V-DHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD-------NYCNYHE 69 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~--~-~-~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~-------~~~~~~~ 69 (142)
+|+.||+|+++++.|++++... + + ++|++++.+|+.+++... .++||+|++|...+ .-.++++
T Consensus 109 ~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~------~~~yDvIi~D~~dp~~~~~~L~t~eFy~ 182 (294)
T 3o4f_A 109 SITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQT------SQTFDVIISDCTDPIGPGESLFTSAFYE 182 (294)
T ss_dssp EEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCS------SCCEEEEEESCCCCCCTTCCSSCCHHHH
T ss_pred eEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhc------cccCCEEEEeCCCcCCCchhhcCHHHHH
Confidence 4799999999999999998653 2 2 479999999999998643 57899999997532 1357899
Q ss_pred HHHhcccCCeEEEEecccccccccCCCCCCCCCCCcchHHHHHHHHHHhhcCCCeeEEeeecC----ceeEEEE
Q 032390 70 RLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNRSLADDPRVQLSHVALG----DGITICR 139 (142)
Q Consensus 70 ~~~~~L~~gG~iv~dn~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~g----dG~~i~~ 139 (142)
.+.+.|+|||++++..-. ..... + ....+.+-++.++..-.+..+.+|.. .|+.++-
T Consensus 183 ~~~~~L~p~Gv~v~q~~s----p~~~~--------~-~~~~~~~~l~~~F~~v~~~~~~vPty~~g~w~f~~as 243 (294)
T 3o4f_A 183 GCKRCLNPGGIFVAQNGV----CFLQQ--------E-EAIDSHRKLSHYFSDVGFYQAAIPTYYGGIMTFAWAT 243 (294)
T ss_dssp HHHHTEEEEEEEEEEEEE----SSSCC--------H-HHHHHHHHHHHHCSEEEEEEECCTTSSSSCEEEEEEE
T ss_pred HHHHHhCCCCEEEEecCC----cccCh--------H-HHHHHHHHHHhhCCceeeeeeeeccCCCcceeheeEE
Confidence 999999999999986322 11111 1 22233333344555555555666742 4666654
No 47
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.11 E-value=7.9e-10 Score=78.58 Aligned_cols=78 Identities=15% Similarity=0.147 Sum_probs=66.4
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|+++|+++++++.|+++++..|+.++++++.+|+.+.++. .+.||+||+++.. ... +++.+.+.|+|||.
T Consensus 79 ~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~-------~~~~D~v~~~~~~-~~~-~l~~~~~~LkpgG~ 149 (204)
T 3njr_A 79 RAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALAD-------LPLPEAVFIGGGG-SQA-LYDRLWEWLAPGTR 149 (204)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTT-------SCCCSEEEECSCC-CHH-HHHHHHHHSCTTCE
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhccc-------CCCCCEEEECCcc-cHH-HHHHHHHhcCCCcE
Confidence 48999999999999999999999976899999999885432 3579999999854 344 89999999999999
Q ss_pred EEEeccc
Q 032390 81 AVYDNTL 87 (142)
Q Consensus 81 iv~dn~~ 87 (142)
+++....
T Consensus 150 lv~~~~~ 156 (204)
T 3njr_A 150 IVANAVT 156 (204)
T ss_dssp EEEEECS
T ss_pred EEEEecC
Confidence 9987554
No 48
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.11 E-value=4.7e-10 Score=87.46 Aligned_cols=78 Identities=21% Similarity=0.278 Sum_probs=65.3
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC------------cCcHHHHH
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK------------DNYCNYHE 69 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~------------~~~~~~~~ 69 (142)
|+++|+|+.+++.|++|++.+|+.. ++.++|+.++++.+ .+.||+|++|++. ..|..+++
T Consensus 239 V~avDis~~al~~a~~n~~~ng~~~--~~~~~D~~~~l~~~------~~~fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~ 310 (393)
T 4dmg_A 239 ALAVDKDLEALGVLDQAALRLGLRV--DIRHGEALPTLRGL------EGPFHHVLLDPPTLVKRPEELPAMKRHLVDLVR 310 (393)
T ss_dssp EEEEESCHHHHHHHHHHHHHHTCCC--EEEESCHHHHHHTC------CCCEEEEEECCCCCCSSGGGHHHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHHHHhCCCC--cEEEccHHHHHHHh------cCCCCEEEECCCcCCCCHHHHHHHHHHHHHHHH
Confidence 7999999999999999999999864 56699999988754 3349999999985 34678888
Q ss_pred HHHhcccCCeEEEEeccc
Q 032390 70 RLMKLLKVGGIAVYDNTL 87 (142)
Q Consensus 70 ~~~~~L~~gG~iv~dn~~ 87 (142)
.+.++|+|||.+++-.+.
T Consensus 311 ~a~~~LkpGG~Lv~~s~s 328 (393)
T 4dmg_A 311 EALRLLAEEGFLWLSSCS 328 (393)
T ss_dssp HHHHTEEEEEEEEEEECC
T ss_pred HHHHhcCCCCEEEEEECC
Confidence 899999999999865443
No 49
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.11 E-value=9.4e-10 Score=86.45 Aligned_cols=117 Identities=18% Similarity=0.240 Sum_probs=85.8
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC-----------------
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN----------------- 63 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~----------------- 63 (142)
+|+++|+++.+++.+++++++.|+. ++++.+|+.+..+.+ .+++||+|++|+++..
T Consensus 272 ~v~a~D~~~~~l~~~~~~~~~~g~~--~~~~~~D~~~~~~~~-----~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~ 344 (429)
T 1sqg_A 272 QVVAVDIDEQRLSRVYDNLKRLGMK--ATVKQGDGRYPSQWC-----GEQQFDRILLDAPCSATGVIRRHPDIKWLRRDR 344 (429)
T ss_dssp EEEEEESSTTTHHHHHHHHHHTTCC--CEEEECCTTCTHHHH-----TTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTT
T ss_pred EEEEECCCHHHHHHHHHHHHHcCCC--eEEEeCchhhchhhc-----ccCCCCEEEEeCCCCcccccCCCcchhhcCCHH
Confidence 4899999999999999999999873 799999998764434 1468999999987532
Q ss_pred --------cHHHHHHHHhcccCCeEEEEecccccccccCCCCCCCCCCCcchHHHHHHHHHHhhcCCCeeE---------
Q 032390 64 --------YCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNRSLADDPRVQL--------- 126 (142)
Q Consensus 64 --------~~~~~~~~~~~L~~gG~iv~dn~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--------- 126 (142)
+..+++.+.++|+|||.+++.++.+... +....+..|++ .++++..
T Consensus 345 ~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~~--------------ene~~v~~~l~---~~~~~~~~~~~~~~~~ 407 (429)
T 1sqg_A 345 DIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPE--------------ENSLQIKAFLQ---RTADAELCETGTPEQP 407 (429)
T ss_dssp HHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCGG--------------GTHHHHHHHHH---HCTTCEECSSBCSSSB
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCChh--------------hHHHHHHHHHH---hCCCCEEeCCCCCCCC
Confidence 1367888889999999999987765220 02334666654 4555432
Q ss_pred --Eeee---cCceeEEEEEe
Q 032390 127 --SHVA---LGDGITICRRI 141 (142)
Q Consensus 127 --~~lp---~gdG~~i~~~~ 141 (142)
.++| -+||+.+|+-+
T Consensus 408 ~~~~~P~~~~~dGff~a~l~ 427 (429)
T 1sqg_A 408 GKQNLPGAEEGDGFFYAKLI 427 (429)
T ss_dssp SEEECCCTTSCCSEEEEEEE
T ss_pred eEEECCCCCCCCceEEEEEE
Confidence 4566 35999998653
No 50
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.09 E-value=2.3e-10 Score=80.77 Aligned_cols=79 Identities=19% Similarity=0.162 Sum_probs=68.6
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|+++|+++++++.|+++++..++ ++++++.+|+.+.++. .+.||+|+++.....+..+++.+.+.|+|||.
T Consensus 66 ~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~-------~~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~ 137 (204)
T 3e05_A 66 RIFALERNPQYLGFIRDNLKKFVA-RNVTLVEAFAPEGLDD-------LPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGV 137 (204)
T ss_dssp EEEEEECCHHHHHHHHHHHHHHTC-TTEEEEECCTTTTCTT-------SCCCSEEEESCCTTCHHHHHHHHHHHCCTTCE
T ss_pred EEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeCChhhhhhc-------CCCCCEEEECCCCcCHHHHHHHHHHhcCCCeE
Confidence 489999999999999999999998 6899999999765432 36799999998766788999999999999999
Q ss_pred EEEeccc
Q 032390 81 AVYDNTL 87 (142)
Q Consensus 81 iv~dn~~ 87 (142)
+++....
T Consensus 138 l~~~~~~ 144 (204)
T 3e05_A 138 IVLNAVT 144 (204)
T ss_dssp EEEEECB
T ss_pred EEEEecc
Confidence 9986544
No 51
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.09 E-value=1.6e-09 Score=78.54 Aligned_cols=78 Identities=15% Similarity=0.104 Sum_probs=64.7
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|+++|+++++++.|+++++..|+. +++++++|+.++..... ..++||+|++++. ..+..+++.+.++|+|||.
T Consensus 96 ~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~----~~~~fD~V~~~~~-~~~~~~l~~~~~~LkpgG~ 169 (240)
T 1xdz_A 96 HVTIVDSLNKRITFLEKLSEALQLE-NTTFCHDRAETFGQRKD----VRESYDIVTARAV-ARLSVLSELCLPLVKKNGL 169 (240)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHTCS-SEEEEESCHHHHTTCTT----TTTCEEEEEEECC-SCHHHHHHHHGGGEEEEEE
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCC-CEEEEeccHHHhccccc----ccCCccEEEEecc-CCHHHHHHHHHHhcCCCCE
Confidence 4899999999999999999999986 59999999987531000 1368999999884 4678899999999999999
Q ss_pred EEEe
Q 032390 81 AVYD 84 (142)
Q Consensus 81 iv~d 84 (142)
+++.
T Consensus 170 l~~~ 173 (240)
T 1xdz_A 170 FVAL 173 (240)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9874
No 52
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.09 E-value=2e-10 Score=84.29 Aligned_cols=78 Identities=15% Similarity=0.206 Sum_probs=65.8
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc------------------
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD------------------ 62 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~------------------ 62 (142)
+|+++|+++.+++.|++|++..++.++++++++|+.++...+ ..++||+|+++++.-
T Consensus 74 ~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~-----~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~ 148 (259)
T 3lpm_A 74 KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLI-----PKERADIVTCNPPYFATPDTSLKNTNEHFRIAR 148 (259)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTS-----CTTCEEEEEECCCC-------------------
T ss_pred cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhh-----ccCCccEEEECCCCCCCccccCCCCchHHHhhh
Confidence 489999999999999999999999889999999998875433 247899999987631
Q ss_pred -----CcHHHHHHHHhcccCCeEEEE
Q 032390 63 -----NYCNYHERLMKLLKVGGIAVY 83 (142)
Q Consensus 63 -----~~~~~~~~~~~~L~~gG~iv~ 83 (142)
.+..+++.+.++|+|||.+++
T Consensus 149 ~~~~~~~~~~l~~~~~~LkpgG~l~~ 174 (259)
T 3lpm_A 149 HEVMCTLEDTIRVAASLLKQGGKANF 174 (259)
T ss_dssp ----HHHHHHHHHHHHHEEEEEEEEE
T ss_pred ccccCCHHHHHHHHHHHccCCcEEEE
Confidence 134688889999999999988
No 53
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.07 E-value=9e-10 Score=75.08 Aligned_cols=80 Identities=14% Similarity=0.244 Sum_probs=65.9
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC-cCcHHHHHHHH--hcccCC
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK-DNYCNYHERLM--KLLKVG 78 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~-~~~~~~~~~~~--~~L~~g 78 (142)
|+++|+|+++++.|+++++..++ +++++++|+.+.++.... ..++||+|+++++. ......++.+. +.|+||
T Consensus 66 v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~---~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~L~~g 140 (171)
T 1ws6_A 66 AVLVEKDPEAVRLLKENVRRTGL--GARVVALPVEVFLPEAKA---QGERFTVAFMAPPYAMDLAALFGELLASGLVEAG 140 (171)
T ss_dssp EEEECCCHHHHHHHHHHHHHHTC--CCEEECSCHHHHHHHHHH---TTCCEEEEEECCCTTSCTTHHHHHHHHHTCEEEE
T ss_pred EEEEeCCHHHHHHHHHHHHHcCC--ceEEEeccHHHHHHhhhc---cCCceEEEEECCCCchhHHHHHHHHHhhcccCCC
Confidence 78999999999999999999887 799999999987765531 13479999999864 45567777777 899999
Q ss_pred eEEEEecc
Q 032390 79 GIAVYDNT 86 (142)
Q Consensus 79 G~iv~dn~ 86 (142)
|.+++...
T Consensus 141 G~~~~~~~ 148 (171)
T 1ws6_A 141 GLYVLQHP 148 (171)
T ss_dssp EEEEEEEE
T ss_pred cEEEEEeC
Confidence 99988644
No 54
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.07 E-value=3.2e-10 Score=84.28 Aligned_cols=79 Identities=16% Similarity=0.189 Sum_probs=68.1
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|+++|+|+.+++.|++|++.+++.++++++++|+.++.. .++||+|++|++.. ...+++.+.+.|+|||.
T Consensus 150 ~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~--------~~~fD~Vi~~~p~~-~~~~l~~~~~~LkpgG~ 220 (278)
T 2frn_A 150 KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG--------ENIADRILMGYVVR-THEFIPKALSIAKDGAI 220 (278)
T ss_dssp EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC--------CSCEEEEEECCCSS-GGGGHHHHHHHEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc--------cCCccEEEECCchh-HHHHHHHHHHHCCCCeE
Confidence 3899999999999999999999998889999999987642 46899999998843 46788899999999999
Q ss_pred EEEecccc
Q 032390 81 AVYDNTLW 88 (142)
Q Consensus 81 iv~dn~~~ 88 (142)
+++.....
T Consensus 221 l~~~~~~~ 228 (278)
T 2frn_A 221 IHYHNTVP 228 (278)
T ss_dssp EEEEEEEE
T ss_pred EEEEEeec
Confidence 99876553
No 55
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.07 E-value=1.6e-10 Score=83.92 Aligned_cols=84 Identities=21% Similarity=0.208 Sum_probs=68.6
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc--------CcHHHHHHHH
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD--------NYCNYHERLM 72 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~--------~~~~~~~~~~ 72 (142)
++++||+||++++.|+++.+..+ .+++++.+++.+.+..+ +.++||.|+.|+... ....+++.+.
T Consensus 85 ~v~~id~~~~~~~~a~~~~~~~~--~~~~~~~~~a~~~~~~~-----~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~ 157 (236)
T 3orh_A 85 EHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAPTL-----PDGHFDGILYDTYPLSEETWHTHQFNFIKNHAF 157 (236)
T ss_dssp EEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGGGS-----CTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHH
T ss_pred EEEEEeCCHHHHHHHHHHHhhCC--CceEEEeehHHhhcccc-----cccCCceEEEeeeecccchhhhcchhhhhhhhh
Confidence 37899999999999999988776 46999999999887665 367899999997422 2456788899
Q ss_pred hcccCCeEEEEeccccccc
Q 032390 73 KLLKVGGIAVYDNTLWGGT 91 (142)
Q Consensus 73 ~~L~~gG~iv~dn~~~~g~ 91 (142)
++|||||++++.|....+.
T Consensus 158 rvLkPGG~l~f~~~~~~~~ 176 (236)
T 3orh_A 158 RLLKPGGVLTYCNLTSWGE 176 (236)
T ss_dssp HHEEEEEEEEECCHHHHHH
T ss_pred heeCCCCEEEEEecCCchh
Confidence 9999999999988766554
No 56
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=99.06 E-value=7.9e-10 Score=81.59 Aligned_cols=102 Identities=13% Similarity=0.052 Sum_probs=73.5
Q ss_pred HHHcCC-CCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC-cCcHHHHHHHHhcccCCeEEEEecccccccccCCC
Q 032390 19 IKKAGV-DHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK-DNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPE 96 (142)
Q Consensus 19 ~~~~~~-~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~-~~~~~~~~~~~~~L~~gG~iv~dn~~~~g~~~~~~ 96 (142)
.+..|. .++|+++.|++.+.++.+.+. .+.++||+|++|+++ ..+..+++.+.++|+|||+|++||..+.+
T Consensus 150 ~~~~g~~~~~i~li~G~~~dTL~~~l~~-~~~~~~dlv~ID~D~Y~~t~~~le~~~p~l~~GGvIv~DD~~~~~------ 222 (257)
T 3tos_A 150 SDFFGHVTQRSVLVEGDVRETVPRYLAE-NPQTVIALAYFDLDLYEPTKAVLEAIRPYLTKGSIVAFDELDNPK------ 222 (257)
T ss_dssp TSTTTTSCCSEEEEESCHHHHHHHHHHH-CTTCCEEEEEECCCCHHHHHHHHHHHGGGEEEEEEEEESSTTCTT------
T ss_pred hhhcCCCCCcEEEEEecHHHHHHHHHHh-CCCCceEEEEEcCcccchHHHHHHHHHHHhCCCcEEEEcCCCCCC------
Confidence 345666 489999999999999886321 123579999999986 34566799999999999999999974311
Q ss_pred CCCCCCCCcchHHHHHHHHHHhhcCCCeeEEeeecCceeEEE
Q 032390 97 EQVPDHFRGSSRQAILDLNRSLADDPRVQLSHVALGDGITIC 138 (142)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~gdG~~i~ 138 (142)
+ .++++.++......+.....+|++.+....
T Consensus 223 --w---------~G~~~A~~ef~~~~~~~i~~~p~~~~~~y~ 253 (257)
T 3tos_A 223 --W---------PGENIAMRKVLGLDHAPLRLLPGRPAPAYL 253 (257)
T ss_dssp --C---------THHHHHHHHHTCTTSSCCEECTTCSCCEEE
T ss_pred --C---------hHHHHHHHHHHhhCCCeEEEccCCCCCEEE
Confidence 1 134444444556677777788988876543
No 57
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.04 E-value=7.4e-10 Score=87.58 Aligned_cols=82 Identities=21% Similarity=0.253 Sum_probs=66.5
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCc----------------
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNY---------------- 64 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~---------------- 64 (142)
+|+++|+++.+++.++++++++|+. +++++.+|+.+..+.+ .+++||+|++|+++...
T Consensus 286 ~v~a~D~s~~~l~~~~~~~~~~g~~-~v~~~~~D~~~~~~~~-----~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~ 359 (450)
T 2yxl_A 286 KIYAFDVDKMRMKRLKDFVKRMGIK-IVKPLVKDARKAPEII-----GEEVADKVLLDAPCTSSGTIGKNPELRWRLRED 359 (450)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCC-SEEEECSCTTCCSSSS-----CSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTT
T ss_pred EEEEEcCCHHHHHHHHHHHHHcCCC-cEEEEEcChhhcchhh-----ccCCCCEEEEcCCCCCCeeeccChhhhhhCCHH
Confidence 3899999999999999999999985 6999999987642212 12679999999876321
Q ss_pred ---------HHHHHHHHhcccCCeEEEEecccc
Q 032390 65 ---------CNYHERLMKLLKVGGIAVYDNTLW 88 (142)
Q Consensus 65 ---------~~~~~~~~~~L~~gG~iv~dn~~~ 88 (142)
..+++.+.++|+|||.+++.++.+
T Consensus 360 ~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~ 392 (450)
T 2yxl_A 360 KINEMSQLQRELLESAARLVKPGGRLLYTTCSI 392 (450)
T ss_dssp SHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 467888889999999999887764
No 58
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=99.03 E-value=4.7e-10 Score=86.83 Aligned_cols=81 Identities=19% Similarity=0.228 Sum_probs=62.9
Q ss_pred CEEEEeCChhHHHHHHHHHHHcC---C----CCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc-----------
Q 032390 1 MITAIDVNRETYEIGLPIIKKAG---V----DHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD----------- 62 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~---~----~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~----------- 62 (142)
+|+.||+||++++.|++++.... + .++++++.+|+.++++...+. .++||+|++|....
T Consensus 230 ~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~---~~~yDvIIvDl~D~~~s~~p~g~a~ 306 (381)
T 3c6k_A 230 MVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKE---GREFDYVINDLTAVPISTSPEEDST 306 (381)
T ss_dssp EEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHH---TCCEEEEEEECCSSCCCCC----CH
T ss_pred eeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhc---cCceeEEEECCCCCcccCcccCcch
Confidence 47899999999999999874321 1 246999999999999875431 56899999995321
Q ss_pred --CcHHHHHHHHhcccCCeEEEEe
Q 032390 63 --NYCNYHERLMKLLKVGGIAVYD 84 (142)
Q Consensus 63 --~~~~~~~~~~~~L~~gG~iv~d 84 (142)
...++++.+.+.|+|||+++..
T Consensus 307 ~Lft~eFy~~~~~~L~p~GVlv~Q 330 (381)
T 3c6k_A 307 WEFLRLILDLSMKVLKQDGKYFTQ 330 (381)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEe
Confidence 1256788899999999999986
No 59
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.02 E-value=2.5e-10 Score=85.22 Aligned_cols=76 Identities=16% Similarity=0.200 Sum_probs=65.8
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|+++|+||.+++.+++|++.+++.++++++++|+.++.. .+.||.|+++++.. ..++++.+.++|++||+
T Consensus 150 ~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~--------~~~~D~Vi~~~p~~-~~~~l~~a~~~lk~gG~ 220 (278)
T 3k6r_A 150 KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG--------ENIADRILMGYVVR-THEFIPKALSIAKDGAI 220 (278)
T ss_dssp EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC--------CSCEEEEEECCCSS-GGGGHHHHHHHEEEEEE
T ss_pred eEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhcc--------ccCCCEEEECCCCc-HHHHHHHHHHHcCCCCE
Confidence 4899999999999999999999999999999999987632 56899999998754 35678889999999999
Q ss_pred EEEec
Q 032390 81 AVYDN 85 (142)
Q Consensus 81 iv~dn 85 (142)
|.+..
T Consensus 221 ih~~~ 225 (278)
T 3k6r_A 221 IHYHN 225 (278)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 87653
No 60
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.02 E-value=2.3e-09 Score=74.02 Aligned_cols=79 Identities=20% Similarity=0.243 Sum_probs=68.2
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|+++|.++++++.|+++++..+..++++++.+|+.+.++. .++||+|+++........+++.+.+.|+|||.
T Consensus 57 ~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-------~~~~D~v~~~~~~~~~~~~l~~~~~~l~~gG~ 129 (192)
T 1l3i_A 57 RVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCK-------IPDIDIAVVGGSGGELQEILRIIKDKLKPGGR 129 (192)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTT-------SCCEEEEEESCCTTCHHHHHHHHHHTEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhccc-------CCCCCEEEECCchHHHHHHHHHHHHhcCCCcE
Confidence 47999999999999999999999867899999999875432 25899999998766778899999999999999
Q ss_pred EEEecc
Q 032390 81 AVYDNT 86 (142)
Q Consensus 81 iv~dn~ 86 (142)
+++...
T Consensus 130 l~~~~~ 135 (192)
T 1l3i_A 130 IIVTAI 135 (192)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 988643
No 61
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.01 E-value=3.9e-10 Score=79.01 Aligned_cols=78 Identities=10% Similarity=0.160 Sum_probs=64.7
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC------------cCcHHHH
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK------------DNYCNYH 68 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~------------~~~~~~~ 68 (142)
+|+++|+++++++.|+++++..|+.++++++++|+.++.... +++||+|+++.+. ..+..++
T Consensus 49 ~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~------~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l 122 (197)
T 3eey_A 49 RVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYI------DCPVKAVMFNLGYLPSGDHSISTRPETTIQAL 122 (197)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTC------CSCEEEEEEEESBCTTSCTTCBCCHHHHHHHH
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhc------cCCceEEEEcCCcccCcccccccCcccHHHHH
Confidence 479999999999999999999998778999999997753222 5789999998742 1235688
Q ss_pred HHHHhcccCCeEEEEe
Q 032390 69 ERLMKLLKVGGIAVYD 84 (142)
Q Consensus 69 ~~~~~~L~~gG~iv~d 84 (142)
+.+.+.|+|||.+++.
T Consensus 123 ~~~~~~Lk~gG~l~~~ 138 (197)
T 3eey_A 123 SKAMELLVTGGIITVV 138 (197)
T ss_dssp HHHHHHEEEEEEEEEE
T ss_pred HHHHHhCcCCCEEEEE
Confidence 9999999999999875
No 62
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.00 E-value=1.3e-09 Score=77.49 Aligned_cols=126 Identities=13% Similarity=0.192 Sum_probs=85.4
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCC----cEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC-----cCcHHHHHHH
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDH----KINFIESEALSVLDQLLKYSENEGSFDYAFVDADK-----DNYCNYHERL 71 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~----~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~-----~~~~~~~~~~ 71 (142)
+|+++|+++.+++.|++++...++.+ +++++.+|+... +. ..++||+|++.... +....+++.+
T Consensus 55 ~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~-~~------~~~~fD~v~~~~~l~~~~~~~~~~~l~~~ 127 (217)
T 3jwh_A 55 QITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQ-DK------RFHGYDAATVIEVIEHLDLSRLGAFERVL 127 (217)
T ss_dssp EEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSC-CG------GGCSCSEEEEESCGGGCCHHHHHHHHHHH
T ss_pred EEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccc-cc------cCCCcCEEeeHHHHHcCCHHHHHHHHHHH
Confidence 47999999999999999998888764 899999998432 11 13689999986532 2346788999
Q ss_pred HhcccCCeEEEEeccccccccc--CCCCC---CCCCCCcchHHHHHHHHHHhhcCCCeeEEeeecCce
Q 032390 72 MKLLKVGGIAVYDNTLWGGTVA--VPEEQ---VPDHFRGSSRQAILDLNRSLADDPRVQLSHVALGDG 134 (142)
Q Consensus 72 ~~~L~~gG~iv~dn~~~~g~~~--~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~gdG 134 (142)
.+.|+|||++++......+... .+... ..+...- ....++++.+.+....+|+....++|+.
T Consensus 128 ~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~Gf~v~~~~~g~~ 194 (217)
T 3jwh_A 128 FEFAQPKIVIVTTPNIEYNVKFANLPAGKLRHKDHRFEW-TRSQFQNWANKITERFAYNVQFQPIGEA 194 (217)
T ss_dssp HTTTCCSEEEEEEEBHHHHHHTC-----------CCSCB-CHHHHHHHHHHHHHHSSEEEEECCCSCC
T ss_pred HHHcCCCEEEEEccCcccchhhccccccccccccccccc-CHHHHHHHHHHHHHHcCceEEEEecCCc
Confidence 9999999988764332111111 00000 0000001 3456888888888888999999888764
No 63
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.00 E-value=7.7e-10 Score=75.96 Aligned_cols=79 Identities=20% Similarity=0.226 Sum_probs=65.1
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|+++|+++++++.|+++++..++.+++ ++.+|+.+.++.. .++||+|++...... ..+++.+.+.|+|||.
T Consensus 51 ~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~------~~~~D~i~~~~~~~~-~~~l~~~~~~L~~gG~ 122 (178)
T 3hm2_A 51 TAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDV------PDNPDVIFIGGGLTA-PGVFAAAWKRLPVGGR 122 (178)
T ss_dssp EEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGC------CSCCSEEEECC-TTC-TTHHHHHHHTCCTTCE
T ss_pred eEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhcc------CCCCCEEEECCcccH-HHHHHHHHHhcCCCCE
Confidence 4799999999999999999999987789 8889987654421 378999999876543 6789999999999999
Q ss_pred EEEeccc
Q 032390 81 AVYDNTL 87 (142)
Q Consensus 81 iv~dn~~ 87 (142)
+++....
T Consensus 123 l~~~~~~ 129 (178)
T 3hm2_A 123 LVANAVT 129 (178)
T ss_dssp EEEEECS
T ss_pred EEEEeec
Confidence 9986544
No 64
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=98.99 E-value=2.7e-09 Score=76.40 Aligned_cols=76 Identities=21% Similarity=0.315 Sum_probs=61.3
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC-----------------
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN----------------- 63 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~----------------- 63 (142)
+|+++|+|+.+++.|+++++..++ +++++++|+... ..+ .+++||+|+++++...
T Consensus 81 ~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~-~~~-----~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~ 152 (230)
T 3evz_A 81 KVTATEVDEEFFEYARRNIERNNS--NVRLVKSNGGII-KGV-----VEGTFDVIFSAPPYYDKPLGRVLTEREAIGGGK 152 (230)
T ss_dssp EEEEEECCHHHHHHHHHHHHHTTC--CCEEEECSSCSS-TTT-----CCSCEEEEEECCCCC---------------CCS
T ss_pred EEEEEECCHHHHHHHHHHHHHhCC--CcEEEeCCchhh-hhc-----ccCceeEEEECCCCcCCccccccChhhhhccCc
Confidence 489999999999999999999987 799999997432 122 2478999999976311
Q ss_pred -----cHHHHHHHHhcccCCeEEEEe
Q 032390 64 -----YCNYHERLMKLLKVGGIAVYD 84 (142)
Q Consensus 64 -----~~~~~~~~~~~L~~gG~iv~d 84 (142)
+..+++.+.++|+|||.+++-
T Consensus 153 ~~~~~~~~~l~~~~~~LkpgG~l~~~ 178 (230)
T 3evz_A 153 YGEEFSVKLLEEAFDHLNPGGKVALY 178 (230)
T ss_dssp SSCHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred cchHHHHHHHHHHHHHhCCCeEEEEE
Confidence 367888999999999999873
No 65
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.98 E-value=2.1e-09 Score=80.94 Aligned_cols=79 Identities=15% Similarity=0.279 Sum_probs=62.1
Q ss_pred CEEEEeCChhHHHHHHHHHHH---cCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCc-------HHHHHH
Q 032390 1 MITAIDVNRETYEIGLPIIKK---AGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNY-------CNYHER 70 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~---~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~-------~~~~~~ 70 (142)
+|+++|+|+.+++.|++++.. ....++++++.+|+.+++... ..++||+|++|...+.. .++++.
T Consensus 121 ~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~-----~~~~fDvIi~d~~~~~~~~~~l~~~~~l~~ 195 (304)
T 3bwc_A 121 HCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQT-----PDNTYDVVIIDTTDPAGPASKLFGEAFYKD 195 (304)
T ss_dssp EEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSS-----CTTCEEEEEEECC---------CCHHHHHH
T ss_pred EEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhc-----cCCceeEEEECCCCccccchhhhHHHHHHH
Confidence 489999999999999998853 222468999999999886531 15689999999853321 578999
Q ss_pred HHhcccCCeEEEEe
Q 032390 71 LMKLLKVGGIAVYD 84 (142)
Q Consensus 71 ~~~~L~~gG~iv~d 84 (142)
+.+.|+|||++++.
T Consensus 196 ~~~~LkpgG~lv~~ 209 (304)
T 3bwc_A 196 VLRILKPDGICCNQ 209 (304)
T ss_dssp HHHHEEEEEEEEEE
T ss_pred HHHhcCCCcEEEEe
Confidence 99999999999986
No 66
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.98 E-value=2.1e-09 Score=83.38 Aligned_cols=76 Identities=14% Similarity=0.166 Sum_probs=65.5
Q ss_pred CEEEEeCChhHHHHHHHHHHHc---------------CCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcH
Q 032390 1 MITAIDVNRETYEIGLPIIKKA---------------GVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYC 65 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~---------------~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~ 65 (142)
+|+++|+|+++++.|++|++.+ |+.+ ++++++|+.+++... .++||+|++||+. ...
T Consensus 73 ~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~-i~v~~~Da~~~~~~~------~~~fD~I~lDP~~-~~~ 144 (378)
T 2dul_A 73 EVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKT-IVINHDDANRLMAER------HRYFHFIDLDPFG-SPM 144 (378)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSE-EEEEESCHHHHHHHS------TTCEEEEEECCSS-CCH
T ss_pred eEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCc-eEEEcCcHHHHHHhc------cCCCCEEEeCCCC-CHH
Confidence 3899999999999999999998 8754 999999999987653 4579999999863 347
Q ss_pred HHHHHHHhcccCCeEEEEe
Q 032390 66 NYHERLMKLLKVGGIAVYD 84 (142)
Q Consensus 66 ~~~~~~~~~L~~gG~iv~d 84 (142)
++++.+.+.|++||++++.
T Consensus 145 ~~l~~a~~~lk~gG~l~vt 163 (378)
T 2dul_A 145 EFLDTALRSAKRRGILGVT 163 (378)
T ss_dssp HHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCCEEEEE
Confidence 8899999999999988764
No 67
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.97 E-value=1.5e-09 Score=86.52 Aligned_cols=81 Identities=16% Similarity=0.222 Sum_probs=67.2
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC-----------------
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN----------------- 63 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~----------------- 63 (142)
+|+++|+++.+++.+++|++++|+. +++++++|+.++.... .+.||+|++|+++..
T Consensus 144 ~V~avDis~~~l~~~~~n~~r~g~~-nv~~~~~D~~~~~~~~------~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~ 216 (479)
T 2frx_A 144 AILANEFSASRVKVLHANISRCGIS-NVALTHFDGRVFGAAV------PEMFDAILLDAPCSGEGVVRKDPDALKNWSPE 216 (479)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCCSTTHHHHS------TTCEEEEEEECCCCCGGGGGTCTTSSSSCCHH
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCC-cEEEEeCCHHHhhhhc------cccCCEEEECCCcCCcccccCCHHHHhhcCHh
Confidence 3899999999999999999999986 6999999998764322 468999999987531
Q ss_pred --------cHHHHHHHHhcccCCeEEEEecccc
Q 032390 64 --------YCNYHERLMKLLKVGGIAVYDNTLW 88 (142)
Q Consensus 64 --------~~~~~~~~~~~L~~gG~iv~dn~~~ 88 (142)
...+++.+.++|+|||.+++.++.+
T Consensus 217 ~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~ 249 (479)
T 2frx_A 217 SNQEIAATQRELIDSAFHALRPGGTLVYSTCTL 249 (479)
T ss_dssp HHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCEEEEecccC
Confidence 1356778889999999999988765
No 68
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=98.97 E-value=8.2e-10 Score=76.63 Aligned_cols=77 Identities=14% Similarity=0.159 Sum_probs=60.5
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCC-C-----------cCcHHHH
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDAD-K-----------DNYCNYH 68 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~-~-----------~~~~~~~ 68 (142)
+|+++|+|+++++.|+++++..++ ++++++++++..+. .. .+++||+|+++.. . ......+
T Consensus 46 ~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~~~~~l~-~~-----~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l 118 (185)
T 3mti_A 46 KVYAFDVQEQALGKTSQRLSDLGI-ENTELILDGHENLD-HY-----VREPIRAAIFNLGYLPSADKSVITKPHTTLEAI 118 (185)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHTC-CCEEEEESCGGGGG-GT-----CCSCEEEEEEEEC-----------CHHHHHHHH
T ss_pred EEEEEECCHHHHHHHHHHHHHcCC-CcEEEEeCcHHHHH-hh-----ccCCcCEEEEeCCCCCCcchhcccChhhHHHHH
Confidence 489999999999999999999998 68999998876532 22 2568999998831 1 1234567
Q ss_pred HHHHhcccCCeEEEEe
Q 032390 69 ERLMKLLKVGGIAVYD 84 (142)
Q Consensus 69 ~~~~~~L~~gG~iv~d 84 (142)
+.+.+.|+|||.+++-
T Consensus 119 ~~~~~~LkpgG~l~i~ 134 (185)
T 3mti_A 119 EKILDRLEVGGRLAIM 134 (185)
T ss_dssp HHHHHHEEEEEEEEEE
T ss_pred HHHHHhcCCCcEEEEE
Confidence 8888999999999874
No 69
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.96 E-value=3.1e-09 Score=75.56 Aligned_cols=126 Identities=15% Similarity=0.143 Sum_probs=84.3
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCC----cEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc-----CcHHHHHHH
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDH----KINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD-----NYCNYHERL 71 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~----~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~-----~~~~~~~~~ 71 (142)
+|+++|+|+.+++.|++++...++.+ +++++.+|+... +. ..++||+|++..... ....+++.+
T Consensus 55 ~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~-~~------~~~~fD~V~~~~~l~~~~~~~~~~~l~~~ 127 (219)
T 3jwg_A 55 QITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYR-DK------RFSGYDAATVIEVIEHLDENRLQAFEKVL 127 (219)
T ss_dssp EEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSC-CG------GGTTCSEEEEESCGGGCCHHHHHHHHHHH
T ss_pred EEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccccc-cc------ccCCCCEEEEHHHHHhCCHHHHHHHHHHH
Confidence 47999999999999999998887764 899999998432 11 146899999765321 235788899
Q ss_pred HhcccCCeEEEEeccccccccc--CCCCC---CCCCCCcchHHHHHHHHHHhhcCCCeeEEeeecCce
Q 032390 72 MKLLKVGGIAVYDNTLWGGTVA--VPEEQ---VPDHFRGSSRQAILDLNRSLADDPRVQLSHVALGDG 134 (142)
Q Consensus 72 ~~~L~~gG~iv~dn~~~~g~~~--~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~gdG 134 (142)
.+.|+|||+++.......+... .+... ..+...- ....++++.+.+....+|+....++|++
T Consensus 128 ~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~l~~~~Gf~v~~~~~g~~ 194 (219)
T 3jwg_A 128 FEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFEW-TRKEFQTWAVKVAEKYGYSVRFLQIGEI 194 (219)
T ss_dssp HTTTCCSEEEEEEEBGGGGGCCCCT-----GGGCCTTSB-CHHHHHHHHHHHHHHHTEEEEEEEESCC
T ss_pred HHhhCCCEEEEEccchhhhhhhcccCcccccccCceeee-cHHHHHHHHHHHHHHCCcEEEEEecCCc
Confidence 9999999988764332222211 01000 0000001 3456777777787788899988887754
No 70
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.95 E-value=1.2e-10 Score=86.13 Aligned_cols=72 Identities=11% Similarity=0.147 Sum_probs=59.3
Q ss_pred CEEEEeCChhHHHHHHHHHHHc--CC-CCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccC
Q 032390 1 MITAIDVNRETYEIGLPIIKKA--GV-DHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKV 77 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~--~~-~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~ 77 (142)
+|+++|+|+++++.|++++... ++ .++++++.+|+.+++ ++||+|++|+..+ ..+++.+.+.|+|
T Consensus 96 ~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~----------~~fD~Ii~d~~dp--~~~~~~~~~~L~p 163 (262)
T 2cmg_A 96 HIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI----------KKYDLIFCLQEPD--IHRIDGLKRMLKE 163 (262)
T ss_dssp EEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC----------CCEEEEEESSCCC--HHHHHHHHTTEEE
T ss_pred EEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH----------hhCCEEEECCCCh--HHHHHHHHHhcCC
Confidence 4899999999999999987542 22 368999999998753 4799999997643 4589999999999
Q ss_pred CeEEEEe
Q 032390 78 GGIAVYD 84 (142)
Q Consensus 78 gG~iv~d 84 (142)
||++++.
T Consensus 164 gG~lv~~ 170 (262)
T 2cmg_A 164 DGVFISV 170 (262)
T ss_dssp EEEEEEE
T ss_pred CcEEEEE
Confidence 9999985
No 71
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=98.94 E-value=1.5e-09 Score=79.89 Aligned_cols=83 Identities=11% Similarity=0.168 Sum_probs=65.1
Q ss_pred CEEEEeCChhHHHHHHHHHHH---cCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc---------------
Q 032390 1 MITAIDVNRETYEIGLPIIKK---AGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD--------------- 62 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~---~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~--------------- 62 (142)
+|+++|+++++++.|++|+.. .++.++++++++|+.++.+.........++||+|+++++..
T Consensus 62 ~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a 141 (260)
T 2ozv_A 62 EVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEA 141 (260)
T ss_dssp EEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTTCEEEEEECCCC----------------
T ss_pred eEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHH
Confidence 479999999999999999998 88887899999999886542100000246899999997531
Q ss_pred ------CcHHHHHHHHhcccCCeEEEE
Q 032390 63 ------NYCNYHERLMKLLKVGGIAVY 83 (142)
Q Consensus 63 ------~~~~~~~~~~~~L~~gG~iv~ 83 (142)
.+..+++.+.++|+|||.+++
T Consensus 142 ~~~~~~~~~~~l~~~~~~LkpgG~l~~ 168 (260)
T 2ozv_A 142 HAMTEGLFEDWIRTASAIMVSGGQLSL 168 (260)
T ss_dssp -----CCHHHHHHHHHHHEEEEEEEEE
T ss_pred hhcCcCCHHHHHHHHHHHcCCCCEEEE
Confidence 256778889999999999987
No 72
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.94 E-value=1.8e-08 Score=77.72 Aligned_cols=81 Identities=14% Similarity=0.102 Sum_probs=66.7
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCC-----CcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCc------------
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVD-----HKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNY------------ 64 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~-----~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~------------ 64 (142)
|+++|+++..++..++|+++++.. .++++...|+..+-... .+.||.|++|+++..-
T Consensus 175 l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~------~~~fD~VLlDaPCSg~g~g~~r~~~~~~ 248 (359)
T 4fzv_A 175 LAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELE------GDTYDRVLVDVPCTTDRHSLHEEENNIF 248 (359)
T ss_dssp EEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHS------TTCEEEEEEECCCCCHHHHTTCCTTCTT
T ss_pred EEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhc------cccCCEEEECCccCCCCCcccccChhhh
Confidence 789999999999999999998763 47999999998864432 5789999999985430
Q ss_pred ---------------HHHHHHHHhcccCCeEEEEecccc
Q 032390 65 ---------------CNYHERLMKLLKVGGIAVYDNTLW 88 (142)
Q Consensus 65 ---------------~~~~~~~~~~L~~gG~iv~dn~~~ 88 (142)
..+++.+.++|+|||.||+.++..
T Consensus 249 ~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl 287 (359)
T 4fzv_A 249 KRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSL 287 (359)
T ss_dssp SGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred hhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCC
Confidence 245677778999999999998886
No 73
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=98.93 E-value=6.8e-09 Score=76.70 Aligned_cols=75 Identities=16% Similarity=0.242 Sum_probs=62.7
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC-------------------
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK------------------- 61 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~------------------- 61 (142)
+|+++|+|+.+++.|++|++..++. +++++++|+.+.++ .++||+|+++++.
T Consensus 135 ~v~~vD~s~~~l~~a~~n~~~~~~~-~v~~~~~d~~~~~~--------~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~ 205 (276)
T 2b3t_A 135 EIIAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDWFSALA--------GQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLT 205 (276)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCSTTGGGT--------TCCEEEEEECCCCBCTTCHHHHSSGGGSSCST
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCC-ceEEEEcchhhhcc--------cCCccEEEECCCCCCccccccChhhhhcCcHH
Confidence 4899999999999999999999886 79999999977432 4689999998653
Q ss_pred ---------cCcHHHHHHHHhcccCCeEEEEe
Q 032390 62 ---------DNYCNYHERLMKLLKVGGIAVYD 84 (142)
Q Consensus 62 ---------~~~~~~~~~~~~~L~~gG~iv~d 84 (142)
..+..+++.+.+.|+|||.+++.
T Consensus 206 al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~ 237 (276)
T 2b3t_A 206 ALVAADSGMADIVHIIEQSRNALVSGGFLLLE 237 (276)
T ss_dssp TTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred HHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 12456778888999999999986
No 74
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=98.93 E-value=3.5e-09 Score=77.64 Aligned_cols=77 Identities=21% Similarity=0.246 Sum_probs=64.1
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|+++|+++++++.|+++++.+|+. +++++++|+.++..... ..++||+|++.+.. .+..+++.+.++|+|||.
T Consensus 106 ~v~~vD~s~~~~~~a~~~~~~~~l~-~v~~~~~d~~~~~~~~~----~~~~fD~I~s~a~~-~~~~ll~~~~~~LkpgG~ 179 (249)
T 3g89_A 106 ELVLVDATRKKVAFVERAIEVLGLK-GARALWGRAEVLAREAG----HREAYARAVARAVA-PLCVLSELLLPFLEVGGA 179 (249)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHTCS-SEEEEECCHHHHTTSTT----TTTCEEEEEEESSC-CHHHHHHHHGGGEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHhCCC-ceEEEECcHHHhhcccc----cCCCceEEEECCcC-CHHHHHHHHHHHcCCCeE
Confidence 4899999999999999999999996 49999999987632100 13689999998753 468889999999999999
Q ss_pred EEE
Q 032390 81 AVY 83 (142)
Q Consensus 81 iv~ 83 (142)
+++
T Consensus 180 l~~ 182 (249)
T 3g89_A 180 AVA 182 (249)
T ss_dssp EEE
T ss_pred EEE
Confidence 876
No 75
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=98.92 E-value=1.1e-09 Score=79.62 Aligned_cols=74 Identities=20% Similarity=0.248 Sum_probs=64.3
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|+++|+++++++.|+++++..|+.++++++.+|+.+.+ +.++||+|++|.+. ...+++.+.+.|+|||.
T Consensus 120 ~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--------~~~~~D~v~~~~~~--~~~~l~~~~~~L~~gG~ 189 (255)
T 3mb5_A 120 RVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGI--------EEENVDHVILDLPQ--PERVVEHAAKALKPGGF 189 (255)
T ss_dssp EEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCC--------CCCSEEEEEECSSC--GGGGHHHHHHHEEEEEE
T ss_pred EEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhcc--------CCCCcCEEEECCCC--HHHHHHHHHHHcCCCCE
Confidence 479999999999999999999999878999999998642 25679999998764 46678999999999999
Q ss_pred EEEe
Q 032390 81 AVYD 84 (142)
Q Consensus 81 iv~d 84 (142)
+++.
T Consensus 190 l~~~ 193 (255)
T 3mb5_A 190 FVAY 193 (255)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9875
No 76
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.91 E-value=2e-09 Score=79.79 Aligned_cols=76 Identities=18% Similarity=0.252 Sum_probs=65.7
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|+++|+++++++.|++|++.+++. +++++.+|+.++ +. .++||+|++|++. .+..++..+.+.|+|||+
T Consensus 145 ~V~~vD~s~~av~~a~~n~~~n~l~-~~~~~~~d~~~~-~~-------~~~~D~Vi~d~p~-~~~~~l~~~~~~LkpgG~ 214 (272)
T 3a27_A 145 LVYAIEKNPTAYHYLCENIKLNKLN-NVIPILADNRDV-EL-------KDVADRVIMGYVH-KTHKFLDKTFEFLKDRGV 214 (272)
T ss_dssp EEEEEECCHHHHHHHHHHHHHTTCS-SEEEEESCGGGC-CC-------TTCEEEEEECCCS-SGGGGHHHHHHHEEEEEE
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCC-CEEEEECChHHc-Cc-------cCCceEEEECCcc-cHHHHHHHHHHHcCCCCE
Confidence 4899999999999999999999986 589999999876 32 3579999999986 677889999999999999
Q ss_pred EEEecc
Q 032390 81 AVYDNT 86 (142)
Q Consensus 81 iv~dn~ 86 (142)
+++...
T Consensus 215 l~~s~~ 220 (272)
T 3a27_A 215 IHYHET 220 (272)
T ss_dssp EEEEEE
T ss_pred EEEEEc
Confidence 987543
No 77
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=98.89 E-value=2.6e-09 Score=73.85 Aligned_cols=78 Identities=18% Similarity=0.183 Sum_probs=64.5
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCC-cEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc----CcHHHHHHHHhcc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDH-KINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD----NYCNYHERLMKLL 75 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~-~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~----~~~~~~~~~~~~L 75 (142)
+++++|+++.+++.|++++...++.+ +++++.+|+.+.++ .++||+|+++++.. ....+++.+.+.|
T Consensus 76 ~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~--------~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L 147 (194)
T 1dus_A 76 STTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK--------DRKYNKIITNPPIRAGKEVLHRIIEEGKELL 147 (194)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT--------TSCEEEEEECCCSTTCHHHHHHHHHHHHHHE
T ss_pred eEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccc--------cCCceEEEECCCcccchhHHHHHHHHHHHHc
Confidence 47999999999999999999988864 59999999877432 46899999998632 3467888889999
Q ss_pred cCCeEEEEecc
Q 032390 76 KVGGIAVYDNT 86 (142)
Q Consensus 76 ~~gG~iv~dn~ 86 (142)
+|||.+++...
T Consensus 148 ~~gG~l~~~~~ 158 (194)
T 1dus_A 148 KDNGEIWVVIQ 158 (194)
T ss_dssp EEEEEEEEEEE
T ss_pred CCCCEEEEEEC
Confidence 99999988643
No 78
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=98.89 E-value=3.5e-09 Score=78.19 Aligned_cols=77 Identities=16% Similarity=0.147 Sum_probs=62.8
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC-----cCcHHHHHHHHhcc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK-----DNYCNYHERLMKLL 75 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~-----~~~~~~~~~~~~~L 75 (142)
+|+++|+|+.|++.|+++++..+...+|+++++|+.++ +.++||+|++-... .....+++.+.+.|
T Consensus 98 ~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~---------~~~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~L 168 (261)
T 4gek_A 98 KIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDI---------AIENASMVVLNFTLQFLEPSERQALLDKIYQGL 168 (261)
T ss_dssp EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTC---------CCCSEEEEEEESCGGGSCHHHHHHHHHHHHHHE
T ss_pred EEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccc---------cccccccceeeeeeeecCchhHhHHHHHHHHHc
Confidence 48999999999999999999999888999999998763 24679999975432 12346789999999
Q ss_pred cCCeEEEEecc
Q 032390 76 KVGGIAVYDNT 86 (142)
Q Consensus 76 ~~gG~iv~dn~ 86 (142)
+|||.+++.+.
T Consensus 169 kpGG~lii~e~ 179 (261)
T 4gek_A 169 NPGGALVLSEK 179 (261)
T ss_dssp EEEEEEEEEEE
T ss_pred CCCcEEEEEec
Confidence 99999887543
No 79
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=98.88 E-value=9.8e-09 Score=76.59 Aligned_cols=78 Identities=6% Similarity=0.103 Sum_probs=66.4
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC------------cCcHHHH
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK------------DNYCNYH 68 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~------------~~~~~~~ 68 (142)
+|+++|+|+++++.|++++...|+.++++++.+|+.++ +++||+|++.... ..+..++
T Consensus 97 ~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----------~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l 166 (302)
T 3hem_A 97 NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF----------DEPVDRIVSLGAFEHFADGAGDAGFERYDTFF 166 (302)
T ss_dssp EEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC----------CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHH
T ss_pred EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc----------CCCccEEEEcchHHhcCccccccchhHHHHHH
Confidence 48999999999999999999999988999999999764 3689999985421 3357899
Q ss_pred HHHHhcccCCeEEEEecccc
Q 032390 69 ERLMKLLKVGGIAVYDNTLW 88 (142)
Q Consensus 69 ~~~~~~L~~gG~iv~dn~~~ 88 (142)
+.+.+.|+|||.+++.....
T Consensus 167 ~~~~~~LkpgG~l~i~~~~~ 186 (302)
T 3hem_A 167 KKFYNLTPDDGRMLLHTITI 186 (302)
T ss_dssp HHHHHSSCTTCEEEEEEEEC
T ss_pred HHHHHhcCCCcEEEEEEEec
Confidence 99999999999999876654
No 80
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.88 E-value=4.8e-10 Score=81.55 Aligned_cols=75 Identities=17% Similarity=0.277 Sum_probs=61.8
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHH--HHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHh-cccC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV--LDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMK-LLKV 77 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~--l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~-~L~~ 77 (142)
+|++||+++++++.|+ ++.++++++++|+.+. ++.+ ...+||+|++|+....+..++..+.+ .|+|
T Consensus 111 ~V~gvD~s~~~l~~a~------~~~~~v~~~~gD~~~~~~l~~~-----~~~~fD~I~~d~~~~~~~~~l~~~~r~~Lkp 179 (236)
T 2bm8_A 111 QVIGIDRDLSRCQIPA------SDMENITLHQGDCSDLTTFEHL-----REMAHPLIFIDNAHANTFNIMKWAVDHLLEE 179 (236)
T ss_dssp EEEEEESCCTTCCCCG------GGCTTEEEEECCSSCSGGGGGG-----SSSCSSEEEEESSCSSHHHHHHHHHHHTCCT
T ss_pred EEEEEeCChHHHHHHh------ccCCceEEEECcchhHHHHHhh-----ccCCCCEEEECCchHhHHHHHHHHHHhhCCC
Confidence 4899999999999887 2246899999999874 3333 13479999999987788889999996 9999
Q ss_pred CeEEEEecc
Q 032390 78 GGIAVYDNT 86 (142)
Q Consensus 78 gG~iv~dn~ 86 (142)
||.++++++
T Consensus 180 GG~lv~~d~ 188 (236)
T 2bm8_A 180 GDYFIIEDM 188 (236)
T ss_dssp TCEEEECSC
T ss_pred CCEEEEEeC
Confidence 999999875
No 81
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.87 E-value=5.6e-09 Score=79.65 Aligned_cols=76 Identities=24% Similarity=0.231 Sum_probs=65.6
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|+++|+|+.+++.|++|++.+++.++++++++|+.+++ ++||+|++|++.. ...+++.+.++|+|||.
T Consensus 218 ~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~----------~~fD~Vi~dpP~~-~~~~l~~~~~~L~~gG~ 286 (336)
T 2yx1_A 218 KIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD----------VKGNRVIMNLPKF-AHKFIDKALDIVEEGGV 286 (336)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC----------CCEEEEEECCTTT-GGGGHHHHHHHEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc----------CCCcEEEECCcHh-HHHHHHHHHHHcCCCCE
Confidence 489999999999999999999999778999999998753 4799999998743 35788899999999999
Q ss_pred EEEeccc
Q 032390 81 AVYDNTL 87 (142)
Q Consensus 81 iv~dn~~ 87 (142)
+++..+.
T Consensus 287 l~~~~~~ 293 (336)
T 2yx1_A 287 IHYYTIG 293 (336)
T ss_dssp EEEEEEE
T ss_pred EEEEEee
Confidence 8886554
No 82
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=98.87 E-value=4.6e-09 Score=74.72 Aligned_cols=78 Identities=15% Similarity=0.359 Sum_probs=63.9
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc-----------CcHHHHH
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD-----------NYCNYHE 69 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~-----------~~~~~~~ 69 (142)
+++++|+++.+++.|++++...++ ++++++.+|+.++...+ ..++||+|+++.+.+ .+..+++
T Consensus 67 ~v~gvD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~-----~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~l~ 140 (214)
T 1yzh_A 67 NYIGIDIQKSVLSYALDKVLEVGV-PNIKLLWVDGSDLTDYF-----EDGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLD 140 (214)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHCC-SSEEEEECCSSCGGGTS-----CTTCCSEEEEESCCCCCSGGGGGGSTTSHHHHH
T ss_pred CEEEEEcCHHHHHHHHHHHHHcCC-CCEEEEeCCHHHHHhhc-----CCCCCCEEEEECCCCccccchhhhccCCHHHHH
Confidence 379999999999999999999988 58999999998732112 246899999986532 2467999
Q ss_pred HHHhcccCCeEEEEe
Q 032390 70 RLMKLLKVGGIAVYD 84 (142)
Q Consensus 70 ~~~~~L~~gG~iv~d 84 (142)
.+.+.|+|||.+++.
T Consensus 141 ~~~~~LkpgG~l~~~ 155 (214)
T 1yzh_A 141 TFKRILPENGEIHFK 155 (214)
T ss_dssp HHHHHSCTTCEEEEE
T ss_pred HHHHHcCCCcEEEEE
Confidence 999999999999874
No 83
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=98.86 E-value=5e-09 Score=76.03 Aligned_cols=81 Identities=20% Similarity=0.235 Sum_probs=67.6
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc--CcHHHHHHHHhcccCC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD--NYCNYHERLMKLLKVG 78 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~--~~~~~~~~~~~~L~~g 78 (142)
+|+++|+++.+++.|++++...|+.++++++.+|+.++ + + ++++||+|++..... ....+++.+.+.|+||
T Consensus 71 ~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~-~-----~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pg 143 (257)
T 3f4k_A 71 QITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNL-P-F-----QNEELDLIWSEGAIYNIGFERGMNEWSKYLKKG 143 (257)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC-S-S-----CTTCEEEEEEESCSCCCCHHHHHHHHHTTEEEE
T ss_pred eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhC-C-C-----CCCCEEEEEecChHhhcCHHHHHHHHHHHcCCC
Confidence 48999999999999999999999988899999999653 2 1 257899999875322 4678899999999999
Q ss_pred eEEEEecccc
Q 032390 79 GIAVYDNTLW 88 (142)
Q Consensus 79 G~iv~dn~~~ 88 (142)
|.+++....|
T Consensus 144 G~l~~~~~~~ 153 (257)
T 3f4k_A 144 GFIAVSEASW 153 (257)
T ss_dssp EEEEEEEEEE
T ss_pred cEEEEEEeec
Confidence 9999887654
No 84
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.86 E-value=1e-08 Score=78.42 Aligned_cols=76 Identities=16% Similarity=0.209 Sum_probs=64.1
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC-----------cHHHHH
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN-----------YCNYHE 69 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~-----------~~~~~~ 69 (142)
+|+++|+|+.+++.|++|++.+|+. ++++.++|+.++.. ..+.||+|++|++... |..+++
T Consensus 230 ~v~g~Di~~~~i~~a~~n~~~~g~~-~i~~~~~D~~~~~~-------~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~ 301 (354)
T 3tma_A 230 PVYAGDLDEKRLGLAREAALASGLS-WIRFLRADARHLPR-------FFPEVDRILANPPHGLRLGRKEGLFHLYWDFLR 301 (354)
T ss_dssp CEEEEESCHHHHHHHHHHHHHTTCT-TCEEEECCGGGGGG-------TCCCCSEEEECCCSCC----CHHHHHHHHHHHH
T ss_pred eEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeCChhhCcc-------ccCCCCEEEECCCCcCccCCcccHHHHHHHHHH
Confidence 4899999999999999999999997 89999999988532 1456999999987421 467788
Q ss_pred HHHhcccCCeEEEEe
Q 032390 70 RLMKLLKVGGIAVYD 84 (142)
Q Consensus 70 ~~~~~L~~gG~iv~d 84 (142)
.+.+.|+|||.+++-
T Consensus 302 ~~~~~LkpgG~l~i~ 316 (354)
T 3tma_A 302 GALALLPPGGRVALL 316 (354)
T ss_dssp HHHHTSCTTCEEEEE
T ss_pred HHHHhcCCCcEEEEE
Confidence 888999999998873
No 85
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.86 E-value=2.5e-09 Score=82.62 Aligned_cols=78 Identities=14% Similarity=0.158 Sum_probs=62.3
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc--CcHHHHHHHHhcccCC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD--NYCNYHERLMKLLKVG 78 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~--~~~~~~~~~~~~L~~g 78 (142)
+|+++|+|+++++.|++|++..|+. +++++.+|+.+.++.. ..++||+|++|++.. ....+++.+.+.|+||
T Consensus 197 ~v~~vDi~~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~l~~~-----~~~~fD~Vi~~~p~~~~~~~~~l~~~~~~Lkpg 270 (373)
T 2qm3_A 197 RIAVLDIDERLTKFIEKAANEIGYE-DIEIFTFDLRKPLPDY-----ALHKFDTFITDPPETLEAIRAFVGRGIATLKGP 270 (373)
T ss_dssp EEEEECSCHHHHHHHHHHHHHHTCC-CEEEECCCTTSCCCTT-----TSSCBSEEEECCCSSHHHHHHHHHHHHHTBCST
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCC-CEEEEEChhhhhchhh-----ccCCccEEEECCCCchHHHHHHHHHHHHHcccC
Confidence 4899999999999999999999986 8999999998743310 135899999998742 2356788889999999
Q ss_pred e-EEEEe
Q 032390 79 G-IAVYD 84 (142)
Q Consensus 79 G-~iv~d 84 (142)
| ++++.
T Consensus 271 G~~~~~~ 277 (373)
T 2qm3_A 271 RCAGYFG 277 (373)
T ss_dssp TCEEEEE
T ss_pred CeEEEEE
Confidence 9 44554
No 86
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.85 E-value=2.3e-09 Score=75.60 Aligned_cols=77 Identities=16% Similarity=0.221 Sum_probs=65.4
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|+++|+++.+++.|++++...++.+ ++++.+|+.+.. .++||+|+++.....+..+++.+.++|+|||.
T Consensus 85 ~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~---------~~~fD~i~~~~~~~~~~~~l~~~~~~L~~gG~ 154 (205)
T 3grz_A 85 SVLATDISDESMTAAEENAALNGIYD-IALQKTSLLADV---------DGKFDLIVANILAEILLDLIPQLDSHLNEDGQ 154 (205)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCCC-CEEEESSTTTTC---------CSCEEEEEEESCHHHHHHHGGGSGGGEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCc-eEEEeccccccC---------CCCceEEEECCcHHHHHHHHHHHHHhcCCCCE
Confidence 47999999999999999999999865 999999987631 56899999998766667778888899999999
Q ss_pred EEEeccc
Q 032390 81 AVYDNTL 87 (142)
Q Consensus 81 iv~dn~~ 87 (142)
+++....
T Consensus 155 l~~~~~~ 161 (205)
T 3grz_A 155 VIFSGID 161 (205)
T ss_dssp EEEEEEE
T ss_pred EEEEecC
Confidence 9986443
No 87
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=98.85 E-value=1.5e-08 Score=72.86 Aligned_cols=78 Identities=15% Similarity=0.259 Sum_probs=63.9
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEc---CCC-c-C------cHHHHHH
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVD---ADK-D-N------YCNYHER 70 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD---~~~-~-~------~~~~~~~ 70 (142)
|++||+++.+++.|+++++..|+. +++++.+|+.+.++... ++++||.|++. +.. . . ...+++.
T Consensus 61 v~giD~s~~~l~~a~~~~~~~~l~-nv~~~~~Da~~~l~~~~----~~~~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~ 135 (218)
T 3dxy_A 61 FLGIEVHSPGVGACLASAHEEGLS-NLRVMCHDAVEVLHKMI----PDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAEL 135 (218)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTCS-SEEEECSCHHHHHHHHS----CTTCEEEEEEESCCCCCSGGGGGGSSCSHHHHHH
T ss_pred EEEEEecHHHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHc----CCCChheEEEeCCCCccchhhhhhhhhhHHHHHH
Confidence 899999999999999999999986 59999999999877532 26789999985 321 1 1 2358999
Q ss_pred HHhcccCCeEEEEe
Q 032390 71 LMKLLKVGGIAVYD 84 (142)
Q Consensus 71 ~~~~L~~gG~iv~d 84 (142)
+.+.|+|||.+++.
T Consensus 136 ~~r~LkpGG~l~i~ 149 (218)
T 3dxy_A 136 VKSKLQLGGVFHMA 149 (218)
T ss_dssp HHHHEEEEEEEEEE
T ss_pred HHHHcCCCcEEEEE
Confidence 99999999998774
No 88
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.84 E-value=4.6e-09 Score=75.76 Aligned_cols=80 Identities=21% Similarity=0.240 Sum_probs=62.8
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC--------cCcHHHHHHHH
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK--------DNYCNYHERLM 72 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~--------~~~~~~~~~~~ 72 (142)
+|+++|+++.+++.|+++.+..+ .+++++.+|+.+.++.+ .+++||+|++|... .....+++.+.
T Consensus 85 ~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~-----~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~ 157 (236)
T 1zx0_A 85 EHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAPTL-----PDGHFDGILYDTYPLSEETWHTHQFNFIKNHAF 157 (236)
T ss_dssp EEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGGGS-----CTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHH
T ss_pred eEEEEcCCHHHHHHHHHHHHhcC--CCeEEEecCHHHhhccc-----CCCceEEEEECCcccchhhhhhhhHHHHHHHHH
Confidence 47999999999999999888776 57999999998875444 25789999995432 11235688899
Q ss_pred hcccCCeEEEEeccc
Q 032390 73 KLLKVGGIAVYDNTL 87 (142)
Q Consensus 73 ~~L~~gG~iv~dn~~ 87 (142)
++|+|||.+++-+..
T Consensus 158 r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 158 RLLKPGGVLTYCNLT 172 (236)
T ss_dssp HHEEEEEEEEECCHH
T ss_pred HhcCCCeEEEEEecC
Confidence 999999999976554
No 89
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=98.83 E-value=8.8e-09 Score=75.51 Aligned_cols=77 Identities=21% Similarity=0.248 Sum_probs=65.6
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|+++|+|+.+++.|++|++..++. ++++.+|+.+.++ .++||+|+++........+++.+.+.|+|||.
T Consensus 144 ~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~d~~~~~~--------~~~fD~Vv~n~~~~~~~~~l~~~~~~LkpgG~ 213 (254)
T 2nxc_A 144 KALGVDIDPMVLPQAEANAKRNGVR--PRFLEGSLEAALP--------FGPFDLLVANLYAELHAALAPRYREALVPGGR 213 (254)
T ss_dssp EEEEEESCGGGHHHHHHHHHHTTCC--CEEEESCHHHHGG--------GCCEEEEEEECCHHHHHHHHHHHHHHEEEEEE
T ss_pred eEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChhhcCc--------CCCCCEEEECCcHHHHHHHHHHHHHHcCCCCE
Confidence 4899999999999999999998875 9999999987532 46899999987665567788999999999999
Q ss_pred EEEeccc
Q 032390 81 AVYDNTL 87 (142)
Q Consensus 81 iv~dn~~ 87 (142)
+++....
T Consensus 214 lils~~~ 220 (254)
T 2nxc_A 214 ALLTGIL 220 (254)
T ss_dssp EEEEEEE
T ss_pred EEEEeec
Confidence 9986554
No 90
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.82 E-value=1.2e-08 Score=76.09 Aligned_cols=75 Identities=16% Similarity=0.306 Sum_probs=62.8
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCce---eEEEEcCCCcC----------c---
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF---DYAFVDADKDN----------Y--- 64 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~f---D~IfiD~~~~~----------~--- 64 (142)
+|+++|+|+++++.|++|++..++.++++++++|+.+.+ .++| |+|+++++... |
T Consensus 148 ~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~---------~~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~ 218 (284)
T 1nv8_A 148 IVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPF---------KEKFASIEMILSNPPYVKSSAHLPKDVLFEPP 218 (284)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGG---------GGGTTTCCEEEECCCCBCGGGSCTTSCCCSCH
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhc---------ccccCCCCEEEEcCCCCCcccccChhhccCcH
Confidence 489999999999999999999999878999999998743 2368 99999976321 1
Q ss_pred ---------HHHHHHHH-hcccCCeEEEEe
Q 032390 65 ---------CNYHERLM-KLLKVGGIAVYD 84 (142)
Q Consensus 65 ---------~~~~~~~~-~~L~~gG~iv~d 84 (142)
..+++.+. +.|+|||.++++
T Consensus 219 ~al~~~~dgl~~~~~i~~~~l~pgG~l~~e 248 (284)
T 1nv8_A 219 EALFGGEDGLDFYREFFGRYDTSGKIVLME 248 (284)
T ss_dssp HHHBCTTTSCHHHHHHHHHCCCTTCEEEEE
T ss_pred HHhcCCCcHHHHHHHHHHhcCCCCCEEEEE
Confidence 16788899 999999999985
No 91
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=98.82 E-value=1.1e-07 Score=65.14 Aligned_cols=74 Identities=24% Similarity=0.225 Sum_probs=62.9
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+++++|+++.+++.|+++++..++ ++++++.+|+.+.++ .++||+|+++.. .....+++.+.+. |||.
T Consensus 59 ~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~~d~~~~~~--------~~~~D~i~~~~~-~~~~~~l~~~~~~--~gG~ 126 (183)
T 2yxd_A 59 FVYAIDYLDGAIEVTKQNLAKFNI-KNCQIIKGRAEDVLD--------KLEFNKAFIGGT-KNIEKIIEILDKK--KINH 126 (183)
T ss_dssp EEEEEECSHHHHHHHHHHHHHTTC-CSEEEEESCHHHHGG--------GCCCSEEEECSC-SCHHHHHHHHHHT--TCCE
T ss_pred eEEEEeCCHHHHHHHHHHHHHcCC-CcEEEEECCcccccc--------CCCCcEEEECCc-ccHHHHHHHHhhC--CCCE
Confidence 479999999999999999999988 479999999987322 368999999988 6678888888887 9999
Q ss_pred EEEecc
Q 032390 81 AVYDNT 86 (142)
Q Consensus 81 iv~dn~ 86 (142)
+++...
T Consensus 127 l~~~~~ 132 (183)
T 2yxd_A 127 IVANTI 132 (183)
T ss_dssp EEEEES
T ss_pred EEEEec
Confidence 988643
No 92
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.81 E-value=8.8e-09 Score=76.12 Aligned_cols=80 Identities=18% Similarity=0.201 Sum_probs=65.9
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC---cCcHHHHHHHHhcccC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK---DNYCNYHERLMKLLKV 77 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~---~~~~~~~~~~~~~L~~ 77 (142)
+|+++|+++.+++.|++++...|+.++++++.+|+.+..+ + .+++||+|++.... ++...+++.+.+.|+|
T Consensus 92 ~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~-----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkp 165 (285)
T 4htf_A 92 QVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVAS-H-----LETPVDLILFHAVLEWVADPRSVLQTLWSVLRP 165 (285)
T ss_dssp EEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGG-G-----CSSCEEEEEEESCGGGCSCHHHHHHHHHHTEEE
T ss_pred EEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhh-h-----cCCCceEEEECchhhcccCHHHHHHHHHHHcCC
Confidence 4799999999999999999999987899999999987632 2 25789999987642 3457889999999999
Q ss_pred CeEEEEecc
Q 032390 78 GGIAVYDNT 86 (142)
Q Consensus 78 gG~iv~dn~ 86 (142)
||.+++...
T Consensus 166 gG~l~~~~~ 174 (285)
T 4htf_A 166 GGVLSLMFY 174 (285)
T ss_dssp EEEEEEEEE
T ss_pred CeEEEEEEe
Confidence 999987543
No 93
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=98.81 E-value=7.7e-09 Score=75.74 Aligned_cols=81 Identities=15% Similarity=0.221 Sum_probs=67.7
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc--CcHHHHHHHHhcccCC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD--NYCNYHERLMKLLKVG 78 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~--~~~~~~~~~~~~L~~g 78 (142)
+|+++|+++.+++.|+++++..|+.++++++.+|+.++ + + +.++||+|++..... +...+++.+.+.|+||
T Consensus 71 ~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~-~-----~~~~fD~i~~~~~~~~~~~~~~l~~~~~~Lkpg 143 (267)
T 3kkz_A 71 QVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDL-P-F-----RNEELDLIWSEGAIYNIGFERGLNEWRKYLKKG 143 (267)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC-C-C-----CTTCEEEEEESSCGGGTCHHHHHHHHGGGEEEE
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhC-C-C-----CCCCEEEEEEcCCceecCHHHHHHHHHHHcCCC
Confidence 48999999999999999999999988999999999763 1 1 257899999866421 4678899999999999
Q ss_pred eEEEEecccc
Q 032390 79 GIAVYDNTLW 88 (142)
Q Consensus 79 G~iv~dn~~~ 88 (142)
|.+++....+
T Consensus 144 G~l~~~~~~~ 153 (267)
T 3kkz_A 144 GYLAVSECSW 153 (267)
T ss_dssp EEEEEEEEEE
T ss_pred CEEEEEEeee
Confidence 9999887654
No 94
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.80 E-value=5.3e-08 Score=73.61 Aligned_cols=82 Identities=16% Similarity=0.130 Sum_probs=61.5
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCc----------------
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNY---------------- 64 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~---------------- 64 (142)
+|+++|+++++++.+++|++++|+. +++++++|+.++..... ...+||.|++|+++...
T Consensus 129 ~V~a~D~~~~~l~~~~~n~~r~g~~-~v~~~~~D~~~~~~~~~----~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~ 203 (309)
T 2b9e_A 129 KIFAFDLDAKRLASMATLLARAGVS-CCELAEEDFLAVSPSDP----RYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPS 203 (309)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCGGGSCTTCG----GGTTEEEEEECCCCCC-----------------
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCC-eEEEEeCChHhcCcccc----ccCCCCEEEEcCCcCCCCCCccCCChhhhccCC
Confidence 4899999999999999999999985 69999999987532110 01479999999875210
Q ss_pred -----------HHHHHHHHhcccCCeEEEEecccc
Q 032390 65 -----------CNYHERLMKLLKVGGIAVYDNTLW 88 (142)
Q Consensus 65 -----------~~~~~~~~~~L~~gG~iv~dn~~~ 88 (142)
.++++.+.++++ ||.+|+..+.+
T Consensus 204 ~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~ 237 (309)
T 2b9e_A 204 PVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSL 237 (309)
T ss_dssp -CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCC
T ss_pred HHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCC
Confidence 124555666776 99999987765
No 95
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=98.80 E-value=2.5e-08 Score=71.18 Aligned_cols=78 Identities=10% Similarity=0.310 Sum_probs=62.9
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc-----------CcHHHHH
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD-----------NYCNYHE 69 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~-----------~~~~~~~ 69 (142)
+++++|+++++++.|+++++..++. +++++.+|+.++...+ +.+.||.|++..+.+ .+..+++
T Consensus 64 ~v~giD~s~~~l~~a~~~~~~~~~~-nv~~~~~d~~~l~~~~-----~~~~~d~v~~~~~~p~~~~~~~~~rl~~~~~l~ 137 (213)
T 2fca_A 64 NYIGIELFKSVIVTAVQKVKDSEAQ-NVKLLNIDADTLTDVF-----EPGEVKRVYLNFSDPWPKKRHEKRRLTYSHFLK 137 (213)
T ss_dssp EEEEECSCHHHHHHHHHHHHHSCCS-SEEEECCCGGGHHHHC-----CTTSCCEEEEESCCCCCSGGGGGGSTTSHHHHH
T ss_pred CEEEEEechHHHHHHHHHHHHcCCC-CEEEEeCCHHHHHhhc-----CcCCcCEEEEECCCCCcCccccccccCcHHHHH
Confidence 3799999999999999999999884 6999999998843323 256899998853211 1478899
Q ss_pred HHHhcccCCeEEEEe
Q 032390 70 RLMKLLKVGGIAVYD 84 (142)
Q Consensus 70 ~~~~~L~~gG~iv~d 84 (142)
.+.+.|+|||.+++.
T Consensus 138 ~~~~~LkpgG~l~~~ 152 (213)
T 2fca_A 138 KYEEVMGKGGSIHFK 152 (213)
T ss_dssp HHHHHHTTSCEEEEE
T ss_pred HHHHHcCCCCEEEEE
Confidence 999999999999874
No 96
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=98.80 E-value=6.1e-09 Score=73.57 Aligned_cols=73 Identities=16% Similarity=0.181 Sum_probs=60.4
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|+++|+++++++.|+++++..++. +++++.+|+.+.... .++||+|+++....... +.+.+.|+|||.
T Consensus 101 ~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~-------~~~~D~i~~~~~~~~~~---~~~~~~L~pgG~ 169 (210)
T 3lbf_A 101 HVCSVERIKGLQWQARRRLKNLDLH-NVSTRHGDGWQGWQA-------RAPFDAIIVTAAPPEIP---TALMTQLDEGGI 169 (210)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGCCGG-------GCCEEEEEESSBCSSCC---THHHHTEEEEEE
T ss_pred EEEEEecCHHHHHHHHHHHHHcCCC-ceEEEECCcccCCcc-------CCCccEEEEccchhhhh---HHHHHhcccCcE
Confidence 4899999999999999999999886 799999999874332 46899999987654433 357899999999
Q ss_pred EEEe
Q 032390 81 AVYD 84 (142)
Q Consensus 81 iv~d 84 (142)
+++.
T Consensus 170 lv~~ 173 (210)
T 3lbf_A 170 LVLP 173 (210)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9884
No 97
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=98.79 E-value=4.9e-09 Score=77.47 Aligned_cols=75 Identities=19% Similarity=0.201 Sum_probs=64.2
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|+++|+++++++.|+++++..++.++++++.+|+.+.+ +.++||+|++|++. ...+++.+.+.|+|||.
T Consensus 139 ~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--------~~~~~D~V~~~~~~--~~~~l~~~~~~L~pgG~ 208 (277)
T 1o54_A 139 KVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGF--------DEKDVDALFLDVPD--PWNYIDKCWEALKGGGR 208 (277)
T ss_dssp EEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCC--------SCCSEEEEEECCSC--GGGTHHHHHHHEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcc--------cCCccCEEEECCcC--HHHHHHHHHHHcCCCCE
Confidence 479999999999999999999998778999999998752 14689999998763 35778999999999999
Q ss_pred EEEec
Q 032390 81 AVYDN 85 (142)
Q Consensus 81 iv~dn 85 (142)
+++..
T Consensus 209 l~~~~ 213 (277)
T 1o54_A 209 FATVC 213 (277)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 98853
No 98
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.79 E-value=1e-08 Score=72.27 Aligned_cols=79 Identities=18% Similarity=0.355 Sum_probs=66.1
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC---cCcHHHHHHHHhcccC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK---DNYCNYHERLMKLLKV 77 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~---~~~~~~~~~~~~~L~~ 77 (142)
+++++|+++.+++.|++++...++.++++++++|+.+. + + +.++||+|++.... .....+++.+.+.|+|
T Consensus 68 ~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~-~-----~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~p 140 (219)
T 3dlc_A 68 SIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNI-P-I-----EDNYADLIVSRGSVFFWEDVATAFREIYRILKS 140 (219)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBC-S-S-----CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEE
T ss_pred eEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHC-C-C-----CcccccEEEECchHhhccCHHHHHHHHHHhCCC
Confidence 47999999999999999999999888999999999763 1 2 25789999997642 3457889999999999
Q ss_pred CeEEEEecc
Q 032390 78 GGIAVYDNT 86 (142)
Q Consensus 78 gG~iv~dn~ 86 (142)
||.+++.+.
T Consensus 141 gG~l~~~~~ 149 (219)
T 3dlc_A 141 GGKTYIGGG 149 (219)
T ss_dssp EEEEEEEEC
T ss_pred CCEEEEEec
Confidence 999988643
No 99
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.79 E-value=4.3e-09 Score=78.79 Aligned_cols=80 Identities=15% Similarity=0.152 Sum_probs=65.5
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC------cCcHHHHHHHHhc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK------DNYCNYHERLMKL 74 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~------~~~~~~~~~~~~~ 74 (142)
+|+++|+++.+++.|++++...++.++++++.+|+.+.. + .++||+|++.... .....+++.+.+.
T Consensus 145 ~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~------~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~ 216 (305)
T 3ocj_A 145 QLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLD--T------REGYDLLTSNGLNIYEPDDARVTELYRRFWQA 216 (305)
T ss_dssp EEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCC--C------CSCEEEEECCSSGGGCCCHHHHHHHHHHHHHH
T ss_pred eEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCC--c------cCCeEEEEECChhhhcCCHHHHHHHHHHHHHh
Confidence 479999999999999999999998888999999998741 1 3789999986532 1233478999999
Q ss_pred ccCCeEEEEecccc
Q 032390 75 LKVGGIAVYDNTLW 88 (142)
Q Consensus 75 L~~gG~iv~dn~~~ 88 (142)
|+|||.+++.+...
T Consensus 217 LkpgG~l~i~~~~~ 230 (305)
T 3ocj_A 217 LKPGGALVTSFLTP 230 (305)
T ss_dssp EEEEEEEEEECCCC
T ss_pred cCCCeEEEEEecCC
Confidence 99999999876543
No 100
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.79 E-value=2.5e-08 Score=74.78 Aligned_cols=78 Identities=6% Similarity=0.139 Sum_probs=65.9
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCC-----CcCcHHHHHHHHhcc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDAD-----KDNYCNYHERLMKLL 75 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~-----~~~~~~~~~~~~~~L 75 (142)
+|+++|+++++++.|++++...|+.++++++.+|+.++ +++||+|++... ...+..+++.+.+.|
T Consensus 115 ~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----------~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L 184 (318)
T 2fk8_A 115 NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDF----------AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIM 184 (318)
T ss_dssp EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGC----------CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHS
T ss_pred EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHC----------CCCcCEEEEeChHHhcCHHHHHHHHHHHHHhc
Confidence 48999999999999999999999888899999998653 368999998642 245688999999999
Q ss_pred cCCeEEEEecccc
Q 032390 76 KVGGIAVYDNTLW 88 (142)
Q Consensus 76 ~~gG~iv~dn~~~ 88 (142)
+|||.+++.....
T Consensus 185 kpgG~l~~~~~~~ 197 (318)
T 2fk8_A 185 PADGRMTVQSSVS 197 (318)
T ss_dssp CTTCEEEEEEEEC
T ss_pred CCCcEEEEEEecc
Confidence 9999999865543
No 101
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=98.78 E-value=1.2e-08 Score=73.92 Aligned_cols=80 Identities=23% Similarity=0.325 Sum_probs=66.0
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCC---CcCcHHHHHHHHhcccC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDAD---KDNYCNYHERLMKLLKV 77 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~---~~~~~~~~~~~~~~L~~ 77 (142)
+|+++|+++.+++.|+++++..|+.++++++.+|+.+.. .+++||+|++-.. .++....++.+.+.|+|
T Consensus 61 ~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~--------~~~~fD~V~~~~~~~~~~~~~~~l~~~~r~Lkp 132 (256)
T 1nkv_A 61 TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYV--------ANEKCDVAACVGATWIAGGFAGAEELLAQSLKP 132 (256)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCC--------CSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEE
T ss_pred eEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCC--------cCCCCCEEEECCChHhcCCHHHHHHHHHHHcCC
Confidence 479999999999999999999999889999999997642 1468999998442 12467889999999999
Q ss_pred CeEEEEecccc
Q 032390 78 GGIAVYDNTLW 88 (142)
Q Consensus 78 gG~iv~dn~~~ 88 (142)
||.+++....+
T Consensus 133 gG~l~~~~~~~ 143 (256)
T 1nkv_A 133 GGIMLIGEPYW 143 (256)
T ss_dssp EEEEEEEEEEE
T ss_pred CeEEEEecCcc
Confidence 99999865544
No 102
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=98.76 E-value=1.2e-08 Score=71.74 Aligned_cols=74 Identities=14% Similarity=0.022 Sum_probs=63.5
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+++++|+++.+++.|+++++..++.+ ++++.+|+.+.. +.++||+|++.+. ..+..+++.+.+.|+|||.
T Consensus 91 ~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~--------~~~~~D~i~~~~~-~~~~~~l~~~~~~L~~gG~ 160 (207)
T 1jsx_A 91 HFTLLDSLGKRVRFLRQVQHELKLEN-IEPVQSRVEEFP--------SEPPFDGVISRAF-ASLNDMVSWCHHLPGEQGR 160 (207)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCSS-EEEEECCTTTSC--------CCSCEEEEECSCS-SSHHHHHHHHTTSEEEEEE
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCCC-eEEEecchhhCC--------ccCCcCEEEEecc-CCHHHHHHHHHHhcCCCcE
Confidence 47999999999999999999998865 999999997642 1468999998764 4578899999999999999
Q ss_pred EEEe
Q 032390 81 AVYD 84 (142)
Q Consensus 81 iv~d 84 (142)
+++.
T Consensus 161 l~~~ 164 (207)
T 1jsx_A 161 FYAL 164 (207)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9885
No 103
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.76 E-value=1.6e-08 Score=77.91 Aligned_cols=82 Identities=12% Similarity=0.137 Sum_probs=61.3
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcc---------cCCCceeEEEEcCCCcCcHHHHHHH
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYS---------ENEGSFDYAFVDADKDNYCNYHERL 71 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~---------~~~~~fD~IfiD~~~~~~~~~~~~~ 71 (142)
+|+++|+++++++.|++|++.+|+. +++++.+|+.++++.+.... ....+||+|++|++.... .+.+
T Consensus 237 ~V~gvd~~~~ai~~a~~n~~~ng~~-~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~g~---~~~~ 312 (369)
T 3bt7_A 237 RVLATEIAKPSVAAAQYNIAANHID-NVQIIRMAAEEFTQAMNGVREFNRLQGIDLKSYQCETIFVDPPRSGL---DSET 312 (369)
T ss_dssp EEEEECCCHHHHHHHHHHHHHTTCC-SEEEECCCSHHHHHHHSSCCCCTTGGGSCGGGCCEEEEEECCCTTCC---CHHH
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCC-ceEEEECCHHHHHHHHhhccccccccccccccCCCCEEEECcCcccc---HHHH
Confidence 4899999999999999999999984 79999999999887652100 000379999999986543 2344
Q ss_pred HhcccCCeEEEEecc
Q 032390 72 MKLLKVGGIAVYDNT 86 (142)
Q Consensus 72 ~~~L~~gG~iv~dn~ 86 (142)
.+.|+++|.|++-.+
T Consensus 313 ~~~l~~~g~ivyvsc 327 (369)
T 3bt7_A 313 EKMVQAYPRILYISC 327 (369)
T ss_dssp HHHHTTSSEEEEEES
T ss_pred HHHHhCCCEEEEEEC
Confidence 555668888877543
No 104
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=98.75 E-value=1.1e-09 Score=79.07 Aligned_cols=77 Identities=16% Similarity=0.177 Sum_probs=61.9
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcH---HHHHHHHhcccC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYC---NYHERLMKLLKV 77 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~---~~~~~~~~~L~~ 77 (142)
+|+++|+|+.+++.|+++++..++.++++++++|+.++.+ .++||+|+++++..... ..+..+.+.|+|
T Consensus 102 ~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~--------~~~~D~v~~~~~~~~~~~~~~~~~~~~~~L~p 173 (241)
T 3gdh_A 102 RVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLAS--------FLKADVVFLSPPWGGPDYATAETFDIRTMMSP 173 (241)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGG--------GCCCSEEEECCCCSSGGGGGSSSBCTTTSCSS
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcc--------cCCCCEEEECCCcCCcchhhhHHHHHHhhcCC
Confidence 4899999999999999999999987789999999988642 46899999998754321 133445678999
Q ss_pred CeEEEEec
Q 032390 78 GGIAVYDN 85 (142)
Q Consensus 78 gG~iv~dn 85 (142)
||.++++.
T Consensus 174 gG~~i~~~ 181 (241)
T 3gdh_A 174 DGFEIFRL 181 (241)
T ss_dssp CHHHHHHH
T ss_pred cceeHHHH
Confidence 99987764
No 105
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.74 E-value=4.8e-08 Score=72.11 Aligned_cols=78 Identities=6% Similarity=0.088 Sum_probs=65.8
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCC-----CcCcHHHHHHHHhcc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDAD-----KDNYCNYHERLMKLL 75 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~-----~~~~~~~~~~~~~~L 75 (142)
+|+++|+++++++.|++++...++.++++++.+|+.++ +++||+|++... ...+..+++.+.+.|
T Consensus 89 ~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~----------~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L 158 (287)
T 1kpg_A 89 NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQF----------DEPVDRIVSIGAFEHFGHERYDAFFSLAHRLL 158 (287)
T ss_dssp EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGC----------CCCCSEEEEESCGGGTCTTTHHHHHHHHHHHS
T ss_pred EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhC----------CCCeeEEEEeCchhhcChHHHHHHHHHHHHhc
Confidence 48999999999999999999999888999999998643 368999998642 245688999999999
Q ss_pred cCCeEEEEecccc
Q 032390 76 KVGGIAVYDNTLW 88 (142)
Q Consensus 76 ~~gG~iv~dn~~~ 88 (142)
+|||.+++.....
T Consensus 159 kpgG~l~~~~~~~ 171 (287)
T 1kpg_A 159 PADGVMLLHTITG 171 (287)
T ss_dssp CTTCEEEEEEEEE
T ss_pred CCCCEEEEEEecC
Confidence 9999999876554
No 106
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.74 E-value=1.2e-08 Score=73.68 Aligned_cols=75 Identities=23% Similarity=0.295 Sum_probs=63.2
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|+++|+++++++.|+++++..++.++++++.+|+.+... .++.||+|+++++ ....+++.+.+.|+|||.
T Consensus 115 ~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-------~~~~~D~v~~~~~--~~~~~l~~~~~~L~~gG~ 185 (248)
T 2yvl_A 115 EVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEV-------PEGIFHAAFVDVR--EPWHYLEKVHKSLMEGAP 185 (248)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCC-------CTTCBSEEEECSS--CGGGGHHHHHHHBCTTCE
T ss_pred EEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhccc-------CCCcccEEEECCc--CHHHHHHHHHHHcCCCCE
Confidence 4799999999999999999999987789999999976420 1457999999876 345678899999999999
Q ss_pred EEEe
Q 032390 81 AVYD 84 (142)
Q Consensus 81 iv~d 84 (142)
+++.
T Consensus 186 l~~~ 189 (248)
T 2yvl_A 186 VGFL 189 (248)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9875
No 107
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=98.73 E-value=1.2e-08 Score=78.98 Aligned_cols=76 Identities=12% Similarity=0.086 Sum_probs=62.3
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCC--cEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc--------CcHHHHHH
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDH--KINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD--------NYCNYHER 70 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~--~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~--------~~~~~~~~ 70 (142)
+|+++|+|+.+++.|++|++..++.+ +++++.+|+.+.+ ..++||+|+++++.. ....+++.
T Consensus 248 ~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~--------~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~ 319 (375)
T 4dcm_A 248 KVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGV--------EPFRFNAVLCNPPFHQQHALTDNVAWEMFHH 319 (375)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTC--------CTTCEEEEEECCCC-------CCHHHHHHHH
T ss_pred EEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccC--------CCCCeeEEEECCCcccCcccCHHHHHHHHHH
Confidence 48999999999999999999998754 5888999998742 256899999998732 12367899
Q ss_pred HHhcccCCeEEEEe
Q 032390 71 LMKLLKVGGIAVYD 84 (142)
Q Consensus 71 ~~~~L~~gG~iv~d 84 (142)
+.+.|+|||.+++-
T Consensus 320 ~~~~LkpgG~l~iv 333 (375)
T 4dcm_A 320 ARRCLKINGELYIV 333 (375)
T ss_dssp HHHHEEEEEEEEEE
T ss_pred HHHhCCCCcEEEEE
Confidence 99999999999873
No 108
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.72 E-value=3e-08 Score=72.07 Aligned_cols=78 Identities=15% Similarity=0.150 Sum_probs=63.8
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCC-CcCcHHHHHHHHhcccCCe
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDAD-KDNYCNYHERLMKLLKVGG 79 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~-~~~~~~~~~~~~~~L~~gG 79 (142)
+|+++|+++.+++.|++|++.+|+.++|+++++|+.+.+.. .++||+|++-+- .....++++...+.|+++|
T Consensus 47 ~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~-------~~~~D~IviaGmGg~lI~~IL~~~~~~l~~~~ 119 (230)
T 3lec_A 47 FAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEE-------ADNIDTITICGMGGRLIADILNNDIDKLQHVK 119 (230)
T ss_dssp EEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG-------GGCCCEEEEEEECHHHHHHHHHHTGGGGTTCC
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhcccc-------ccccCEEEEeCCchHHHHHHHHHHHHHhCcCC
Confidence 48999999999999999999999998999999999886431 237999987442 2235677888888999999
Q ss_pred EEEEec
Q 032390 80 IAVYDN 85 (142)
Q Consensus 80 ~iv~dn 85 (142)
.+|..-
T Consensus 120 ~lIlqp 125 (230)
T 3lec_A 120 TLVLQP 125 (230)
T ss_dssp EEEEEE
T ss_pred EEEEEC
Confidence 998864
No 109
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.72 E-value=1.3e-07 Score=73.86 Aligned_cols=127 Identities=13% Similarity=0.189 Sum_probs=81.3
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHH--HHHHhhcccCCCceeEEEEcCCC--cCcHHHHHHHHhccc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV--LDQLLKYSENEGSFDYAFVDADK--DNYCNYHERLMKLLK 76 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~--l~~~~~~~~~~~~fD~IfiD~~~--~~~~~~~~~~~~~L~ 76 (142)
+|+++|+++++. . ..++++++++|+.+. +..+.+ ..++||+|++|+.. .++...|+.+.+.|+
T Consensus 249 ~V~GVDiSp~m~---------~-~~~rI~fv~GDa~dlpf~~~l~~---~d~sFDlVisdgsH~~~d~~~aL~el~rvLK 315 (419)
T 3sso_A 249 QIYGLDIMDKSH---------V-DELRIRTIQGDQNDAEFLDRIAR---RYGPFDIVIDDGSHINAHVRTSFAALFPHVR 315 (419)
T ss_dssp EEEEEESSCCGG---------G-CBTTEEEEECCTTCHHHHHHHHH---HHCCEEEEEECSCCCHHHHHHHHHHHGGGEE
T ss_pred EEEEEECCHHHh---------h-cCCCcEEEEecccccchhhhhhc---ccCCccEEEECCcccchhHHHHHHHHHHhcC
Confidence 489999999972 1 236899999999763 322211 03689999999764 235677899999999
Q ss_pred CCeEEEEecccccccccC-CCCCCCCCCCcchHHHHHHHHHHhhcC---------CCee---EEeeecCceeEEEEEe
Q 032390 77 VGGIAVYDNTLWGGTVAV-PEEQVPDHFRGSSRQAILDLNRSLADD---------PRVQ---LSHVALGDGITICRRI 141 (142)
Q Consensus 77 ~gG~iv~dn~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~---------~~~~---~~~lp~gdG~~i~~~~ 141 (142)
|||+++++++..+-.... .....+....+ ..+.++++...+... |.+. ..-+.+.+++.+..|+
T Consensus 316 PGGvlVi~Dl~tsy~p~f~G~~~~~~~~~t-ii~~lk~l~D~l~~~~~~~~~~~~~~~~~~~~~~~h~y~~i~~~~kg 392 (419)
T 3sso_A 316 PGGLYVIEDMWTAYWPGFGGQADPQECSGT-SLGLLKSLIDAIQHQELPSDPNRSPGYVDRNIVGLHVYHNVAFVEKG 392 (419)
T ss_dssp EEEEEEEECGGGGGCTBTTCCSSTTCCTTS-HHHHHHHHHHHHTGGGSCCCTTCCCCHHHHHEEEEEEETTEEEEEES
T ss_pred CCeEEEEEecccccCcccCCCccCCcchhH-HHHHHHHHHHHhcccccCCCcCCCCCccccceeEEEecCcEEEEEec
Confidence 999999998874221111 11000111122 677788887776531 2231 3456788888777664
No 110
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.72 E-value=1.6e-08 Score=73.31 Aligned_cols=79 Identities=11% Similarity=0.092 Sum_probs=63.9
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCC-CcCcHHHHHHHHhcccCCe
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDAD-KDNYCNYHERLMKLLKVGG 79 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~-~~~~~~~~~~~~~~L~~gG 79 (142)
+|+++|+|+.+++.|++|++.+|+.++|+++.+|+.+.++. .++||+|++-+. ......+++.+.+.|+++|
T Consensus 41 ~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~-------~~~~D~IviaG~Gg~~i~~Il~~~~~~L~~~~ 113 (225)
T 3kr9_A 41 SAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEE-------TDQVSVITIAGMGGRLIARILEEGLGKLANVE 113 (225)
T ss_dssp EEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG-------GGCCCEEEEEEECHHHHHHHHHHTGGGCTTCC
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhccc-------CcCCCEEEEcCCChHHHHHHHHHHHHHhCCCC
Confidence 48999999999999999999999988999999999775431 226999997442 2225677888889999999
Q ss_pred EEEEecc
Q 032390 80 IAVYDNT 86 (142)
Q Consensus 80 ~iv~dn~ 86 (142)
.+|..-.
T Consensus 114 ~lVlq~~ 120 (225)
T 3kr9_A 114 RLILQPN 120 (225)
T ss_dssp EEEEEES
T ss_pred EEEEECC
Confidence 9988643
No 111
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.71 E-value=3.3e-08 Score=72.92 Aligned_cols=81 Identities=15% Similarity=0.111 Sum_probs=60.1
Q ss_pred CEEEEeCCh--------------hHHHHHHHHHHHc----------CCC---CcEEEEEccHHHHHHHHhhcccCCCcee
Q 032390 1 MITAIDVNR--------------ETYEIGLPIIKKA----------GVD---HKINFIESEALSVLDQLLKYSENEGSFD 53 (142)
Q Consensus 1 ~v~~ve~~~--------------~~~~~a~~~~~~~----------~~~---~~v~~~~~da~~~l~~~~~~~~~~~~fD 53 (142)
+++++|..| +..+.|+++++.. .+. .+++++.||+.+.++.+... ...+||
T Consensus 98 ~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~--~~~~~D 175 (257)
T 2qy6_A 98 HFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCHRLLLDEGRVTLDLWFGDINELISQLDDS--LNQKVD 175 (257)
T ss_dssp EEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSEEEEEEEC--CEEEEEEESCHHHHGGGSCGG--GTTCEE
T ss_pred EEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccchhheeccCCceEEEEEECcHHHHHhhcccc--cCCeEE
Confidence 378999987 5555788887762 121 46889999999988765210 013799
Q ss_pred EEEEcCC--CcC----cHHHHHHHHhcccCCeEEEE
Q 032390 54 YAFVDAD--KDN----YCNYHERLMKLLKVGGIAVY 83 (142)
Q Consensus 54 ~IfiD~~--~~~----~~~~~~~~~~~L~~gG~iv~ 83 (142)
+||+|+. +.+ +.++|+.+.++|+|||++++
T Consensus 176 ~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 176 AWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp EEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred EEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEE
Confidence 9999984 323 67899999999999999986
No 112
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=98.70 E-value=4.4e-09 Score=73.96 Aligned_cols=79 Identities=10% Similarity=0.153 Sum_probs=43.4
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC-----------------
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN----------------- 63 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~----------------- 63 (142)
+++++|+|+.+++.|++++...+. +++++++|+.+.++.... ..++||+|++|++...
T Consensus 56 ~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~---~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~ 130 (215)
T 4dzr_A 56 SVTAVDLSMDALAVARRNAERFGA--VVDWAAADGIEWLIERAE---RGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPR 130 (215)
T ss_dssp EEEEEECC---------------------CCHHHHHHHHHHHHH---TTCCBSEEEECCCCCC-----------------
T ss_pred eEEEEECCHHHHHHHHHHHHHhCC--ceEEEEcchHhhhhhhhh---ccCcccEEEECCCCCCCccccccChhhhccCcc
Confidence 479999999999999999998877 799999999886654211 1378999999865311
Q ss_pred ------------cHHHHHHHHhcccCCeE-EEEe
Q 032390 64 ------------YCNYHERLMKLLKVGGI-AVYD 84 (142)
Q Consensus 64 ------------~~~~~~~~~~~L~~gG~-iv~d 84 (142)
|..+++.+.++|+|||. +++.
T Consensus 131 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 164 (215)
T 4dzr_A 131 LALDGGEDGLQFYRRMAALPPYVLARGRAGVFLE 164 (215)
T ss_dssp -------CTTHHHHHHHTCCGGGBCSSSEEEEEE
T ss_pred ccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 15566677789999999 5553
No 113
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.69 E-value=1.7e-08 Score=76.55 Aligned_cols=76 Identities=14% Similarity=0.194 Sum_probs=58.2
Q ss_pred CEEEEeCChhHHHHHHHHHHHcC----------CCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHH
Q 032390 1 MITAIDVNRETYEIGLPIIKKAG----------VDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHER 70 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~----------~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~ 70 (142)
+|+++|+++.+++.|+++++..+ ..++++++.+|+.+.+..+. .++||+|++|.+. ...+++.
T Consensus 132 ~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~~-----~~~fD~V~~~~~~--~~~~l~~ 204 (336)
T 2b25_A 132 RVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDIK-----SLTFDAVALDMLN--PHVTLPV 204 (336)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC------------EEEEEECSSS--TTTTHHH
T ss_pred eEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccccC-----CCCeeEEEECCCC--HHHHHHH
Confidence 48999999999999999998743 33589999999987543331 4579999998754 3447889
Q ss_pred HHhcccCCeEEEE
Q 032390 71 LMKLLKVGGIAVY 83 (142)
Q Consensus 71 ~~~~L~~gG~iv~ 83 (142)
+.+.|+|||.+++
T Consensus 205 ~~~~LkpgG~lv~ 217 (336)
T 2b25_A 205 FYPHLKHGGVCAV 217 (336)
T ss_dssp HGGGEEEEEEEEE
T ss_pred HHHhcCCCcEEEE
Confidence 9999999999986
No 114
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=98.69 E-value=2.3e-08 Score=72.53 Aligned_cols=74 Identities=12% Similarity=0.095 Sum_probs=62.0
Q ss_pred CEEEEeCChhHHHHHHHHHHHc-CCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCe
Q 032390 1 MITAIDVNRETYEIGLPIIKKA-GVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGG 79 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~-~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG 79 (142)
+|+++|+++++++.|+++++.. | .++++++.+|+.+. .+ ++++||+|++|.+. ...+++.+.+.|+|||
T Consensus 123 ~v~~~D~~~~~~~~a~~~~~~~~g-~~~v~~~~~d~~~~--~~-----~~~~~D~v~~~~~~--~~~~l~~~~~~L~~gG 192 (258)
T 2pwy_A 123 LVESYEARPHHLAQAERNVRAFWQ-VENVRFHLGKLEEA--EL-----EEAAYDGVALDLME--PWKVLEKAALALKPDR 192 (258)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHCC-CCCEEEEESCGGGC--CC-----CTTCEEEEEEESSC--GGGGHHHHHHHEEEEE
T ss_pred EEEEEeCCHHHHHHHHHHHHHhcC-CCCEEEEECchhhc--CC-----CCCCcCEEEECCcC--HHHHHHHHHHhCCCCC
Confidence 4799999999999999999988 8 46899999999875 12 14689999998753 4578899999999999
Q ss_pred EEEEe
Q 032390 80 IAVYD 84 (142)
Q Consensus 80 ~iv~d 84 (142)
.+++.
T Consensus 193 ~l~~~ 197 (258)
T 2pwy_A 193 FLVAY 197 (258)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99874
No 115
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=98.67 E-value=4.3e-08 Score=71.71 Aligned_cols=81 Identities=16% Similarity=0.315 Sum_probs=66.8
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCC---CcCcHHHHHHHHhcccC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDAD---KDNYCNYHERLMKLLKV 77 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~---~~~~~~~~~~~~~~L~~ 77 (142)
+|+++|+++.+++.|++++...|+.++++++.+|+.+. + + ++++||+|++... .++...+++.+.+.|+|
T Consensus 86 ~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~-~-----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~p 158 (273)
T 3bus_A 86 RVTGISISRPQVNQANARATAAGLANRVTFSYADAMDL-P-F-----EDASFDAVWALESLHHMPDRGRALREMARVLRP 158 (273)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC-C-S-----CTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEE
T ss_pred EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccC-C-C-----CCCCccEEEEechhhhCCCHHHHHHHHHHHcCC
Confidence 48999999999999999999999988999999999763 1 1 2468999997543 23457889999999999
Q ss_pred CeEEEEecccc
Q 032390 78 GGIAVYDNTLW 88 (142)
Q Consensus 78 gG~iv~dn~~~ 88 (142)
||.+++.....
T Consensus 159 gG~l~i~~~~~ 169 (273)
T 3bus_A 159 GGTVAIADFVL 169 (273)
T ss_dssp EEEEEEEEEEE
T ss_pred CeEEEEEEeec
Confidence 99999876554
No 116
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.66 E-value=3.3e-08 Score=70.71 Aligned_cols=77 Identities=18% Similarity=0.157 Sum_probs=59.8
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcH-HHHHHHHhcccCCe
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYC-NYHERLMKLLKVGG 79 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~-~~~~~~~~~L~~gG 79 (142)
+|+++|.++.+++.++++.+.. ++++++.+|+.+...... ..++||+|++|.+..... .+++.+.+.|+|||
T Consensus 100 ~v~~vD~s~~~~~~~~~~~~~~---~~v~~~~~d~~~~~~~~~----~~~~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG 172 (227)
T 1g8a_A 100 KIFGIEFSPRVLRELVPIVEER---RNIVPILGDATKPEEYRA----LVPKVDVIFEDVAQPTQAKILIDNAEVYLKRGG 172 (227)
T ss_dssp EEEEEESCHHHHHHHHHHHSSC---TTEEEEECCTTCGGGGTT----TCCCEEEEEECCCSTTHHHHHHHHHHHHEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHhcc---CCCEEEEccCCCcchhhc----ccCCceEEEECCCCHhHHHHHHHHHHHhcCCCC
Confidence 4799999999999999988664 579999999976321000 135899999998754443 34889999999999
Q ss_pred EEEEe
Q 032390 80 IAVYD 84 (142)
Q Consensus 80 ~iv~d 84 (142)
.+++.
T Consensus 173 ~l~~~ 177 (227)
T 1g8a_A 173 YGMIA 177 (227)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99886
No 117
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.66 E-value=3e-08 Score=70.86 Aligned_cols=78 Identities=21% Similarity=0.261 Sum_probs=60.8
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCC----CCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhccc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGV----DHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLK 76 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~----~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~ 76 (142)
+|+++|+++++++.|+++++..++ .++++++.+|+.+..+.... ..++||+|++++.... +++.+.+.|+
T Consensus 111 ~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~---~~~~fD~I~~~~~~~~---~~~~~~~~Lk 184 (227)
T 2pbf_A 111 YVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKK---ELGLFDAIHVGASASE---LPEILVDLLA 184 (227)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHH---HHCCEEEEEECSBBSS---CCHHHHHHEE
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCc---cCCCcCEEEECCchHH---HHHHHHHhcC
Confidence 489999999999999999999873 35799999999874311000 1367999999987543 4577889999
Q ss_pred CCeEEEEe
Q 032390 77 VGGIAVYD 84 (142)
Q Consensus 77 ~gG~iv~d 84 (142)
|||.+++.
T Consensus 185 pgG~lv~~ 192 (227)
T 2pbf_A 185 ENGKLIIP 192 (227)
T ss_dssp EEEEEEEE
T ss_pred CCcEEEEE
Confidence 99999875
No 118
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.66 E-value=7.5e-09 Score=75.33 Aligned_cols=81 Identities=11% Similarity=0.101 Sum_probs=60.1
Q ss_pred CEEEEeCChhHHHHHHHHHHHc---CCCCc-------------------------EE-------------EEEccHHHHH
Q 032390 1 MITAIDVNRETYEIGLPIIKKA---GVDHK-------------------------IN-------------FIESEALSVL 39 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~---~~~~~-------------------------v~-------------~~~~da~~~l 39 (142)
+|+++|+|+.+++.|++++... ++.++ ++ ++++|+.+.+
T Consensus 79 ~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~ 158 (250)
T 1o9g_A 79 QVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPR 158 (250)
T ss_dssp EEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGG
T ss_pred eEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhhhhhhhhhccccccccccceeeccccccc
Confidence 4899999999999999999876 55333 67 9999987743
Q ss_pred HHHhhcccCCCceeEEEEcCCCc------------CcHHHHHHHHhcccCCeEEEE
Q 032390 40 DQLLKYSENEGSFDYAFVDADKD------------NYCNYHERLMKLLKVGGIAVY 83 (142)
Q Consensus 40 ~~~~~~~~~~~~fD~IfiD~~~~------------~~~~~~~~~~~~L~~gG~iv~ 83 (142)
+.... ....+||+|+++++.. .+..+++.+.+.|+|||.+++
T Consensus 159 ~~~~~--~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 212 (250)
T 1o9g_A 159 ALSAV--LAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVIAV 212 (250)
T ss_dssp GHHHH--HTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred ccccc--cCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEEEE
Confidence 21000 0134899999987521 234788889999999999987
No 119
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=98.66 E-value=1.8e-08 Score=74.48 Aligned_cols=74 Identities=11% Similarity=0.265 Sum_probs=62.3
Q ss_pred CEEEEeCChhHHHHHHHHHHHc-CCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCe
Q 032390 1 MITAIDVNRETYEIGLPIIKKA-GVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGG 79 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~-~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG 79 (142)
+|+++|+++++++.|+++++.. |. ++++++.+|+.+.+ ++++||+|++|.+. ...+++.+.+.|+|||
T Consensus 137 ~v~~vD~s~~~~~~a~~~~~~~~g~-~~v~~~~~d~~~~~--------~~~~fD~Vi~~~~~--~~~~l~~~~~~LkpgG 205 (275)
T 1yb2_A 137 TLTVVERDEDNLKKAMDNLSEFYDI-GNVRTSRSDIADFI--------SDQMYDAVIADIPD--PWNHVQKIASMMKPGS 205 (275)
T ss_dssp EEEEECSCHHHHHHHHHHHHTTSCC-TTEEEECSCTTTCC--------CSCCEEEEEECCSC--GGGSHHHHHHTEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHhcCCC-CcEEEEECchhccC--------cCCCccEEEEcCcC--HHHHHHHHHHHcCCCC
Confidence 4899999999999999999988 85 57999999997632 24689999998753 4678999999999999
Q ss_pred EEEEec
Q 032390 80 IAVYDN 85 (142)
Q Consensus 80 ~iv~dn 85 (142)
.+++..
T Consensus 206 ~l~i~~ 211 (275)
T 1yb2_A 206 VATFYL 211 (275)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 998753
No 120
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.65 E-value=3.6e-08 Score=76.51 Aligned_cols=75 Identities=11% Similarity=0.100 Sum_probs=62.2
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc--------CcHHHHHHHH
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD--------NYCNYHERLM 72 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~--------~~~~~~~~~~ 72 (142)
+|+++|+|+.+++.|++|++..++. ++++.+|+.+... ..++||+|+++++.. ....+++.+.
T Consensus 257 ~V~gvDis~~al~~A~~n~~~~~~~--v~~~~~D~~~~~~-------~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~ 327 (381)
T 3dmg_A 257 EVVGVEDDLASVLSLQKGLEANALK--AQALHSDVDEALT-------EEARFDIIVTNPPFHVGGAVILDVAQAFVNVAA 327 (381)
T ss_dssp EEEEEESBHHHHHHHHHHHHHTTCC--CEEEECSTTTTSC-------TTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHH
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCC--eEEEEcchhhccc-------cCCCeEEEEECCchhhcccccHHHHHHHHHHHH
Confidence 4899999999999999999998874 8999999987532 136899999997543 2457888899
Q ss_pred hcccCCeEEEEe
Q 032390 73 KLLKVGGIAVYD 84 (142)
Q Consensus 73 ~~L~~gG~iv~d 84 (142)
+.|+|||.+++.
T Consensus 328 ~~LkpGG~l~iv 339 (381)
T 3dmg_A 328 ARLRPGGVFFLV 339 (381)
T ss_dssp HHEEEEEEEEEE
T ss_pred HhcCcCcEEEEE
Confidence 999999999874
No 121
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.64 E-value=3.9e-08 Score=74.20 Aligned_cols=72 Identities=19% Similarity=0.373 Sum_probs=60.3
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeEE
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIA 81 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~i 81 (142)
|+++|+++++++.|+++++..|+.+ ++++.+|+.+.++. .++||+|++++...... +.+.+.|+|||.+
T Consensus 103 v~gvD~s~~~~~~a~~~~~~~g~~~-v~~~~~d~~~~~~~-------~~~fD~Iv~~~~~~~~~---~~~~~~LkpgG~l 171 (317)
T 1dl5_A 103 VVSVEYSRKICEIAKRNVERLGIEN-VIFVCGDGYYGVPE-------FSPYDVIFVTVGVDEVP---ETWFTQLKEGGRV 171 (317)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCCS-EEEEESCGGGCCGG-------GCCEEEEEECSBBSCCC---HHHHHHEEEEEEE
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCC-eEEEECChhhcccc-------CCCeEEEEEcCCHHHHH---HHHHHhcCCCcEE
Confidence 8999999999999999999999864 99999999874331 46899999998755433 5677899999999
Q ss_pred EEe
Q 032390 82 VYD 84 (142)
Q Consensus 82 v~d 84 (142)
++.
T Consensus 172 vi~ 174 (317)
T 1dl5_A 172 IVP 174 (317)
T ss_dssp EEE
T ss_pred EEE
Confidence 885
No 122
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.64 E-value=3.3e-08 Score=73.72 Aligned_cols=88 Identities=15% Similarity=0.299 Sum_probs=62.1
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCC-------------------------------------------------------
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVD------------------------------------------------------- 25 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~------------------------------------------------------- 25 (142)
+|+++|+|+.+++.|+++++..+..
T Consensus 72 ~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~p~~~~~~~~~~~ 151 (292)
T 3g07_A 72 RMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSCFPASLTASRGPIAAPQVPLDGADTSV 151 (292)
T ss_dssp EEEEEESCHHHHHHHHHTC---------------------------------------------------CCSSTTCCSS
T ss_pred EEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccccccchhhhccCcccccccccccccccc
Confidence 4899999999999999998765532
Q ss_pred --CcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC---------cCcHHHHHHHHhcccCCeEEEEecccccc
Q 032390 26 --HKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK---------DNYCNYHERLMKLLKVGGIAVYDNTLWGG 90 (142)
Q Consensus 26 --~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~---------~~~~~~~~~~~~~L~~gG~iv~dn~~~~g 90 (142)
++|++.++|+......+.. ...++||+|++-... .....+++.+.+.|+|||.+++....|..
T Consensus 152 ~p~~v~f~~~d~~~~~~~~~~--~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~~~~~LkpGG~lil~~~~~~~ 225 (292)
T 3g07_A 152 FPNNVVFVTGNYVLDRDDLVE--AQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRRIYRHLRPGGILVLEPQPWSS 225 (292)
T ss_dssp TTTTEEEEECCCCCSSHHHHT--TCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCHHH
T ss_pred ccccceEEecccccCcccccc--ccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHHHHHHhCCCcEEEEecCCchh
Confidence 5899999998632211110 025789999987642 13556888999999999999997666643
No 123
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.64 E-value=4.1e-08 Score=75.89 Aligned_cols=79 Identities=14% Similarity=0.178 Sum_probs=65.1
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCC------CcCcHHHHHHHHhc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDAD------KDNYCNYHERLMKL 74 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~------~~~~~~~~~~~~~~ 74 (142)
+|+++|.+ .+++.|+++++..++.++++++++|+.++. + +++||+|+++.. ......+++.+.++
T Consensus 88 ~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~------~~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~ 158 (376)
T 3r0q_C 88 KVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDIS--L------PEKVDVIISEWMGYFLLRESMFDSVISARDRW 158 (376)
T ss_dssp EEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCC--C------SSCEEEEEECCCBTTBTTTCTHHHHHHHHHHH
T ss_pred EEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcC--c------CCcceEEEEcChhhcccchHHHHHHHHHHHhh
Confidence 48999999 999999999999999889999999998752 1 368999999762 12345678888899
Q ss_pred ccCCeEEEEecccc
Q 032390 75 LKVGGIAVYDNTLW 88 (142)
Q Consensus 75 L~~gG~iv~dn~~~ 88 (142)
|+|||+++.+....
T Consensus 159 LkpgG~li~~~~~~ 172 (376)
T 3r0q_C 159 LKPTGVMYPSHARM 172 (376)
T ss_dssp EEEEEEEESSEEEE
T ss_pred CCCCeEEEEecCeE
Confidence 99999999876554
No 124
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.64 E-value=7.8e-08 Score=70.43 Aligned_cols=78 Identities=12% Similarity=0.147 Sum_probs=63.3
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcC-CCcCcHHHHHHHHhcccCCe
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDA-DKDNYCNYHERLMKLLKVGG 79 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~-~~~~~~~~~~~~~~~L~~gG 79 (142)
+|+++|+|+.+++.|++|++.+|+.++|+++.+|+.+.+.. .++||+|++-+ ......++++...+.|++++
T Consensus 47 ~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~-------~~~~D~IviagmGg~lI~~IL~~~~~~L~~~~ 119 (244)
T 3gnl_A 47 FAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEK-------KDAIDTIVIAGMGGTLIRTILEEGAAKLAGVT 119 (244)
T ss_dssp EEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG-------GGCCCEEEEEEECHHHHHHHHHHTGGGGTTCC
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCc-------cccccEEEEeCCchHHHHHHHHHHHHHhCCCC
Confidence 48999999999999999999999988999999999876431 23599998743 22335677888888999999
Q ss_pred EEEEec
Q 032390 80 IAVYDN 85 (142)
Q Consensus 80 ~iv~dn 85 (142)
.+|..-
T Consensus 120 ~lIlq~ 125 (244)
T 3gnl_A 120 KLILQP 125 (244)
T ss_dssp EEEEEE
T ss_pred EEEEEc
Confidence 998864
No 125
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.63 E-value=1.9e-08 Score=72.19 Aligned_cols=78 Identities=12% Similarity=0.144 Sum_probs=63.4
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCC-----CcCcHHHHHHHHhcc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDAD-----KDNYCNYHERLMKLL 75 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~-----~~~~~~~~~~~~~~L 75 (142)
+|+++|+++.+++.|++++...+...+++++.+|+.+.. ..++||+|++-.. ......+++.+.+.|
T Consensus 90 ~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--------~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L 161 (235)
T 3lcc_A 90 FVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR--------PTELFDLIFDYVFFCAIEPEMRPAWAKSMYELL 161 (235)
T ss_dssp EEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC--------CSSCEEEEEEESSTTTSCGGGHHHHHHHHHHHE
T ss_pred eEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC--------CCCCeeEEEEChhhhcCCHHHHHHHHHHHHHHC
Confidence 479999999999999999987766678999999998742 1468999997542 225678899999999
Q ss_pred cCCeEEEEecc
Q 032390 76 KVGGIAVYDNT 86 (142)
Q Consensus 76 ~~gG~iv~dn~ 86 (142)
+|||.+++...
T Consensus 162 kpgG~l~~~~~ 172 (235)
T 3lcc_A 162 KPDGELITLMY 172 (235)
T ss_dssp EEEEEEEEEEC
T ss_pred CCCcEEEEEEe
Confidence 99999987543
No 126
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.63 E-value=7.1e-08 Score=71.23 Aligned_cols=74 Identities=12% Similarity=0.124 Sum_probs=61.3
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCC-----CcCcHHHHHHHHhcc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDAD-----KDNYCNYHERLMKLL 75 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~-----~~~~~~~~~~~~~~L 75 (142)
+|+++|+|+.+++.|++++...++ +++++.+|+.+.. ..++||+|++... .+....+++.+.+.|
T Consensus 144 ~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~--------~~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~~L 213 (286)
T 3m70_A 144 DVTSWDHNENSIAFLNETKEKENL--NISTALYDINAAN--------IQENYDFIVSTVVFMFLNRERVPSIIKNMKEHT 213 (286)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCGGGCC--------CCSCEEEEEECSSGGGSCGGGHHHHHHHHHHTE
T ss_pred eEEEEECCHHHHHHHHHHHHHcCC--ceEEEEecccccc--------ccCCccEEEEccchhhCCHHHHHHHHHHHHHhc
Confidence 489999999999999999999887 7999999997642 1468999999763 234568899999999
Q ss_pred cCCeEEEEe
Q 032390 76 KVGGIAVYD 84 (142)
Q Consensus 76 ~~gG~iv~d 84 (142)
+|||.+++-
T Consensus 214 kpgG~l~i~ 222 (286)
T 3m70_A 214 NVGGYNLIV 222 (286)
T ss_dssp EEEEEEEEE
T ss_pred CCCcEEEEE
Confidence 999996653
No 127
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.63 E-value=5.9e-08 Score=71.94 Aligned_cols=81 Identities=12% Similarity=0.232 Sum_probs=66.6
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCC---CcCcHHHHHHHHhcccC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDAD---KDNYCNYHERLMKLLKV 77 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~---~~~~~~~~~~~~~~L~~ 77 (142)
+|+++|+++.+++.|++++...|+.++++++.+|+.+. + + ++++||+|++... .+....+++.+.+.|+|
T Consensus 107 ~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~-~-----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkp 179 (297)
T 2o57_A 107 SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEI-P-C-----EDNSYDFIWSQDAFLHSPDKLKVFQECARVLKP 179 (297)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSC-S-S-----CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEE
T ss_pred EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccC-C-C-----CCCCEeEEEecchhhhcCCHHHHHHHHHHHcCC
Confidence 47999999999999999999999988999999999763 1 1 2568999998643 23357889999999999
Q ss_pred CeEEEEecccc
Q 032390 78 GGIAVYDNTLW 88 (142)
Q Consensus 78 gG~iv~dn~~~ 88 (142)
||.+++.....
T Consensus 180 gG~l~~~~~~~ 190 (297)
T 2o57_A 180 RGVMAITDPMK 190 (297)
T ss_dssp EEEEEEEEEEE
T ss_pred CeEEEEEEecc
Confidence 99998876544
No 128
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.63 E-value=5.7e-08 Score=72.86 Aligned_cols=81 Identities=14% Similarity=0.274 Sum_probs=66.1
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC--cCcHHHHHHHHhcccCC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK--DNYCNYHERLMKLLKVG 78 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~--~~~~~~~~~~~~~L~~g 78 (142)
+|+++|+++++++.|+++++..|+.++++++.+|+.+. + + ..++||+|++.... -....+++.+.+.|+||
T Consensus 142 ~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~-~-----~~~~fD~V~~~~~l~~~~~~~~l~~~~~~Lkpg 214 (312)
T 3vc1_A 142 RVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDT-P-F-----DKGAVTASWNNESTMYVDLHDLFSEHSRFLKVG 214 (312)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC-C-C-----CTTCEEEEEEESCGGGSCHHHHHHHHHHHEEEE
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcC-C-C-----CCCCEeEEEECCchhhCCHHHHHHHHHHHcCCC
Confidence 48999999999999999999999988999999999763 1 1 24789999985321 13688899999999999
Q ss_pred eEEEEecccc
Q 032390 79 GIAVYDNTLW 88 (142)
Q Consensus 79 G~iv~dn~~~ 88 (142)
|.+++-....
T Consensus 215 G~l~~~~~~~ 224 (312)
T 3vc1_A 215 GRYVTITGCW 224 (312)
T ss_dssp EEEEEEEEEE
T ss_pred cEEEEEEccc
Confidence 9998765443
No 129
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.62 E-value=1.4e-07 Score=68.52 Aligned_cols=79 Identities=16% Similarity=0.244 Sum_probs=60.8
Q ss_pred CEEEEeCChhHHHHHHHHHHH------cCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc-----------C
Q 032390 1 MITAIDVNRETYEIGLPIIKK------AGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD-----------N 63 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~------~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~-----------~ 63 (142)
.|+++|+++.+++.|+++++. .++ .+++++.+|+.+.++... ..++||.|++.-+.+ .
T Consensus 72 ~v~GiDis~~~l~~A~~~~~~l~~~~~~~~-~nv~~~~~d~~~~l~~~~----~~~~~D~v~~~~~dp~~k~~h~krr~~ 146 (235)
T 3ckk_A 72 LILGLEIRVKVSDYVQDRIRALRAAPAGGF-QNIACLRSNAMKHLPNFF----YKGQLTKMFFLFPDPHFKRTKHKWRII 146 (235)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHHHSTTCCC-TTEEEEECCTTTCHHHHC----CTTCEEEEEEESCC-----------CC
T ss_pred eEEEEECCHHHHHHHHHHHHHHHHHHhcCC-CeEEEEECcHHHhhhhhC----CCcCeeEEEEeCCCchhhhhhhhhhhh
Confidence 379999999999999998865 344 479999999987555431 257899999854321 1
Q ss_pred cHHHHHHHHhcccCCeEEEEe
Q 032390 64 YCNYHERLMKLLKVGGIAVYD 84 (142)
Q Consensus 64 ~~~~~~~~~~~L~~gG~iv~d 84 (142)
+..+++.+.+.|+|||.+++.
T Consensus 147 ~~~~l~~~~~~LkpGG~l~~~ 167 (235)
T 3ckk_A 147 SPTLLAEYAYVLRVGGLVYTI 167 (235)
T ss_dssp CHHHHHHHHHHEEEEEEEEEE
T ss_pred hHHHHHHHHHHCCCCCEEEEE
Confidence 357899999999999999863
No 130
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.62 E-value=7.3e-08 Score=70.01 Aligned_cols=78 Identities=17% Similarity=0.265 Sum_probs=61.8
Q ss_pred CEEEEeCChhHHHHHHHHHHHc--------CCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC---------
Q 032390 1 MITAIDVNRETYEIGLPIIKKA--------GVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--------- 63 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~--------~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--------- 63 (142)
+|+++|+++.+++.|+++++.. ++. +++++.+|+.+.++... ..+.+|.|++.-+.+.
T Consensus 75 ~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~-nv~~~~~D~~~~l~~~~----~~~~~d~v~~~~p~p~~k~~~~~~r 149 (246)
T 2vdv_E 75 LILGMEIRVQVTNYVEDRIIALRNNTASKHGFQ-NINVLRGNAMKFLPNFF----EKGQLSKMFFCFPDPHFKQRKHKAR 149 (246)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTT-TEEEEECCTTSCGGGTS----CTTCEEEEEEESCCCC------CSS
T ss_pred CEEEEEcCHHHHHHHHHHHHHHhhccccccCCC-cEEEEeccHHHHHHHhc----cccccCEEEEECCCcccccchhHHh
Confidence 3899999999999999999876 664 79999999987555321 2468999987533221
Q ss_pred --cHHHHHHHHhcccCCeEEEE
Q 032390 64 --YCNYHERLMKLLKVGGIAVY 83 (142)
Q Consensus 64 --~~~~~~~~~~~L~~gG~iv~ 83 (142)
+..+++.+.++|+|||.+++
T Consensus 150 ~~~~~~l~~~~~~LkpgG~l~~ 171 (246)
T 2vdv_E 150 IITNTLLSEYAYVLKEGGVVYT 171 (246)
T ss_dssp CCCHHHHHHHHHHEEEEEEEEE
T ss_pred hccHHHHHHHHHHcCCCCEEEE
Confidence 25889999999999999887
No 131
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.61 E-value=2.5e-08 Score=71.17 Aligned_cols=74 Identities=18% Similarity=0.250 Sum_probs=59.8
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCC----CCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhccc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGV----DHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLK 76 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~----~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~ 76 (142)
+|+++|+++.+++.|++++...+. .++++++.+|+.+... ..++||+|++++.... +++.+.+.|+
T Consensus 104 ~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-------~~~~fD~i~~~~~~~~---~~~~~~~~Lk 173 (226)
T 1i1n_A 104 KVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYA-------EEAPYDAIHVGAAAPV---VPQALIDQLK 173 (226)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCG-------GGCCEEEEEECSBBSS---CCHHHHHTEE
T ss_pred EEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcc-------cCCCcCEEEECCchHH---HHHHHHHhcC
Confidence 489999999999999999998764 4579999999875321 1457999999986543 3467889999
Q ss_pred CCeEEEEe
Q 032390 77 VGGIAVYD 84 (142)
Q Consensus 77 ~gG~iv~d 84 (142)
|||.+++.
T Consensus 174 pgG~lv~~ 181 (226)
T 1i1n_A 174 PGGRLILP 181 (226)
T ss_dssp EEEEEEEE
T ss_pred CCcEEEEE
Confidence 99999885
No 132
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.58 E-value=8.1e-08 Score=73.52 Aligned_cols=79 Identities=16% Similarity=0.202 Sum_probs=64.1
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCC------CcCcHHHHHHHHhc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDAD------KDNYCNYHERLMKL 74 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~------~~~~~~~~~~~~~~ 74 (142)
+|+++|+++ +++.|+++++..++.++++++.+|+.++ .+ +.++||+|+++.. ......+++.+.++
T Consensus 91 ~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~--~~-----~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~ 162 (349)
T 3q7e_A 91 KVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEV--EL-----PVEKVDIIISEWMGYCLFYESMLNTVLHARDKW 162 (349)
T ss_dssp EEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTC--CC-----SSSCEEEEEECCCBBTBTBTCCHHHHHHHHHHH
T ss_pred EEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHc--cC-----CCCceEEEEEccccccccCchhHHHHHHHHHHh
Confidence 489999994 9999999999999988899999999875 22 2478999998752 23456778888899
Q ss_pred ccCCeEEEEeccc
Q 032390 75 LKVGGIAVYDNTL 87 (142)
Q Consensus 75 L~~gG~iv~dn~~ 87 (142)
|+|||+++.+...
T Consensus 163 LkpgG~li~~~~~ 175 (349)
T 3q7e_A 163 LAPDGLIFPDRAT 175 (349)
T ss_dssp EEEEEEEESCEEE
T ss_pred CCCCCEEccccce
Confidence 9999999865443
No 133
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=98.58 E-value=8.7e-08 Score=67.82 Aligned_cols=80 Identities=19% Similarity=0.234 Sum_probs=65.2
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC---cCcHHHHHHHHhcccC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK---DNYCNYHERLMKLLKV 77 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~---~~~~~~~~~~~~~L~~ 77 (142)
+|+++|+++++++.|++++...++. +++++.+|+.+.- + ..++||+|++.... .+...+++.+.+.|+|
T Consensus 64 ~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~--~-----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkp 135 (219)
T 3dh0_A 64 KVYAIDVQEEMVNYAWEKVNKLGLK-NVEVLKSEENKIP--L-----PDNTVDFIFMAFTFHELSEPLKFLEELKRVAKP 135 (219)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECBTTBCS--S-----CSSCEEEEEEESCGGGCSSHHHHHHHHHHHEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCC-cEEEEecccccCC--C-----CCCCeeEEEeehhhhhcCCHHHHHHHHHHHhCC
Confidence 4799999999999999999999886 7999999987641 1 25689999987542 2457889999999999
Q ss_pred CeEEEEecccc
Q 032390 78 GGIAVYDNTLW 88 (142)
Q Consensus 78 gG~iv~dn~~~ 88 (142)
||.+++.....
T Consensus 136 gG~l~i~~~~~ 146 (219)
T 3dh0_A 136 FAYLAIIDWKK 146 (219)
T ss_dssp EEEEEEEEECS
T ss_pred CeEEEEEEecc
Confidence 99999865443
No 134
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.57 E-value=1.4e-07 Score=69.13 Aligned_cols=80 Identities=26% Similarity=0.331 Sum_probs=65.0
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCC---CcCcHHHHHHHHhcccC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDAD---KDNYCNYHERLMKLLKV 77 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~---~~~~~~~~~~~~~~L~~ 77 (142)
+|+++|+++.+++.|++++...+.. +++++.+|+.+.. + +.++||+|++... .+....+++.+.+.|+|
T Consensus 63 ~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~--~-----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~p 134 (276)
T 3mgg_A 63 EITSIDISPESLEKARENTEKNGIK-NVKFLQANIFSLP--F-----EDSSFDHIFVCFVLEHLQSPEEALKSLKKVLKP 134 (276)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCGGGCC--S-----CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCC-CcEEEEcccccCC--C-----CCCCeeEEEEechhhhcCCHHHHHHHHHHHcCC
Confidence 4799999999999999999998885 7999999998642 1 2578999998653 23456889999999999
Q ss_pred CeEEEEecccc
Q 032390 78 GGIAVYDNTLW 88 (142)
Q Consensus 78 gG~iv~dn~~~ 88 (142)
||.+++.....
T Consensus 135 gG~l~~~~~~~ 145 (276)
T 3mgg_A 135 GGTITVIEGDH 145 (276)
T ss_dssp EEEEEEEEECG
T ss_pred CcEEEEEEcCC
Confidence 99998865433
No 135
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.57 E-value=1.2e-07 Score=68.34 Aligned_cols=73 Identities=22% Similarity=0.317 Sum_probs=58.1
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|+++|+++++++.|++++...++. +++++.+|+...++. ..+||+|+++....... +.+.+.|+|||.
T Consensus 116 ~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~-------~~~fD~Ii~~~~~~~~~---~~~~~~L~pgG~ 184 (235)
T 1jg1_A 116 DVYTIERIPELVEFAKRNLERAGVK-NVHVILGDGSKGFPP-------KAPYDVIIVTAGAPKIP---EPLIEQLKIGGK 184 (235)
T ss_dssp CEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGCCGG-------GCCEEEEEECSBBSSCC---HHHHHTEEEEEE
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCC-CcEEEECCcccCCCC-------CCCccEEEECCcHHHHH---HHHHHhcCCCcE
Confidence 5899999999999999999999886 499999998332221 34699999987654333 467889999999
Q ss_pred EEEe
Q 032390 81 AVYD 84 (142)
Q Consensus 81 iv~d 84 (142)
+++.
T Consensus 185 lvi~ 188 (235)
T 1jg1_A 185 LIIP 188 (235)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9875
No 136
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=98.57 E-value=5.5e-08 Score=71.53 Aligned_cols=75 Identities=17% Similarity=0.213 Sum_probs=62.3
Q ss_pred CEEEEeCChhHHHHHHHHHHHc-C-CCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCC
Q 032390 1 MITAIDVNRETYEIGLPIIKKA-G-VDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVG 78 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~-~-~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~g 78 (142)
+|+++|+++++++.|+++++.. | +.++++++.+|+.+.. + ..++||+|++|.+. ...+++.+.+.|+||
T Consensus 126 ~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~--~-----~~~~~D~v~~~~~~--~~~~l~~~~~~L~pg 196 (280)
T 1i9g_A 126 QVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSE--L-----PDGSVDRAVLDMLA--PWEVLDAVSRLLVAG 196 (280)
T ss_dssp EEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCC--C-----CTTCEEEEEEESSC--GGGGHHHHHHHEEEE
T ss_pred EEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcC--C-----CCCceeEEEECCcC--HHHHHHHHHHhCCCC
Confidence 4799999999999999999887 5 5568999999997741 1 24679999998763 457889999999999
Q ss_pred eEEEEe
Q 032390 79 GIAVYD 84 (142)
Q Consensus 79 G~iv~d 84 (142)
|.+++.
T Consensus 197 G~l~~~ 202 (280)
T 1i9g_A 197 GVLMVY 202 (280)
T ss_dssp EEEEEE
T ss_pred CEEEEE
Confidence 999874
No 137
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.56 E-value=4.6e-07 Score=76.28 Aligned_cols=125 Identities=13% Similarity=0.201 Sum_probs=82.2
Q ss_pred CEEEEeCChhHHHHHHHHHHHc------CCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC-----cHHHHH
Q 032390 1 MITAIDVNRETYEIGLPIIKKA------GVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN-----YCNYHE 69 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~------~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~-----~~~~~~ 69 (142)
+|+++|+++.+++.|+++++.. ++ .+++++++|+.++-. ..++||+|++...... ...+++
T Consensus 748 ~VtGVDIS~emLe~AReRLa~~lnAkr~gl-~nVefiqGDa~dLp~-------~d~sFDlVV~~eVLeHL~dp~l~~~L~ 819 (950)
T 3htx_A 748 TIIGVDISPKGLARAAKMLHVKLNKEACNV-KSATLYDGSILEFDS-------RLHDVDIGTCLEVIEHMEEDQACEFGE 819 (950)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHTTTTCSSC-SEEEEEESCTTSCCT-------TSCSCCEEEEESCGGGSCHHHHHHHHH
T ss_pred eEEEEECCHHHHHHHHHHhhhccchhhcCC-CceEEEECchHhCCc-------ccCCeeEEEEeCchhhCChHHHHHHHH
Confidence 4899999999999999987643 34 479999999987421 2478999998654322 234788
Q ss_pred HHHhcccCCeEEEEe-----cccccccc-----cCCCC-------CCCCCCCcchHHHHHHHHHHhhcCCCeeEEeeecC
Q 032390 70 RLMKLLKVGGIAVYD-----NTLWGGTV-----AVPEE-------QVPDHFRGSSRQAILDLNRSLADDPRVQLSHVALG 132 (142)
Q Consensus 70 ~~~~~L~~gG~iv~d-----n~~~~g~~-----~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~g 132 (142)
.+.+.|+||.+++.. |..+.+.. ..|.. ...+...- ....++.+.+.+....+|.+.+.++|
T Consensus 820 eI~RvLKPG~LIISTPN~eyN~lF~~Lnp~tr~~dPd~~~~~~fRh~DHrFEW-TReEFr~Wae~LAer~GYsVefvGVG 898 (950)
T 3htx_A 820 KVLSLFHPKLLIVSTPNYEFNTILQRSTPETQEENNSEPQLPKFRNHDHKFEW-TREQFNQWASKLGKRHNYSVEFSGVG 898 (950)
T ss_dssp HHHHTTCCSEEEEEECBGGGHHHHTCC------------CCSSCSCSSCSCCB-CHHHHHHHHHHHHHHTTEEEEEEEES
T ss_pred HHHHHcCCCEEEEEecCchhhhhhhhcccccccccccccccccccccCcceee-cHHHHHHHHHHHHHhcCcEEEEEccC
Confidence 899999999444432 22332210 00000 00111111 34567777777888899999999999
Q ss_pred ce
Q 032390 133 DG 134 (142)
Q Consensus 133 dG 134 (142)
+|
T Consensus 899 Dg 900 (950)
T 3htx_A 899 GS 900 (950)
T ss_dssp SC
T ss_pred CC
Confidence 98
No 138
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.56 E-value=1.9e-08 Score=73.21 Aligned_cols=59 Identities=14% Similarity=0.284 Sum_probs=46.0
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHH-HHHHHhhcccCCCceeEEEEcCCC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS-VLDQLLKYSENEGSFDYAFVDADK 61 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~-~l~~~~~~~~~~~~fD~IfiD~~~ 61 (142)
+|+++|+++.+++.|+++++..++.++++++++|+.+ ++..+.. ..+++||+|+++++.
T Consensus 91 ~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~--~~~~~fD~i~~npp~ 150 (254)
T 2h00_A 91 YFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKE--ESEIIYDFCMCNPPF 150 (254)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTT--CCSCCBSEEEECCCC
T ss_pred eEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhc--ccCCcccEEEECCCC
Confidence 4899999999999999999999998889999999865 2222210 001579999999763
No 139
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.56 E-value=9.5e-08 Score=67.57 Aligned_cols=73 Identities=21% Similarity=0.272 Sum_probs=59.2
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|+++|+++++++.|++++...++. +++++.+|+.+.++. .++||+|+++....... +.+.+.|+|||.
T Consensus 104 ~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~-------~~~fD~v~~~~~~~~~~---~~~~~~L~pgG~ 172 (215)
T 2yxe_A 104 LVVSIERIPELAEKAERTLRKLGYD-NVIVIVGDGTLGYEP-------LAPYDRIYTTAAGPKIP---EPLIRQLKDGGK 172 (215)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHTCT-TEEEEESCGGGCCGG-------GCCEEEEEESSBBSSCC---HHHHHTEEEEEE
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCC-CeEEEECCcccCCCC-------CCCeeEEEECCchHHHH---HHHHHHcCCCcE
Confidence 4899999999999999999998875 599999998653321 35799999987654433 577899999999
Q ss_pred EEEe
Q 032390 81 AVYD 84 (142)
Q Consensus 81 iv~d 84 (142)
+++.
T Consensus 173 lv~~ 176 (215)
T 2yxe_A 173 LLMP 176 (215)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9875
No 140
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.55 E-value=7e-08 Score=71.19 Aligned_cols=79 Identities=10% Similarity=0.078 Sum_probs=63.6
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC-------cCcHHHHHHHHh
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK-------DNYCNYHERLMK 73 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~-------~~~~~~~~~~~~ 73 (142)
+|+++|+++.+++.|++++...+...+++++.+|+.+. + +. ..++||+|++.... .....+++.+.+
T Consensus 89 ~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~-~~----~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~ 162 (298)
T 1ri5_A 89 EYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGR-H-MD----LGKEFDVISSQFSFHYAFSTSESLDIAQRNIAR 162 (298)
T ss_dssp EEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTS-C-CC----CSSCEEEEEEESCGGGGGSSHHHHHHHHHHHHH
T ss_pred EEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCcccc-c-cC----CCCCcCEEEECchhhhhcCCHHHHHHHHHHHHH
Confidence 47999999999999999999988877899999999764 1 10 15689999987542 234667888899
Q ss_pred cccCCeEEEEec
Q 032390 74 LLKVGGIAVYDN 85 (142)
Q Consensus 74 ~L~~gG~iv~dn 85 (142)
.|+|||.+++..
T Consensus 163 ~LkpgG~l~~~~ 174 (298)
T 1ri5_A 163 HLRPGGYFIMTV 174 (298)
T ss_dssp TEEEEEEEEEEE
T ss_pred hcCCCCEEEEEE
Confidence 999999998753
No 141
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.55 E-value=1.7e-07 Score=69.71 Aligned_cols=81 Identities=12% Similarity=0.113 Sum_probs=61.8
Q ss_pred CEEEEeCChhHHHHHHHHHHHc-CCCCcEEEEEccHHHHHHHHhh-cccCCCceeEEEEcCCCc--CcHHHHHHHHhccc
Q 032390 1 MITAIDVNRETYEIGLPIIKKA-GVDHKINFIESEALSVLDQLLK-YSENEGSFDYAFVDADKD--NYCNYHERLMKLLK 76 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~-~~~~~v~~~~~da~~~l~~~~~-~~~~~~~fD~IfiD~~~~--~~~~~~~~~~~~L~ 76 (142)
+|+++|+++.+++.|+++++.. +..++++++++|+.+.- +.. .....++||+|++..... ....+++.+.+.|+
T Consensus 63 ~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~~~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~Lk 140 (299)
T 3g5t_A 63 QIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFK--FLGADSVDKQKIDMITAVECAHWFDFEKFQRSAYANLR 140 (299)
T ss_dssp EEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCG--GGCTTTTTSSCEEEEEEESCGGGSCHHHHHHHHHHHEE
T ss_pred EEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCC--ccccccccCCCeeEEeHhhHHHHhCHHHHHHHHHHhcC
Confidence 4899999999999999999887 55678999999997642 110 000016899999865311 56788999999999
Q ss_pred CCeEEEE
Q 032390 77 VGGIAVY 83 (142)
Q Consensus 77 ~gG~iv~ 83 (142)
|||.+++
T Consensus 141 pgG~l~i 147 (299)
T 3g5t_A 141 KDGTIAI 147 (299)
T ss_dssp EEEEEEE
T ss_pred CCcEEEE
Confidence 9999987
No 142
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=98.55 E-value=1.2e-07 Score=68.98 Aligned_cols=78 Identities=14% Similarity=0.328 Sum_probs=62.9
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCC---CcCcHHHHHHHHhcccC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDAD---KDNYCNYHERLMKLLKV 77 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~---~~~~~~~~~~~~~~L~~ 77 (142)
+|+++|+++++++.|+++++..++. +++++.+|+.++ + + ++++||+|++... .++....++.+.+.|+|
T Consensus 61 ~v~gvD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~l-~-~-----~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~Lkp 132 (260)
T 1vl5_A 61 KVVAFDLTEDILKVARAFIEGNGHQ-QVEYVQGDAEQM-P-F-----TDERFHIVTCRIAAHHFPNPASFVSEAYRVLKK 132 (260)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCC-CC-C-S-----CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEE
T ss_pred EEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEecHHhC-C-C-----CCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCC
Confidence 4899999999999999999998875 799999998763 2 2 2478999998753 23457889999999999
Q ss_pred CeEEEEecc
Q 032390 78 GGIAVYDNT 86 (142)
Q Consensus 78 gG~iv~dn~ 86 (142)
||.+++...
T Consensus 133 gG~l~~~~~ 141 (260)
T 1vl5_A 133 GGQLLLVDN 141 (260)
T ss_dssp EEEEEEEEE
T ss_pred CCEEEEEEc
Confidence 999988533
No 143
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.54 E-value=5.2e-08 Score=69.79 Aligned_cols=74 Identities=14% Similarity=0.176 Sum_probs=59.2
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCC----CCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhccc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGV----DHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLK 76 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~----~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~ 76 (142)
+|+++|+++++++.|++++...+. .++++++.+|+.+.++. .++||+|++++.... +.+.+.+.|+
T Consensus 116 ~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-------~~~fD~I~~~~~~~~---~~~~~~~~Lk 185 (227)
T 1r18_A 116 RIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPP-------NAPYNAIHVGAAAPD---TPTELINQLA 185 (227)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGG-------GCSEEEEEECSCBSS---CCHHHHHTEE
T ss_pred EEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCc-------CCCccEEEECCchHH---HHHHHHHHhc
Confidence 389999999999999999988762 24799999999863221 368999999987543 3467889999
Q ss_pred CCeEEEEe
Q 032390 77 VGGIAVYD 84 (142)
Q Consensus 77 ~gG~iv~d 84 (142)
|||.+++.
T Consensus 186 pgG~lvi~ 193 (227)
T 1r18_A 186 SGGRLIVP 193 (227)
T ss_dssp EEEEEEEE
T ss_pred CCCEEEEE
Confidence 99999885
No 144
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.54 E-value=1.5e-07 Score=74.01 Aligned_cols=72 Identities=22% Similarity=0.223 Sum_probs=59.0
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHH-HHHHHHhcccCCe
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCN-YHERLMKLLKVGG 79 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~-~~~~~~~~L~~gG 79 (142)
+|+++|+++++++.|++|++.+|+. ++++.+|+.+++ ..+||+|++|++...+.. +++.+ ..|+|+|
T Consensus 314 ~V~gvD~s~~ai~~A~~n~~~ngl~--v~~~~~d~~~~~---------~~~fD~Vv~dPPr~g~~~~~~~~l-~~l~p~g 381 (425)
T 2jjq_A 314 NVKGFDSNEFAIEMARRNVEINNVD--AEFEVASDREVS---------VKGFDTVIVDPPRAGLHPRLVKRL-NREKPGV 381 (425)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHTCC--EEEEECCTTTCC---------CTTCSEEEECCCTTCSCHHHHHHH-HHHCCSE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChHHcC---------ccCCCEEEEcCCccchHHHHHHHH-HhcCCCc
Confidence 4899999999999999999999885 999999998753 237999999998655543 55555 4589999
Q ss_pred EEEEe
Q 032390 80 IAVYD 84 (142)
Q Consensus 80 ~iv~d 84 (142)
++++.
T Consensus 382 ivyvs 386 (425)
T 2jjq_A 382 IVYVS 386 (425)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 98774
No 145
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.53 E-value=2.2e-07 Score=64.57 Aligned_cols=75 Identities=12% Similarity=0.090 Sum_probs=61.2
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCC-----CcCcHHHHHHHHhcc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDAD-----KDNYCNYHERLMKLL 75 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~-----~~~~~~~~~~~~~~L 75 (142)
+++++|+++.+++.|++++...++. +++++.+|+.+.. ..++||+|++... ......+++.+.+.|
T Consensus 56 ~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~--------~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L 126 (199)
T 2xvm_A 56 DVDAWDKNAMSIANVERIKSIENLD-NLHTRVVDLNNLT--------FDRQYDFILSTVVLMFLEAKTIPGLIANMQRCT 126 (199)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECCGGGCC--------CCCCEEEEEEESCGGGSCGGGHHHHHHHHHHTE
T ss_pred eEEEEECCHHHHHHHHHHHHhCCCC-CcEEEEcchhhCC--------CCCCceEEEEcchhhhCCHHHHHHHHHHHHHhc
Confidence 4799999999999999999988874 6999999987641 1468999998753 224677899999999
Q ss_pred cCCeEEEEe
Q 032390 76 KVGGIAVYD 84 (142)
Q Consensus 76 ~~gG~iv~d 84 (142)
+|||.+++-
T Consensus 127 ~~gG~l~~~ 135 (199)
T 2xvm_A 127 KPGGYNLIV 135 (199)
T ss_dssp EEEEEEEEE
T ss_pred CCCeEEEEE
Confidence 999997653
No 146
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.53 E-value=1.1e-07 Score=68.10 Aligned_cols=74 Identities=19% Similarity=0.298 Sum_probs=59.3
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCC-------CcCcHHHHHHHHh
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDAD-------KDNYCNYHERLMK 73 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~-------~~~~~~~~~~~~~ 73 (142)
+|+++|+++.+++.|++++...+ .+++++.+|+.+.. + .++||+|++..+ ......+++.+.+
T Consensus 56 ~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~--~------~~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~ 125 (243)
T 3d2l_A 56 EVTGVDLSEEMLEIAQEKAMETN--RHVDFWVQDMRELE--L------PEPVDAITILCDSLNYLQTEADVKQTFDSAAR 125 (243)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCGGGCC--C------SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHH
T ss_pred eEEEEECCHHHHHHHHHhhhhcC--CceEEEEcChhhcC--C------CCCcCEEEEeCCchhhcCCHHHHHHHHHHHHH
Confidence 47999999999999999998876 46999999987641 1 468999998642 1234567888889
Q ss_pred cccCCeEEEEe
Q 032390 74 LLKVGGIAVYD 84 (142)
Q Consensus 74 ~L~~gG~iv~d 84 (142)
.|+|||.++++
T Consensus 126 ~L~pgG~l~~~ 136 (243)
T 3d2l_A 126 LLTDGGKLLFD 136 (243)
T ss_dssp HEEEEEEEEEE
T ss_pred hcCCCeEEEEE
Confidence 99999999974
No 147
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.53 E-value=5.8e-08 Score=70.00 Aligned_cols=78 Identities=13% Similarity=0.212 Sum_probs=60.9
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc-----CcHHHHHHHHhcc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD-----NYCNYHERLMKLL 75 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~-----~~~~~~~~~~~~L 75 (142)
+|+++|+++.+++.|++++...+ ..+++++.+|+.+.. . ..++||+|++..... .+..+++.+.+.|
T Consensus 104 ~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~~d~~~~~--~-----~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L 175 (241)
T 2ex4_A 104 EVDMVDITEDFLVQAKTYLGEEG-KRVRNYFCCGLQDFT--P-----EPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSL 175 (241)
T ss_dssp EEEEEESCHHHHHHHHHHTGGGG-GGEEEEEECCGGGCC--C-----CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHE
T ss_pred EEEEEeCCHHHHHHHHHHhhhcC-CceEEEEEcChhhcC--C-----CCCCEEEEEEcchhhhCCHHHHHHHHHHHHHhc
Confidence 47999999999999999987765 347999999987642 1 245899999985421 2457889999999
Q ss_pred cCCeEEEEecc
Q 032390 76 KVGGIAVYDNT 86 (142)
Q Consensus 76 ~~gG~iv~dn~ 86 (142)
+|||.+++...
T Consensus 176 kpgG~l~i~~~ 186 (241)
T 2ex4_A 176 RPNGIIVIKDN 186 (241)
T ss_dssp EEEEEEEEEEE
T ss_pred CCCeEEEEEEc
Confidence 99999987443
No 148
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.53 E-value=5.9e-08 Score=68.62 Aligned_cols=74 Identities=20% Similarity=0.259 Sum_probs=59.1
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC------cCcHHHHHHHHhc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK------DNYCNYHERLMKL 74 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~------~~~~~~~~~~~~~ 74 (142)
+|+++|+++.+++.|++++... .+++++.+|+.+.. ..++||+|++.... .....+++.+.+.
T Consensus 75 ~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~--------~~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~ 143 (216)
T 3ofk_A 75 RLTVIDVMPRAIGRACQRTKRW---SHISWAATDILQFS--------TAELFDLIVVAEVLYYLEDMTQMRTAIDNMVKM 143 (216)
T ss_dssp EEEEEESCHHHHHHHHHHTTTC---SSEEEEECCTTTCC--------CSCCEEEEEEESCGGGSSSHHHHHHHHHHHHHT
T ss_pred EEEEEECCHHHHHHHHHhcccC---CCeEEEEcchhhCC--------CCCCccEEEEccHHHhCCCHHHHHHHHHHHHHH
Confidence 4799999999999999988664 37999999998753 15789999996432 1224668899999
Q ss_pred ccCCeEEEEec
Q 032390 75 LKVGGIAVYDN 85 (142)
Q Consensus 75 L~~gG~iv~dn 85 (142)
|+|||.+++..
T Consensus 144 L~pgG~l~~~~ 154 (216)
T 3ofk_A 144 LAPGGHLVFGS 154 (216)
T ss_dssp EEEEEEEEEEE
T ss_pred cCCCCEEEEEe
Confidence 99999999854
No 149
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.52 E-value=1.2e-07 Score=73.57 Aligned_cols=79 Identities=13% Similarity=0.224 Sum_probs=63.2
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCC------CcCcHHHHHHHHhc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDAD------KDNYCNYHERLMKL 74 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~------~~~~~~~~~~~~~~ 74 (142)
+|++||.++ +++.|+++++.+|+.++|+++++++.++ .+ +++||+|+...- ......++....++
T Consensus 108 ~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~--~l------pe~~DvivsE~~~~~l~~e~~l~~~l~a~~r~ 178 (376)
T 4hc4_A 108 RVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETV--EL------PEQVDAIVSEWMGYGLLHESMLSSVLHARTKW 178 (376)
T ss_dssp EEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTC--CC------SSCEEEEECCCCBTTBTTTCSHHHHHHHHHHH
T ss_pred EEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeee--cC------CccccEEEeecccccccccchhhhHHHHHHhh
Confidence 489999996 8999999999999999999999999875 22 578999997531 12346677777799
Q ss_pred ccCCeEEEEecccc
Q 032390 75 LKVGGIAVYDNTLW 88 (142)
Q Consensus 75 L~~gG~iv~dn~~~ 88 (142)
|+|||+++.+.+..
T Consensus 179 Lkp~G~~iP~~atl 192 (376)
T 4hc4_A 179 LKEGGLLLPASAEL 192 (376)
T ss_dssp EEEEEEEESCEEEE
T ss_pred CCCCceECCccceE
Confidence 99999998765443
No 150
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=98.52 E-value=1e-07 Score=72.73 Aligned_cols=76 Identities=17% Similarity=0.159 Sum_probs=61.3
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCC------CcCcHHHHHHHHhc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDAD------KDNYCNYHERLMKL 74 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~------~~~~~~~~~~~~~~ 74 (142)
+|+++|+++ +++.|+++++..|+.++++++.+|+.++ .+ +.++||+|+++.. ......+++.+.+.
T Consensus 89 ~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~--~~-----~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~ 160 (340)
T 2fyt_A 89 KVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEV--HL-----PVEKVDVIISEWMGYFLLFESMLDSVLYAKNKY 160 (340)
T ss_dssp EEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTS--CC-----SCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHH
T ss_pred EEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHh--cC-----CCCcEEEEEEcCchhhccCHHHHHHHHHHHHhh
Confidence 489999997 9999999999999988999999999864 12 2468999998761 12245678888899
Q ss_pred ccCCeEEEEe
Q 032390 75 LKVGGIAVYD 84 (142)
Q Consensus 75 L~~gG~iv~d 84 (142)
|+|||.++.+
T Consensus 161 LkpgG~lip~ 170 (340)
T 2fyt_A 161 LAKGGSVYPD 170 (340)
T ss_dssp EEEEEEEESC
T ss_pred cCCCcEEEcc
Confidence 9999999854
No 151
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.52 E-value=1.9e-07 Score=72.13 Aligned_cols=75 Identities=24% Similarity=0.220 Sum_probs=59.2
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc-----------CcHHHHH
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD-----------NYCNYHE 69 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~-----------~~~~~~~ 69 (142)
+|+++|+|+.+++.|++|++..|+.++++++++|+.++. . ..++||+|++|++.. .|..+++
T Consensus 243 ~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~--~-----~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~ 315 (373)
T 3tm4_A 243 EIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLS--Q-----YVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFN 315 (373)
T ss_dssp CEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGG--G-----TCSCEEEEEEECCCC------CCHHHHHHHHHH
T ss_pred eEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCC--c-----ccCCcCEEEECCCCCcccCcchhHHHHHHHHHH
Confidence 489999999999999999999999889999999998852 1 246899999998732 1466777
Q ss_pred HHHhcccCCeEEEE
Q 032390 70 RLMKLLKVGGIAVY 83 (142)
Q Consensus 70 ~~~~~L~~gG~iv~ 83 (142)
.+.+.| +|+.+++
T Consensus 316 ~l~r~l-~g~~~~i 328 (373)
T 3tm4_A 316 ELAKVL-EKRGVFI 328 (373)
T ss_dssp HHHHHE-EEEEEEE
T ss_pred HHHHHc-CCeEEEE
Confidence 777877 4444433
No 152
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.51 E-value=2.2e-07 Score=67.12 Aligned_cols=75 Identities=19% Similarity=0.377 Sum_probs=60.0
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC------cCcHHHHHHHHhc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK------DNYCNYHERLMKL 74 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~------~~~~~~~~~~~~~ 74 (142)
+|+++|+|+.+++.|++++...+. +++++.+|+.+.. . .++||+|++.... .....+++.+.+.
T Consensus 65 ~v~gvD~s~~~l~~a~~~~~~~~~--~v~~~~~d~~~~~--~------~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~ 134 (252)
T 1wzn_A 65 EVVGLDLHEEMLRVARRKAKERNL--KIEFLQGDVLEIA--F------KNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEA 134 (252)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTC--CCEEEESCGGGCC--C------CSCEEEEEECSSGGGGSCHHHHHHHHHHHHHH
T ss_pred eEEEEECCHHHHHHHHHHHHhcCC--ceEEEECChhhcc--c------CCCccEEEEcCCchhcCCHHHHHHHHHHHHHH
Confidence 479999999999999999988775 6999999998641 1 4689999975321 2345678888899
Q ss_pred ccCCeEEEEec
Q 032390 75 LKVGGIAVYDN 85 (142)
Q Consensus 75 L~~gG~iv~dn 85 (142)
|+|||.++++.
T Consensus 135 L~pgG~li~~~ 145 (252)
T 1wzn_A 135 LKPGGVFITDF 145 (252)
T ss_dssp EEEEEEEEEEE
T ss_pred cCCCeEEEEec
Confidence 99999999763
No 153
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.51 E-value=2.2e-07 Score=73.09 Aligned_cols=79 Identities=13% Similarity=0.187 Sum_probs=61.9
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|+++|+++++++.|++|++.+++. +++++.+|+.+.++.+.. ..++||+|++|++.....+.++.+.+ ++|+++
T Consensus 310 ~V~gvD~s~~al~~A~~n~~~~~~~-~v~f~~~d~~~~l~~~~~---~~~~fD~Vv~dPPr~g~~~~~~~l~~-~~p~~i 384 (433)
T 1uwv_A 310 SVVGVEGVPALVEKGQQNARLNGLQ-NVTFYHENLEEDVTKQPW---AKNGFDKVLLDPARAGAAGVMQQIIK-LEPIRI 384 (433)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCTTSCCSSSGG---GTTCCSEEEECCCTTCCHHHHHHHHH-HCCSEE
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEECCHHHHhhhhhh---hcCCCCEEEECCCCccHHHHHHHHHh-cCCCeE
Confidence 4899999999999999999999986 899999999875433100 14579999999998766666665543 688888
Q ss_pred EEEe
Q 032390 81 AVYD 84 (142)
Q Consensus 81 iv~d 84 (142)
+.+.
T Consensus 385 vyvs 388 (433)
T 1uwv_A 385 VYVS 388 (433)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7653
No 154
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.51 E-value=1e-07 Score=67.63 Aligned_cols=77 Identities=16% Similarity=0.273 Sum_probs=61.5
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCC--Cc---CcHHHHHHHHhcc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDAD--KD---NYCNYHERLMKLL 75 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~--~~---~~~~~~~~~~~~L 75 (142)
+++++|+++++++.|+++++..+ .+++++.+|+.+. + + +.++||+|++... .. ....+++.+.+.|
T Consensus 62 ~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~-~-~-----~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L 132 (227)
T 1ve3_A 62 EVVGVDISEDMIRKAREYAKSRE--SNVEFIVGDARKL-S-F-----EDKTFDYVIFIDSIVHFEPLELNQVFKEVRRVL 132 (227)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCTTSC-C-S-----CTTCEEEEEEESCGGGCCHHHHHHHHHHHHHHE
T ss_pred EEEEEECCHHHHHHHHHHHHhcC--CCceEEECchhcC-C-C-----CCCcEEEEEEcCchHhCCHHHHHHHHHHHHHHc
Confidence 47999999999999999998876 5799999998763 1 1 2468999998765 22 3456788899999
Q ss_pred cCCeEEEEecc
Q 032390 76 KVGGIAVYDNT 86 (142)
Q Consensus 76 ~~gG~iv~dn~ 86 (142)
+|||.+++...
T Consensus 133 ~~gG~l~~~~~ 143 (227)
T 1ve3_A 133 KPSGKFIMYFT 143 (227)
T ss_dssp EEEEEEEEEEE
T ss_pred CCCcEEEEEec
Confidence 99999987543
No 155
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=98.50 E-value=2.1e-07 Score=67.06 Aligned_cols=78 Identities=18% Similarity=0.286 Sum_probs=63.6
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC---cCcHHHHHHHHhcccC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK---DNYCNYHERLMKLLKV 77 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~---~~~~~~~~~~~~~L~~ 77 (142)
+|+++|+++.+++.|++++...++. +++++.+|+.++ + + .+++||+|++.... .+...+++.+.+.|+|
T Consensus 45 ~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~-~-~-----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkp 116 (239)
T 1xxl_A 45 ECIGVDATKEMVEVASSFAQEKGVE-NVRFQQGTAESL-P-F-----PDDSFDIITCRYAAHHFSDVRKAVREVARVLKQ 116 (239)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHTCC-SEEEEECBTTBC-C-S-----CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCC-CeEEEecccccC-C-C-----CCCcEEEEEECCchhhccCHHHHHHHHHHHcCC
Confidence 4799999999999999999998875 799999998763 2 1 24689999987532 3467889999999999
Q ss_pred CeEEEEecc
Q 032390 78 GGIAVYDNT 86 (142)
Q Consensus 78 gG~iv~dn~ 86 (142)
||.+++.+.
T Consensus 117 gG~l~~~~~ 125 (239)
T 1xxl_A 117 DGRFLLVDH 125 (239)
T ss_dssp EEEEEEEEE
T ss_pred CcEEEEEEc
Confidence 999988544
No 156
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.50 E-value=1.5e-07 Score=71.91 Aligned_cols=75 Identities=16% Similarity=0.153 Sum_probs=61.5
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCC-----CcCcHHHHHHHHhcc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDAD-----KDNYCNYHERLMKLL 75 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~-----~~~~~~~~~~~~~~L 75 (142)
+|+++|.++ +++.|+++++..|+.++++++.+|+.++ .+ +++||+|++... ...+...+..+.++|
T Consensus 75 ~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~--~~------~~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~L 145 (348)
T 2y1w_A 75 KIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEV--SL------PEQVDIIISEPMGYMLFNERMLESYLHAKKYL 145 (348)
T ss_dssp EEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTC--CC------SSCEEEEEECCCBTTBTTTSHHHHHHHGGGGE
T ss_pred EEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhC--CC------CCceeEEEEeCchhcCChHHHHHHHHHHHhhc
Confidence 489999996 8899999999999988999999999764 11 468999999853 234567777888999
Q ss_pred cCCeEEEEe
Q 032390 76 KVGGIAVYD 84 (142)
Q Consensus 76 ~~gG~iv~d 84 (142)
+|||.++..
T Consensus 146 kpgG~li~~ 154 (348)
T 2y1w_A 146 KPSGNMFPT 154 (348)
T ss_dssp EEEEEEESC
T ss_pred CCCeEEEEe
Confidence 999999854
No 157
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.49 E-value=1.6e-07 Score=71.28 Aligned_cols=76 Identities=16% Similarity=0.176 Sum_probs=61.6
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCC------CcCcHHHHHHHHhc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDAD------KDNYCNYHERLMKL 74 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~------~~~~~~~~~~~~~~ 74 (142)
+|+++|++ .+++.|+++++..++.++++++.+|+.++- + +.++||+|+++.. ......++..+.++
T Consensus 63 ~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~-----~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~ 134 (328)
T 1g6q_1 63 HVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVH--L-----PFPKVDIIISEWMGYFLLYESMMDTVLYARDHY 134 (328)
T ss_dssp EEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSC--C-----SSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHH
T ss_pred EEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhcc--C-----CCCcccEEEEeCchhhcccHHHHHHHHHHHHhh
Confidence 48999999 599999999999999889999999997741 1 2368999998752 12345678888899
Q ss_pred ccCCeEEEEe
Q 032390 75 LKVGGIAVYD 84 (142)
Q Consensus 75 L~~gG~iv~d 84 (142)
|+|||.++.+
T Consensus 135 LkpgG~li~~ 144 (328)
T 1g6q_1 135 LVEGGLIFPD 144 (328)
T ss_dssp EEEEEEEESC
T ss_pred cCCCeEEEEe
Confidence 9999999854
No 158
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.49 E-value=1.4e-07 Score=67.78 Aligned_cols=77 Identities=16% Similarity=0.062 Sum_probs=59.2
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc-CcHHHHHHHHhcccCCe
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD-NYCNYHERLMKLLKVGG 79 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~-~~~~~~~~~~~~L~~gG 79 (142)
+|+++|+++++++.|+++.+.. ++++++.+|+.+....+. ..++||+|+.|.+.+ ....+++.+.+.|+|||
T Consensus 100 ~v~gvD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~~~~----~~~~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG 172 (230)
T 1fbn_A 100 IVYAIEYAPRIMRELLDACAER---ENIIPILGDANKPQEYAN----IVEKVDVIYEDVAQPNQAEILIKNAKWFLKKGG 172 (230)
T ss_dssp EEEEEESCHHHHHHHHHHTTTC---TTEEEEECCTTCGGGGTT----TSCCEEEEEECCCSTTHHHHHHHHHHHHEEEEE
T ss_pred EEEEEECCHHHHHHHHHHhhcC---CCeEEEECCCCCcccccc----cCccEEEEEEecCChhHHHHHHHHHHHhCCCCc
Confidence 4899999999999999987654 579999999876211010 136899999886432 33667999999999999
Q ss_pred EEEEe
Q 032390 80 IAVYD 84 (142)
Q Consensus 80 ~iv~d 84 (142)
.+++.
T Consensus 173 ~l~i~ 177 (230)
T 1fbn_A 173 YGMIA 177 (230)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99885
No 159
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.48 E-value=2.1e-07 Score=68.89 Aligned_cols=77 Identities=16% Similarity=0.178 Sum_probs=63.1
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCC---CcCcHHHHHHHHhcccC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDAD---KDNYCNYHERLMKLLKV 77 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~---~~~~~~~~~~~~~~L~~ 77 (142)
+|+++|+++.+++.|++++...+. +++++.+|+.++. .+++||+|++... .++...+++.+.+.|+|
T Consensus 49 ~v~gvD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~--------~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkp 118 (284)
T 3gu3_A 49 KYTGIDSGETLLAEARELFRLLPY--DSEFLEGDATEIE--------LNDKYDIAICHAFLLHMTTPETMLQKMIHSVKK 118 (284)
T ss_dssp EEEEEESCHHHHHHHHHHHHSSSS--EEEEEESCTTTCC--------CSSCEEEEEEESCGGGCSSHHHHHHHHHHTEEE
T ss_pred EEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcchhhcC--------cCCCeeEEEECChhhcCCCHHHHHHHHHHHcCC
Confidence 479999999999999999987765 7999999998641 1468999999764 23457889999999999
Q ss_pred CeEEEEeccc
Q 032390 78 GGIAVYDNTL 87 (142)
Q Consensus 78 gG~iv~dn~~ 87 (142)
||.+++....
T Consensus 119 gG~l~~~~~~ 128 (284)
T 3gu3_A 119 GGKIICFEPH 128 (284)
T ss_dssp EEEEEEEECC
T ss_pred CCEEEEEecc
Confidence 9999876544
No 160
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.47 E-value=9e-08 Score=71.23 Aligned_cols=79 Identities=11% Similarity=0.201 Sum_probs=62.3
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCC--CcEEEEEccHHHHHHHHhhcccCCCceeEEEEcC------CCcCcHHHHHHHH
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVD--HKINFIESEALSVLDQLLKYSENEGSFDYAFVDA------DKDNYCNYHERLM 72 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~--~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~------~~~~~~~~~~~~~ 72 (142)
+|+++|+++.+++.|++++...+.. .+++++.+|+.++ + .+++||+|++.. +......+++.+.
T Consensus 106 ~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~-~-------~~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~ 177 (299)
T 3g2m_A 106 EVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAF-A-------LDKRFGTVVISSGSINELDEADRRGLYASVR 177 (299)
T ss_dssp CEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBC-C-------CSCCEEEEEECHHHHTTSCHHHHHHHHHHHH
T ss_pred eEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcC-C-------cCCCcCEEEECCcccccCCHHHHHHHHHHHH
Confidence 5899999999999999999887642 5899999999874 1 156899998642 1112467889999
Q ss_pred hcccCCeEEEEeccc
Q 032390 73 KLLKVGGIAVYDNTL 87 (142)
Q Consensus 73 ~~L~~gG~iv~dn~~ 87 (142)
+.|+|||.+++....
T Consensus 178 ~~L~pgG~l~~~~~~ 192 (299)
T 3g2m_A 178 EHLEPGGKFLLSLAM 192 (299)
T ss_dssp HHEEEEEEEEEEEEC
T ss_pred HHcCCCcEEEEEeec
Confidence 999999999986544
No 161
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=98.46 E-value=2e-07 Score=69.44 Aligned_cols=77 Identities=14% Similarity=0.193 Sum_probs=61.1
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc---CcHHHHHHHHh--cc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD---NYCNYHERLMK--LL 75 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~---~~~~~~~~~~~--~L 75 (142)
+++++|.+++.++..++|++. .++++++++|+.+.+..+.. +..+||+||+||+.. .|...++.+.+ .+
T Consensus 115 ~~vfvE~~~~a~~~L~~Nl~~---~~~~~V~~~D~~~~L~~l~~---~~~~fdLVfiDPPYe~k~~~~~vl~~L~~~~~r 188 (283)
T 2oo3_A 115 RLYLCELHPTEYNFLLKLPHF---NKKVYVNHTDGVSKLNALLP---PPEKRGLIFIDPSYERKEEYKEIPYAIKNAYSK 188 (283)
T ss_dssp EEEEECCSHHHHHHHTTSCCT---TSCEEEECSCHHHHHHHHCS---CTTSCEEEEECCCCCSTTHHHHHHHHHHHHHHH
T ss_pred eEEEEeCCHHHHHHHHHHhCc---CCcEEEEeCcHHHHHHHhcC---CCCCccEEEECCCCCCCcHHHHHHHHHHHhCcc
Confidence 478999999999999999965 46899999999998887631 235799999999854 45666666654 56
Q ss_pred cCCeEEEE
Q 032390 76 KVGGIAVY 83 (142)
Q Consensus 76 ~~gG~iv~ 83 (142)
.++|++++
T Consensus 189 ~~~Gi~v~ 196 (283)
T 2oo3_A 189 FSTGLYCV 196 (283)
T ss_dssp CTTSEEEE
T ss_pred CCCeEEEE
Confidence 78999865
No 162
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.46 E-value=1.9e-07 Score=66.79 Aligned_cols=74 Identities=19% Similarity=0.301 Sum_probs=60.2
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcC-CC------cCcHHHHHHHHh
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDA-DK------DNYCNYHERLMK 73 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~-~~------~~~~~~~~~~~~ 73 (142)
+++++|+++.+++.|++++...+. +++++.+|+.+.. + .++||+|++.. .. .....+++.+.+
T Consensus 61 ~~~~~D~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~--~------~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~ 130 (246)
T 1y8c_A 61 NTWAVDLSQEMLSEAENKFRSQGL--KPRLACQDISNLN--I------NRKFDLITCCLDSTNYIIDSDDLKKYFKAVSN 130 (246)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTC--CCEEECCCGGGCC--C------SCCEEEEEECTTGGGGCCSHHHHHHHHHHHHT
T ss_pred cEEEEECCHHHHHHHHHHHhhcCC--CeEEEecccccCC--c------cCCceEEEEcCccccccCCHHHHHHHHHHHHH
Confidence 479999999999999999988775 6999999987641 1 36899999965 21 335677888899
Q ss_pred cccCCeEEEEe
Q 032390 74 LLKVGGIAVYD 84 (142)
Q Consensus 74 ~L~~gG~iv~d 84 (142)
.|+|||.++++
T Consensus 131 ~L~pgG~l~~~ 141 (246)
T 1y8c_A 131 HLKEGGVFIFD 141 (246)
T ss_dssp TEEEEEEEEEE
T ss_pred hcCCCcEEEEE
Confidence 99999999984
No 163
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.46 E-value=1.2e-07 Score=75.55 Aligned_cols=75 Identities=16% Similarity=0.153 Sum_probs=60.6
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCC-----CcCcHHHHHHHHhcc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDAD-----KDNYCNYHERLMKLL 75 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~-----~~~~~~~~~~~~~~L 75 (142)
+|+++|+++ +++.|+++++..|+.++++++.+|+.++ .+ .++||+|++++. ...+...+..+.+.|
T Consensus 183 ~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~--~~------~~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~L 253 (480)
T 3b3j_A 183 KIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEV--SL------PEQVDIIISEPMGYMLFNERMLESYLHAKKYL 253 (480)
T ss_dssp EEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTC--CC------SSCEEEEECCCCHHHHTCHHHHHHHHHGGGGE
T ss_pred EEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhC--cc------CCCeEEEEEeCchHhcCcHHHHHHHHHHHHhc
Confidence 489999998 9999999999999988999999999764 11 468999999764 123455566677899
Q ss_pred cCCeEEEEe
Q 032390 76 KVGGIAVYD 84 (142)
Q Consensus 76 ~~gG~iv~d 84 (142)
+|||.++..
T Consensus 254 kpgG~li~~ 262 (480)
T 3b3j_A 254 KPSGNMFPT 262 (480)
T ss_dssp EEEEEEESC
T ss_pred CCCCEEEEE
Confidence 999999854
No 164
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.45 E-value=1.8e-07 Score=66.81 Aligned_cols=71 Identities=18% Similarity=0.306 Sum_probs=57.3
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|+++|+++++++.|++++...+ +++++.+|+.+.++. .++||+|+++....... +.+.+.|+|||.
T Consensus 94 ~v~~vD~~~~~~~~a~~~~~~~~---~v~~~~~d~~~~~~~-------~~~fD~v~~~~~~~~~~---~~~~~~L~pgG~ 160 (231)
T 1vbf_A 94 KVVSVEINEKMYNYASKLLSYYN---NIKLILGDGTLGYEE-------EKPYDRVVVWATAPTLL---CKPYEQLKEGGI 160 (231)
T ss_dssp EEEEEESCHHHHHHHHHHHTTCS---SEEEEESCGGGCCGG-------GCCEEEEEESSBBSSCC---HHHHHTEEEEEE
T ss_pred EEEEEeCCHHHHHHHHHHHhhcC---CeEEEECCccccccc-------CCCccEEEECCcHHHHH---HHHHHHcCCCcE
Confidence 48999999999999999997765 799999999873221 46899999987654332 467889999999
Q ss_pred EEEe
Q 032390 81 AVYD 84 (142)
Q Consensus 81 iv~d 84 (142)
+++.
T Consensus 161 l~~~ 164 (231)
T 1vbf_A 161 MILP 164 (231)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9875
No 165
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.44 E-value=3.8e-07 Score=65.62 Aligned_cols=72 Identities=14% Similarity=0.189 Sum_probs=58.8
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCC-----CcCcHHHHHHHHhcc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDAD-----KDNYCNYHERLMKLL 75 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~-----~~~~~~~~~~~~~~L 75 (142)
+|+++|+|+++++.|+++ ++++.+|+.+.+..+ ++++||+|++... .+.+..+++.+.+.|
T Consensus 65 ~v~gvD~s~~~~~~a~~~---------~~~~~~d~~~~~~~~-----~~~~fD~i~~~~~l~~~~~~~~~~~l~~~~~~L 130 (240)
T 3dli_A 65 ESIGVDINEDMIKFCEGK---------FNVVKSDAIEYLKSL-----PDKYLDGVMISHFVEHLDPERLFELLSLCYSKM 130 (240)
T ss_dssp CEEEECSCHHHHHHHHTT---------SEEECSCHHHHHHTS-----CTTCBSEEEEESCGGGSCGGGHHHHHHHHHHHB
T ss_pred cEEEEECCHHHHHHHHhh---------cceeeccHHHHhhhc-----CCCCeeEEEECCchhhCCcHHHHHHHHHHHHHc
Confidence 589999999999999875 789999999876544 2578999998643 224578999999999
Q ss_pred cCCeEEEEecc
Q 032390 76 KVGGIAVYDNT 86 (142)
Q Consensus 76 ~~gG~iv~dn~ 86 (142)
+|||.+++...
T Consensus 131 kpgG~l~~~~~ 141 (240)
T 3dli_A 131 KYSSYIVIESP 141 (240)
T ss_dssp CTTCCEEEEEE
T ss_pred CCCcEEEEEeC
Confidence 99999988644
No 166
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=98.43 E-value=1.5e-07 Score=67.31 Aligned_cols=76 Identities=18% Similarity=0.236 Sum_probs=59.6
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC-----cHHHHHHHHhcc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN-----YCNYHERLMKLL 75 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~-----~~~~~~~~~~~L 75 (142)
+++++|+++.+++.|++++...+ +++++.+|+.+.. ..++||+|++...... ...+++.+.+.|
T Consensus 70 ~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~--------~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L 138 (234)
T 3dtn_A 70 TFTLVDMSEKMLEIAKNRFRGNL---KVKYIEADYSKYD--------FEEKYDMVVSALSIHHLEDEDKKELYKRSYSIL 138 (234)
T ss_dssp EEEEEESCHHHHHHHHHHTCSCT---TEEEEESCTTTCC--------CCSCEEEEEEESCGGGSCHHHHHHHHHHHHHHE
T ss_pred eEEEEECCHHHHHHHHHhhccCC---CEEEEeCchhccC--------CCCCceEEEEeCccccCCHHHHHHHHHHHHHhc
Confidence 47999999999999999886554 7999999997641 1368999999764221 224789999999
Q ss_pred cCCeEEEEeccc
Q 032390 76 KVGGIAVYDNTL 87 (142)
Q Consensus 76 ~~gG~iv~dn~~ 87 (142)
+|||.+++.+..
T Consensus 139 kpgG~l~~~~~~ 150 (234)
T 3dtn_A 139 KESGIFINADLV 150 (234)
T ss_dssp EEEEEEEEEEEC
T ss_pred CCCcEEEEEEec
Confidence 999999876543
No 167
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=98.42 E-value=5.5e-07 Score=64.63 Aligned_cols=75 Identities=17% Similarity=0.147 Sum_probs=58.3
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHH--HHHhhcccCCCceeEEEEcCCCcCc-HHHHHHHHhcccC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVL--DQLLKYSENEGSFDYAFVDADKDNY-CNYHERLMKLLKV 77 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l--~~~~~~~~~~~~fD~IfiD~~~~~~-~~~~~~~~~~L~~ 77 (142)
+|+++|+++.+++.+.++.+.. .+++++.+|+.+.. +.. .++||+|++|.+.... ..++..+.+.|+|
T Consensus 104 ~v~gvD~s~~~i~~~~~~a~~~---~~v~~~~~d~~~~~~~~~~------~~~~D~V~~~~~~~~~~~~~~~~~~~~Lkp 174 (233)
T 2ipx_A 104 LVYAVEFSHRSGRDLINLAKKR---TNIIPVIEDARHPHKYRML------IAMVDVIFADVAQPDQTRIVALNAHTFLRN 174 (233)
T ss_dssp EEEEECCCHHHHHHHHHHHHHC---TTEEEECSCTTCGGGGGGG------CCCEEEEEECCCCTTHHHHHHHHHHHHEEE
T ss_pred EEEEEECCHHHHHHHHHHhhcc---CCeEEEEcccCChhhhccc------CCcEEEEEEcCCCccHHHHHHHHHHHHcCC
Confidence 4899999999888888877765 57999999997632 211 5689999999874322 3457778999999
Q ss_pred CeEEEEe
Q 032390 78 GGIAVYD 84 (142)
Q Consensus 78 gG~iv~d 84 (142)
||.+++.
T Consensus 175 gG~l~i~ 181 (233)
T 2ipx_A 175 GGHFVIS 181 (233)
T ss_dssp EEEEEEE
T ss_pred CeEEEEE
Confidence 9999984
No 168
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.42 E-value=3.7e-07 Score=63.81 Aligned_cols=78 Identities=17% Similarity=0.195 Sum_probs=61.7
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC---cCcHHHHHHHHhcccC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK---DNYCNYHERLMKLLKV 77 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~---~~~~~~~~~~~~~L~~ 77 (142)
+|+++|+++.+++.|++++...+. +++++.+|+.+. + + +.++||+|++.... .....+++.+.+.|+|
T Consensus 53 ~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~-~-~-----~~~~fD~v~~~~~~~~~~~~~~~l~~~~~~L~p 123 (202)
T 2kw5_A 53 EVTAVDQSSVGLAKAKQLAQEKGV--KITTVQSNLADF-D-I-----VADAWEGIVSIFCHLPSSLRQQLYPKVYQGLKP 123 (202)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHTC--CEEEECCBTTTB-S-C-----CTTTCSEEEEECCCCCHHHHHHHHHHHHTTCCS
T ss_pred eEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcChhhc-C-C-----CcCCccEEEEEhhcCCHHHHHHHHHHHHHhcCC
Confidence 479999999999999999988876 699999998764 1 1 24689999985321 2346778889999999
Q ss_pred CeEEEEeccc
Q 032390 78 GGIAVYDNTL 87 (142)
Q Consensus 78 gG~iv~dn~~ 87 (142)
||.+++....
T Consensus 124 gG~l~~~~~~ 133 (202)
T 2kw5_A 124 GGVFILEGFA 133 (202)
T ss_dssp SEEEEEEEEC
T ss_pred CcEEEEEEec
Confidence 9999986543
No 169
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.42 E-value=2.6e-07 Score=64.82 Aligned_cols=78 Identities=12% Similarity=0.233 Sum_probs=61.5
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC-----cCcHHHHHHHHhcc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK-----DNYCNYHERLMKLL 75 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~-----~~~~~~~~~~~~~L 75 (142)
+|+++|+|+++++.|++++...+ .+++++.+|+.+. + + ++++||+|++.... .....+++.+.+.|
T Consensus 48 ~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~-~-~-----~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L 118 (209)
T 2p8j_A 48 KTYGIEISDLQLKKAENFSRENN--FKLNISKGDIRKL-P-F-----KDESMSFVYSYGTIFHMRKNDVKEAIDEIKRVL 118 (209)
T ss_dssp EEEEEECCHHHHHHHHHHHHHHT--CCCCEEECCTTSC-C-S-----CTTCEEEEEECSCGGGSCHHHHHHHHHHHHHHE
T ss_pred EEEEEECCHHHHHHHHHHHHhcC--CceEEEECchhhC-C-C-----CCCceeEEEEcChHHhCCHHHHHHHHHHHHHHc
Confidence 47999999999999999998876 3689999998763 1 1 24689999985431 33567788889999
Q ss_pred cCCeEEEEeccc
Q 032390 76 KVGGIAVYDNTL 87 (142)
Q Consensus 76 ~~gG~iv~dn~~ 87 (142)
+|||.+++....
T Consensus 119 kpgG~l~~~~~~ 130 (209)
T 2p8j_A 119 KPGGLACINFLT 130 (209)
T ss_dssp EEEEEEEEEEEE
T ss_pred CCCcEEEEEEec
Confidence 999999986543
No 170
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.42 E-value=6.6e-07 Score=70.16 Aligned_cols=83 Identities=12% Similarity=-0.013 Sum_probs=60.7
Q ss_pred CEEEEeCChhHHHHHHHHH-------HHcCCC-CcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC--cCcHHHHHH
Q 032390 1 MITAIDVNRETYEIGLPII-------KKAGVD-HKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK--DNYCNYHER 70 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~-------~~~~~~-~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~--~~~~~~~~~ 70 (142)
+|++||+++.+++.|+++. +..|+. .+|++++||+.+.--... -..||+||+.... +.....+..
T Consensus 199 kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~d~-----~~~aDVVf~Nn~~F~pdl~~aL~E 273 (438)
T 3uwp_A 199 HHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRER-----IANTSVIFVNNFAFGPEVDHQLKE 273 (438)
T ss_dssp EEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHHHH-----HHTCSEEEECCTTCCHHHHHHHHH
T ss_pred EEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCccccc-----cCCccEEEEcccccCchHHHHHHH
Confidence 3899999999999999875 345663 689999999977421100 1369999997642 234556677
Q ss_pred HHhcccCCeEEEEecccc
Q 032390 71 LMKLLKVGGIAVYDNTLW 88 (142)
Q Consensus 71 ~~~~L~~gG~iv~dn~~~ 88 (142)
+.+.|+|||.||+...+.
T Consensus 274 i~RvLKPGGrIVssE~f~ 291 (438)
T 3uwp_A 274 RFANMKEGGRIVSSKPFA 291 (438)
T ss_dssp HHTTSCTTCEEEESSCSS
T ss_pred HHHcCCCCcEEEEeeccc
Confidence 788999999999865554
No 171
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.41 E-value=4.6e-07 Score=70.56 Aligned_cols=53 Identities=17% Similarity=0.208 Sum_probs=47.1
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK 61 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~ 61 (142)
+|+++|+|+.+++.|++|++.+|+.++++++++|+.+.. ...+||+|++|||.
T Consensus 265 ~V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~--------~~~~fD~Iv~NPPY 317 (393)
T 3k0b_A 265 NIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQ--------TEDEYGVVVANPPY 317 (393)
T ss_dssp CEEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCC--------CCCCSCEEEECCCC
T ss_pred eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCC--------CCCCCCEEEECCCC
Confidence 389999999999999999999999888999999998752 14589999999985
No 172
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.41 E-value=7.2e-07 Score=70.30 Aligned_cols=82 Identities=13% Similarity=0.189 Sum_probs=62.3
Q ss_pred CEEEEeCChhHHHHH-------HHHHHHcCCC-CcEEEEEccHHHH---HHHHhhcccCCCceeEEEEcCC--CcCcHHH
Q 032390 1 MITAIDVNRETYEIG-------LPIIKKAGVD-HKINFIESEALSV---LDQLLKYSENEGSFDYAFVDAD--KDNYCNY 67 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a-------~~~~~~~~~~-~~v~~~~~da~~~---l~~~~~~~~~~~~fD~IfiD~~--~~~~~~~ 67 (142)
+|++||+++.+++.| +++++..|+. .+++++++|.... ++.. .++||+|++... .+.....
T Consensus 268 ~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~~~------~~~FDvIvvn~~l~~~d~~~~ 341 (433)
T 1u2z_A 268 LSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVAEL------IPQCDVILVNNFLFDEDLNKK 341 (433)
T ss_dssp EEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHHHH------GGGCSEEEECCTTCCHHHHHH
T ss_pred EEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccccccccccc------cCCCCEEEEeCccccccHHHH
Confidence 389999999999999 9999998854 6899999865421 2221 357999998632 2345667
Q ss_pred HHHHHhcccCCeEEEEecccc
Q 032390 68 HERLMKLLKVGGIAVYDNTLW 88 (142)
Q Consensus 68 ~~~~~~~L~~gG~iv~dn~~~ 88 (142)
+..+.+.|+|||.+++.+.+.
T Consensus 342 L~el~r~LKpGG~lVi~d~f~ 362 (433)
T 1u2z_A 342 VEKILQTAKVGCKIISLKSLR 362 (433)
T ss_dssp HHHHHTTCCTTCEEEESSCSS
T ss_pred HHHHHHhCCCCeEEEEeeccC
Confidence 788899999999999876553
No 173
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.41 E-value=5.3e-07 Score=68.69 Aligned_cols=73 Identities=19% Similarity=0.218 Sum_probs=59.7
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc--------CcHHHHHHHH
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD--------NYCNYHERLM 72 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~--------~~~~~~~~~~ 72 (142)
+|+++|+|+.+++.|++++...++. ++++.+|+.+.. .++||+|+++++.. ....+++.+.
T Consensus 222 ~v~~vD~s~~~l~~a~~~~~~~~~~--~~~~~~d~~~~~---------~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~ 290 (343)
T 2pjd_A 222 RLTLCDVSAPAVEASRATLAANGVE--GEVFASNVFSEV---------KGRFDMIISNPPFHDGMQTSLDAAQTLIRGAV 290 (343)
T ss_dssp BCEEEESBHHHHHHHHHHHHHTTCC--CEEEECSTTTTC---------CSCEEEEEECCCCCSSSHHHHHHHHHHHHHHG
T ss_pred EEEEEECCHHHHHHHHHHHHHhCCC--CEEEEccccccc---------cCCeeEEEECCCcccCccCCHHHHHHHHHHHH
Confidence 4799999999999999999998874 677899987531 46899999987643 1356788889
Q ss_pred hcccCCeEEEEe
Q 032390 73 KLLKVGGIAVYD 84 (142)
Q Consensus 73 ~~L~~gG~iv~d 84 (142)
+.|+|||.+++-
T Consensus 291 ~~LkpgG~l~i~ 302 (343)
T 2pjd_A 291 RHLNSGGELRIV 302 (343)
T ss_dssp GGEEEEEEEEEE
T ss_pred HhCCCCcEEEEE
Confidence 999999998874
No 174
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.40 E-value=6.7e-07 Score=62.53 Aligned_cols=73 Identities=8% Similarity=0.005 Sum_probs=58.9
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCC-----CcCcHHHHHHHHhcc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDAD-----KDNYCNYHERLMKLL 75 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~-----~~~~~~~~~~~~~~L 75 (142)
+|+++|+++.+++.|+++. .+++++.+|+.++ + + ..++||+|++... ......+++.+.+.|
T Consensus 65 ~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~-~-~-----~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L 131 (203)
T 3h2b_A 65 QIEGLEPATRLVELARQTH------PSVTFHHGTITDL-S-D-----SPKRWAGLLAWYSLIHMGPGELPDALVALRMAV 131 (203)
T ss_dssp CEEEECCCHHHHHHHHHHC------TTSEEECCCGGGG-G-G-----SCCCEEEEEEESSSTTCCTTTHHHHHHHHHHTE
T ss_pred eEEEEeCCHHHHHHHHHhC------CCCeEEeCccccc-c-c-----CCCCeEEEEehhhHhcCCHHHHHHHHHHHHHHc
Confidence 5899999999999999872 3799999999874 2 2 2578999998652 235678899999999
Q ss_pred cCCeEEEEecc
Q 032390 76 KVGGIAVYDNT 86 (142)
Q Consensus 76 ~~gG~iv~dn~ 86 (142)
+|||.+++...
T Consensus 132 ~pgG~l~i~~~ 142 (203)
T 3h2b_A 132 EDGGGLLMSFF 142 (203)
T ss_dssp EEEEEEEEEEE
T ss_pred CCCcEEEEEEc
Confidence 99999998643
No 175
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.40 E-value=3.6e-07 Score=65.32 Aligned_cols=72 Identities=18% Similarity=0.174 Sum_probs=58.5
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC---cCcHHHHHHHH-hccc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK---DNYCNYHERLM-KLLK 76 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~---~~~~~~~~~~~-~~L~ 76 (142)
+|+++|+++.+++.|++++.. +++++.+|+.+.. .+++||+|++-... ++...+++.+. +.|+
T Consensus 66 ~v~gvD~s~~~~~~a~~~~~~-----~v~~~~~d~~~~~--------~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~~Lk 132 (250)
T 2p7i_A 66 DITCVEASEEAISHAQGRLKD-----GITYIHSRFEDAQ--------LPRRYDNIVLTHVLEHIDDPVALLKRINDDWLA 132 (250)
T ss_dssp CEEEEESCHHHHHHHHHHSCS-----CEEEEESCGGGCC--------CSSCEEEEEEESCGGGCSSHHHHHHHHHHTTEE
T ss_pred cEEEEeCCHHHHHHHHHhhhC-----CeEEEEccHHHcC--------cCCcccEEEEhhHHHhhcCHHHHHHHHHHHhcC
Confidence 489999999999999987632 7999999998751 25789999986532 24578899999 9999
Q ss_pred CCeEEEEec
Q 032390 77 VGGIAVYDN 85 (142)
Q Consensus 77 ~gG~iv~dn 85 (142)
|||.+++..
T Consensus 133 pgG~l~i~~ 141 (250)
T 2p7i_A 133 EGGRLFLVC 141 (250)
T ss_dssp EEEEEEEEE
T ss_pred CCCEEEEEc
Confidence 999998854
No 176
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.40 E-value=1.1e-06 Score=66.00 Aligned_cols=81 Identities=17% Similarity=0.224 Sum_probs=57.7
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCC-----cEEEEEccH------HHHHHHHhhcccCCCceeEEEEcCCC------cC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDH-----KINFIESEA------LSVLDQLLKYSENEGSFDYAFVDADK------DN 63 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~-----~v~~~~~da------~~~l~~~~~~~~~~~~fD~IfiD~~~------~~ 63 (142)
+|+++|+|+++++.|++.....+... .++++.+++ .+ ++.. .+.++||+|++--.. ..
T Consensus 73 ~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~-l~~~----~~~~~FD~V~~~~~lhy~~~~~~ 147 (302)
T 2vdw_A 73 LLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSS-VREV----FYFGKFNIIDWQFAIHYSFHPRH 147 (302)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHH-HHTT----CCSSCEEEEEEESCGGGTCSTTT
T ss_pred eEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhh-hhcc----ccCCCeeEEEECchHHHhCCHHH
Confidence 48999999999999999887766431 267888777 32 2211 024689999864211 23
Q ss_pred cHHHHHHHHhcccCCeEEEEecc
Q 032390 64 YCNYHERLMKLLKVGGIAVYDNT 86 (142)
Q Consensus 64 ~~~~~~~~~~~L~~gG~iv~dn~ 86 (142)
...+++.+.+.|+|||.+++...
T Consensus 148 ~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 148 YATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCCEEEEEeC
Confidence 46789999999999999987544
No 177
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.40 E-value=4.2e-07 Score=70.19 Aligned_cols=83 Identities=12% Similarity=0.236 Sum_probs=64.8
Q ss_pred CEEEEeCChhHHHHHHHHHHHc-----C-CC-CcEEEEEccHHHHHH----HHhhcccCCCceeEEEEcCCC---cCcHH
Q 032390 1 MITAIDVNRETYEIGLPIIKKA-----G-VD-HKINFIESEALSVLD----QLLKYSENEGSFDYAFVDADK---DNYCN 66 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~-----~-~~-~~v~~~~~da~~~l~----~~~~~~~~~~~fD~IfiD~~~---~~~~~ 66 (142)
+|+++|+++.+++.|+++++.. | +. ++++++.+|+.+... .+ ++++||+|++.... ++...
T Consensus 110 ~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~-----~~~~fD~V~~~~~l~~~~d~~~ 184 (383)
T 4fsd_A 110 KVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGV-----PDSSVDIVISNCVCNLSTNKLA 184 (383)
T ss_dssp EEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCC-----CTTCEEEEEEESCGGGCSCHHH
T ss_pred EEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCC-----CCCCEEEEEEccchhcCCCHHH
Confidence 4899999999999999998765 4 32 589999999976421 11 25689999987632 34678
Q ss_pred HHHHHHhcccCCeEEEEecccc
Q 032390 67 YHERLMKLLKVGGIAVYDNTLW 88 (142)
Q Consensus 67 ~~~~~~~~L~~gG~iv~dn~~~ 88 (142)
+++.+.+.|+|||.+++.....
T Consensus 185 ~l~~~~r~LkpgG~l~i~~~~~ 206 (383)
T 4fsd_A 185 LFKEIHRVLRDGGELYFSDVYA 206 (383)
T ss_dssp HHHHHHHHEEEEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCCEEEEEEecc
Confidence 8999999999999999865543
No 178
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.39 E-value=7.3e-07 Score=69.23 Aligned_cols=74 Identities=7% Similarity=0.007 Sum_probs=56.7
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc-------CcHHHHHHHHh
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD-------NYCNYHERLMK 73 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~-------~~~~~~~~~~~ 73 (142)
+|+++|+|+.+++.|++|++.+|+.++++++++|+.++. ...+||+|++|||.. ....++..+.+
T Consensus 258 ~v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~--------~~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~ 329 (384)
T 3ldg_A 258 DISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFK--------TNKINGVLISNPPYGERLLDDKAVDILYNEMGE 329 (384)
T ss_dssp CEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCC--------CCCCSCEEEECCCCTTTTSCHHHHHHHHHHHHH
T ss_pred eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCC--------ccCCcCEEEECCchhhccCCHHHHHHHHHHHHH
Confidence 389999999999999999999999888999999998752 145899999999842 23344444444
Q ss_pred cccC--CeEEE
Q 032390 74 LLKV--GGIAV 82 (142)
Q Consensus 74 ~L~~--gG~iv 82 (142)
.|++ ||.+.
T Consensus 330 ~lk~~~g~~~~ 340 (384)
T 3ldg_A 330 TFAPLKTWSQF 340 (384)
T ss_dssp HHTTCTTSEEE
T ss_pred HHhhCCCcEEE
Confidence 5544 66543
No 179
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.39 E-value=1.9e-07 Score=66.42 Aligned_cols=79 Identities=23% Similarity=0.339 Sum_probs=61.8
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCC----CCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc---CcH---HHHHH
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGV----DHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD---NYC---NYHER 70 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~----~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~---~~~---~~~~~ 70 (142)
+|+++|+++.+++.|++++...++ ..+++++.+|+.+. + + ..++||+|++..... ... .+++.
T Consensus 54 ~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~-~-~-----~~~~~D~v~~~~~l~~~~~~~~~~~~l~~ 126 (235)
T 3sm3_A 54 SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSL-S-F-----HDSSFDFAVMQAFLTSVPDPKERSRIIKE 126 (235)
T ss_dssp EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSC-C-S-----CTTCEEEEEEESCGGGCCCHHHHHHHHHH
T ss_pred eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEeccccc-C-C-----CCCceeEEEEcchhhcCCCHHHHHHHHHH
Confidence 479999999999999999988776 24699999998763 1 1 257899999865322 223 78899
Q ss_pred HHhcccCCeEEEEecc
Q 032390 71 LMKLLKVGGIAVYDNT 86 (142)
Q Consensus 71 ~~~~L~~gG~iv~dn~ 86 (142)
+.+.|+|||.+++...
T Consensus 127 ~~~~L~pgG~l~~~~~ 142 (235)
T 3sm3_A 127 VFRVLKPGAYLYLVEF 142 (235)
T ss_dssp HHHHEEEEEEEEEEEE
T ss_pred HHHHcCCCeEEEEEEC
Confidence 9999999999988543
No 180
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.38 E-value=1.5e-07 Score=66.58 Aligned_cols=76 Identities=11% Similarity=0.054 Sum_probs=54.3
Q ss_pred CEEEEeCChhHHHHHHHHHHHcC-----------CCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC-----cCc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAG-----------VDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK-----DNY 64 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~-----------~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~-----~~~ 64 (142)
+|+++|+|+.+++.|++.....+ ...+++++++|+.++-..- .++||+|+.-... ...
T Consensus 46 ~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~------~~~fD~v~~~~~l~~l~~~~~ 119 (203)
T 1pjz_A 46 HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD------IGHCAAFYDRAAMIALPADMR 119 (203)
T ss_dssp EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH------HHSEEEEEEESCGGGSCHHHH
T ss_pred eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCccc------CCCEEEEEECcchhhCCHHHH
Confidence 48999999999999998764310 1247999999998752210 1589999964321 123
Q ss_pred HHHHHHHHhcccCCeEEE
Q 032390 65 CNYHERLMKLLKVGGIAV 82 (142)
Q Consensus 65 ~~~~~~~~~~L~~gG~iv 82 (142)
..+++.+.+.|+|||.++
T Consensus 120 ~~~l~~~~r~LkpgG~~~ 137 (203)
T 1pjz_A 120 ERYVQHLEALMPQACSGL 137 (203)
T ss_dssp HHHHHHHHHHSCSEEEEE
T ss_pred HHHHHHHHHHcCCCcEEE
Confidence 457889999999999833
No 181
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.37 E-value=2.8e-07 Score=72.12 Aligned_cols=55 Identities=20% Similarity=0.134 Sum_probs=47.7
Q ss_pred CEEEEeCChhHHHHHHHHHHHc--CCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC
Q 032390 1 MITAIDVNRETYEIGLPIIKKA--GVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK 61 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~--~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~ 61 (142)
+|+++|+|+.+++.|++|++.+ |+ ++++++++|+.++++... .++||+||+||+.
T Consensus 117 ~V~~VD~s~~~l~~Ar~N~~~~~~gl-~~i~~i~~Da~~~L~~~~-----~~~fDvV~lDPPr 173 (410)
T 3ll7_A 117 QGIYIERNDETAVAARHNIPLLLNEG-KDVNILTGDFKEYLPLIK-----TFHPDYIYVDPAR 173 (410)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHSCTT-CEEEEEESCGGGSHHHHH-----HHCCSEEEECCEE
T ss_pred EEEEEECCHHHHHHHHHhHHHhccCC-CcEEEEECcHHHhhhhcc-----CCCceEEEECCCC
Confidence 4899999999999999999998 88 689999999998776542 3579999999864
No 182
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.36 E-value=5e-07 Score=65.40 Aligned_cols=75 Identities=21% Similarity=0.280 Sum_probs=59.4
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC---cCcHHHHHHHHhcccC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK---DNYCNYHERLMKLLKV 77 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~---~~~~~~~~~~~~~L~~ 77 (142)
+|+++|+|+.+++.|++++ . +...+++++.+|+.++ + + ++++||+|++.... ++...+++.+.+.|+|
T Consensus 63 ~v~~vD~s~~~~~~a~~~~-~-~~~~~~~~~~~d~~~~-~-~-----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~p 133 (263)
T 2yqz_A 63 RYIALDADAAMLEVFRQKI-A-GVDRKVQVVQADARAI-P-L-----PDESVHGVIVVHLWHLVPDWPKVLAEAIRVLKP 133 (263)
T ss_dssp EEEEEESCHHHHHHHHHHT-T-TSCTTEEEEESCTTSC-C-S-----CTTCEEEEEEESCGGGCTTHHHHHHHHHHHEEE
T ss_pred EEEEEECCHHHHHHHHHHh-h-ccCCceEEEEcccccC-C-C-----CCCCeeEEEECCchhhcCCHHHHHHHHHHHCCC
Confidence 4799999999999999988 3 3346899999999753 1 2 25689999986542 2457789999999999
Q ss_pred CeEEEEe
Q 032390 78 GGIAVYD 84 (142)
Q Consensus 78 gG~iv~d 84 (142)
||.+++.
T Consensus 134 gG~l~~~ 140 (263)
T 2yqz_A 134 GGALLEG 140 (263)
T ss_dssp EEEEEEE
T ss_pred CcEEEEE
Confidence 9999875
No 183
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.35 E-value=4.7e-07 Score=65.48 Aligned_cols=73 Identities=7% Similarity=0.171 Sum_probs=59.3
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC---cCcHHHHHHHHhcccC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK---DNYCNYHERLMKLLKV 77 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~---~~~~~~~~~~~~~L~~ 77 (142)
+|+++|+++++++.|++++. ..+++++.+|+.++ + + ..++||+|++.... .....+++.+.+.|+|
T Consensus 69 ~v~~vD~s~~~~~~a~~~~~----~~~~~~~~~d~~~~-~-~-----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkp 137 (253)
T 3g5l_A 69 KVLGIDLSERMLTEAKRKTT----SPVVCYEQKAIEDI-A-I-----EPDAYNVVLSSLALHYIASFDDICKKVYINLKS 137 (253)
T ss_dssp EEEEEESCHHHHHHHHHHCC----CTTEEEEECCGGGC-C-C-----CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEE
T ss_pred EEEEEECCHHHHHHHHHhhc----cCCeEEEEcchhhC-C-C-----CCCCeEEEEEchhhhhhhhHHHHHHHHHHHcCC
Confidence 47999999999999998775 45899999999763 1 1 25789999986532 3467889999999999
Q ss_pred CeEEEEe
Q 032390 78 GGIAVYD 84 (142)
Q Consensus 78 gG~iv~d 84 (142)
||.+++.
T Consensus 138 gG~l~~~ 144 (253)
T 3g5l_A 138 SGSFIFS 144 (253)
T ss_dssp EEEEEEE
T ss_pred CcEEEEE
Confidence 9999985
No 184
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.35 E-value=5.2e-07 Score=66.16 Aligned_cols=78 Identities=12% Similarity=0.127 Sum_probs=56.3
Q ss_pred CEEEEeCChhHHHHHHHHHHH----------c------CCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCC----
Q 032390 1 MITAIDVNRETYEIGLPIIKK----------A------GVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDAD---- 60 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~----------~------~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~---- 60 (142)
+|++||+|+.+++.|++.... . ....+++++++|+.++-.. ..++||+|+.-+.
T Consensus 92 ~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~~~------~~~~FD~V~~~~~l~~l 165 (252)
T 2gb4_A 92 TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLPRA------NIGKFDRIWDRGALVAI 165 (252)
T ss_dssp EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGGGG------CCCCEEEEEESSSTTTS
T ss_pred eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCCcc------cCCCEEEEEEhhhhhhC
Confidence 489999999999999875531 0 0125799999999875211 1268999995432
Q ss_pred -CcCcHHHHHHHHhcccCCeEEEEe
Q 032390 61 -KDNYCNYHERLMKLLKVGGIAVYD 84 (142)
Q Consensus 61 -~~~~~~~~~~~~~~L~~gG~iv~d 84 (142)
......+++.+.++|+|||.+++-
T Consensus 166 ~~~~~~~~l~~~~~~LkpGG~l~l~ 190 (252)
T 2gb4_A 166 NPGDHDRYADIILSLLRKEFQYLVA 190 (252)
T ss_dssp CGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 223456899999999999998643
No 185
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.34 E-value=6.2e-07 Score=68.76 Aligned_cols=81 Identities=14% Similarity=0.130 Sum_probs=62.3
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC-----cCcHHHHHHHHhcc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK-----DNYCNYHERLMKLL 75 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~-----~~~~~~~~~~~~~L 75 (142)
+++++|+ |++++.|++++...++.++++++.+|+.+.-..+ ++.||+|++-... +....+++.+.+.|
T Consensus 205 ~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~------p~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L 277 (363)
T 3dp7_A 205 EVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPF------PTGFDAVWMSQFLDCFSEEEVISILTRVAQSI 277 (363)
T ss_dssp EEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCC------CCCCSEEEEESCSTTSCHHHHHHHHHHHHHHC
T ss_pred EEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCC------CCCcCEEEEechhhhCCHHHHHHHHHHHHHhc
Confidence 3789999 9999999999999888889999999987520001 3579999984422 22356788999999
Q ss_pred cCCeEEEEecccc
Q 032390 76 KVGGIAVYDNTLW 88 (142)
Q Consensus 76 ~~gG~iv~dn~~~ 88 (142)
+|||.+++.+..+
T Consensus 278 ~pgG~l~i~e~~~ 290 (363)
T 3dp7_A 278 GKDSKVYIMETLW 290 (363)
T ss_dssp CTTCEEEEEECCT
T ss_pred CCCcEEEEEeecc
Confidence 9999987755444
No 186
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=98.33 E-value=1e-06 Score=62.70 Aligned_cols=77 Identities=17% Similarity=0.123 Sum_probs=55.5
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcH-HHHHHHHhcccCCe
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYC-NYHERLMKLLKVGG 79 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~-~~~~~~~~~L~~gG 79 (142)
+|+++|+|+.+++.+.+..+.. .++.++.+|+.+...... ..++||+|+++...+.-. .+++.+.+.|+|||
T Consensus 83 ~V~gvD~s~~~l~~~~~~a~~~---~~v~~~~~d~~~~~~~~~----~~~~fD~V~~~~~~~~~~~~~l~~~~r~LkpgG 155 (210)
T 1nt2_A 83 IIYAVEYSAKPFEKLLELVRER---NNIIPLLFDASKPWKYSG----IVEKVDLIYQDIAQKNQIEILKANAEFFLKEKG 155 (210)
T ss_dssp EEEEECCCHHHHHHHHHHHHHC---SSEEEECSCTTCGGGTTT----TCCCEEEEEECCCSTTHHHHHHHHHHHHEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHhcC---CCeEEEEcCCCCchhhcc----cccceeEEEEeccChhHHHHHHHHHHHHhCCCC
Confidence 4899999999887776655543 368999999865311000 136899999996544323 34788999999999
Q ss_pred EEEEe
Q 032390 80 IAVYD 84 (142)
Q Consensus 80 ~iv~d 84 (142)
.+++.
T Consensus 156 ~l~i~ 160 (210)
T 1nt2_A 156 EVVIM 160 (210)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99886
No 187
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.32 E-value=1.1e-06 Score=66.73 Aligned_cols=81 Identities=15% Similarity=0.129 Sum_probs=63.6
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC-----cCcHHHHHHHHhcc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK-----DNYCNYHERLMKLL 75 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~-----~~~~~~~~~~~~~L 75 (142)
+++++|+ +++++.|++++...++.++++++.+|+.+..... .+.||+|++-... +....+++.+.+.|
T Consensus 205 ~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~------~~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L 277 (352)
T 3mcz_A 205 TGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFE------GGAADVVMLNDCLHYFDAREAREVIGHAAGLV 277 (352)
T ss_dssp EEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGT------TCCEEEEEEESCGGGSCHHHHHHHHHHHHHTE
T ss_pred eEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccC------CCCccEEEEecccccCCHHHHHHHHHHHHHHc
Confidence 3789999 9999999999999998889999999987642111 4569999985432 22367889999999
Q ss_pred cCCeEEEEecccc
Q 032390 76 KVGGIAVYDNTLW 88 (142)
Q Consensus 76 ~~gG~iv~dn~~~ 88 (142)
+|||.+++.+..+
T Consensus 278 ~pgG~l~i~e~~~ 290 (352)
T 3mcz_A 278 KPGGALLILTMTM 290 (352)
T ss_dssp EEEEEEEEEEECC
T ss_pred CCCCEEEEEEecc
Confidence 9999998765544
No 188
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.32 E-value=9.2e-07 Score=68.65 Aligned_cols=53 Identities=25% Similarity=0.361 Sum_probs=47.1
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK 61 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~ 61 (142)
+|+++|+|+.+++.|++|++.+|+.+++++.++|+.++. .+++||+|++||+.
T Consensus 259 ~V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~--------~~~~~D~Iv~NPPy 311 (385)
T 3ldu_A 259 KIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFK--------SEDEFGFIITNPPY 311 (385)
T ss_dssp CEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCC--------CSCBSCEEEECCCC
T ss_pred eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcC--------cCCCCcEEEECCCC
Confidence 389999999999999999999999888999999998752 14689999999985
No 189
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.32 E-value=2.2e-07 Score=67.37 Aligned_cols=84 Identities=19% Similarity=0.077 Sum_probs=60.3
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCC----------------------------CCcE-EEEEccHHHHHHHHhhcccCCCc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGV----------------------------DHKI-NFIESEALSVLDQLLKYSENEGS 51 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~----------------------------~~~v-~~~~~da~~~l~~~~~~~~~~~~ 51 (142)
+|+++|+++.+++.|++++...+. ..++ +++.+|+.+...... ...++
T Consensus 81 ~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~d~~~~~~~~~---~~~~~ 157 (265)
T 2i62_A 81 EIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRRAIKQVLKCDVTQSQPLGG---VSLPP 157 (265)
T ss_dssp EEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHHHEEEEEECCTTSSSTTTT---CCCCC
T ss_pred eEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhhhheeEEEeeeccCCCCCc---cccCC
Confidence 479999999999999998865431 1138 999999876422110 01268
Q ss_pred eeEEEEcCCCc-------CcHHHHHHHHhcccCCeEEEEeccc
Q 032390 52 FDYAFVDADKD-------NYCNYHERLMKLLKVGGIAVYDNTL 87 (142)
Q Consensus 52 fD~IfiD~~~~-------~~~~~~~~~~~~L~~gG~iv~dn~~ 87 (142)
||+|++-.... .+..+++.+.++|+|||.+++....
T Consensus 158 fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 200 (265)
T 2i62_A 158 ADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDAL 200 (265)
T ss_dssp EEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred ccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecC
Confidence 99999854322 4567888899999999999886543
No 190
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.32 E-value=2.1e-06 Score=60.16 Aligned_cols=69 Identities=6% Similarity=0.109 Sum_probs=56.2
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC-----cCcHHHHHHHHhcc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK-----DNYCNYHERLMKLL 75 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~-----~~~~~~~~~~~~~L 75 (142)
+|+++|+|+.+++.|+++++..++ +++++++|+.++ +++||+|++|++. .....+++.+.+.+
T Consensus 74 ~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~----------~~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~l 141 (207)
T 1wy7_A 74 EVICVEVDKEAVDVLIENLGEFKG--KFKVFIGDVSEF----------NSRVDIVIMNPPFGSQRKHADRPFLLKAFEIS 141 (207)
T ss_dssp EEEEEESCHHHHHHHHHHTGGGTT--SEEEEESCGGGC----------CCCCSEEEECCCCSSSSTTTTHHHHHHHHHHC
T ss_pred EEEEEECCHHHHHHHHHHHHHcCC--CEEEEECchHHc----------CCCCCEEEEcCCCccccCCchHHHHHHHHHhc
Confidence 389999999999999999998887 799999999873 3589999999873 23457788888887
Q ss_pred cCCeEEEE
Q 032390 76 KVGGIAVY 83 (142)
Q Consensus 76 ~~gG~iv~ 83 (142)
|++++.
T Consensus 142 --~~~~~~ 147 (207)
T 1wy7_A 142 --DVVYSI 147 (207)
T ss_dssp --SEEEEE
T ss_pred --CcEEEE
Confidence 665544
No 191
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=98.32 E-value=3.4e-07 Score=66.32 Aligned_cols=78 Identities=18% Similarity=0.250 Sum_probs=62.0
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC-----cCcHHHHHHHHhcc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK-----DNYCNYHERLMKLL 75 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~-----~~~~~~~~~~~~~L 75 (142)
+|+++|+++.+++.|++++... ++++++.+|+.+. + + ++++||+|++.... .....+++.+.+.|
T Consensus 80 ~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~-~-~-----~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L 149 (266)
T 3ujc_A 80 HTHGIDICSNIVNMANERVSGN---NKIIFEANDILTK-E-F-----PENNFDLIYSRDAILALSLENKNKLFQKCYKWL 149 (266)
T ss_dssp EEEEEESCHHHHHHHHHTCCSC---TTEEEEECCTTTC-C-C-----CTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHE
T ss_pred EEEEEeCCHHHHHHHHHHhhcC---CCeEEEECccccC-C-C-----CCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHc
Confidence 4899999999999999977554 5899999999764 1 1 25789999986532 34567889999999
Q ss_pred cCCeEEEEecccc
Q 032390 76 KVGGIAVYDNTLW 88 (142)
Q Consensus 76 ~~gG~iv~dn~~~ 88 (142)
+|||.+++.....
T Consensus 150 ~pgG~l~~~~~~~ 162 (266)
T 3ujc_A 150 KPTGTLLITDYCA 162 (266)
T ss_dssp EEEEEEEEEEEEE
T ss_pred CCCCEEEEEEecc
Confidence 9999999876543
No 192
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.32 E-value=2.1e-06 Score=63.30 Aligned_cols=81 Identities=15% Similarity=0.175 Sum_probs=61.4
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCC---CcEEEEEccHHHHHHHHhhcccCCCceeEEEEcC-C---CcC-------cHH
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVD---HKINFIESEALSVLDQLLKYSENEGSFDYAFVDA-D---KDN-------YCN 66 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~---~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~-~---~~~-------~~~ 66 (142)
+|+++|+|+.+++.|+++....+.. .++.+..+|+.+....+. ..++||+|++-+ . ... ...
T Consensus 81 ~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~----~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~ 156 (293)
T 3thr_A 81 SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVP----AGDGFDAVICLGNSFAHLPDSKGDQSEHRL 156 (293)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSC----CTTCEEEEEECTTCGGGSCCSSSSSHHHHH
T ss_pred eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccc----cCCCeEEEEEcChHHhhcCccccCHHHHHH
Confidence 4899999999999999988654432 468999999987643221 257899999852 1 122 577
Q ss_pred HHHHHHhcccCCeEEEEec
Q 032390 67 YHERLMKLLKVGGIAVYDN 85 (142)
Q Consensus 67 ~~~~~~~~L~~gG~iv~dn 85 (142)
+++.+.+.|+|||.+++..
T Consensus 157 ~l~~~~~~LkpgG~l~~~~ 175 (293)
T 3thr_A 157 ALKNIASMVRPGGLLVIDH 175 (293)
T ss_dssp HHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCeEEEEEe
Confidence 8999999999999998753
No 193
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.32 E-value=3.4e-07 Score=64.21 Aligned_cols=75 Identities=11% Similarity=0.119 Sum_probs=58.5
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC------------------c
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK------------------D 62 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~------------------~ 62 (142)
+|+++|+++.+++.|++++.. .++++++.+|+.+. .+ +.++||+|++.+.. .
T Consensus 67 ~v~~~D~s~~~~~~a~~~~~~---~~~i~~~~~d~~~~--~~-----~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (215)
T 2pxx_A 67 NVTSVDYSSVVVAAMQACYAH---VPQLRWETMDVRKL--DF-----PSASFDVVLEKGTLDALLAGERDPWTVSSEGVH 136 (215)
T ss_dssp CEEEEESCHHHHHHHHHHTTT---CTTCEEEECCTTSC--CS-----CSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHH
T ss_pred cEEEEeCCHHHHHHHHHhccc---CCCcEEEEcchhcC--CC-----CCCcccEEEECcchhhhccccccccccccchhH
Confidence 489999999999999998764 25799999998764 12 24689999975421 1
Q ss_pred CcHHHHHHHHhcccCCeEEEEec
Q 032390 63 NYCNYHERLMKLLKVGGIAVYDN 85 (142)
Q Consensus 63 ~~~~~~~~~~~~L~~gG~iv~dn 85 (142)
....+++.+.+.|+|||.+++..
T Consensus 137 ~~~~~l~~~~~~LkpgG~li~~~ 159 (215)
T 2pxx_A 137 TVDQVLSEVSRVLVPGGRFISMT 159 (215)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHHhCcCCCEEEEEe
Confidence 34678888999999999998853
No 194
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.31 E-value=8e-07 Score=66.87 Aligned_cols=78 Identities=15% Similarity=0.203 Sum_probs=61.2
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC-----cCcHHHHHHHHhcc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK-----DNYCNYHERLMKLL 75 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~-----~~~~~~~~~~~~~L 75 (142)
+++++|++ .+++.|++++...++.++++++.+|+.+. .+ .+.||+|++-... +....+++.+.+.|
T Consensus 191 ~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~------~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L 261 (335)
T 2r3s_A 191 EIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEV--DY------GNDYDLVLLPNFLHHFDVATCEQLLRKIKTAL 261 (335)
T ss_dssp EEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTS--CC------CSCEEEEEEESCGGGSCHHHHHHHHHHHHHHE
T ss_pred eEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccC--CC------CCCCcEEEEcchhccCCHHHHHHHHHHHHHhC
Confidence 47899999 99999999999999888899999998763 12 3459999984322 23457889999999
Q ss_pred cCCeEEEEeccc
Q 032390 76 KVGGIAVYDNTL 87 (142)
Q Consensus 76 ~~gG~iv~dn~~ 87 (142)
+|||.+++-+..
T Consensus 262 ~pgG~l~i~e~~ 273 (335)
T 2r3s_A 262 AVEGKVIVFDFI 273 (335)
T ss_dssp EEEEEEEEEECC
T ss_pred CCCcEEEEEeec
Confidence 999977664443
No 195
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.30 E-value=1.7e-06 Score=66.40 Aligned_cols=78 Identities=10% Similarity=0.127 Sum_probs=62.5
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC-----cCcHHHHHHHHhcc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK-----DNYCNYHERLMKLL 75 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~-----~~~~~~~~~~~~~L 75 (142)
+++++|+ +.+++.|++++...++.++++++.+|..+. + +..||+|++-... .....+++.+.+.|
T Consensus 228 ~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~---~------p~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L 297 (369)
T 3gwz_A 228 RGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFET---I------PDGADVYLIKHVLHDWDDDDVVRILRRIATAM 297 (369)
T ss_dssp EEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTTC---C------CSSCSEEEEESCGGGSCHHHHHHHHHHHHTTC
T ss_pred eEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCCC---C------CCCceEEEhhhhhccCCHHHHHHHHHHHHHHc
Confidence 3789999 999999999999999888999999998732 2 3379999985432 22236899999999
Q ss_pred cCCeEEEEecccc
Q 032390 76 KVGGIAVYDNTLW 88 (142)
Q Consensus 76 ~~gG~iv~dn~~~ 88 (142)
+|||.+++.+..+
T Consensus 298 ~pgG~l~i~e~~~ 310 (369)
T 3gwz_A 298 KPDSRLLVIDNLI 310 (369)
T ss_dssp CTTCEEEEEEEBC
T ss_pred CCCCEEEEEEecc
Confidence 9999998866554
No 196
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.30 E-value=6.7e-07 Score=64.49 Aligned_cols=76 Identities=9% Similarity=0.177 Sum_probs=59.7
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC-----cCcHHHHHHHHhcc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK-----DNYCNYHERLMKLL 75 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~-----~~~~~~~~~~~~~L 75 (142)
+|+++|+++.+++.|++++... .+++++.+|+.+. + + +.++||+|++.... .....+++.+.+.|
T Consensus 118 ~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~-~-~-----~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L 187 (254)
T 1xtp_A 118 TTDLLEPVKHMLEEAKRELAGM---PVGKFILASMETA-T-L-----PPNTYDLIVIQWTAIYLTDADFVKFFKHCQQAL 187 (254)
T ss_dssp EEEEEESCHHHHHHHHHHTTTS---SEEEEEESCGGGC-C-C-----CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHE
T ss_pred EEEEEeCCHHHHHHHHHHhccC---CceEEEEccHHHC-C-C-----CCCCeEEEEEcchhhhCCHHHHHHHHHHHHHhc
Confidence 3799999999999999987654 5799999998763 1 1 24689999986542 23467788899999
Q ss_pred cCCeEEEEecc
Q 032390 76 KVGGIAVYDNT 86 (142)
Q Consensus 76 ~~gG~iv~dn~ 86 (142)
+|||.+++...
T Consensus 188 kpgG~l~i~~~ 198 (254)
T 1xtp_A 188 TPNGYIFFKEN 198 (254)
T ss_dssp EEEEEEEEEEE
T ss_pred CCCeEEEEEec
Confidence 99999988653
No 197
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.30 E-value=9.5e-07 Score=66.70 Aligned_cols=78 Identities=10% Similarity=0.056 Sum_probs=62.4
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCC-----CcCcHHHHHHHHhcc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDAD-----KDNYCNYHERLMKLL 75 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~-----~~~~~~~~~~~~~~L 75 (142)
+++.+|+ |++++.|++++...++.+++++..+|+.+. + +.+||+|++-.. .+.....++.+.+.|
T Consensus 195 ~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~------p~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L 264 (332)
T 3i53_A 195 SGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFDP---L------PAGAGGYVLSAVLHDWDDLSAVAILRRCAEAA 264 (332)
T ss_dssp EEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSC---C------CCSCSEEEEESCGGGSCHHHHHHHHHHHHHHH
T ss_pred eEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCCC---C------CCCCcEEEEehhhccCCHHHHHHHHHHHHHhc
Confidence 3688999 999999999999999888999999998632 1 237999998442 222467889999999
Q ss_pred cCCeEEEEecccc
Q 032390 76 KVGGIAVYDNTLW 88 (142)
Q Consensus 76 ~~gG~iv~dn~~~ 88 (142)
+|||.+++.+...
T Consensus 265 ~pgG~l~i~e~~~ 277 (332)
T 3i53_A 265 GSGGVVLVIEAVA 277 (332)
T ss_dssp TTTCEEEEEECCC
T ss_pred CCCCEEEEEeecC
Confidence 9999998765544
No 198
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.29 E-value=1e-06 Score=67.06 Aligned_cols=74 Identities=18% Similarity=0.193 Sum_probs=59.6
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC-----------------
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN----------------- 63 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~----------------- 63 (142)
+++++|+++.+++.|+.++...|+ +++++++|+.... ..++||+|+.+++...
T Consensus 161 ~v~GiDi~~~~~~~a~~n~~~~g~--~~~i~~~D~l~~~--------~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g 230 (344)
T 2f8l_A 161 HASGVDVDDLLISLALVGADLQRQ--KMTLLHQDGLANL--------LVDPVDVVISDLPVGYYPDDENAKTFELCREEG 230 (344)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHTC--CCEEEESCTTSCC--------CCCCEEEEEEECCCSEESCHHHHTTSTTCCSSS
T ss_pred eEEEEECCHHHHHHHHHHHHhCCC--CceEEECCCCCcc--------ccCCccEEEECCCCCCcCchhhhhhccccCCCC
Confidence 379999999999999999998887 5899999987531 1468999999988311
Q ss_pred ----cHHHHHHHHhcccCCeEEEEe
Q 032390 64 ----YCNYHERLMKLLKVGGIAVYD 84 (142)
Q Consensus 64 ----~~~~~~~~~~~L~~gG~iv~d 84 (142)
+..+++.+.+.|+|||.+++-
T Consensus 231 ~~~~~~~~l~~~~~~Lk~gG~~~~v 255 (344)
T 2f8l_A 231 HSFAHFLFIEQGMRYTKPGGYLFFL 255 (344)
T ss_dssp CEEHHHHHHHHHHHTEEEEEEEEEE
T ss_pred cchHHHHHHHHHHHHhCCCCEEEEE
Confidence 125788899999999987663
No 199
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.27 E-value=1.5e-06 Score=62.80 Aligned_cols=71 Identities=20% Similarity=0.193 Sum_probs=57.7
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC---cCcHHHHHHHHhcccC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK---DNYCNYHERLMKLLKV 77 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~---~~~~~~~~~~~~~L~~ 77 (142)
+|+++|+++.+++.|+++ .++++++.+|+.++. . +++||+|++.... ++...+++.+.+.|+|
T Consensus 59 ~v~~~D~s~~~~~~a~~~------~~~~~~~~~d~~~~~--~------~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~p 124 (259)
T 2p35_A 59 VITGIDSDDDMLEKAADR------LPNTNFGKADLATWK--P------AQKADLLYANAVFQWVPDHLAVLSQLMDQLES 124 (259)
T ss_dssp SEEEEESCHHHHHHHHHH------STTSEEEECCTTTCC--C------SSCEEEEEEESCGGGSTTHHHHHHHHGGGEEE
T ss_pred EEEEEECCHHHHHHHHHh------CCCcEEEECChhhcC--c------cCCcCEEEEeCchhhCCCHHHHHHHHHHhcCC
Confidence 489999999999999987 247999999987642 1 5689999987632 3467789999999999
Q ss_pred CeEEEEec
Q 032390 78 GGIAVYDN 85 (142)
Q Consensus 78 gG~iv~dn 85 (142)
||.+++..
T Consensus 125 gG~l~~~~ 132 (259)
T 2p35_A 125 GGVLAVQM 132 (259)
T ss_dssp EEEEEEEE
T ss_pred CeEEEEEe
Confidence 99998853
No 200
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.27 E-value=8.4e-07 Score=65.35 Aligned_cols=57 Identities=19% Similarity=0.249 Sum_probs=48.1
Q ss_pred CEEEEeCCh-------hHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCC
Q 032390 1 MITAIDVNR-------ETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDAD 60 (142)
Q Consensus 1 ~v~~ve~~~-------~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~ 60 (142)
+|+++|+++ ++++.|++|++..++.++++++++|+.++++.+.. ..++||+|++|+.
T Consensus 107 ~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~---~~~~fD~V~~dP~ 170 (258)
T 2r6z_A 107 TVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVK---TQGKPDIVYLDPM 170 (258)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHH---HHCCCSEEEECCC
T ss_pred EEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhc---cCCCccEEEECCC
Confidence 589999999 99999999998888766799999999998876521 0168999999985
No 201
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.27 E-value=2e-06 Score=62.42 Aligned_cols=77 Identities=13% Similarity=0.053 Sum_probs=53.3
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHH-HHHhcccCCe
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHE-RLMKLLKVGG 79 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~-~~~~~L~~gG 79 (142)
+|+++|+++.+++...+..+.. .++.++.+|+....... ...++||+||+|...+.....+. .+.+.|+|||
T Consensus 103 ~V~avD~s~~~l~~l~~~a~~r---~nv~~i~~Da~~~~~~~----~~~~~~D~I~~d~a~~~~~~il~~~~~~~LkpGG 175 (232)
T 3id6_C 103 KAYGVEFSPRVVRELLLVAQRR---PNIFPLLADARFPQSYK----SVVENVDVLYVDIAQPDQTDIAIYNAKFFLKVNG 175 (232)
T ss_dssp EEEEEECCHHHHHHHHHHHHHC---TTEEEEECCTTCGGGTT----TTCCCEEEEEECCCCTTHHHHHHHHHHHHEEEEE
T ss_pred EEEEEECcHHHHHHHHHHhhhc---CCeEEEEcccccchhhh----ccccceEEEEecCCChhHHHHHHHHHHHhCCCCe
Confidence 4899999999876554444332 47999999987531100 01368999999987655454443 4445999999
Q ss_pred EEEEe
Q 032390 80 IAVYD 84 (142)
Q Consensus 80 ~iv~d 84 (142)
.+++.
T Consensus 176 ~lvis 180 (232)
T 3id6_C 176 DMLLV 180 (232)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99875
No 202
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.27 E-value=5e-06 Score=61.59 Aligned_cols=78 Identities=13% Similarity=0.037 Sum_probs=53.5
Q ss_pred CEEEEeC-ChhHHHHHHHHH-----HHcCCC----CcEEEEEccH----HHHHHHHhhcccCCCceeEEEE-cCCC--cC
Q 032390 1 MITAIDV-NRETYEIGLPII-----KKAGVD----HKINFIESEA----LSVLDQLLKYSENEGSFDYAFV-DADK--DN 63 (142)
Q Consensus 1 ~v~~ve~-~~~~~~~a~~~~-----~~~~~~----~~v~~~~~da----~~~l~~~~~~~~~~~~fD~Ifi-D~~~--~~ 63 (142)
+|+++|+ ++++++.|++|+ +..++. +++++...+. ......+ ..++||+|++ |... ..
T Consensus 104 ~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-----~~~~fD~Ii~~dvl~~~~~ 178 (281)
T 3bzb_A 104 QVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQRCT-----GLQRFQVVLLADLLSFHQA 178 (281)
T ss_dssp EEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHHHH-----SCSSBSEEEEESCCSCGGG
T ss_pred EEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHhhc-----cCCCCCEEEEeCcccChHH
Confidence 4899999 899999999999 566654 4788885443 2232221 1468999987 6542 34
Q ss_pred cHHHHHHHHhccc---C--CeEEEE
Q 032390 64 YCNYHERLMKLLK---V--GGIAVY 83 (142)
Q Consensus 64 ~~~~~~~~~~~L~---~--gG~iv~ 83 (142)
+..+++.+.++|+ | ||.+++
T Consensus 179 ~~~ll~~l~~~Lk~~~p~~gG~l~v 203 (281)
T 3bzb_A 179 HDALLRSVKMLLALPANDPTAVALV 203 (281)
T ss_dssp HHHHHHHHHHHBCCTTTCTTCEEEE
T ss_pred HHHHHHHHHHHhcccCCCCCCEEEE
Confidence 6788999999999 9 997654
No 203
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.26 E-value=3.3e-07 Score=64.82 Aligned_cols=74 Identities=20% Similarity=0.226 Sum_probs=57.7
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC---c--HHHHHHHHhcc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN---Y--CNYHERLMKLL 75 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~---~--~~~~~~~~~~L 75 (142)
+++++|+++.+++.|++++. .+++++.+|+.+.. . .++||+|++...... . ..+++.+.+.|
T Consensus 69 ~v~~vD~s~~~~~~a~~~~~-----~~~~~~~~d~~~~~--~------~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L 135 (220)
T 3hnr_A 69 TVYGIEPSREMRMIAKEKLP-----KEFSITEGDFLSFE--V------PTSIDTIVSTYAFHHLTDDEKNVAIAKYSQLL 135 (220)
T ss_dssp EEEEECSCHHHHHHHHHHSC-----TTCCEESCCSSSCC--C------CSCCSEEEEESCGGGSCHHHHHHHHHHHHHHS
T ss_pred eEEEEeCCHHHHHHHHHhCC-----CceEEEeCChhhcC--C------CCCeEEEEECcchhcCChHHHHHHHHHHHHhc
Confidence 47999999999999998764 47999999987641 1 368999999764221 2 23788999999
Q ss_pred cCCeEEEEeccc
Q 032390 76 KVGGIAVYDNTL 87 (142)
Q Consensus 76 ~~gG~iv~dn~~ 87 (142)
+|||.+++....
T Consensus 136 kpgG~l~i~~~~ 147 (220)
T 3hnr_A 136 NKGGKIVFADTI 147 (220)
T ss_dssp CTTCEEEEEEEC
T ss_pred CCCCEEEEEecc
Confidence 999999987543
No 204
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.26 E-value=3.5e-07 Score=66.62 Aligned_cols=71 Identities=8% Similarity=0.040 Sum_probs=56.4
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCC-C------cCcHHHHHHHHh
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDAD-K------DNYCNYHERLMK 73 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~-~------~~~~~~~~~~~~ 73 (142)
+|+++|+++.+++.|++++. +++++.+|+.+.. .+++||+|++... . .....+++.+.+
T Consensus 74 ~v~gvD~s~~~~~~a~~~~~------~~~~~~~d~~~~~--------~~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~ 139 (263)
T 3pfg_A 74 TVEGLELSADMLAIARRRNP------DAVLHHGDMRDFS--------LGRRFSAVTCMFSSIGHLAGQAELDAALERFAA 139 (263)
T ss_dssp EEEEEESCHHHHHHHHHHCT------TSEEEECCTTTCC--------CSCCEEEEEECTTGGGGSCHHHHHHHHHHHHHH
T ss_pred eEEEEECCHHHHHHHHhhCC------CCEEEECChHHCC--------ccCCcCEEEEcCchhhhcCCHHHHHHHHHHHHH
Confidence 47999999999999998742 6899999997641 1468999998752 1 234467888999
Q ss_pred cccCCeEEEEec
Q 032390 74 LLKVGGIAVYDN 85 (142)
Q Consensus 74 ~L~~gG~iv~dn 85 (142)
.|+|||.++++.
T Consensus 140 ~L~pgG~l~i~~ 151 (263)
T 3pfg_A 140 HVLPDGVVVVEP 151 (263)
T ss_dssp TEEEEEEEEECC
T ss_pred hcCCCcEEEEEe
Confidence 999999999963
No 205
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.26 E-value=1e-06 Score=61.94 Aligned_cols=73 Identities=15% Similarity=0.266 Sum_probs=58.2
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc-----CcHHHHHHHHhcc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD-----NYCNYHERLMKLL 75 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~-----~~~~~~~~~~~~L 75 (142)
+|+++|+++.+++.|++ .+. .+++++.+|+.+. . ..++||+|++..... ....+++.+.+.|
T Consensus 70 ~v~~~D~s~~~~~~a~~----~~~-~~~~~~~~d~~~~---~-----~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L 136 (218)
T 3ou2_A 70 RVTALDGSAEMIAEAGR----HGL-DNVEFRQQDLFDW---T-----PDRQWDAVFFAHWLAHVPDDRFEAFWESVRSAV 136 (218)
T ss_dssp EEEEEESCHHHHHHHGG----GCC-TTEEEEECCTTSC---C-----CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHE
T ss_pred eEEEEeCCHHHHHHHHh----cCC-CCeEEEecccccC---C-----CCCceeEEEEechhhcCCHHHHHHHHHHHHHHc
Confidence 47999999999999998 444 4799999999875 1 257899999875322 1367889999999
Q ss_pred cCCeEEEEecc
Q 032390 76 KVGGIAVYDNT 86 (142)
Q Consensus 76 ~~gG~iv~dn~ 86 (142)
+|||.+++...
T Consensus 137 ~pgG~l~~~~~ 147 (218)
T 3ou2_A 137 APGGVVEFVDV 147 (218)
T ss_dssp EEEEEEEEEEE
T ss_pred CCCeEEEEEeC
Confidence 99999988654
No 206
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.25 E-value=2.6e-06 Score=57.87 Aligned_cols=72 Identities=13% Similarity=0.103 Sum_probs=57.2
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC---cCcHHHHHHHHhcccC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK---DNYCNYHERLMKLLKV 77 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~---~~~~~~~~~~~~~L~~ 77 (142)
+++++|+++.+++.|+++ .++++++.+| . + + ..++||+|++.... .+...+++.+.+.|+|
T Consensus 41 ~v~~vD~s~~~~~~a~~~------~~~v~~~~~d-~---~-~-----~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~p 104 (170)
T 3i9f_A 41 KLYCIDINVIALKEVKEK------FDSVITLSDP-K---E-I-----PDNSVDFILFANSFHDMDDKQHVISEVKRILKD 104 (170)
T ss_dssp EEEEECSCHHHHHHHHHH------CTTSEEESSG-G---G-S-----CTTCEEEEEEESCSTTCSCHHHHHHHHHHHEEE
T ss_pred eEEEEeCCHHHHHHHHHh------CCCcEEEeCC-C---C-C-----CCCceEEEEEccchhcccCHHHHHHHHHHhcCC
Confidence 479999999999999998 3579999999 1 1 2 25789999986532 3457889999999999
Q ss_pred CeEEEEecccc
Q 032390 78 GGIAVYDNTLW 88 (142)
Q Consensus 78 gG~iv~dn~~~ 88 (142)
||.+++.+...
T Consensus 105 gG~l~~~~~~~ 115 (170)
T 3i9f_A 105 DGRVIIIDWRK 115 (170)
T ss_dssp EEEEEEEEECS
T ss_pred CCEEEEEEcCc
Confidence 99999875543
No 207
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.25 E-value=1.6e-06 Score=66.36 Aligned_cols=76 Identities=13% Similarity=0.103 Sum_probs=60.3
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc-----CcHHHHHHHHhcc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD-----NYCNYHERLMKLL 75 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~-----~~~~~~~~~~~~L 75 (142)
+++++|+ +.+++.|++++...++.++++++.+|+.+. + +..||+|++..... ....+++.+.+.|
T Consensus 208 ~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~------~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L 277 (374)
T 1qzz_A 208 RGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKP---L------PVTADVVLLSFVLLNWSDEDALTILRGCVRAL 277 (374)
T ss_dssp EEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSC---C------SCCEEEEEEESCGGGSCHHHHHHHHHHHHHHE
T ss_pred EEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCc---C------CCCCCEEEEeccccCCCHHHHHHHHHHHHHhc
Confidence 3789999 999999999999999888999999998752 2 23599999865322 1246889999999
Q ss_pred cCCeEEEEecc
Q 032390 76 KVGGIAVYDNT 86 (142)
Q Consensus 76 ~~gG~iv~dn~ 86 (142)
+|||.+++-+.
T Consensus 278 ~pgG~l~i~e~ 288 (374)
T 1qzz_A 278 EPGGRLLVLDR 288 (374)
T ss_dssp EEEEEEEEEEC
T ss_pred CCCcEEEEEec
Confidence 99998776443
No 208
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.24 E-value=1.1e-06 Score=65.83 Aligned_cols=82 Identities=12% Similarity=0.090 Sum_probs=60.4
Q ss_pred CEEEEeCChhHHHHHHHHHHHcC------CCCcEEEEEccHHHHH--HHHhhcccCCCceeEEEEcCCC-------cCcH
Q 032390 1 MITAIDVNRETYEIGLPIIKKAG------VDHKINFIESEALSVL--DQLLKYSENEGSFDYAFVDADK-------DNYC 65 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~------~~~~v~~~~~da~~~l--~~~~~~~~~~~~fD~IfiD~~~-------~~~~ 65 (142)
+++++|+++.+++.|+++....+ ...+++++.+|+.+.. ..+. ...++||+|++.... ....
T Consensus 59 ~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~---~~~~~fD~V~~~~~l~~~~~~~~~~~ 135 (313)
T 3bgv_A 59 KLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFR---DPQMCFDICSCQFVCHYSFESYEQAD 135 (313)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCS---STTCCEEEEEEETCGGGGGGSHHHHH
T ss_pred EEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcc---cCCCCEEEEEEecchhhccCCHHHHH
Confidence 47999999999999999987653 2347999999997641 0110 013489999986533 1235
Q ss_pred HHHHHHHhcccCCeEEEEec
Q 032390 66 NYHERLMKLLKVGGIAVYDN 85 (142)
Q Consensus 66 ~~~~~~~~~L~~gG~iv~dn 85 (142)
.+++.+.+.|+|||.+++..
T Consensus 136 ~~l~~~~~~LkpgG~li~~~ 155 (313)
T 3bgv_A 136 MMLRNACERLSPGGYFIGTT 155 (313)
T ss_dssp HHHHHHHTTEEEEEEEEEEE
T ss_pred HHHHHHHHHhCCCcEEEEec
Confidence 78888999999999998753
No 209
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.24 E-value=2.9e-07 Score=65.83 Aligned_cols=67 Identities=13% Similarity=0.043 Sum_probs=54.2
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccC-CCceeEEEEcCCCcCcHHHHHHHHhcccCCe
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSEN-EGSFDYAFVDADKDNYCNYHERLMKLLKVGG 79 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~-~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG 79 (142)
+|+++|+++.+++.|+++ .++++++++|+.+.++ + . +++||+|++..+ ...+++.+.+.|+|||
T Consensus 72 ~v~~vD~s~~~~~~a~~~------~~~~~~~~~d~~~~~~-~-----~~~~~fD~v~~~~~---~~~~l~~~~~~LkpgG 136 (226)
T 3m33_A 72 RWAAYDFSPELLKLARAN------APHADVYEWNGKGELP-A-----GLGAPFGLIVSRRG---PTSVILRLPELAAPDA 136 (226)
T ss_dssp EEEEEESCHHHHHHHHHH------CTTSEEEECCSCSSCC-T-----TCCCCEEEEEEESC---CSGGGGGHHHHEEEEE
T ss_pred EEEEEECCHHHHHHHHHh------CCCceEEEcchhhccC-C-----cCCCCEEEEEeCCC---HHHHHHHHHHHcCCCc
Confidence 489999999999999998 2479999999965433 1 2 468999999743 4567888899999999
Q ss_pred EEE
Q 032390 80 IAV 82 (142)
Q Consensus 80 ~iv 82 (142)
.++
T Consensus 137 ~l~ 139 (226)
T 3m33_A 137 HFL 139 (226)
T ss_dssp EEE
T ss_pred EEE
Confidence 998
No 210
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.22 E-value=2e-06 Score=65.43 Aligned_cols=76 Identities=14% Similarity=0.206 Sum_probs=60.1
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc-----CcHHHHHHHHhccc
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD-----NYCNYHERLMKLLK 76 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~-----~~~~~~~~~~~~L~ 76 (142)
++++|+ +.+++.|++++...++.++++++.+|+.+. + +..||+|++..... ....+++.+.+.|+
T Consensus 210 ~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~------~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~ 279 (360)
T 1tw3_A 210 ATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEP---L------PRKADAIILSFVLLNWPDHDAVRILTRCAEALE 279 (360)
T ss_dssp EEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSC---C------SSCEEEEEEESCGGGSCHHHHHHHHHHHHHTEE
T ss_pred EEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCC---C------CCCccEEEEcccccCCCHHHHHHHHHHHHHhcC
Confidence 678898 999999999999999888999999998752 2 23599999865322 22468899999999
Q ss_pred CCeEEEEeccc
Q 032390 77 VGGIAVYDNTL 87 (142)
Q Consensus 77 ~gG~iv~dn~~ 87 (142)
|||.+++.+..
T Consensus 280 pgG~l~i~e~~ 290 (360)
T 1tw3_A 280 PGGRILIHERD 290 (360)
T ss_dssp EEEEEEEEECC
T ss_pred CCcEEEEEEEe
Confidence 99988765443
No 211
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.22 E-value=7.7e-07 Score=62.57 Aligned_cols=73 Identities=11% Similarity=0.148 Sum_probs=57.9
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCC---CcCcHHHHHHHHhcccC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDAD---KDNYCNYHERLMKLLKV 77 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~---~~~~~~~~~~~~~~L~~ 77 (142)
+++++|+++.+++.|++++ .+++++.+|+.+. + + ++++||+|++... .++....++.+.+.|+|
T Consensus 58 ~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~-~-~-----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~p 124 (211)
T 2gs9_A 58 QKVGVEPSEAMLAVGRRRA------PEATWVRAWGEAL-P-F-----PGESFDVVLLFTTLEFVEDVERVLLEARRVLRP 124 (211)
T ss_dssp EEEEECCCHHHHHHHHHHC------TTSEEECCCTTSC-C-S-----CSSCEEEEEEESCTTTCSCHHHHHHHHHHHEEE
T ss_pred eEEEEeCCHHHHHHHHHhC------CCcEEEEcccccC-C-C-----CCCcEEEEEEcChhhhcCCHHHHHHHHHHHcCC
Confidence 4799999999999999876 4689999998763 1 1 2468999998753 23467889999999999
Q ss_pred CeEEEEecc
Q 032390 78 GGIAVYDNT 86 (142)
Q Consensus 78 gG~iv~dn~ 86 (142)
||.+++...
T Consensus 125 gG~l~i~~~ 133 (211)
T 2gs9_A 125 GGALVVGVL 133 (211)
T ss_dssp EEEEEEEEE
T ss_pred CCEEEEEec
Confidence 999988543
No 212
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=98.22 E-value=1.7e-06 Score=62.97 Aligned_cols=77 Identities=13% Similarity=0.067 Sum_probs=58.7
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC-cHHHHHHHHhcccCCe
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN-YCNYHERLMKLLKVGG 79 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~-~~~~~~~~~~~L~~gG 79 (142)
+|+++|+++++++.++++.++. .++..+.+|+....... ...+.+|+||+|...+. ....+..+.+.|+|||
T Consensus 104 ~V~avD~s~~~~~~l~~~a~~~---~ni~~V~~d~~~p~~~~----~~~~~vDvVf~d~~~~~~~~~~l~~~~r~LKpGG 176 (233)
T 4df3_A 104 RIYGVEFAPRVMRDLLTVVRDR---RNIFPILGDARFPEKYR----HLVEGVDGLYADVAQPEQAAIVVRNARFFLRDGG 176 (233)
T ss_dssp EEEEEECCHHHHHHHHHHSTTC---TTEEEEESCTTCGGGGT----TTCCCEEEEEECCCCTTHHHHHHHHHHHHEEEEE
T ss_pred eEEEEeCCHHHHHHHHHhhHhh---cCeeEEEEeccCccccc----cccceEEEEEEeccCChhHHHHHHHHHHhccCCC
Confidence 4899999999999999877654 46899999886532111 12578999999986543 3457888889999999
Q ss_pred EEEEe
Q 032390 80 IAVYD 84 (142)
Q Consensus 80 ~iv~d 84 (142)
.+++.
T Consensus 177 ~lvI~ 181 (233)
T 4df3_A 177 YMLMA 181 (233)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 98763
No 213
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.21 E-value=2.6e-06 Score=60.00 Aligned_cols=76 Identities=11% Similarity=0.094 Sum_probs=58.3
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCC--CcCcHHHHHHHHhcccCC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDAD--KDNYCNYHERLMKLLKVG 78 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~--~~~~~~~~~~~~~~L~~g 78 (142)
+|+++|+++.+++.|+++ .++++..+++.+...... ...++||+|++... ..+...+++.+.+.|+||
T Consensus 76 ~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~---~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pg 145 (227)
T 3e8s_A 76 EAVGVDGDRTLVDAARAA-------GAGEVHLASYAQLAEAKV---PVGKDYDLICANFALLHQDIIELLSAMRTLLVPG 145 (227)
T ss_dssp EEEEEESCHHHHHHHHHT-------CSSCEEECCHHHHHTTCS---CCCCCEEEEEEESCCCSSCCHHHHHHHHHTEEEE
T ss_pred EEEEEcCCHHHHHHHHHh-------cccccchhhHHhhccccc---ccCCCccEEEECchhhhhhHHHHHHHHHHHhCCC
Confidence 479999999999999986 367889999887632211 12346999998653 345678999999999999
Q ss_pred eEEEEecc
Q 032390 79 GIAVYDNT 86 (142)
Q Consensus 79 G~iv~dn~ 86 (142)
|.+++...
T Consensus 146 G~l~~~~~ 153 (227)
T 3e8s_A 146 GALVIQTL 153 (227)
T ss_dssp EEEEEEEC
T ss_pred eEEEEEec
Confidence 99998644
No 214
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.21 E-value=1.1e-06 Score=66.35 Aligned_cols=78 Identities=6% Similarity=-0.005 Sum_probs=62.4
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc-----CcHHHHHHHHhcc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD-----NYCNYHERLMKLL 75 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~-----~~~~~~~~~~~~L 75 (142)
+++++|+ +.+++.|++++...++.++++++.+|+.+. + ++.||+|++-.... ....+++.+.+.|
T Consensus 193 ~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~------~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L 262 (334)
T 2ip2_A 193 RGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQE---V------PSNGDIYLLSRIIGDLDEAASLRLLGNCREAM 262 (334)
T ss_dssp EEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTTC---C------CSSCSEEEEESCGGGCCHHHHHHHHHHHHHHS
T ss_pred EEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCCC---C------CCCCCEEEEchhccCCCHHHHHHHHHHHHHhc
Confidence 3789999 999999999998888878999999998762 2 45799999865432 2247888999999
Q ss_pred cCCeEEEEecccc
Q 032390 76 KVGGIAVYDNTLW 88 (142)
Q Consensus 76 ~~gG~iv~dn~~~ 88 (142)
+|||.+++.+...
T Consensus 263 ~pgG~l~i~e~~~ 275 (334)
T 2ip2_A 263 AGDGRVVVIERTI 275 (334)
T ss_dssp CTTCEEEEEECCB
T ss_pred CCCCEEEEEEecc
Confidence 9999988765544
No 215
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.18 E-value=6.1e-07 Score=66.01 Aligned_cols=69 Identities=14% Similarity=0.208 Sum_probs=54.1
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC--cCcHHHHHHHHhcccCC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK--DNYCNYHERLMKLLKVG 78 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~--~~~~~~~~~~~~~L~~g 78 (142)
+|+++|+|+.|++.|++ .++++++++++.++ + + ++++||+|++-... -....++..+.+.|+||
T Consensus 63 ~v~gvD~s~~ml~~a~~-------~~~v~~~~~~~e~~-~-~-----~~~sfD~v~~~~~~h~~~~~~~~~e~~rvLkpg 128 (257)
T 4hg2_A 63 RVHAVDPGEAQIRQALR-------HPRVTYAVAPAEDT-G-L-----PPASVDVAIAAQAMHWFDLDRFWAELRRVARPG 128 (257)
T ss_dssp EEEEEESCHHHHHTCCC-------CTTEEEEECCTTCC-C-C-----CSSCEEEEEECSCCTTCCHHHHHHHHHHHEEEE
T ss_pred EEEEEeCcHHhhhhhhh-------cCCceeehhhhhhh-c-c-----cCCcccEEEEeeehhHhhHHHHHHHHHHHcCCC
Confidence 48999999999988764 25799999999764 1 2 36789999985421 23577899999999999
Q ss_pred eEEEE
Q 032390 79 GIAVY 83 (142)
Q Consensus 79 G~iv~ 83 (142)
|++++
T Consensus 129 G~l~~ 133 (257)
T 4hg2_A 129 AVFAA 133 (257)
T ss_dssp EEEEE
T ss_pred CEEEE
Confidence 99876
No 216
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.18 E-value=1.3e-06 Score=61.46 Aligned_cols=70 Identities=14% Similarity=0.055 Sum_probs=56.1
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC-----cCcHHHHHHHHhcc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK-----DNYCNYHERLMKLL 75 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~-----~~~~~~~~~~~~~L 75 (142)
+|+++|+++.+++.|++++ +++++.+|+.+.. ..++||+|++.... .....+++.+.+.|
T Consensus 67 ~v~~vD~s~~~~~~a~~~~-------~~~~~~~d~~~~~--------~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L 131 (211)
T 3e23_A 67 DVDATDGSPELAAEASRRL-------GRPVRTMLFHQLD--------AIDAYDAVWAHACLLHVPRDELADVLKLIWRAL 131 (211)
T ss_dssp EEEEEESCHHHHHHHHHHH-------TSCCEECCGGGCC--------CCSCEEEEEECSCGGGSCHHHHHHHHHHHHHHE
T ss_pred eEEEECCCHHHHHHHHHhc-------CCceEEeeeccCC--------CCCcEEEEEecCchhhcCHHHHHHHHHHHHHhc
Confidence 4799999999999999987 4677888887642 16789999987532 24557889999999
Q ss_pred cCCeEEEEec
Q 032390 76 KVGGIAVYDN 85 (142)
Q Consensus 76 ~~gG~iv~dn 85 (142)
+|||.+++..
T Consensus 132 kpgG~l~~~~ 141 (211)
T 3e23_A 132 KPGGLFYASY 141 (211)
T ss_dssp EEEEEEEEEE
T ss_pred CCCcEEEEEE
Confidence 9999999863
No 217
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.18 E-value=9.4e-06 Score=60.13 Aligned_cols=81 Identities=7% Similarity=0.076 Sum_probs=57.1
Q ss_pred EEEEeCChhHHHHHHHHHHHc-CCCCcE--EEEEccHHHHHHHHhhcccCCCceeEEEEcCC---CcCcHHHHHHHHhcc
Q 032390 2 ITAIDVNRETYEIGLPIIKKA-GVDHKI--NFIESEALSVLDQLLKYSENEGSFDYAFVDAD---KDNYCNYHERLMKLL 75 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~-~~~~~v--~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~---~~~~~~~~~~~~~~L 75 (142)
++++|.|++|++.|++.+... ++ .++ ++..+++.++....... ..+++||+|++-.. .++....++.+.++|
T Consensus 85 ~~~vD~S~~ml~~a~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~-~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~L 162 (292)
T 2aot_A 85 NEVVEPSAEQIAKYKELVAKTSNL-ENVKFAWHKETSSEYQSRMLEK-KELQKWDFIHMIQMLYYVKDIPATLKFFHSLL 162 (292)
T ss_dssp EEEECSCHHHHHHHHHHHHTCSSC-TTEEEEEECSCHHHHHHHHHTT-TCCCCEEEEEEESCGGGCSCHHHHHHHHHHTE
T ss_pred EEEEeCCHHHHHHHHHHHHhccCC-CcceEEEEecchhhhhhhhccc-cCCCceeEEEEeeeeeecCCHHHHHHHHHHHc
Confidence 399999999999999998764 44 344 45567776543211000 01568999998643 234677899999999
Q ss_pred cCCeEEEEe
Q 032390 76 KVGGIAVYD 84 (142)
Q Consensus 76 ~~gG~iv~d 84 (142)
+|||.+++-
T Consensus 163 kpgG~l~i~ 171 (292)
T 2aot_A 163 GTNAKMLII 171 (292)
T ss_dssp EEEEEEEEE
T ss_pred CCCcEEEEE
Confidence 999999874
No 218
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.18 E-value=8.6e-07 Score=64.94 Aligned_cols=84 Identities=21% Similarity=0.055 Sum_probs=57.7
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCC----------------------------CCcEE-EEEccHHHHHHHHhhcccCCCc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGV----------------------------DHKIN-FIESEALSVLDQLLKYSENEGS 51 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~----------------------------~~~v~-~~~~da~~~l~~~~~~~~~~~~ 51 (142)
+|+++|+|+.+++.|+++++.... ..+++ ++.+|+.+..+-.. ...++
T Consensus 80 ~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~D~~~~~~~~~---~~~~~ 156 (263)
T 2a14_A 80 DITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRAAVKRVLKCDVHLGNPLAP---AVLPL 156 (263)
T ss_dssp EEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHHHEEEEEECCTTSSSTTTT---CCCCC
T ss_pred ceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHhhhheEEeccccCCCCCCc---cccCC
Confidence 389999999999999998765321 01244 88888876321000 01358
Q ss_pred eeEEEEcC-------CCcCcHHHHHHHHhcccCCeEEEEeccc
Q 032390 52 FDYAFVDA-------DKDNYCNYHERLMKLLKVGGIAVYDNTL 87 (142)
Q Consensus 52 fD~IfiD~-------~~~~~~~~~~~~~~~L~~gG~iv~dn~~ 87 (142)
||+|++-- ..+.+...++.+.++|+|||.+++....
T Consensus 157 fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~ 199 (263)
T 2a14_A 157 ADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTL 199 (263)
T ss_dssp EEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred CCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEee
Confidence 99999742 1234567788888999999999987543
No 219
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.17 E-value=2.5e-06 Score=62.25 Aligned_cols=82 Identities=10% Similarity=0.040 Sum_probs=59.5
Q ss_pred CEEEEeCChh------HHHHHHHHHHHcCCCCcEEEEEcc-HHHHHHHHhhcccCCCceeEEEEcCCC---cCcHHHHHH
Q 032390 1 MITAIDVNRE------TYEIGLPIIKKAGVDHKINFIESE-ALSVLDQLLKYSENEGSFDYAFVDADK---DNYCNYHER 70 (142)
Q Consensus 1 ~v~~ve~~~~------~~~~a~~~~~~~~~~~~v~~~~~d-a~~~l~~~~~~~~~~~~fD~IfiD~~~---~~~~~~~~~ 70 (142)
+|+++|+++. +++.|++++...++.++++++.+| ....-..+ ..++||+|++.... +....+++.
T Consensus 70 ~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~-----~~~~fD~v~~~~~l~~~~~~~~~~~~ 144 (275)
T 3bkx_A 70 HVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPI-----ADQHFDRVVLAHSLWYFASANALALL 144 (275)
T ss_dssp EEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGG-----TTCCCSEEEEESCGGGSSCHHHHHHH
T ss_pred EEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCC-----CCCCEEEEEEccchhhCCCHHHHHHH
Confidence 4799999997 999999999998887789999998 32110011 24789999986542 223455666
Q ss_pred HHhcccCCeEEEEeccc
Q 032390 71 LMKLLKVGGIAVYDNTL 87 (142)
Q Consensus 71 ~~~~L~~gG~iv~dn~~ 87 (142)
+..+++|||.+++....
T Consensus 145 ~~~l~~~gG~l~~~~~~ 161 (275)
T 3bkx_A 145 FKNMAAVCDHVDVAEWS 161 (275)
T ss_dssp HHHHTTTCSEEEEEEEC
T ss_pred HHHHhCCCCEEEEEEec
Confidence 66777789999886544
No 220
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.16 E-value=3e-05 Score=54.83 Aligned_cols=75 Identities=17% Similarity=0.147 Sum_probs=54.7
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC---cHHHHHHHHhcccC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN---YCNYHERLMKLLKV 77 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~---~~~~~~~~~~~L~~ 77 (142)
+++++|+|+.+++.|+++++.+|...++++ +|..... ++++||+|+.----+. -...+..+.+.|+|
T Consensus 75 ~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~--------~~~~~DvVLa~k~LHlL~~~~~al~~v~~~L~p 144 (200)
T 3fzg_A 75 IYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDV--------YKGTYDVVFLLKMLPVLKQQDVNILDFLQLFHT 144 (200)
T ss_dssp EEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHH--------TTSEEEEEEEETCHHHHHHTTCCHHHHHHTCEE
T ss_pred EEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccC--------CCCCcChhhHhhHHHhhhhhHHHHHHHHHHhCC
Confidence 478999999999999999999998777777 5554432 2678999997432111 11123367889999
Q ss_pred CeEEEEec
Q 032390 78 GGIAVYDN 85 (142)
Q Consensus 78 gG~iv~dn 85 (142)
||++|.-.
T Consensus 145 ggvfISfp 152 (200)
T 3fzg_A 145 QNFVISFP 152 (200)
T ss_dssp EEEEEEEE
T ss_pred CCEEEEeC
Confidence 99998754
No 221
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.16 E-value=1.5e-06 Score=63.92 Aligned_cols=71 Identities=17% Similarity=0.129 Sum_probs=57.3
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC---cCcHHHHHHHHhcccC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK---DNYCNYHERLMKLLKV 77 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~---~~~~~~~~~~~~~L~~ 77 (142)
+|+++|+++.+++.|++++ +++++..+|+.++ + + +++||+|++.... .+...+++.+.+.|+|
T Consensus 81 ~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~-~-~------~~~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkp 146 (279)
T 3ccf_A 81 EVLGTDNAATMIEKARQNY------PHLHFDVADARNF-R-V------DKPLDAVFSNAMLHWVKEPEAAIASIHQALKS 146 (279)
T ss_dssp EEEEEESCHHHHHHHHHHC------TTSCEEECCTTTC-C-C------SSCEEEEEEESCGGGCSCHHHHHHHHHHHEEE
T ss_pred eEEEEECCHHHHHHHHhhC------CCCEEEECChhhC-C-c------CCCcCEEEEcchhhhCcCHHHHHHHHHHhcCC
Confidence 4799999999999999865 4689999999763 2 1 4689999986542 3457889999999999
Q ss_pred CeEEEEec
Q 032390 78 GGIAVYDN 85 (142)
Q Consensus 78 gG~iv~dn 85 (142)
||.+++..
T Consensus 147 gG~l~~~~ 154 (279)
T 3ccf_A 147 GGRFVAEF 154 (279)
T ss_dssp EEEEEEEE
T ss_pred CcEEEEEe
Confidence 99998853
No 222
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.16 E-value=1.2e-05 Score=59.38 Aligned_cols=83 Identities=8% Similarity=0.009 Sum_probs=60.3
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHH---H--hhcccCCCceeEEEEcCC-----CcCcHHHHHH
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQ---L--LKYSENEGSFDYAFVDAD-----KDNYCNYHER 70 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~---~--~~~~~~~~~fD~IfiD~~-----~~~~~~~~~~ 70 (142)
+|+++|+||.+++.|++++.. .++++++.+|+.+.-.- . .+. .+..+||+|++-.. .......++.
T Consensus 106 ~v~~vD~sp~~l~~Ar~~~~~---~~~v~~~~~D~~~~~~~~~~~~~~~~-~d~~~~d~v~~~~vlh~~~d~~~~~~l~~ 181 (274)
T 2qe6_A 106 RVVYVDIDPMVLTHGRALLAK---DPNTAVFTADVRDPEYILNHPDVRRM-IDFSRPAAIMLVGMLHYLSPDVVDRVVGA 181 (274)
T ss_dssp EEEEEESSHHHHHHHHHHHTT---CTTEEEEECCTTCHHHHHHSHHHHHH-CCTTSCCEEEETTTGGGSCTTTHHHHHHH
T ss_pred EEEEEECChHHHHHHHHhcCC---CCCeEEEEeeCCCchhhhccchhhcc-CCCCCCEEEEEechhhhCCcHHHHHHHHH
Confidence 489999999999999998843 35899999999753110 0 000 01257999998642 1135778999
Q ss_pred HHhcccCCeEEEEeccc
Q 032390 71 LMKLLKVGGIAVYDNTL 87 (142)
Q Consensus 71 ~~~~L~~gG~iv~dn~~ 87 (142)
+.+.|+|||.+++....
T Consensus 182 ~~~~L~pGG~l~i~~~~ 198 (274)
T 2qe6_A 182 YRDALAPGSYLFMTSLV 198 (274)
T ss_dssp HHHHSCTTCEEEEEEEB
T ss_pred HHHhCCCCcEEEEEEec
Confidence 99999999999987654
No 223
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.15 E-value=1.6e-06 Score=62.00 Aligned_cols=74 Identities=15% Similarity=0.257 Sum_probs=58.2
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC---cCcHHHHHHHHhcccC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK---DNYCNYHERLMKLLKV 77 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~---~~~~~~~~~~~~~L~~ 77 (142)
+|+++|+++.+++.|+++... .+++++.+|+.+.. + +.++||+|++.... .....+++.+.+.|+|
T Consensus 68 ~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~d~~~~~--~-----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~p 136 (243)
T 3bkw_A 68 YVLGLDLSEKMLARARAAGPD----TGITYERADLDKLH--L-----PQDSFDLAYSSLALHYVEDVARLFRTVHQALSP 136 (243)
T ss_dssp EEEEEESCHHHHHHHHHTSCS----SSEEEEECCGGGCC--C-----CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEE
T ss_pred eEEEEcCCHHHHHHHHHhccc----CCceEEEcChhhcc--C-----CCCCceEEEEeccccccchHHHHHHHHHHhcCc
Confidence 479999999999999986633 37999999997641 1 25689999986532 2457889999999999
Q ss_pred CeEEEEec
Q 032390 78 GGIAVYDN 85 (142)
Q Consensus 78 gG~iv~dn 85 (142)
||.+++..
T Consensus 137 gG~l~~~~ 144 (243)
T 3bkw_A 137 GGHFVFST 144 (243)
T ss_dssp EEEEEEEE
T ss_pred CcEEEEEe
Confidence 99998753
No 224
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.15 E-value=1.1e-06 Score=64.80 Aligned_cols=56 Identities=9% Similarity=0.146 Sum_probs=45.9
Q ss_pred CEEEEeCChhHHHHHHHHHHHcC--------CCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAG--------VDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD 62 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~--------~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~ 62 (142)
+|+++|+++.+++.++++++++. +.++++++++|+.++++.+ .++||+||+||+.+
T Consensus 112 ~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~------~~~fDvV~lDP~y~ 175 (258)
T 2oyr_A 112 RVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDI------TPRPQVVYLDPMFP 175 (258)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTC------SSCCSEEEECCCCC
T ss_pred EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhC------cccCCEEEEcCCCC
Confidence 58999999999999999887653 3357999999999987654 34799999999643
No 225
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.15 E-value=4.5e-06 Score=58.32 Aligned_cols=66 Identities=14% Similarity=0.208 Sum_probs=51.1
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC-----cCcHHHHHHHHhcc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK-----DNYCNYHERLMKLL 75 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~-----~~~~~~~~~~~~~L 75 (142)
+|+++|+|+.+++.|++++. +++++.+|+.++ +++||+|++|++. .....+++.+.+.+
T Consensus 76 ~v~~vD~~~~~~~~a~~~~~------~~~~~~~d~~~~----------~~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~~ 139 (200)
T 1ne2_A 76 SVTAFDIDPDAIETAKRNCG------GVNFMVADVSEI----------SGKYDTWIMNPPFGSVVKHSDRAFIDKAFETS 139 (200)
T ss_dssp EEEEEESCHHHHHHHHHHCT------TSEEEECCGGGC----------CCCEEEEEECCCC-------CHHHHHHHHHHE
T ss_pred EEEEEECCHHHHHHHHHhcC------CCEEEECcHHHC----------CCCeeEEEECCCchhccCchhHHHHHHHHHhc
Confidence 38999999999999999875 689999999873 3589999999873 22356788888877
Q ss_pred cCCeEEEEe
Q 032390 76 KVGGIAVYD 84 (142)
Q Consensus 76 ~~gG~iv~d 84 (142)
|+++++.
T Consensus 140 --g~~~~~~ 146 (200)
T 1ne2_A 140 --MWIYSIG 146 (200)
T ss_dssp --EEEEEEE
T ss_pred --CcEEEEE
Confidence 5555544
No 226
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.15 E-value=7.2e-06 Score=62.51 Aligned_cols=76 Identities=9% Similarity=0.018 Sum_probs=60.5
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc-----CcHHHHHHHHhcc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD-----NYCNYHERLMKLL 75 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~-----~~~~~~~~~~~~L 75 (142)
+++++|+ +.+++.|+++++..++.++++++.+|+.+. . ...+|+|++..... ....+++.+.+.|
T Consensus 216 ~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~-------~~~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L 285 (359)
T 1x19_A 216 DSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKE--S-------YPEADAVLFCRILYSANEQLSTIMCKKAFDAM 285 (359)
T ss_dssp EEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTS--C-------CCCCSEEEEESCGGGSCHHHHHHHHHHHHTTC
T ss_pred eEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccC--C-------CCCCCEEEEechhccCCHHHHHHHHHHHHHhc
Confidence 4789999 999999999999999888899999999764 1 23459999865322 2466789999999
Q ss_pred cCCeEEEEecc
Q 032390 76 KVGGIAVYDNT 86 (142)
Q Consensus 76 ~~gG~iv~dn~ 86 (142)
+|||.+++-+.
T Consensus 286 ~pgG~l~i~e~ 296 (359)
T 1x19_A 286 RSGGRLLILDM 296 (359)
T ss_dssp CTTCEEEEEEE
T ss_pred CCCCEEEEEec
Confidence 99999965443
No 227
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.14 E-value=2.4e-06 Score=58.71 Aligned_cols=72 Identities=13% Similarity=0.122 Sum_probs=56.1
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC------cCcHHHHHHHHhc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK------DNYCNYHERLMKL 74 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~------~~~~~~~~~~~~~ 74 (142)
+++++|+++.+++.|++++ .+++++.+|+.+. + + +.++||+|++.++. +....+++.+.+.
T Consensus 70 ~v~~~D~~~~~~~~a~~~~------~~~~~~~~d~~~~-~-~-----~~~~~D~i~~~~~~~~~~~~~~~~~~l~~~~~~ 136 (195)
T 3cgg_A 70 DVLGTDLDPILIDYAKQDF------PEARWVVGDLSVD-Q-I-----SETDFDLIVSAGNVMGFLAEDGREPALANIHRA 136 (195)
T ss_dssp EEEEEESCHHHHHHHHHHC------TTSEEEECCTTTS-C-C-----CCCCEEEEEECCCCGGGSCHHHHHHHHHHHHHH
T ss_pred cEEEEcCCHHHHHHHHHhC------CCCcEEEcccccC-C-C-----CCCceeEEEECCcHHhhcChHHHHHHHHHHHHH
Confidence 4799999999999999875 2589999998763 1 1 24689999997432 2236788889999
Q ss_pred ccCCeEEEEec
Q 032390 75 LKVGGIAVYDN 85 (142)
Q Consensus 75 L~~gG~iv~dn 85 (142)
|+|||.+++..
T Consensus 137 l~~~G~l~~~~ 147 (195)
T 3cgg_A 137 LGADGRAVIGF 147 (195)
T ss_dssp EEEEEEEEEEE
T ss_pred hCCCCEEEEEe
Confidence 99999998853
No 228
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.14 E-value=4.4e-06 Score=60.01 Aligned_cols=78 Identities=14% Similarity=0.063 Sum_probs=56.8
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC-----cCcHHHHHHHHhcc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK-----DNYCNYHERLMKLL 75 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~-----~~~~~~~~~~~~~L 75 (142)
+|+++|+|+.+++.|++++ . ..+++++++|+.+.-....- .....||+|++.... .....+++.+.+.|
T Consensus 80 ~v~gvD~s~~~~~~a~~~~---~-~~~~~~~~~d~~~~~~~~~~--~~~~~~d~v~~~~~~~~~~~~~~~~~l~~~~~~L 153 (245)
T 3ggd_A 80 RVIGLDVSKSALEIAAKEN---T-AANISYRLLDGLVPEQAAQI--HSEIGDANIYMRTGFHHIPVEKRELLGQSLRILL 153 (245)
T ss_dssp CEEEEESCHHHHHHHHHHS---C-CTTEEEEECCTTCHHHHHHH--HHHHCSCEEEEESSSTTSCGGGHHHHHHHHHHHH
T ss_pred CEEEEECCHHHHHHHHHhC---c-ccCceEEECccccccccccc--ccccCccEEEEcchhhcCCHHHHHHHHHHHHHHc
Confidence 5899999999999999977 2 24799999999774321100 001359999987532 24568899999999
Q ss_pred cCCeEEEEe
Q 032390 76 KVGGIAVYD 84 (142)
Q Consensus 76 ~~gG~iv~d 84 (142)
+|||.+++-
T Consensus 154 kpgG~l~i~ 162 (245)
T 3ggd_A 154 GKQGAMYLI 162 (245)
T ss_dssp TTTCEEEEE
T ss_pred CCCCEEEEE
Confidence 999986553
No 229
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.12 E-value=2e-06 Score=61.52 Aligned_cols=74 Identities=14% Similarity=0.191 Sum_probs=58.6
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCC---CcCcHHHHHHHHhcccC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDAD---KDNYCNYHERLMKLLKV 77 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~---~~~~~~~~~~~~~~L~~ 77 (142)
+|+++|+++.+++.|+++. ...+++++.+|+.+. + + +.++||+|++... .+....+++.+.+.|+|
T Consensus 77 ~v~~vD~s~~~~~~a~~~~----~~~~~~~~~~d~~~~-~-~-----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~p 145 (242)
T 3l8d_A 77 KAVGVDISEVMIQKGKERG----EGPDLSFIKGDLSSL-P-F-----ENEQFEAIMAINSLEWTEEPLRALNEIKRVLKS 145 (242)
T ss_dssp EEEEEESCHHHHHHHHTTT----CBTTEEEEECBTTBC-S-S-----CTTCEEEEEEESCTTSSSCHHHHHHHHHHHEEE
T ss_pred eEEEEECCHHHHHHHHhhc----ccCCceEEEcchhcC-C-C-----CCCCccEEEEcChHhhccCHHHHHHHHHHHhCC
Confidence 4799999999999999864 235799999999764 1 1 2578999998653 23456889999999999
Q ss_pred CeEEEEec
Q 032390 78 GGIAVYDN 85 (142)
Q Consensus 78 gG~iv~dn 85 (142)
||.+++..
T Consensus 146 gG~l~i~~ 153 (242)
T 3l8d_A 146 DGYACIAI 153 (242)
T ss_dssp EEEEEEEE
T ss_pred CeEEEEEE
Confidence 99998864
No 230
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.07 E-value=3.1e-06 Score=60.29 Aligned_cols=72 Identities=7% Similarity=0.077 Sum_probs=55.6
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCC-------CcCcHHHHHHHHh
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDAD-------KDNYCNYHERLMK 73 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~-------~~~~~~~~~~~~~ 73 (142)
+++++|+++.+++.|++++ ++++++.+|+.+.. ..++||+|++-.. ......+++.+.+
T Consensus 64 ~v~~~D~s~~~~~~a~~~~------~~~~~~~~d~~~~~--------~~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~ 129 (239)
T 3bxo_A 64 DTAGLELSEDMLTHARKRL------PDATLHQGDMRDFR--------LGRKFSAVVSMFSSVGYLKTTEELGAAVASFAE 129 (239)
T ss_dssp EEEEEESCHHHHHHHHHHC------TTCEEEECCTTTCC--------CSSCEEEEEECTTGGGGCCSHHHHHHHHHHHHH
T ss_pred cEEEEeCCHHHHHHHHHhC------CCCEEEECCHHHcc--------cCCCCcEEEEcCchHhhcCCHHHHHHHHHHHHH
Confidence 3799999999999999864 36899999987631 1468999995321 1234678888999
Q ss_pred cccCCeEEEEecc
Q 032390 74 LLKVGGIAVYDNT 86 (142)
Q Consensus 74 ~L~~gG~iv~dn~ 86 (142)
.|+|||.++++..
T Consensus 130 ~L~pgG~l~~~~~ 142 (239)
T 3bxo_A 130 HLEPGGVVVVEPW 142 (239)
T ss_dssp TEEEEEEEEECCC
T ss_pred hcCCCeEEEEEec
Confidence 9999999998743
No 231
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.07 E-value=4.1e-06 Score=68.81 Aligned_cols=77 Identities=12% Similarity=0.096 Sum_probs=61.8
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcC-----CCcCcHHHHHHHHhcc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDA-----DKDNYCNYHERLMKLL 75 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~-----~~~~~~~~~~~~~~~L 75 (142)
+|++||.|+ ++..|++.++..+++++|++++||+.++ .+ +++.|+|+..- ..+..++.+.+..++|
T Consensus 387 kVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev--~L------PEKVDIIVSEwMG~fLl~E~mlevL~Ardr~L 457 (637)
T 4gqb_A 387 KLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREW--VA------PEKADIIVSELLGSFADNELSPECLDGAQHFL 457 (637)
T ss_dssp EEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTC--CC------SSCEEEEECCCCBTTBGGGCHHHHHHHHGGGE
T ss_pred EEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcceec--cC------CcccCEEEEEcCcccccccCCHHHHHHHHHhc
Confidence 479999997 6788999999999999999999999886 22 67999998653 1223566777777899
Q ss_pred cCCeEEEEecc
Q 032390 76 KVGGIAVYDNT 86 (142)
Q Consensus 76 ~~gG~iv~dn~ 86 (142)
+|||+++-+.+
T Consensus 458 KPgGimiPs~a 468 (637)
T 4gqb_A 458 KDDGVSIPGEY 468 (637)
T ss_dssp EEEEEEESCEE
T ss_pred CCCcEEccccc
Confidence 99999975533
No 232
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.07 E-value=4.5e-06 Score=65.75 Aligned_cols=75 Identities=15% Similarity=0.202 Sum_probs=60.0
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCC-cEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC----------------
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDH-KINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN---------------- 63 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~-~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~---------------- 63 (142)
+++++|+++.+++.|+.|+...|+.. .+++.++|+.... ..++||+|+.+||...
T Consensus 210 ~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~--------~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~ 281 (445)
T 2okc_A 210 ALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKE--------PSTLVDVILANPPFGTRPAGSVDINRPDFYVE 281 (445)
T ss_dssp TEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSC--------CSSCEEEEEECCCSSCCCTTCCCCCCTTSSSC
T ss_pred EEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCc--------ccCCcCEEEECCCCCCcccccchhhHhhcCCC
Confidence 47999999999999999999888853 6889999987531 1348999999986321
Q ss_pred ----cHHHHHHHHhcccCCeEEEE
Q 032390 64 ----YCNYHERLMKLLKVGGIAVY 83 (142)
Q Consensus 64 ----~~~~~~~~~~~L~~gG~iv~ 83 (142)
...+++.+.++|+|||.+++
T Consensus 282 ~~~~~~~fl~~~~~~Lk~gG~~a~ 305 (445)
T 2okc_A 282 TKNNQLNFLQHMMLMLKTGGRAAV 305 (445)
T ss_dssp CSCHHHHHHHHHHHHEEEEEEEEE
T ss_pred CcchHHHHHHHHHHHhccCCEEEE
Confidence 13678999999999998754
No 233
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.01 E-value=2.5e-06 Score=61.41 Aligned_cols=76 Identities=14% Similarity=0.098 Sum_probs=57.2
Q ss_pred CEEEEeCC-hhHHHHH---HHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc--------CcHHHH
Q 032390 1 MITAIDVN-RETYEIG---LPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD--------NYCNYH 68 (142)
Q Consensus 1 ~v~~ve~~-~~~~~~a---~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~--------~~~~~~ 68 (142)
+|+++|+| +.+++.| +++....++. +++++.+|+.++ +.. ..+.+|.|++..+.+ .+..++
T Consensus 50 ~v~GvD~s~~~ml~~A~~A~~~~~~~~~~-~v~~~~~d~~~l-~~~-----~~d~v~~i~~~~~~~~~~~~~~~~~~~~l 122 (225)
T 3p2e_A 50 FYIGIDPVKENLFDISKKIIKKPSKGGLS-NVVFVIAAAESL-PFE-----LKNIADSISILFPWGTLLEYVIKPNRDIL 122 (225)
T ss_dssp EEEEECSCCGGGHHHHHHHTSCGGGTCCS-SEEEECCBTTBC-CGG-----GTTCEEEEEEESCCHHHHHHHHTTCHHHH
T ss_pred EEEEEeCCHHHHHHHHHHHHHHHHHcCCC-CeEEEEcCHHHh-hhh-----ccCeEEEEEEeCCCcHHhhhhhcchHHHH
Confidence 38999999 6666666 8888788875 799999999875 221 135688888765321 245678
Q ss_pred HHHHhcccCCeEEEE
Q 032390 69 ERLMKLLKVGGIAVY 83 (142)
Q Consensus 69 ~~~~~~L~~gG~iv~ 83 (142)
+.+.+.|+|||.+++
T Consensus 123 ~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 123 SNVADLAKKEAHFEF 137 (225)
T ss_dssp HHHHTTEEEEEEEEE
T ss_pred HHHHHhcCCCcEEEE
Confidence 999999999999988
No 234
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.00 E-value=1.6e-05 Score=64.28 Aligned_cols=77 Identities=10% Similarity=0.062 Sum_probs=60.6
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCC----cEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC-------------
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDH----KINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN------------- 63 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~----~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~------------- 63 (142)
+++++|+++.+++.|+.|+...|... ++.+.++|++..... ..++||+|+.+||...
T Consensus 213 ~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~gDtL~~~~~------~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~ 286 (541)
T 2ar0_A 213 AFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRLGNTLGSDGE------NLPKAHIVATNPPFGSAAGTNITRTFVHP 286 (541)
T ss_dssp SEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEESCTTSHHHH------TSCCEEEEEECCCCTTCSSCCCCSCCSSC
T ss_pred eEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeEeCCCcccccc------cccCCeEEEECCCcccccchhhHhhcCCC
Confidence 37999999999999999998888753 388999998764322 1468999999987422
Q ss_pred ----cHHHHHHHHhcccCCeEEEE
Q 032390 64 ----YCNYHERLMKLLKVGGIAVY 83 (142)
Q Consensus 64 ----~~~~~~~~~~~L~~gG~iv~ 83 (142)
+..+++.+.++|+|||.+++
T Consensus 287 ~~~~~~~Fl~~~l~~Lk~gGr~a~ 310 (541)
T 2ar0_A 287 TSNKQLCFMQHIIETLHPGGRAAV 310 (541)
T ss_dssp CSCHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCchHHHHHHHHHHHhCCCCEEEE
Confidence 23688899999999998644
No 235
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=97.96 E-value=5.7e-06 Score=61.08 Aligned_cols=85 Identities=12% Similarity=-0.023 Sum_probs=56.6
Q ss_pred CEEEEeCChhHHHHHHHHHHHc-----------------CCC------------CcEEEEEccHHHHHHHHhhcccCCCc
Q 032390 1 MITAIDVNRETYEIGLPIIKKA-----------------GVD------------HKINFIESEALSVLDQLLKYSENEGS 51 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~-----------------~~~------------~~v~~~~~da~~~l~~~~~~~~~~~~ 51 (142)
+|+++|+++.+++.|+++++.. +.. ..++++.+|+.+.++- .....++++
T Consensus 96 ~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~-~~~~~~~~~ 174 (289)
T 2g72_A 96 DITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRARVKRVLPIDVHQPQPL-GAGSPAPLP 174 (289)
T ss_dssp EEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHHEEEEECCCTTSSSTT-CSSCSSCSS
T ss_pred eEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhhhceEEecccCCCCCc-cccccCCCC
Confidence 4899999999999999876432 100 0256777788653221 000001356
Q ss_pred eeEEEEcCC-------CcCcHHHHHHHHhcccCCeEEEEecc
Q 032390 52 FDYAFVDAD-------KDNYCNYHERLMKLLKVGGIAVYDNT 86 (142)
Q Consensus 52 fD~IfiD~~-------~~~~~~~~~~~~~~L~~gG~iv~dn~ 86 (142)
||+|++-.. ...+...++.+.+.|+|||.+++...
T Consensus 175 fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~ 216 (289)
T 2g72_A 175 ADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGA 216 (289)
T ss_dssp EEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 999998643 12456788899999999999998643
No 236
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=97.92 E-value=3.7e-06 Score=57.60 Aligned_cols=73 Identities=11% Similarity=0.148 Sum_probs=54.9
Q ss_pred EeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHH-HhhcccCCCceeEEEEcCC---C-cCcHHHHHHHHhcccCCe
Q 032390 5 IDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQ-LLKYSENEGSFDYAFVDAD---K-DNYCNYHERLMKLLKVGG 79 (142)
Q Consensus 5 ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~-~~~~~~~~~~fD~IfiD~~---~-~~~~~~~~~~~~~L~~gG 79 (142)
+|.+++|++.|+++.. .+++++++|+.+.... + ++++||+|++-.. . .+....++.+.+.|+|||
T Consensus 26 vD~s~~ml~~a~~~~~-----~~~~~~~~d~~~~~~~~~-----~~~~fD~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG 95 (176)
T 2ld4_A 26 VEALKGLVDKLQALTG-----NEGRVSVENIKQLLQSAH-----KESSFDIILSGLVPGSTTLHSAEILAEIARILRPGG 95 (176)
T ss_dssp HHHHHHHHHHHHHHTT-----TTSEEEEEEGGGGGGGCC-----CSSCEEEEEECCSTTCCCCCCHHHHHHHHHHEEEEE
T ss_pred eeCCHHHHHHHHHhcc-----cCcEEEEechhcCccccC-----CCCCEeEEEECChhhhcccCHHHHHHHHHHHCCCCE
Confidence 7889999999998752 2489999999864210 0 2568999998431 1 356889999999999999
Q ss_pred EEEEeccc
Q 032390 80 IAVYDNTL 87 (142)
Q Consensus 80 ~iv~dn~~ 87 (142)
.+++.+..
T Consensus 96 ~l~~~~~~ 103 (176)
T 2ld4_A 96 CLFLKEPV 103 (176)
T ss_dssp EEEEEEEE
T ss_pred EEEEEccc
Confidence 99985443
No 237
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=97.90 E-value=9.1e-06 Score=54.73 Aligned_cols=68 Identities=18% Similarity=0.146 Sum_probs=49.5
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHH-----HHH-HhhcccCCCceeEEEEcCCCc---Cc-------
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV-----LDQ-LLKYSENEGSFDYAFVDADKD---NY------- 64 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~-----l~~-~~~~~~~~~~fD~IfiD~~~~---~~------- 64 (142)
+++++|+++ +.+. .+++++.+|+.+. ++. + ++++||+|+++++.. ..
T Consensus 49 ~v~~~D~~~-~~~~-----------~~~~~~~~d~~~~~~~~~~~~~~-----~~~~~D~i~~~~~~~~~~~~~~~~~~~ 111 (180)
T 1ej0_A 49 RIIACDLLP-MDPI-----------VGVDFLQGDFRDELVMKALLERV-----GDSKVQVVMSDMAPNMSGTPAVDIPRA 111 (180)
T ss_dssp EEEEEESSC-CCCC-----------TTEEEEESCTTSHHHHHHHHHHH-----TTCCEEEEEECCCCCCCSCHHHHHHHH
T ss_pred eEEEEECcc-cccc-----------CcEEEEEcccccchhhhhhhccC-----CCCceeEEEECCCccccCCCccchHHH
Confidence 378899988 6432 4799999999764 111 2 246899999987532 11
Q ss_pred ----HHHHHHHHhcccCCeEEEEec
Q 032390 65 ----CNYHERLMKLLKVGGIAVYDN 85 (142)
Q Consensus 65 ----~~~~~~~~~~L~~gG~iv~dn 85 (142)
..+++.+.++|+|||.+++..
T Consensus 112 ~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (180)
T 1ej0_A 112 MYLVELALEMCRDVLAPGGSFVVKV 136 (180)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 577888899999999998743
No 238
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=97.90 E-value=6.2e-06 Score=56.54 Aligned_cols=66 Identities=14% Similarity=0.158 Sum_probs=50.6
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc------------CcHHHH
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD------------NYCNYH 68 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~------------~~~~~~ 68 (142)
+|+++|+|+.+++. .++++++++|+.+.++ .++||+|+++++.. .....+
T Consensus 46 ~v~gvD~s~~~~~~----------~~~~~~~~~d~~~~~~--------~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~ 107 (170)
T 3q87_B 46 TVVSTDLNIRALES----------HRGGNLVRADLLCSIN--------QESVDVVVFNPPYVPDTDDPIIGGGYLGREVI 107 (170)
T ss_dssp EEEEEESCHHHHHT----------CSSSCEEECSTTTTBC--------GGGCSEEEECCCCBTTCCCTTTBCCGGGCHHH
T ss_pred cEEEEECCHHHHhc----------ccCCeEEECChhhhcc--------cCCCCEEEECCCCccCCccccccCCcchHHHH
Confidence 48999999999987 3579999999987321 36899999987642 124567
Q ss_pred HHHHhcccCCeEEEEec
Q 032390 69 ERLMKLLKVGGIAVYDN 85 (142)
Q Consensus 69 ~~~~~~L~~gG~iv~dn 85 (142)
+.+.+.+ |||.+++..
T Consensus 108 ~~~~~~l-pgG~l~~~~ 123 (170)
T 3q87_B 108 DRFVDAV-TVGMLYLLV 123 (170)
T ss_dssp HHHHHHC-CSSEEEEEE
T ss_pred HHHHhhC-CCCEEEEEE
Confidence 7777777 999998753
No 239
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=97.88 E-value=1.7e-05 Score=65.93 Aligned_cols=78 Identities=14% Similarity=0.118 Sum_probs=56.7
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC-------cHHHHHHHH-
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN-------YCNYHERLM- 72 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~-------~~~~~~~~~- 72 (142)
+|+++|+|+.+++.|+.|++.+|+.+.+++.++|+.++.... ..++||+|+++||... ...+++.+.
T Consensus 258 ~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~-----~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~ 332 (703)
T 3v97_A 258 HFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPL-----PKGPYGTVLSNPPYGERLDSEPALIALHSLLGR 332 (703)
T ss_dssp CEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSC-----TTCCCCEEEECCCCCC---CCHHHHHHHHHHHH
T ss_pred cEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCcccc-----ccCCCCEEEeCCCccccccchhHHHHHHHHHHH
Confidence 489999999999999999999999888999999998742111 1237999999998431 223333333
Q ss_pred --hcccCCeEEEE
Q 032390 73 --KLLKVGGIAVY 83 (142)
Q Consensus 73 --~~L~~gG~iv~ 83 (142)
+.+.|||.+.+
T Consensus 333 ~lk~~~~g~~~~i 345 (703)
T 3v97_A 333 IMKNQFGGWNLSL 345 (703)
T ss_dssp HHHHHCTTCEEEE
T ss_pred HHHhhCCCCeEEE
Confidence 34457887643
No 240
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=97.87 E-value=1.2e-05 Score=59.72 Aligned_cols=78 Identities=23% Similarity=0.282 Sum_probs=54.9
Q ss_pred CEEEEeCChhHHHHHHHHHH--------------H---------cC-------CCCcEEEEEccHHHHHHHHhhcccCCC
Q 032390 1 MITAIDVNRETYEIGLPIIK--------------K---------AG-------VDHKINFIESEALSVLDQLLKYSENEG 50 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~--------------~---------~~-------~~~~v~~~~~da~~~l~~~~~~~~~~~ 50 (142)
+|+++|+|+++++.|++++- + .| +.++|+|.++|..+. .+. ..+
T Consensus 139 ~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~~~v~~~lr~~V~F~~~dl~~~--~~~----~~~ 212 (274)
T 1af7_A 139 KVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGLVRVRQELANYVEFSSVNLLEK--QYN----VPG 212 (274)
T ss_dssp EEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSEEEECHHHHTTEEEEECCTTCS--SCC----CCC
T ss_pred EEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCceeechhhcccCeEEecccCCC--CCC----cCC
Confidence 48999999999999998741 0 00 013699999998762 110 136
Q ss_pred ceeEEEEcCCC-----cCcHHHHHHHHhcccCCeEEEEe
Q 032390 51 SFDYAFVDADK-----DNYCNYHERLMKLLKVGGIAVYD 84 (142)
Q Consensus 51 ~fD~IfiD~~~-----~~~~~~~~~~~~~L~~gG~iv~d 84 (142)
+||+|++-... ......++.+.+.|+|||.+++.
T Consensus 213 ~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 213 PFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp CEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred CeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 89999984321 12256788888999999999874
No 241
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=97.86 E-value=1.4e-05 Score=58.97 Aligned_cols=74 Identities=15% Similarity=0.202 Sum_probs=49.3
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc-----CcHHHHHHHHhcc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD-----NYCNYHERLMKLL 75 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~-----~~~~~~~~~~~~L 75 (142)
+|+++|+|+.|++.|++++.... -.+++...+.. ..... .++||+|+++.... .....+..+.++|
T Consensus 69 ~V~gvD~S~~ml~~Ar~~~~~~~--v~~~~~~~~~~-~~~~~------~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL 139 (261)
T 3iv6_A 69 SVTVFDFSQRMCDDLAEALADRC--VTIDLLDITAE-IPKEL------AGHFDFVLNDRLINRFTTEEARRACLGMLSLV 139 (261)
T ss_dssp EEEEEESCHHHHHHHHHHTSSSC--CEEEECCTTSC-CCGGG------TTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH
T ss_pred EEEEEECCHHHHHHHHHHHHhcc--ceeeeeecccc-ccccc------CCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC
Confidence 48999999999999999875541 12333322220 00111 46899999987432 2345778888899
Q ss_pred cCCeEEEEe
Q 032390 76 KVGGIAVYD 84 (142)
Q Consensus 76 ~~gG~iv~d 84 (142)
|||.+++.
T Consensus 140 -PGG~l~lS 147 (261)
T 3iv6_A 140 -GSGTVRAS 147 (261)
T ss_dssp -TTSEEEEE
T ss_pred -cCcEEEEE
Confidence 99999875
No 242
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=97.83 E-value=3.2e-05 Score=57.46 Aligned_cols=53 Identities=11% Similarity=0.119 Sum_probs=44.5
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD 62 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~ 62 (142)
+|+++|+|+.+++.|++++...+..++++++++|+.+. . -..||+|+.+.+..
T Consensus 52 ~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~--~-------~~~fD~vv~nlpy~ 104 (285)
T 1zq9_A 52 KVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKT--D-------LPFFDTCVANLPYQ 104 (285)
T ss_dssp EEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTS--C-------CCCCSEEEEECCGG
T ss_pred EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecc--c-------chhhcEEEEecCcc
Confidence 48999999999999999998777766899999999764 1 24799999988754
No 243
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=97.80 E-value=2.1e-05 Score=55.68 Aligned_cols=69 Identities=19% Similarity=0.277 Sum_probs=54.5
Q ss_pred EEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCC---CcCcHHHHHHHHhcccCCe
Q 032390 3 TAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDAD---KDNYCNYHERLMKLLKVGG 79 (142)
Q Consensus 3 ~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~---~~~~~~~~~~~~~~L~~gG 79 (142)
+++|+++.+++.|+++ +++++.+|+.+. + + ..++||+|++... .++...+++.+.+.|+|||
T Consensus 69 ~~vD~s~~~~~~a~~~--------~~~~~~~d~~~~-~-~-----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG 133 (219)
T 1vlm_A 69 IGVEPSERMAEIARKR--------GVFVLKGTAENL-P-L-----KDESFDFALMVTTICFVDDPERALKEAYRILKKGG 133 (219)
T ss_dssp EEEESCHHHHHHHHHT--------TCEEEECBTTBC-C-S-----CTTCEEEEEEESCGGGSSCHHHHHHHHHHHEEEEE
T ss_pred hccCCCHHHHHHHHhc--------CCEEEEcccccC-C-C-----CCCCeeEEEEcchHhhccCHHHHHHHHHHHcCCCc
Confidence 6899999999999986 588999998653 1 1 2468999998754 2345788999999999999
Q ss_pred EEEEecc
Q 032390 80 IAVYDNT 86 (142)
Q Consensus 80 ~iv~dn~ 86 (142)
.+++...
T Consensus 134 ~l~i~~~ 140 (219)
T 1vlm_A 134 YLIVGIV 140 (219)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 9988643
No 244
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=97.78 E-value=4.4e-05 Score=56.76 Aligned_cols=85 Identities=14% Similarity=0.135 Sum_probs=58.2
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCcee-----EEEEcCCCc------CcHHHHH
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD-----YAFVDADKD------NYCNYHE 69 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD-----~IfiD~~~~------~~~~~~~ 69 (142)
+|+++|.||.|++.||+.+...+ ..+++++++|+.+.-.-+... ...+.|| .|++.+... ....++.
T Consensus 107 rVv~VD~sp~mLa~Ar~~l~~~~-~~~~~~v~aD~~~~~~~l~~~-~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~ 184 (277)
T 3giw_A 107 RVVYVDNDPIVLTLSQGLLASTP-EGRTAYVEADMLDPASILDAP-ELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVR 184 (277)
T ss_dssp EEEEEECCHHHHHTTHHHHCCCS-SSEEEEEECCTTCHHHHHTCH-HHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHH
T ss_pred EEEEEeCChHHHHHHHHHhccCC-CCcEEEEEecccChhhhhccc-ccccccCcCCcchHHhhhhHhcCCchhhHHHHHH
Confidence 48999999999999999886543 247999999998752111000 0013455 466655311 1356889
Q ss_pred HHHhcccCCeEEEEeccc
Q 032390 70 RLMKLLKVGGIAVYDNTL 87 (142)
Q Consensus 70 ~~~~~L~~gG~iv~dn~~ 87 (142)
.+.+.|+|||.+++....
T Consensus 185 ~l~~~L~PGG~Lvls~~~ 202 (277)
T 3giw_A 185 RLLEPLPSGSYLAMSIGT 202 (277)
T ss_dssp HHHTTSCTTCEEEEEEEC
T ss_pred HHHHhCCCCcEEEEEecc
Confidence 999999999999987654
No 245
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=97.76 E-value=9.6e-06 Score=57.18 Aligned_cols=72 Identities=13% Similarity=0.095 Sum_probs=53.9
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC---cCcHHHHHHHHhcccC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK---DNYCNYHERLMKLLKV 77 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~---~~~~~~~~~~~~~L~~ 77 (142)
+++++|+++.+++.|++++ .+++.+|+.+....+ .+++||+|++.... .+...+++.+.+.|+|
T Consensus 56 ~~~~~D~~~~~~~~~~~~~--------~~~~~~d~~~~~~~~-----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~~ 122 (230)
T 3cc8_A 56 RVSGIEAFPEAAEQAKEKL--------DHVVLGDIETMDMPY-----EEEQFDCVIFGDVLEHLFDPWAVIEKVKPYIKQ 122 (230)
T ss_dssp EEEEEESSHHHHHHHHTTS--------SEEEESCTTTCCCCS-----CTTCEEEEEEESCGGGSSCHHHHHHHTGGGEEE
T ss_pred eEEEEeCCHHHHHHHHHhC--------CcEEEcchhhcCCCC-----CCCccCEEEECChhhhcCCHHHHHHHHHHHcCC
Confidence 4799999999999998754 278888886531111 24689999986532 2456788999999999
Q ss_pred CeEEEEec
Q 032390 78 GGIAVYDN 85 (142)
Q Consensus 78 gG~iv~dn 85 (142)
||.+++..
T Consensus 123 gG~l~~~~ 130 (230)
T 3cc8_A 123 NGVILASI 130 (230)
T ss_dssp EEEEEEEE
T ss_pred CCEEEEEe
Confidence 99998853
No 246
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=97.74 E-value=2e-05 Score=61.17 Aligned_cols=75 Identities=13% Similarity=0.187 Sum_probs=52.7
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCC---CcCcHHHHHHHHhcccC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDAD---KDNYCNYHERLMKLLKV 77 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~---~~~~~~~~~~~~~~L~~ 77 (142)
+|+++|+++.+++.|+++ +......++..+..+.++.. +++||+|++... .++...+++.+.++|+|
T Consensus 131 ~v~gvD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~l~~~------~~~fD~I~~~~vl~h~~d~~~~l~~~~r~Lkp 200 (416)
T 4e2x_A 131 RHLGFEPSSGVAAKAREK----GIRVRTDFFEKATADDVRRT------EGPANVIYAANTLCHIPYVQSVLEGVDALLAP 200 (416)
T ss_dssp EEEEECCCHHHHHHHHTT----TCCEECSCCSHHHHHHHHHH------HCCEEEEEEESCGGGCTTHHHHHHHHHHHEEE
T ss_pred cEEEECCCHHHHHHHHHc----CCCcceeeechhhHhhcccC------CCCEEEEEECChHHhcCCHHHHHHHHHHHcCC
Confidence 479999999999999875 44332222323333333321 478999998653 23567889999999999
Q ss_pred CeEEEEec
Q 032390 78 GGIAVYDN 85 (142)
Q Consensus 78 gG~iv~dn 85 (142)
||++++..
T Consensus 201 gG~l~i~~ 208 (416)
T 4e2x_A 201 DGVFVFED 208 (416)
T ss_dssp EEEEEEEE
T ss_pred CeEEEEEe
Confidence 99999864
No 247
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=97.74 E-value=2.4e-05 Score=56.84 Aligned_cols=71 Identities=17% Similarity=0.260 Sum_probs=54.2
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCC----CcCcHHHHHHHHhccc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDAD----KDNYCNYHERLMKLLK 76 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~----~~~~~~~~~~~~~~L~ 76 (142)
+|+++|+|+.+++.|+++.. . .++.+|+.+. + + +.++||+|++... ..+...+++.+.+.|+
T Consensus 78 ~v~gvD~s~~~l~~a~~~~~-----~--~~~~~d~~~~-~-~-----~~~~fD~v~~~~~~~~~~~~~~~~l~~~~~~Lk 143 (260)
T 2avn_A 78 EVVLVDPSKEMLEVAREKGV-----K--NVVEAKAEDL-P-F-----PSGAFEAVLALGDVLSYVENKDKAFSEIRRVLV 143 (260)
T ss_dssp EEEEEESCHHHHHHHHHHTC-----S--CEEECCTTSC-C-S-----CTTCEEEEEECSSHHHHCSCHHHHHHHHHHHEE
T ss_pred eEEEEeCCHHHHHHHHhhcC-----C--CEEECcHHHC-C-C-----CCCCEEEEEEcchhhhccccHHHHHHHHHHHcC
Confidence 47999999999999998753 1 2788888653 1 1 2568999998642 1336778899999999
Q ss_pred CCeEEEEec
Q 032390 77 VGGIAVYDN 85 (142)
Q Consensus 77 ~gG~iv~dn 85 (142)
|||.+++..
T Consensus 144 pgG~l~~~~ 152 (260)
T 2avn_A 144 PDGLLIATV 152 (260)
T ss_dssp EEEEEEEEE
T ss_pred CCeEEEEEe
Confidence 999998753
No 248
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=97.73 E-value=1.1e-05 Score=57.08 Aligned_cols=75 Identities=12% Similarity=0.102 Sum_probs=52.4
Q ss_pred CEEEEeCChhHHHHH----HHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC--------cCcHHHH
Q 032390 1 MITAIDVNRETYEIG----LPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK--------DNYCNYH 68 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a----~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~--------~~~~~~~ 68 (142)
+|+++|+++++++.+ +++....++. +++++++|+.++ +. ..+. |.|++.... .+...++
T Consensus 53 ~v~gvD~s~~~l~~~~~~a~~~~~~~~~~-~v~~~~~d~~~l-~~------~~~~-d~v~~~~~~~~~~~~~~~~~~~~l 123 (218)
T 3mq2_A 53 LVVALDADKSRMEKISAKAAAKPAKGGLP-NLLYLWATAERL-PP------LSGV-GELHVLMPWGSLLRGVLGSSPEML 123 (218)
T ss_dssp EEEEEESCGGGGHHHHHHHTSCGGGTCCT-TEEEEECCSTTC-CS------CCCE-EEEEEESCCHHHHHHHHTSSSHHH
T ss_pred EEEEEECCHHHHHHHHHHHHHhhhhcCCC-ceEEEecchhhC-CC------CCCC-CEEEEEccchhhhhhhhccHHHHH
Confidence 489999999988753 3333345553 799999999873 21 1344 777754421 1226788
Q ss_pred HHHHhcccCCeEEEEe
Q 032390 69 ERLMKLLKVGGIAVYD 84 (142)
Q Consensus 69 ~~~~~~L~~gG~iv~d 84 (142)
+.+.+.|+|||.+++.
T Consensus 124 ~~~~~~LkpgG~l~~~ 139 (218)
T 3mq2_A 124 RGMAAVCRPGASFLVA 139 (218)
T ss_dssp HHHHHTEEEEEEEEEE
T ss_pred HHHHHHcCCCcEEEEE
Confidence 9999999999999884
No 249
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=97.68 E-value=5.3e-05 Score=56.67 Aligned_cols=52 Identities=13% Similarity=0.140 Sum_probs=40.3
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD 62 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~ 62 (142)
+|+++|+|+.+++.|+++++..++ ++++++.+|+.+. +.++||+|+++.+..
T Consensus 66 ~v~~vDi~~~~~~~a~~~~~~~~~-~~v~~~~~D~~~~---------~~~~~D~Vv~n~py~ 117 (299)
T 2h1r_A 66 KVITIDIDSRMISEVKKRCLYEGY-NNLEVYEGDAIKT---------VFPKFDVCTANIPYK 117 (299)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTC-CCEEC----CCSS---------CCCCCSEEEEECCGG
T ss_pred EEEEEECCHHHHHHHHHHHHHcCC-CceEEEECchhhC---------CcccCCEEEEcCCcc
Confidence 489999999999999999988877 5799999998764 135799999998754
No 250
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=97.67 E-value=1.3e-05 Score=58.40 Aligned_cols=67 Identities=15% Similarity=0.187 Sum_probs=52.0
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|+++|+++.+++.|+++. .++++..+|+.+. + + .+++||+|++-.. ...++.+.+.|+|||.
T Consensus 111 ~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~-~-~-----~~~~fD~v~~~~~----~~~l~~~~~~L~pgG~ 173 (269)
T 1p91_A 111 TTFGLDVSKVAIKAAAKRY------PQVTFCVASSHRL-P-F-----SDTSMDAIIRIYA----PCKAEELARVVKPGGW 173 (269)
T ss_dssp EEEEEESCHHHHHHHHHHC------TTSEEEECCTTSC-S-B-----CTTCEEEEEEESC----CCCHHHHHHHEEEEEE
T ss_pred eEEEEeCCHHHHHHHHHhC------CCcEEEEcchhhC-C-C-----CCCceeEEEEeCC----hhhHHHHHHhcCCCcE
Confidence 3799999999999998864 3689999998653 1 1 2468999997543 2347888899999999
Q ss_pred EEEe
Q 032390 81 AVYD 84 (142)
Q Consensus 81 iv~d 84 (142)
+++.
T Consensus 174 l~~~ 177 (269)
T 1p91_A 174 VITA 177 (269)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8874
No 251
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.65 E-value=5.9e-05 Score=55.27 Aligned_cols=53 Identities=15% Similarity=0.177 Sum_probs=41.0
Q ss_pred cEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC-----------------cHHHHHHHHhcccCCeEEEEe
Q 032390 27 KINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN-----------------YCNYHERLMKLLKVGGIAVYD 84 (142)
Q Consensus 27 ~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~-----------------~~~~~~~~~~~L~~gG~iv~d 84 (142)
..++++||+.+.++.+. +++||+||+|||... ...+++.+.++|+|||.+++.
T Consensus 4 ~~~l~~gD~~~~l~~l~-----~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~ 73 (260)
T 1g60_A 4 INKIHQMNCFDFLDQVE-----NKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIF 73 (260)
T ss_dssp SSSEEECCHHHHHHHSC-----TTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCeEEechHHHHHHhcc-----ccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 45789999999998763 568999999998421 134556677899999998875
No 252
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=97.65 E-value=8.3e-05 Score=55.88 Aligned_cols=58 Identities=17% Similarity=0.151 Sum_probs=45.2
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD 62 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~ 62 (142)
+|+++|+|+++++.|+++++..| ++++++++|+.++...+.+. ...+||.|++|++..
T Consensus 52 ~VigvD~d~~al~~A~~~~~~~g--~~v~~v~~d~~~l~~~l~~~--g~~~~D~Vl~D~gvS 109 (301)
T 1m6y_A 52 RIIGIDVDSEVLRIAEEKLKEFS--DRVSLFKVSYREADFLLKTL--GIEKVDGILMDLGVS 109 (301)
T ss_dssp EEEEEESCHHHHHHHHHHTGGGT--TTEEEEECCGGGHHHHHHHT--TCSCEEEEEEECSCC
T ss_pred EEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCHHHHHHHHHhc--CCCCCCEEEEcCccc
Confidence 48999999999999999998887 58999999987753222210 115799999998743
No 253
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=97.63 E-value=0.00031 Score=56.80 Aligned_cols=76 Identities=14% Similarity=0.165 Sum_probs=58.7
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCC-CcEEEEEccHHHHH-HHHhhcccCCCceeEEEEcCCCcC----------------
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVD-HKINFIESEALSVL-DQLLKYSENEGSFDYAFVDADKDN---------------- 63 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~-~~v~~~~~da~~~l-~~~~~~~~~~~~fD~IfiD~~~~~---------------- 63 (142)
++++|+++.++..|+.|+...|.. +++.+.++|.+..- +.. ...+||+|+.+||...
T Consensus 251 i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~-----~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~ 325 (542)
T 3lkd_A 251 YFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQ-----EPTNFDGVLMNPPYSAKWSASSGFMDDPRFSP 325 (542)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCS-----SCCCBSEEEECCCTTCCCCCCGGGGGSTTTGG
T ss_pred EEEEECcHHHHHHHHHHHHHcCCCcCccceEecceeccccccc-----ccccccEEEecCCcCCccccchhhhhhhhhhh
Confidence 789999999999999999999885 57999999987530 111 2468999999886310
Q ss_pred c----------HHHHHHHHhccc-CCeEEE
Q 032390 64 Y----------CNYHERLMKLLK-VGGIAV 82 (142)
Q Consensus 64 ~----------~~~~~~~~~~L~-~gG~iv 82 (142)
| ..+++.+...|+ +||.+.
T Consensus 326 ~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a 355 (542)
T 3lkd_A 326 FGKLAPKSKADFAFLLHGYYHLKQDNGVMA 355 (542)
T ss_dssp GSSCCCTTCCHHHHHHHHHHTBCTTTCEEE
T ss_pred hhhcCCCchhhHHHHHHHHHHhCCCceeEE
Confidence 1 237888999999 999863
No 254
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=97.59 E-value=1.1e-05 Score=58.83 Aligned_cols=69 Identities=10% Similarity=0.128 Sum_probs=53.4
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC---cCcHHHHHHHHhcccC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK---DNYCNYHERLMKLLKV 77 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~---~~~~~~~~~~~~~L~~ 77 (142)
+|+++|+++.+++.|+++. +++++.+|+.++ + + ++++||+|++-... .+...+++.+.+.|+
T Consensus 58 ~v~gvD~s~~~~~~a~~~~-------~~~~~~~d~~~~-~-~-----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk- 122 (261)
T 3ege_A 58 FVYAVEPSIVMRQQAVVHP-------QVEWFTGYAENL-A-L-----PDKSVDGVISILAIHHFSHLEKSFQEMQRIIR- 122 (261)
T ss_dssp EEEEECSCHHHHHSSCCCT-------TEEEECCCTTSC-C-S-----CTTCBSEEEEESCGGGCSSHHHHHHHHHHHBC-
T ss_pred EEEEEeCCHHHHHHHHhcc-------CCEEEECchhhC-C-C-----CCCCEeEEEEcchHhhccCHHHHHHHHHHHhC-
Confidence 4899999999998877643 799999999763 2 2 25789999986532 456788999999999
Q ss_pred CeEEEEe
Q 032390 78 GGIAVYD 84 (142)
Q Consensus 78 gG~iv~d 84 (142)
||.+++-
T Consensus 123 gG~~~~~ 129 (261)
T 3ege_A 123 DGTIVLL 129 (261)
T ss_dssp SSCEEEE
T ss_pred CcEEEEE
Confidence 9955543
No 255
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=97.56 E-value=9.5e-05 Score=55.91 Aligned_cols=54 Identities=19% Similarity=0.241 Sum_probs=42.4
Q ss_pred CcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC-----------------cHHHHHHHHhcccCCeEEEEe
Q 032390 26 HKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN-----------------YCNYHERLMKLLKVGGIAVYD 84 (142)
Q Consensus 26 ~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~-----------------~~~~~~~~~~~L~~gG~iv~d 84 (142)
++.++++||+.+.++.+ ++++||+||+|||... +...++.+.++|+|||.+++.
T Consensus 13 ~~~~ii~gD~~~~l~~l-----~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~ 83 (323)
T 1boo_A 13 SNGSMYIGDSLELLESF-----PEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVD 83 (323)
T ss_dssp SSEEEEESCHHHHGGGS-----CSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCceEEeCcHHHHHhhC-----CCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEE
Confidence 57899999999988765 2578999999998521 244566777899999998773
No 256
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=97.52 E-value=0.00017 Score=54.59 Aligned_cols=54 Identities=15% Similarity=0.174 Sum_probs=41.7
Q ss_pred CcEEEE-EccHHHHHHHHhhcccCCCceeEEEEcCCCcC----------c----HHHHHHHHhcccCCeEEEEe
Q 032390 26 HKINFI-ESEALSVLDQLLKYSENEGSFDYAFVDADKDN----------Y----CNYHERLMKLLKVGGIAVYD 84 (142)
Q Consensus 26 ~~v~~~-~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~----------~----~~~~~~~~~~L~~gG~iv~d 84 (142)
...+++ +||+.+.++.+. +++||+||+|||... | ...+..+.++|+|||.+++.
T Consensus 37 ~~~~l~i~gD~l~~L~~l~-----~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~ 105 (319)
T 1eg2_A 37 TTRHVYDVCDCLDTLAKLP-----DDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIF 105 (319)
T ss_dssp CEEEEEEECCHHHHHHTSC-----TTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccceEEECCcHHHHHHhCc-----cCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 347888 999999998762 568999999998532 2 34456667899999999875
No 257
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.49 E-value=4.7e-05 Score=61.59 Aligned_cols=75 Identities=11% Similarity=0.123 Sum_probs=58.3
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC------------------
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN------------------ 63 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~------------------ 63 (142)
++++|+++.+++.|+.|+...|+..++.+.++|.+..- .. ...+||+|+.+||...
T Consensus 286 i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~-~~-----~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~ 359 (544)
T 3khk_A 286 VYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDD-QH-----PDLRADFVMTNPPFNMKDWWHEKLADDPRWTINT 359 (544)
T ss_dssp EEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSC-SC-----TTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECC
T ss_pred EEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCc-cc-----ccccccEEEECCCcCCccccchhhhhhhhhhcCc
Confidence 78999999999999999999998766666889876431 11 1468999999987431
Q ss_pred --------------cHHHHHHHHhcccCCeEEE
Q 032390 64 --------------YCNYHERLMKLLKVGGIAV 82 (142)
Q Consensus 64 --------------~~~~~~~~~~~L~~gG~iv 82 (142)
...+++.+...|+|||.++
T Consensus 360 ~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a 392 (544)
T 3khk_A 360 NGEKRILTPPTGNANFAWMLHMLYHLAPTGSMA 392 (544)
T ss_dssp C--CEECCCCTTCTHHHHHHHHHHTEEEEEEEE
T ss_pred ccccccccCCCcchhHHHHHHHHHHhccCceEE
Confidence 0257888999999999853
No 258
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.45 E-value=0.00031 Score=58.31 Aligned_cols=82 Identities=11% Similarity=0.016 Sum_probs=59.4
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCC-----CcCcHHHHHHHHhcc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDAD-----KDNYCNYHERLMKLL 75 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~-----~~~~~~~~~~~~~~L 75 (142)
+|++||.|+.++..++.... .|+.++|+++++|+.++-..... ...++.|+|+..-- .+..++.+..+.+.|
T Consensus 448 kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev~lp~~~--~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~L 524 (745)
T 3ua3_A 448 KLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSLPGIAKD--RGFEQPDIIVSELLGSFGDNELSPECLDGVTGFL 524 (745)
T ss_dssp EEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGHHHHHHH--TTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGS
T ss_pred EEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhccccccc--CCCCcccEEEEeccccccchhccHHHHHHHHHhC
Confidence 48999999988876666554 78889999999999987321100 12478999997542 123456777777899
Q ss_pred cCCeEEEEec
Q 032390 76 KVGGIAVYDN 85 (142)
Q Consensus 76 ~~gG~iv~dn 85 (142)
+|||+++-+.
T Consensus 525 kp~Gi~iP~~ 534 (745)
T 3ua3_A 525 KPTTISIPQK 534 (745)
T ss_dssp CTTCEEESCE
T ss_pred CCCcEEECCc
Confidence 9999987543
No 259
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=97.45 E-value=3.7e-05 Score=59.48 Aligned_cols=65 Identities=18% Similarity=0.316 Sum_probs=50.7
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc------------------
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD------------------ 62 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~------------------ 62 (142)
+++++|+++.+++.| .+++++++|+.++. ..++||+|+++|+..
T Consensus 66 ~i~gvDi~~~~~~~a----------~~~~~~~~D~~~~~--------~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~ 127 (421)
T 2ih2_A 66 RFVGVEIDPKALDLP----------PWAEGILADFLLWE--------PGEAFDLILGNPPYGIVGEASKYPIHVFKAVKD 127 (421)
T ss_dssp EEEEEESCTTTCCCC----------TTEEEEESCGGGCC--------CSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHH
T ss_pred eEEEEECCHHHHHhC----------CCCcEEeCChhhcC--------ccCCCCEEEECcCccCcccccccccccCHHHHH
Confidence 378999999999877 47999999998742 146899999987531
Q ss_pred --------------CcHHHHHHHHhcccCCeEEEE
Q 032390 63 --------------NYCNYHERLMKLLKVGGIAVY 83 (142)
Q Consensus 63 --------------~~~~~~~~~~~~L~~gG~iv~ 83 (142)
.+..+++.+.++|+|||.+++
T Consensus 128 ~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~ 162 (421)
T 2ih2_A 128 LYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVF 162 (421)
T ss_dssp HHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEE
T ss_pred HHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEE
Confidence 022567888899999999766
No 260
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=97.44 E-value=0.00029 Score=49.22 Aligned_cols=72 Identities=18% Similarity=0.226 Sum_probs=46.3
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHH--HHHHhhccc--CCCceeEEEEcCCCcC-------------
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV--LDQLLKYSE--NEGSFDYAFVDADKDN------------- 63 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~--l~~~~~~~~--~~~~fD~IfiD~~~~~------------- 63 (142)
+|+++|+++.. .. ++++++++|+.+. ...+.+... ..++||+|++|+....
T Consensus 49 ~V~gvD~~~~~-----------~~-~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~ 116 (191)
T 3dou_A 49 KIISIDLQEME-----------EI-AGVRFIRCDIFKETIFDDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQ 116 (191)
T ss_dssp EEEEEESSCCC-----------CC-TTCEEEECCTTSSSHHHHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHH
T ss_pred cEEEEeccccc-----------cC-CCeEEEEccccCHHHHHHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHH
Confidence 48999999852 22 4799999998642 111100000 0148999999974311
Q ss_pred -cHHHHHHHHhcccCCeEEEEe
Q 032390 64 -YCNYHERLMKLLKVGGIAVYD 84 (142)
Q Consensus 64 -~~~~~~~~~~~L~~gG~iv~d 84 (142)
....++.+.++|+|||.+++.
T Consensus 117 l~~~~l~~a~~~LkpGG~lv~k 138 (191)
T 3dou_A 117 IGQRVMEIAVRYLRNGGNVLLK 138 (191)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHHHccCCCEEEEE
Confidence 134566677899999999975
No 261
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=97.40 E-value=8.5e-05 Score=55.55 Aligned_cols=62 Identities=15% Similarity=0.197 Sum_probs=47.1
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEE-EEccHHHHHHHHhhcccCCCceeEEEEcCCCc--------------CcH
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINF-IESEALSVLDQLLKYSENEGSFDYAFVDADKD--------------NYC 65 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~-~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~--------------~~~ 65 (142)
+|+++|+++. + +++++ +++|+.+.. + .++||+|++|.... .+.
T Consensus 94 ~V~gvDis~~-------------v-~~v~~~i~gD~~~~~--~------~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~ 151 (290)
T 2xyq_A 94 LLVDSDLNDF-------------V-SDADSTLIGDCATVH--T------ANKWDLIISDMYDPRTKHVTKENDSKEGFFT 151 (290)
T ss_dssp EEEEEESSCC-------------B-CSSSEEEESCGGGCC--C------SSCEEEEEECCCCCC---CCSCCCCCCTHHH
T ss_pred EEEEEECCCC-------------C-CCCEEEEECccccCC--c------cCcccEEEEcCCccccccccccccchHHHHH
Confidence 4899999998 1 36888 999997631 1 35799999985321 134
Q ss_pred HHHHHHHhcccCCeEEEEe
Q 032390 66 NYHERLMKLLKVGGIAVYD 84 (142)
Q Consensus 66 ~~~~~~~~~L~~gG~iv~d 84 (142)
..++.+.+.|+|||.+++.
T Consensus 152 ~~l~~a~r~LkpGG~~v~~ 170 (290)
T 2xyq_A 152 YLCGFIKQKLALGGSIAVK 170 (290)
T ss_dssp HHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCcEEEEE
Confidence 6788889999999999986
No 262
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.36 E-value=0.00029 Score=52.50 Aligned_cols=54 Identities=20% Similarity=0.179 Sum_probs=40.3
Q ss_pred CcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc---C-------------c-------HHHHHHHHhcccCCeEEE
Q 032390 26 HKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD---N-------------Y-------CNYHERLMKLLKVGGIAV 82 (142)
Q Consensus 26 ~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~---~-------------~-------~~~~~~~~~~L~~gG~iv 82 (142)
.++++++||+.+.++.+ ++++||+|+.|||.. . | ..+++.+.++|+|||.++
T Consensus 20 ~~~~i~~gD~~~~l~~l-----~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~ 94 (297)
T 2zig_A 20 GVHRLHVGDAREVLASF-----PEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLV 94 (297)
T ss_dssp -CEEEEESCHHHHHTTS-----CTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred cCCEEEECcHHHHHhhC-----CCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEE
Confidence 46899999999988765 257899999999852 1 1 234556778999999986
Q ss_pred Ee
Q 032390 83 YD 84 (142)
Q Consensus 83 ~d 84 (142)
+.
T Consensus 95 i~ 96 (297)
T 2zig_A 95 IV 96 (297)
T ss_dssp EE
T ss_pred EE
Confidence 63
No 263
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=97.33 E-value=0.00037 Score=53.11 Aligned_cols=75 Identities=19% Similarity=0.180 Sum_probs=53.8
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCC-----CcCcHHHHHHHHhccc
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDAD-----KDNYCNYHERLMKLLK 76 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~-----~~~~~~~~~~~~~~L~ 76 (142)
++..|. |++++.|++++...+ .+||+++.+|..+. +...+|++++-.- .+....+++.+.+.|+
T Consensus 206 ~~~~dl-p~v~~~a~~~~~~~~-~~rv~~~~gD~~~~---------~~~~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~ 274 (353)
T 4a6d_A 206 ITVFDI-PEVVWTAKQHFSFQE-EEQIDFQEGDFFKD---------PLPEADLYILARVLHDWADGKCSHLLERIYHTCK 274 (353)
T ss_dssp EEEEEC-HHHHHHHHHHSCC---CCSEEEEESCTTTS---------CCCCCSEEEEESSGGGSCHHHHHHHHHHHHHHCC
T ss_pred eEeccC-HHHHHHHHHhhhhcc-cCceeeecCccccC---------CCCCceEEEeeeecccCCHHHHHHHHHHHHhhCC
Confidence 456665 899999999886554 57999999998642 1346899998432 2223567899999999
Q ss_pred CCeEEEEeccc
Q 032390 77 VGGIAVYDNTL 87 (142)
Q Consensus 77 ~gG~iv~dn~~ 87 (142)
|||.+++-+..
T Consensus 275 pgg~lli~e~~ 285 (353)
T 4a6d_A 275 PGGGILVIESL 285 (353)
T ss_dssp TTCEEEEEECC
T ss_pred CCCEEEEEEee
Confidence 99987765444
No 264
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=97.28 E-value=1.7e-05 Score=59.44 Aligned_cols=72 Identities=22% Similarity=0.218 Sum_probs=50.1
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEE-ccHHHHHH-HHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIE-SEALSVLD-QLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVG 78 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~-~da~~~l~-~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~g 78 (142)
+|+++|+++.|++.+.++ ..++.... .++...-. .+ +...||+|++|.........+..+.++|+||
T Consensus 110 ~V~aVDvs~~mL~~a~r~------~~rv~~~~~~ni~~l~~~~l-----~~~~fD~v~~d~sf~sl~~vL~e~~rvLkpG 178 (291)
T 3hp7_A 110 LVYAVDVGTNQLVWKLRQ------DDRVRSMEQYNFRYAEPVDF-----TEGLPSFASIDVSFISLNLILPALAKILVDG 178 (291)
T ss_dssp EEEEECSSSSCSCHHHHT------CTTEEEECSCCGGGCCGGGC-----TTCCCSEEEECCSSSCGGGTHHHHHHHSCTT
T ss_pred EEEEEECCHHHHHHHHHh------CcccceecccCceecchhhC-----CCCCCCEEEEEeeHhhHHHHHHHHHHHcCcC
Confidence 489999999999885432 13444432 34332111 11 1335999999987666788899999999999
Q ss_pred eEEEE
Q 032390 79 GIAVY 83 (142)
Q Consensus 79 G~iv~ 83 (142)
|.+++
T Consensus 179 G~lv~ 183 (291)
T 3hp7_A 179 GQVVA 183 (291)
T ss_dssp CEEEE
T ss_pred CEEEE
Confidence 99987
No 265
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=97.28 E-value=7.2e-05 Score=56.77 Aligned_cols=74 Identities=9% Similarity=0.091 Sum_probs=52.1
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC-----cCcHHHHHHHHhccc
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK-----DNYCNYHERLMKLLK 76 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~-----~~~~~~~~~~~~~L~ 76 (142)
++.+|. +.++. +++++..+..++++++.+|+.+ .+ + +||+|++-... ......++.+.+.|+
T Consensus 211 ~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~~---~~------p-~~D~v~~~~vlh~~~d~~~~~~L~~~~~~Lk 277 (348)
T 3lst_A 211 GVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFLR---EV------P-HADVHVLKRILHNWGDEDSVRILTNCRRVMP 277 (348)
T ss_dssp EEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTTT---CC------C-CCSEEEEESCGGGSCHHHHHHHHHHHHHTCC
T ss_pred EEEecC-HHHhh--cccccccCCCCCeEEEecCCCC---CC------C-CCcEEEEehhccCCCHHHHHHHHHHHHHhcC
Confidence 577888 44444 4444445667789999999863 11 4 89999985432 122578999999999
Q ss_pred CCeEEEEecccc
Q 032390 77 VGGIAVYDNTLW 88 (142)
Q Consensus 77 ~gG~iv~dn~~~ 88 (142)
|||.+++.+...
T Consensus 278 pgG~l~i~e~~~ 289 (348)
T 3lst_A 278 AHGRVLVIDAVV 289 (348)
T ss_dssp TTCEEEEEECCB
T ss_pred CCCEEEEEEecc
Confidence 999998765544
No 266
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=97.27 E-value=0.00038 Score=48.19 Aligned_cols=67 Identities=18% Similarity=0.225 Sum_probs=46.1
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHH-----------------------HHHhhcccCCCceeEEEE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVL-----------------------DQLLKYSENEGSFDYAFV 57 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l-----------------------~~~~~~~~~~~~fD~Ifi 57 (142)
+|+++|+++.. .. ++++++++|+.+.. ..+ ++++||+|++
T Consensus 50 ~v~gvD~s~~~-----------~~-~~v~~~~~d~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-----~~~~fD~v~~ 112 (201)
T 2plw_A 50 KIIGIDKKIMD-----------PI-PNVYFIQGEIGKDNMNNIKNINYIDNMNNNSVDYKLKEIL-----QDKKIDIILS 112 (201)
T ss_dssp EEEEEESSCCC-----------CC-TTCEEEECCTTTTSSCCC-----------CHHHHHHHHHH-----TTCCEEEEEE
T ss_pred eEEEEeCCccC-----------CC-CCceEEEccccchhhhhhccccccccccchhhHHHHHhhc-----CCCcccEEEe
Confidence 37999999842 22 46899999986531 012 2468999999
Q ss_pred cCCCcC-------c-------HHHHHHHHhcccCCeEEEEe
Q 032390 58 DADKDN-------Y-------CNYHERLMKLLKVGGIAVYD 84 (142)
Q Consensus 58 D~~~~~-------~-------~~~~~~~~~~L~~gG~iv~d 84 (142)
|+.... . ...++.+.+.|+|||.+++.
T Consensus 113 ~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 153 (201)
T 2plw_A 113 DAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVK 153 (201)
T ss_dssp CCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEE
Confidence 874321 1 12567788999999999884
No 267
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=97.20 E-value=0.0024 Score=47.31 Aligned_cols=75 Identities=11% Similarity=0.001 Sum_probs=55.3
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC-----cHHHHHHHHhcc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN-----YCNYHERLMKLL 75 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~-----~~~~~~~~~~~L 75 (142)
+++++|+|+.+++.+++|+..+|+. .++.+.|...-. +.++||++++--.-+. -...| .+.+.|
T Consensus 158 ~y~a~DId~~~le~a~~~l~~~g~~--~~~~v~D~~~~~--------p~~~~DvaL~lkti~~Le~q~kg~g~-~ll~aL 226 (281)
T 3lcv_B 158 VYIASDIDARLVGFVDEALTRLNVP--HRTNVADLLEDR--------LDEPADVTLLLKTLPCLETQQRGSGW-EVIDIV 226 (281)
T ss_dssp EEEEEESBHHHHHHHHHHHHHTTCC--EEEEECCTTTSC--------CCSCCSEEEETTCHHHHHHHSTTHHH-HHHHHS
T ss_pred EEEEEeCCHHHHHHHHHHHHhcCCC--ceEEEeeecccC--------CCCCcchHHHHHHHHHhhhhhhHHHH-HHHHHh
Confidence 4789999999999999999999875 788888876431 3678999987432111 11234 677889
Q ss_pred cCCeEEEEecc
Q 032390 76 KVGGIAVYDNT 86 (142)
Q Consensus 76 ~~gG~iv~dn~ 86 (142)
+++|++|.-..
T Consensus 227 ~~~~vvVSfp~ 237 (281)
T 3lcv_B 227 NSPNIVVTFPT 237 (281)
T ss_dssp SCSEEEEEEEC
T ss_pred CCCCEEEeccc
Confidence 99999987544
No 268
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=97.14 E-value=2.8e-05 Score=56.18 Aligned_cols=72 Identities=13% Similarity=0.182 Sum_probs=46.9
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEc-cHHHHH-HHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIES-EALSVL-DQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVG 78 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~-da~~~l-~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~g 78 (142)
+|+++|+++++++.|+++.. ++..... ++.... ..+ ....||.+.+|........+++.+.+.|+||
T Consensus 62 ~V~gvDis~~ml~~a~~~~~------~~~~~~~~~~~~~~~~~~-----~~~~~d~~~~D~v~~~l~~~l~~i~rvLkpg 130 (232)
T 3opn_A 62 LVYALDVGTNQLAWKIRSDE------RVVVMEQFNFRNAVLADF-----EQGRPSFTSIDVSFISLDLILPPLYEILEKN 130 (232)
T ss_dssp EEEEECSSCCCCCHHHHTCT------TEEEECSCCGGGCCGGGC-----CSCCCSEEEECCSSSCGGGTHHHHHHHSCTT
T ss_pred EEEEEcCCHHHHHHHHHhCc------cccccccceEEEeCHhHc-----CcCCCCEEEEEEEhhhHHHHHHHHHHhccCC
Confidence 48999999999999877432 2322211 221110 111 1223677777776555678899999999999
Q ss_pred eEEEE
Q 032390 79 GIAVY 83 (142)
Q Consensus 79 G~iv~ 83 (142)
|.+++
T Consensus 131 G~lv~ 135 (232)
T 3opn_A 131 GEVAA 135 (232)
T ss_dssp CEEEE
T ss_pred CEEEE
Confidence 99887
No 269
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=97.12 E-value=0.00023 Score=49.91 Aligned_cols=63 Identities=19% Similarity=0.237 Sum_probs=47.4
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCC--CcCcHHHHHHHHhcccCC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDAD--KDNYCNYHERLMKLLKVG 78 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~--~~~~~~~~~~~~~~L~~g 78 (142)
+++++|+++. +++++.+|+.+. + + +.++||+|++... ......+++.+.+.|+||
T Consensus 88 ~v~~~D~s~~----------------~~~~~~~d~~~~-~-~-----~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~~g 144 (215)
T 2zfu_A 88 PVHCFDLASL----------------DPRVTVCDMAQV-P-L-----EDESVDVAVFCLSLMGTNIRDFLEEANRVLKPG 144 (215)
T ss_dssp CEEEEESSCS----------------STTEEESCTTSC-S-C-----CTTCEEEEEEESCCCSSCHHHHHHHHHHHEEEE
T ss_pred cEEEEeCCCC----------------CceEEEeccccC-C-C-----CCCCEeEEEEehhccccCHHHHHHHHHHhCCCC
Confidence 4788999887 467888888762 1 1 2468999998653 234678899999999999
Q ss_pred eEEEEecc
Q 032390 79 GIAVYDNT 86 (142)
Q Consensus 79 G~iv~dn~ 86 (142)
|.+++...
T Consensus 145 G~l~i~~~ 152 (215)
T 2zfu_A 145 GLLKVAEV 152 (215)
T ss_dssp EEEEEEEC
T ss_pred eEEEEEEc
Confidence 99988643
No 270
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=97.10 E-value=0.00027 Score=58.33 Aligned_cols=56 Identities=13% Similarity=0.111 Sum_probs=43.3
Q ss_pred cEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCc------HHHHHHHHhcccCCeEEEEe
Q 032390 27 KINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNY------CNYHERLMKLLKVGGIAVYD 84 (142)
Q Consensus 27 ~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~------~~~~~~~~~~L~~gG~iv~d 84 (142)
.++++.||+.+.++++... ....+|.+|+|+..+.. .++|..+.+++++||.+...
T Consensus 149 ~l~l~~gd~~~~l~~~~~~--~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~ 210 (689)
T 3pvc_A 149 TLDLWFGDVNTLLPTLDDS--LNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFSTF 210 (689)
T ss_dssp EEEEEESCHHHHGGGCCGG--GTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEES
T ss_pred EEEEEccCHHHHHhhcccc--cCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEec
Confidence 6889999999998875210 13689999999965544 78899999999999998753
No 271
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=96.98 E-value=0.0013 Score=53.22 Aligned_cols=52 Identities=23% Similarity=0.272 Sum_probs=43.8
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVD 58 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD 58 (142)
+|++||.++.+++.|+.+....|.. +|++.++++.++.... .+++||+|++=
T Consensus 90 ~V~giD~~~~~i~~a~~~a~~~~~~-~~~~~~~~~~~~~~~~-----~~~~fD~v~~~ 141 (569)
T 4azs_A 90 TIVGIDFQQENINVCRALAEENPDF-AAEFRVGRIEEVIAAL-----EEGEFDLAIGL 141 (569)
T ss_dssp EEEEEESCHHHHHHHHHHHHTSTTS-EEEEEECCHHHHHHHC-----CTTSCSEEEEE
T ss_pred EEEEECCCHHHHHHHHHHHHhcCCC-ceEEEECCHHHHhhhc-----cCCCccEEEEC
Confidence 4899999999999999999887753 6999999999876553 25689999974
No 272
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=96.94 E-value=0.00096 Score=45.84 Aligned_cols=70 Identities=11% Similarity=0.144 Sum_probs=45.7
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEE-EccHHHHHH--HHhhcccCCCceeEEEEcCCCcC-------c-------
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFI-ESEALSVLD--QLLKYSENEGSFDYAFVDADKDN-------Y------- 64 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~-~~da~~~l~--~~~~~~~~~~~fD~IfiD~~~~~-------~------- 64 (142)
|+++|+++.. +. ++++++ .+|+.+... .+... .++++||+|++|..... .
T Consensus 58 v~~vD~s~~~-----------~~-~~~~~~~~~d~~~~~~~~~~~~~-~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~ 124 (196)
T 2nyu_A 58 VLGVDLLHIF-----------PL-EGATFLCPADVTDPRTSQRILEV-LPGRRADVILSDMAPNATGFRDLDHDRLISLC 124 (196)
T ss_dssp EEEECSSCCC-----------CC-TTCEEECSCCTTSHHHHHHHHHH-SGGGCEEEEEECCCCCCCSCHHHHHHHHHHHH
T ss_pred EEEEechhcc-----------cC-CCCeEEEeccCCCHHHHHHHHHh-cCCCCCcEEEeCCCCCCCCCcccCHHHHHHHH
Confidence 7899999842 22 468899 888654311 00000 01357999999863211 1
Q ss_pred HHHHHHHHhcccCCeEEEEe
Q 032390 65 CNYHERLMKLLKVGGIAVYD 84 (142)
Q Consensus 65 ~~~~~~~~~~L~~gG~iv~d 84 (142)
...++.+.+.|+|||.+++.
T Consensus 125 ~~~l~~~~~~LkpgG~lv~~ 144 (196)
T 2nyu_A 125 LTLLSVTPDILQPGGTFLCK 144 (196)
T ss_dssp HHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHhcCCCEEEEE
Confidence 36688888999999999885
No 273
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=96.91 E-value=0.0023 Score=47.81 Aligned_cols=52 Identities=17% Similarity=0.240 Sum_probs=41.7
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD 62 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~ 62 (142)
+|+++|+|+.+++.++++++.. ++++++++|+.++ .+ +..+||.|+.+.+..
T Consensus 74 ~V~aVEid~~li~~a~~~~~~~---~~v~vi~gD~l~~--~~-----~~~~fD~Iv~NlPy~ 125 (295)
T 3gru_A 74 KVYVIEIDKSLEPYANKLKELY---NNIEIIWGDALKV--DL-----NKLDFNKVVANLPYQ 125 (295)
T ss_dssp EEEEEESCGGGHHHHHHHHHHC---SSEEEEESCTTTS--CG-----GGSCCSEEEEECCGG
T ss_pred EEEEEECCHHHHHHHHHHhccC---CCeEEEECchhhC--Cc-----ccCCccEEEEeCccc
Confidence 4899999999999999999732 5799999999874 12 134699999987743
No 274
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=96.85 E-value=7.4e-05 Score=55.43 Aligned_cols=74 Identities=5% Similarity=-0.052 Sum_probs=47.6
Q ss_pred CEEEEeCChhHHHHHHHHH-HHcCCCCcEEEE--EccHHHHHHHHhhcccCCCceeEEEEcCCC--cCc-------HHHH
Q 032390 1 MITAIDVNRETYEIGLPII-KKAGVDHKINFI--ESEALSVLDQLLKYSENEGSFDYAFVDADK--DNY-------CNYH 68 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~-~~~~~~~~v~~~--~~da~~~l~~~~~~~~~~~~fD~IfiD~~~--~~~-------~~~~ 68 (142)
+|++||+++ +...+++.. .......+++++ ++|+.++ ++++||+|++|... ..+ ...+
T Consensus 105 ~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l---------~~~~fD~Vvsd~~~~~~~~~~d~~~~l~~L 174 (276)
T 2wa2_A 105 NVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKM---------EPFQADTVLCDIGESNPTAAVEASRTLTVL 174 (276)
T ss_dssp TEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGC---------CCCCCSEEEECCCCCCSCHHHHHHHHHHHH
T ss_pred CEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhC---------CCCCcCEEEECCCcCCCchhhhHHHHHHHH
Confidence 589999998 533332210 001111268999 8998763 25689999999651 111 1357
Q ss_pred HHHHhcccCCe--EEEEe
Q 032390 69 ERLMKLLKVGG--IAVYD 84 (142)
Q Consensus 69 ~~~~~~L~~gG--~iv~d 84 (142)
+.+.+.|+||| .+++.
T Consensus 175 ~~~~r~LkpGG~~~~v~~ 192 (276)
T 2wa2_A 175 NVISRWLEYNQGCGFCVK 192 (276)
T ss_dssp HHHHHHHHHSTTCEEEEE
T ss_pred HHHHHHhccCCCcEEEEE
Confidence 77889999999 88874
No 275
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=96.80 E-value=0.0016 Score=49.00 Aligned_cols=52 Identities=15% Similarity=0.120 Sum_probs=41.7
Q ss_pred cEEEEEccHHHHHHHHhhcccCCCceeEEEEcCC--CcCc----HHHHHHHHhcccCCeEEEE
Q 032390 27 KINFIESEALSVLDQLLKYSENEGSFDYAFVDAD--KDNY----CNYHERLMKLLKVGGIAVY 83 (142)
Q Consensus 27 ~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~--~~~~----~~~~~~~~~~L~~gG~iv~ 83 (142)
..++..||+.+.++.+. ..+||+||+|+- ..+. +++|+.+.++++|||+++.
T Consensus 167 ~L~l~~GDa~~~l~~l~-----~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~laT 224 (308)
T 3vyw_A 167 SLKVLLGDARKRIKEVE-----NFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWVS 224 (308)
T ss_dssp EEEEEESCHHHHGGGCC-----SCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEEE
T ss_pred EEEEEechHHHHHhhhc-----ccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEEE
Confidence 35788999999988762 357999999983 3332 5789999999999999975
No 276
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=96.71 E-value=0.0019 Score=54.52 Aligned_cols=77 Identities=10% Similarity=-0.004 Sum_probs=51.8
Q ss_pred CEEEEeCChhHHHHH--HHHHHHcCCC---CcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC------------
Q 032390 1 MITAIDVNRETYEIG--LPIIKKAGVD---HKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN------------ 63 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a--~~~~~~~~~~---~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~------------ 63 (142)
+++++|+++.+++.| +.|+...++. +...+..+|....- .. ..++||+|+.+||...
T Consensus 350 ~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~-~~-----~~~kFDVVIgNPPYg~~~~~~~e~kd~~ 423 (878)
T 3s1s_A 350 QIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLN-PE-----DFANVSVVVMNPPYVSGVTDPAIKRKFA 423 (878)
T ss_dssp GEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCC-GG-----GGTTEEEEEECCBCCSSCCCHHHHHHHH
T ss_pred eEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhccc-cc-----ccCCCCEEEECCCccccccchhhhhhHH
Confidence 378999999999999 6666542222 12456666665421 11 1468999999997511
Q ss_pred --------------------cHHHHHHHHhcccCCeEEEE
Q 032390 64 --------------------YCNYHERLMKLLKVGGIAVY 83 (142)
Q Consensus 64 --------------------~~~~~~~~~~~L~~gG~iv~ 83 (142)
|..+++.+..+|++||.+++
T Consensus 424 ~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAf 463 (878)
T 3s1s_A 424 HKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISA 463 (878)
T ss_dssp HHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEE
T ss_pred HHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEE
Confidence 23467778899999998754
No 277
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=96.54 E-value=0.00036 Score=52.37 Aligned_cols=72 Identities=8% Similarity=-0.006 Sum_probs=46.3
Q ss_pred CEEEEeC----ChhHHHHHHHHHHHcCCCCcEEEEEc-cHHHHHHHHhhcccCCCceeEEEEcCCCc--Cc----H---H
Q 032390 1 MITAIDV----NRETYEIGLPIIKKAGVDHKINFIES-EALSVLDQLLKYSENEGSFDYAFVDADKD--NY----C---N 66 (142)
Q Consensus 1 ~v~~ve~----~~~~~~~a~~~~~~~~~~~~v~~~~~-da~~~l~~~~~~~~~~~~fD~IfiD~~~~--~~----~---~ 66 (142)
+|+++|+ ++.+++.++ .+..+ .++++++.+ |+.++ +.++||+|++|.... .+ . .
T Consensus 105 ~V~gvD~~~~~~~~~~~~~~--~~~~~-~~~v~~~~~~D~~~l---------~~~~fD~V~sd~~~~~g~~~~d~~~~l~ 172 (305)
T 2p41_A 105 NVREVKGLTKGGPGHEEPIP--MSTYG-WNLVRLQSGVDVFFI---------PPERCDTLLCDIGESSPNPTVEAGRTLR 172 (305)
T ss_dssp TEEEEEEECCCSTTSCCCCC--CCSTT-GGGEEEECSCCTTTS---------CCCCCSEEEECCCCCCSSHHHHHHHHHH
T ss_pred CEEEEeccccCchhHHHHHH--hhhcC-CCCeEEEeccccccC---------CcCCCCEEEECCccccCcchhhHHHHHH
Confidence 4889998 454332111 11112 157999999 87653 246899999997532 11 1 3
Q ss_pred HHHHHHhcccCCeEEEEe
Q 032390 67 YHERLMKLLKVGGIAVYD 84 (142)
Q Consensus 67 ~~~~~~~~L~~gG~iv~d 84 (142)
.++.+.+.|+|||.+++.
T Consensus 173 ~L~~~~~~LkpGG~~v~k 190 (305)
T 2p41_A 173 VLNLVENWLSNNTQFCVK 190 (305)
T ss_dssp HHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHhCCCCEEEEE
Confidence 566777899999999884
No 278
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=96.51 E-value=0.0037 Score=45.70 Aligned_cols=74 Identities=14% Similarity=0.086 Sum_probs=53.6
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc-----CcHHHHHHHHhcc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD-----NYCNYHERLMKLL 75 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~-----~~~~~~~~~~~~L 75 (142)
+++++|+|+.+++.+++++...|. ..++.++|..... ..++||+|++--.-+ .-...+ .+...|
T Consensus 128 ~y~a~DId~~~i~~ar~~~~~~g~--~~~~~v~D~~~~~--------~~~~~DvvLllk~lh~LE~q~~~~~~-~ll~aL 196 (253)
T 3frh_A 128 SVWGCDIHQGLGDVITPFAREKDW--DFTFALQDVLCAP--------PAEAGDLALIFKLLPLLEREQAGSAM-ALLQSL 196 (253)
T ss_dssp EEEEEESBHHHHHHHHHHHHHTTC--EEEEEECCTTTSC--------CCCBCSEEEEESCHHHHHHHSTTHHH-HHHHHC
T ss_pred eEEEEeCCHHHHHHHHHHHHhcCC--CceEEEeecccCC--------CCCCcchHHHHHHHHHhhhhchhhHH-HHHHHh
Confidence 378999999999999999998873 6899999986532 257899997631100 011223 566789
Q ss_pred cCCeEEEEec
Q 032390 76 KVGGIAVYDN 85 (142)
Q Consensus 76 ~~gG~iv~dn 85 (142)
+++|++|.-.
T Consensus 197 ~~~~vvVsfP 206 (253)
T 3frh_A 197 NTPRMAVSFP 206 (253)
T ss_dssp BCSEEEEEEE
T ss_pred cCCCEEEEcC
Confidence 9999988744
No 279
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=96.50 E-value=0.00093 Score=51.06 Aligned_cols=69 Identities=13% Similarity=0.141 Sum_probs=50.6
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc-----CcHHHHHHHHhccc
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD-----NYCNYHERLMKLLK 76 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~-----~~~~~~~~~~~~L~ 76 (142)
++++|+ +.+++.|++ . ++++++.+|+.+. + +. ||+|++-.... ....+++.+.+.|+
T Consensus 236 ~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~~---~------~~-~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~ 297 (372)
T 1fp1_D 236 GINFDL-PQVIENAPP------L-SGIEHVGGDMFAS---V------PQ-GDAMILKAVCHNWSDEKCIEFLSNCHKALS 297 (372)
T ss_dssp EEEEEC-HHHHTTCCC------C-TTEEEEECCTTTC---C------CC-EEEEEEESSGGGSCHHHHHHHHHHHHHHEE
T ss_pred EEEeCh-HHHHHhhhh------c-CCCEEEeCCcccC---C------CC-CCEEEEecccccCCHHHHHHHHHHHHHhcC
Confidence 577899 888887765 1 4699999998751 2 33 99999854322 12378899999999
Q ss_pred CCeEEEEecccc
Q 032390 77 VGGIAVYDNTLW 88 (142)
Q Consensus 77 ~gG~iv~dn~~~ 88 (142)
|||.+++.+...
T Consensus 298 pgG~l~i~e~~~ 309 (372)
T 1fp1_D 298 PNGKVIIVEFIL 309 (372)
T ss_dssp EEEEEEEEEEEE
T ss_pred CCCEEEEEEecc
Confidence 999988765544
No 280
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=96.50 E-value=0.0038 Score=46.44 Aligned_cols=55 Identities=9% Similarity=0.093 Sum_probs=41.9
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD 62 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~ 62 (142)
+|+++|.||++++.|++ ++. +++++++++..++-..+.+. ..+++|.|++|....
T Consensus 46 ~VigiD~Dp~Ai~~A~~-L~~----~rv~lv~~~f~~l~~~L~~~--g~~~vDgIL~DLGvS 100 (285)
T 1wg8_A 46 RVIGLDQDPEAVARAKG-LHL----PGLTVVQGNFRHLKRHLAAL--GVERVDGILADLGVS 100 (285)
T ss_dssp EEEEEESCHHHHHHHHH-TCC----TTEEEEESCGGGHHHHHHHT--TCSCEEEEEEECSCC
T ss_pred EEEEEeCCHHHHHHHHh-hcc----CCEEEEECCcchHHHHHHHc--CCCCcCEEEeCCccc
Confidence 48999999999999998 643 58999999998763333210 125799999998644
No 281
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=96.45 E-value=0.00073 Score=51.72 Aligned_cols=69 Identities=7% Similarity=0.044 Sum_probs=50.0
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc-----CcHHHHHHHHhccc
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD-----NYCNYHERLMKLLK 76 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~-----~~~~~~~~~~~~L~ 76 (142)
++.+|+ |++++.|++ .++++++.+|+.+. + +.. |+|++-.... ....+++.+.+.|+
T Consensus 230 ~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~~---~------p~~-D~v~~~~vlh~~~~~~~~~~l~~~~~~L~ 291 (368)
T 3reo_A 230 AINFDL-PHVIQDAPA-------FSGVEHLGGDMFDG---V------PKG-DAIFIKWICHDWSDEHCLKLLKNCYAALP 291 (368)
T ss_dssp EEEEEC-HHHHTTCCC-------CTTEEEEECCTTTC---C------CCC-SEEEEESCGGGBCHHHHHHHHHHHHHHSC
T ss_pred EEEEeh-HHHHHhhhh-------cCCCEEEecCCCCC---C------CCC-CEEEEechhhcCCHHHHHHHHHHHHHHcC
Confidence 688898 888877764 25899999998752 2 223 9999854322 23467899999999
Q ss_pred CCeEEEEecccc
Q 032390 77 VGGIAVYDNTLW 88 (142)
Q Consensus 77 ~gG~iv~dn~~~ 88 (142)
|||.+++.+...
T Consensus 292 pgG~l~i~e~~~ 303 (368)
T 3reo_A 292 DHGKVIVAEYIL 303 (368)
T ss_dssp TTCEEEEEECCC
T ss_pred CCCEEEEEEecc
Confidence 999887765544
No 282
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=96.38 E-value=0.0015 Score=49.90 Aligned_cols=69 Identities=7% Similarity=0.035 Sum_probs=50.2
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC-----cCcHHHHHHHHhccc
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK-----DNYCNYHERLMKLLK 76 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~-----~~~~~~~~~~~~~L~ 76 (142)
++.+|+ |++++.|++ .++++++.+|+.+- + +.. |+|++-... ......++.+.+.|+
T Consensus 228 ~~~~D~-~~~~~~a~~-------~~~v~~~~~D~~~~---~------p~~-D~v~~~~vlh~~~d~~~~~~L~~~~~~L~ 289 (364)
T 3p9c_A 228 GVNFDL-PHVISEAPQ-------FPGVTHVGGDMFKE---V------PSG-DTILMKWILHDWSDQHCATLLKNCYDALP 289 (364)
T ss_dssp EEEEEC-HHHHTTCCC-------CTTEEEEECCTTTC---C------CCC-SEEEEESCGGGSCHHHHHHHHHHHHHHSC
T ss_pred EEEecC-HHHHHhhhh-------cCCeEEEeCCcCCC---C------CCC-CEEEehHHhccCCHHHHHHHHHHHHHHcC
Confidence 678898 888877764 25899999998762 2 223 999985432 223567899999999
Q ss_pred CCeEEEEecccc
Q 032390 77 VGGIAVYDNTLW 88 (142)
Q Consensus 77 ~gG~iv~dn~~~ 88 (142)
|||.+++.+...
T Consensus 290 pgG~l~i~e~~~ 301 (364)
T 3p9c_A 290 AHGKVVLVQCIL 301 (364)
T ss_dssp TTCEEEEEECCB
T ss_pred CCCEEEEEEecc
Confidence 999987765544
No 283
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=96.35 E-value=0.00014 Score=53.53 Aligned_cols=74 Identities=11% Similarity=-0.022 Sum_probs=47.0
Q ss_pred CEEEEeCChhHHHHHHHHH-HHcCCCCcEEEE--EccHHHHHHHHhhcccCCCceeEEEEcCCC--cCc----H---HHH
Q 032390 1 MITAIDVNRETYEIGLPII-KKAGVDHKINFI--ESEALSVLDQLLKYSENEGSFDYAFVDADK--DNY----C---NYH 68 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~-~~~~~~~~v~~~--~~da~~~l~~~~~~~~~~~~fD~IfiD~~~--~~~----~---~~~ 68 (142)
+|++||+++ +...+++.- .......+++++ ++|+.++ ++++||+|++|... ..+ . ..+
T Consensus 97 ~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l---------~~~~fD~V~sd~~~~~~~~~~d~~~~l~~L 166 (265)
T 2oxt_A 97 HVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTL---------PVERTDVIMCDVGESSPKWSVESERTIKIL 166 (265)
T ss_dssp TEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTS---------CCCCCSEEEECCCCCCSCHHHHHHHHHHHH
T ss_pred cEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHC---------CCCCCcEEEEeCcccCCccchhHHHHHHHH
Confidence 589999998 433222110 000111268999 8998763 25689999999651 111 1 257
Q ss_pred HHHHhcccCCe--EEEEe
Q 032390 69 ERLMKLLKVGG--IAVYD 84 (142)
Q Consensus 69 ~~~~~~L~~gG--~iv~d 84 (142)
+.+.+.|+||| .+++.
T Consensus 167 ~~~~r~LkpGG~~~fv~k 184 (265)
T 2oxt_A 167 ELLEKWKVKNPSADFVVK 184 (265)
T ss_dssp HHHHHHHHHCTTCEEEEE
T ss_pred HHHHHHhccCCCeEEEEE
Confidence 77889999999 88874
No 284
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=96.32 E-value=0.0051 Score=44.91 Aligned_cols=53 Identities=8% Similarity=0.196 Sum_probs=40.3
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHH-HHHHhhcccCCCceeEEEEcCCC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV-LDQLLKYSENEGSFDYAFVDADK 61 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~-l~~~~~~~~~~~~fD~IfiD~~~ 61 (142)
+|+++|+|+++++.+++++.. .++++++++|+.++ ++.+. .+++|| |+.+.+.
T Consensus 53 ~V~avEid~~~~~~~~~~~~~---~~~v~~i~~D~~~~~~~~~~----~~~~~~-vv~NlPY 106 (255)
T 3tqs_A 53 NLALVEIDRDLVAFLQKKYNQ---QKNITIYQNDALQFDFSSVK----TDKPLR-VVGNLPY 106 (255)
T ss_dssp EEEEEECCHHHHHHHHHHHTT---CTTEEEEESCTTTCCGGGSC----CSSCEE-EEEECCH
T ss_pred EEEEEECCHHHHHHHHHHHhh---CCCcEEEEcchHhCCHHHhc----cCCCeE-EEecCCc
Confidence 489999999999999999865 35899999999875 22221 135688 7777764
No 285
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=96.14 E-value=0.0021 Score=48.61 Aligned_cols=70 Identities=6% Similarity=0.046 Sum_probs=51.1
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc-----CcHHHHHHHHhcc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD-----NYCNYHERLMKLL 75 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~-----~~~~~~~~~~~~L 75 (142)
+++++|+ +.+++.|++ . ++++++.+|+.+. + + .||+|++-.... ....+++.+.+.|
T Consensus 214 ~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~~---~------p-~~D~v~~~~~lh~~~d~~~~~~l~~~~~~L 275 (352)
T 1fp2_A 214 KCIVFDR-PQVVENLSG------S-NNLTYVGGDMFTS---I------P-NADAVLLKYILHNWTDKDCLRILKKCKEAV 275 (352)
T ss_dssp EEEEEEC-HHHHTTCCC------B-TTEEEEECCTTTC---C------C-CCSEEEEESCGGGSCHHHHHHHHHHHHHHH
T ss_pred eEEEeeC-HHHHhhccc------C-CCcEEEeccccCC---C------C-CccEEEeehhhccCCHHHHHHHHHHHHHhC
Confidence 3789999 999988875 1 3599999998651 2 2 499999854321 2237889999999
Q ss_pred cC---CeEEEEecccc
Q 032390 76 KV---GGIAVYDNTLW 88 (142)
Q Consensus 76 ~~---gG~iv~dn~~~ 88 (142)
+| ||.+++.+...
T Consensus 276 ~p~~~gG~l~i~e~~~ 291 (352)
T 1fp2_A 276 TNDGKRGKVTIIDMVI 291 (352)
T ss_dssp SGGGCCCEEEEEECEE
T ss_pred CCCCCCcEEEEEEeec
Confidence 99 99887755443
No 286
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=96.01 E-value=0.017 Score=46.44 Aligned_cols=85 Identities=15% Similarity=0.128 Sum_probs=57.7
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC-----------------
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN----------------- 63 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~----------------- 63 (142)
.++++|+++.++..|+-|+-..|.. ...+.++|.+..-..- .....+||+|+.+||...
T Consensus 256 ~i~G~E~~~~~~~la~mNl~lhg~~-~~~I~~~dtL~~~~~~---~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~ 331 (530)
T 3ufb_A 256 SIFGGEAKSLPYLLVQMNLLLHGLE-YPRIDPENSLRFPLRE---MGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTA 331 (530)
T ss_dssp CEEEECCSHHHHHHHHHHHHHHTCS-CCEEECSCTTCSCGGG---CCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCC
T ss_pred hhhhhhccHHHHHHHHHHHHhcCCc-cccccccccccCchhh---hcccccceEEEecCCCCccccccccccCchhcccc
Confidence 3789999999999999999888875 4678888876421000 011357999999997421
Q ss_pred --cHHHHHHHHhccc-------CCeEEE---Eeccccc
Q 032390 64 --YCNYHERLMKLLK-------VGGIAV---YDNTLWG 89 (142)
Q Consensus 64 --~~~~~~~~~~~L~-------~gG~iv---~dn~~~~ 89 (142)
...+++.+...|+ +||.+. .+.+++.
T Consensus 332 ~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP~g~Lf~ 369 (530)
T 3ufb_A 332 ETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVPNGTLFS 369 (530)
T ss_dssp BHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEEHHHHHC
T ss_pred hhHHHHHHHHHHHhhhhhhccCCCceEEEEecchhhhc
Confidence 2345677777775 687643 3456653
No 287
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=95.96 E-value=0.013 Score=43.22 Aligned_cols=62 Identities=11% Similarity=0.011 Sum_probs=45.2
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHH
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLM 72 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~ 72 (142)
+|+++|+|+.+++.+++++. ..+++++++|+.++- +. ....+|.|+.+.+..--...+..++
T Consensus 70 ~V~avEid~~~~~~l~~~~~----~~~v~vi~~D~l~~~--~~----~~~~~~~iv~NlPy~iss~il~~ll 131 (271)
T 3fut_A 70 EVTAIEKDLRLRPVLEETLS----GLPVRLVFQDALLYP--WE----EVPQGSLLVANLPYHIATPLVTRLL 131 (271)
T ss_dssp CEEEEESCGGGHHHHHHHTT----TSSEEEEESCGGGSC--GG----GSCTTEEEEEEECSSCCHHHHHHHH
T ss_pred EEEEEECCHHHHHHHHHhcC----CCCEEEEECChhhCC--hh----hccCccEEEecCcccccHHHHHHHh
Confidence 58999999999999999875 257999999998751 11 0136899999887544444444444
No 288
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=95.77 E-value=0.013 Score=42.22 Aligned_cols=51 Identities=12% Similarity=0.225 Sum_probs=37.7
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK 61 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~ 61 (142)
+|+++|+|+.+++.|++++... ++++++++|+.++- +. ....| .|+.+.+.
T Consensus 54 ~v~~vD~~~~~~~~a~~~~~~~---~~v~~~~~D~~~~~--~~----~~~~~-~vv~nlPy 104 (244)
T 1qam_A 54 FVTAIEIDHKLCKTTENKLVDH---DNFQVLNKDILQFK--FP----KNQSY-KIFGNIPY 104 (244)
T ss_dssp EEEEECSCHHHHHHHHHHTTTC---CSEEEECCCGGGCC--CC----SSCCC-EEEEECCG
T ss_pred eEEEEECCHHHHHHHHHhhccC---CCeEEEEChHHhCC--cc----cCCCe-EEEEeCCc
Confidence 4899999999999999988542 58999999998741 10 02345 57777764
No 289
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=95.47 E-value=0.062 Score=44.11 Aligned_cols=56 Identities=18% Similarity=0.149 Sum_probs=42.3
Q ss_pred cEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc--C----cHHHHHHHHhcccCCeEEEEe
Q 032390 27 KINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD--N----YCNYHERLMKLLKVGGIAVYD 84 (142)
Q Consensus 27 ~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~--~----~~~~~~~~~~~L~~gG~iv~d 84 (142)
.+++..||+.+.++++... ....||.+|+|+..+ + -.++|..+.++++|||.+...
T Consensus 157 ~l~l~~gd~~~~l~~~~~~--~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~ 218 (676)
T 3ps9_A 157 TLDLWFGDINELTSQLDDS--LNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATF 218 (676)
T ss_dssp EEEEEESCHHHHGGGBCGG--GTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEES
T ss_pred EEEEecCCHHHHHHhcccc--cCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEec
Confidence 4678999999998876210 135799999998532 1 367889999999999998764
No 290
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=95.18 E-value=0.0097 Score=45.05 Aligned_cols=69 Identities=10% Similarity=0.053 Sum_probs=49.3
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc-----CcHHHHHHHHhccc
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD-----NYCNYHERLMKLLK 76 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~-----~~~~~~~~~~~~L~ 76 (142)
++++|+ +.+++.|++ . ++++++.+|+.+ .+ + .||+|++-.... ....+++.+.+.|+
T Consensus 220 ~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~---~~------~-~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~ 281 (358)
T 1zg3_A 220 CTVFDQ-PQVVGNLTG------N-ENLNFVGGDMFK---SI------P-SADAVLLKWVLHDWNDEQSLKILKNSKEAIS 281 (358)
T ss_dssp EEEEEC-HHHHSSCCC------C-SSEEEEECCTTT---CC------C-CCSEEEEESCGGGSCHHHHHHHHHHHHHHTG
T ss_pred EEEecc-HHHHhhccc------C-CCcEEEeCccCC---CC------C-CceEEEEcccccCCCHHHHHHHHHHHHHhCC
Confidence 678898 788877764 2 359999999875 12 3 599999854321 13378899999999
Q ss_pred C---CeEEEEecccc
Q 032390 77 V---GGIAVYDNTLW 88 (142)
Q Consensus 77 ~---gG~iv~dn~~~ 88 (142)
| ||.+++.+...
T Consensus 282 p~~~gG~l~i~e~~~ 296 (358)
T 1zg3_A 282 HKGKDGKVIIIDISI 296 (358)
T ss_dssp GGGGGCEEEEEECEE
T ss_pred CCCCCcEEEEEEecc
Confidence 9 99877654443
No 291
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=94.66 E-value=0.0017 Score=46.80 Aligned_cols=73 Identities=11% Similarity=0.195 Sum_probs=50.4
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcH--------------H
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYC--------------N 66 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~--------------~ 66 (142)
+|+++|+|+++++.|++++. ..++++++++|+.++- +. .+++| .|+.+++..... .
T Consensus 53 ~v~~id~~~~~~~~a~~~~~---~~~~v~~~~~D~~~~~--~~----~~~~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~ 122 (245)
T 1yub_A 53 QVTSIELDSHLFNLSSEKLK---LNTRVTLIHQDILQFQ--FP----NKQRY-KIVGNIPYHLSTQIIKKVVFESRASDI 122 (245)
T ss_dssp EEEESSSSCSSSSSSSCTTT---TCSEEEECCSCCTTTT--CC----CSSEE-EEEEECCSSSCHHHHHHHHHHCCCEEE
T ss_pred eEEEEECCHHHHHHHHHHhc---cCCceEEEECChhhcC--cc----cCCCc-EEEEeCCccccHHHHHHHHhCCCCCeE
Confidence 48999999999999998775 2368999999998741 10 12578 778887642211 1
Q ss_pred HH----HHHHhcccCCeEEEE
Q 032390 67 YH----ERLMKLLKVGGIAVY 83 (142)
Q Consensus 67 ~~----~~~~~~L~~gG~iv~ 83 (142)
++ +.+.++|+|||.+.+
T Consensus 123 ~lm~q~e~a~rll~~~G~l~v 143 (245)
T 1yub_A 123 YLIVEEGFYKRTLDIHRTLGL 143 (245)
T ss_dssp EEEEESSHHHHHHCGGGSHHH
T ss_pred EEEeeHHHHHHHhCCCCchhh
Confidence 12 456678888887643
No 292
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=94.54 E-value=0.068 Score=38.80 Aligned_cols=62 Identities=13% Similarity=0.103 Sum_probs=42.5
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHH-HHHHhhcccCCCceeEEEEcCCCcCcHHHH
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV-LDQLLKYSENEGSFDYAFVDADKDNYCNYH 68 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~-l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~ 68 (142)
+|+++|+|+.+++.+++++... ++++++++|+.++ ++.+.. ..+..|.|+...+..-....+
T Consensus 45 ~v~avEid~~~~~~a~~~~~~~---~~v~~i~~D~~~~~~~~~~~---~~~~~~~vvsNlPY~i~~~il 107 (252)
T 1qyr_A 45 QLTVIELDRDLAARLQTHPFLG---PKLTIYQQDAMTFNFGELAE---KMGQPLRVFGNLPYNISTPLM 107 (252)
T ss_dssp CEEEECCCHHHHHHHHTCTTTG---GGEEEECSCGGGCCHHHHHH---HHTSCEEEEEECCTTTHHHHH
T ss_pred eEEEEECCHHHHHHHHHHhccC---CceEEEECchhhCCHHHhhc---ccCCceEEEECCCCCccHHHH
Confidence 3899999999999999877542 4799999999874 333210 012457888888754333333
No 293
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=94.50 E-value=0.23 Score=31.26 Aligned_cols=67 Identities=12% Similarity=-0.054 Sum_probs=47.4
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc---CcHHHHHHHHhc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD---NYCNYHERLMKL 74 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~---~~~~~~~~~~~~ 74 (142)
+|..+|-++...+..+..++..|+ .+.....+..+.+..+. ..++|+|++|...+ .-.++++.+...
T Consensus 11 ~iLivdd~~~~~~~l~~~L~~~g~--~v~~~~~~~~~a~~~~~-----~~~~dlii~d~~~~~~~~g~~~~~~l~~~ 80 (140)
T 3cg0_A 11 GVLIVEDGRLAAATLRIQLESLGY--DVLGVFDNGEEAVRCAP-----DLRPDIALVDIMLCGALDGVETAARLAAG 80 (140)
T ss_dssp EEEEECCBHHHHHHHHHHHHHHTC--EEEEEESSHHHHHHHHH-----HHCCSEEEEESSCCSSSCHHHHHHHHHHH
T ss_pred eEEEEECCHHHHHHHHHHHHHCCC--eeEEEECCHHHHHHHHH-----hCCCCEEEEecCCCCCCCHHHHHHHHHhC
Confidence 367889999999999999998775 34444667777766653 34699999996542 334566666555
No 294
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=94.27 E-value=0.064 Score=38.81 Aligned_cols=72 Identities=15% Similarity=0.108 Sum_probs=47.2
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHH-HHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhc--ccC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV-LDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKL--LKV 77 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~-l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~--L~~ 77 (142)
+|+++|+|+.+++.++++ + ..+++++++|+.++ ++.+ .+.| .|+.+.+...-...+..+++. .-+
T Consensus 56 ~v~avEid~~~~~~~~~~----~-~~~v~~i~~D~~~~~~~~~------~~~~-~vv~NlPy~i~~~il~~ll~~~~~~~ 123 (249)
T 3ftd_A 56 KLYVIELDREMVENLKSI----G-DERLEVINEDASKFPFCSL------GKEL-KVVGNLPYNVASLIIENTVYNKDCVP 123 (249)
T ss_dssp EEEEECCCHHHHHHHTTS----C-CTTEEEECSCTTTCCGGGS------CSSE-EEEEECCTTTHHHHHHHHHHTGGGCS
T ss_pred eEEEEECCHHHHHHHHhc----c-CCCeEEEEcchhhCChhHc------cCCc-EEEEECchhccHHHHHHHHhcCCCCc
Confidence 489999999999999987 2 35799999999875 2211 1234 788888765444444444432 234
Q ss_pred CeEEEEe
Q 032390 78 GGIAVYD 84 (142)
Q Consensus 78 gG~iv~d 84 (142)
.+++++.
T Consensus 124 ~~~~m~Q 130 (249)
T 3ftd_A 124 LAVFMVQ 130 (249)
T ss_dssp EEEEEEE
T ss_pred eEEEEEe
Confidence 5555553
No 295
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=94.21 E-value=0.52 Score=29.55 Aligned_cols=75 Identities=13% Similarity=0.108 Sum_probs=49.6
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc-------CcHHHHHHHHh
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD-------NYCNYHERLMK 73 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~-------~~~~~~~~~~~ 73 (142)
+|..+|-++...+..+..++..|+ .+. ...+..+.+..+. ...+|+|++|...+ .-.++++.+.+
T Consensus 5 ~ilivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~l~-----~~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~ 76 (140)
T 2qr3_A 5 TIIIVDDNKGVLTAVQLLLKNHFS--KVI-TLSSPVSLSTVLR-----EENPEVVLLDMNFTSGINNGNEGLFWLHEIKR 76 (140)
T ss_dssp EEEEECSCHHHHHHHHHHHTTTSS--EEE-EECCHHHHHHHHH-----HSCEEEEEEETTTTC-----CCHHHHHHHHHH
T ss_pred eEEEEeCCHHHHHHHHHHHHhCCc--EEE-EeCCHHHHHHHHH-----cCCCCEEEEeCCcCCCCCCCccHHHHHHHHHh
Confidence 367899999999999999987765 344 4566667666654 35799999997543 23455666655
Q ss_pred cccCCeEEEE
Q 032390 74 LLKVGGIAVY 83 (142)
Q Consensus 74 ~L~~gG~iv~ 83 (142)
....-.+|++
T Consensus 77 ~~~~~~ii~l 86 (140)
T 2qr3_A 77 QYRDLPVVLF 86 (140)
T ss_dssp HCTTCCEEEE
T ss_pred hCcCCCEEEE
Confidence 4333334443
No 296
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=93.99 E-value=0.57 Score=29.52 Aligned_cols=65 Identities=9% Similarity=-0.030 Sum_probs=47.1
Q ss_pred CEEEEeCChhHHHHHHHHHHH-cCCCCcEEEEEccHHHHHHHHhhcccCC-CceeEEEEcCCCc-C--cHHHHHHHHh
Q 032390 1 MITAIDVNRETYEIGLPIIKK-AGVDHKINFIESEALSVLDQLLKYSENE-GSFDYAFVDADKD-N--YCNYHERLMK 73 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~-~~~~~~v~~~~~da~~~l~~~~~~~~~~-~~fD~IfiD~~~~-~--~~~~~~~~~~ 73 (142)
+|..+|-++......+..++. .|+ .+. ...++.+.+..+. . ..+|+|++|...+ . -.++++.+.+
T Consensus 6 ~ilivdd~~~~~~~l~~~L~~~~~~--~v~-~~~~~~~a~~~l~-----~~~~~dlvi~D~~l~~~~~g~~~~~~l~~ 75 (140)
T 3lua_A 6 TVLLIDYFEYEREKTKIIFDNIGEY--DFI-EVENLKKFYSIFK-----DLDSITLIIMDIAFPVEKEGLEVLSAIRN 75 (140)
T ss_dssp EEEEECSCHHHHHHHHHHHHHHCCC--EEE-EECSHHHHHTTTT-----TCCCCSEEEECSCSSSHHHHHHHHHHHHH
T ss_pred eEEEEeCCHHHHHHHHHHHHhccCc--cEE-EECCHHHHHHHHh-----cCCCCcEEEEeCCCCCCCcHHHHHHHHHh
Confidence 367899999999999999998 765 354 5667777766553 4 6899999998755 2 2345555554
No 297
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=93.89 E-value=0.65 Score=30.09 Aligned_cols=69 Identities=10% Similarity=0.020 Sum_probs=47.7
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHhc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMKL 74 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~~ 74 (142)
+|..+|-++...+..+..++..|+ .+.....++.+.+..+... ...+|+|++|...+. -.++++.+.+.
T Consensus 38 ~Ilivdd~~~~~~~l~~~L~~~g~--~v~~~~~~~~~al~~l~~~---~~~~dliilD~~l~~~~g~~~~~~lr~~ 108 (157)
T 3hzh_A 38 NVLIVDDSVFTVKQLTQIFTSEGF--NIIDTAADGEEAVIKYKNH---YPNIDIVTLXITMPKMDGITCLSNIMEF 108 (157)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHH---GGGCCEEEECSSCSSSCHHHHHHHHHHH
T ss_pred EEEEEeCCHHHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHHhc---CCCCCEEEEeccCCCccHHHHHHHHHhh
Confidence 367899999999999999988875 3433667777777666420 127999999975432 34556665543
No 298
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=93.84 E-value=0.23 Score=32.39 Aligned_cols=65 Identities=17% Similarity=0.251 Sum_probs=47.3
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCc--HHHHHHHH
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNY--CNYHERLM 72 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~--~~~~~~~~ 72 (142)
+|.-||=++...+..+..++..|+. +...-.++.+.+..+. ..+||+|++|-..+.. .++++.+.
T Consensus 14 rILiVDD~~~~r~~l~~~L~~~G~~--~v~~a~~g~~al~~~~-----~~~~DlillD~~MP~mdG~el~~~ir 80 (134)
T 3to5_A 14 KILIVDDFSTMRRIVKNLLRDLGFN--NTQEADDGLTALPMLK-----KGDFDFVVTDWNMPGMQGIDLLKNIR 80 (134)
T ss_dssp CEEEECSCHHHHHHHHHHHHHTTCC--CEEEESSHHHHHHHHH-----HHCCSEEEEESCCSSSCHHHHHHHHH
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCc--EEEEECCHHHHHHHHH-----hCCCCEEEEcCCCCCCCHHHHHHHHH
Confidence 4778999999999999999999874 2234467777766654 3579999999865543 34555554
No 299
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=93.84 E-value=0.56 Score=28.65 Aligned_cols=75 Identities=15% Similarity=0.129 Sum_probs=50.3
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc---CcHHHHHHHHhc--c
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD---NYCNYHERLMKL--L 75 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~---~~~~~~~~~~~~--L 75 (142)
+|..+|-++...+..+..++..|+ ++. ...+..+.+..+. ..++|+|++|...+ .-.++++.+.+. .
T Consensus 7 ~ilivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~~~-----~~~~dlvi~d~~~~~~~~g~~~~~~l~~~~~~ 78 (127)
T 2gkg_A 7 KILIVESDTALSATLRSALEGRGF--TVD-ETTDGKGSVEQIR-----RDRPDLVVLAVDLSAGQNGYLICGKLKKDDDL 78 (127)
T ss_dssp EEEEECSCHHHHHHHHHHHHHHTC--EEE-EECCHHHHHHHHH-----HHCCSEEEEESBCGGGCBHHHHHHHHHHSTTT
T ss_pred eEEEEeCCHHHHHHHHHHHHhcCc--eEE-EecCHHHHHHHHH-----hcCCCEEEEeCCCCCCCCHHHHHHHHhcCccc
Confidence 367889999999999999998876 354 5566666666553 34699999997544 334556666554 2
Q ss_pred cCCeEEEE
Q 032390 76 KVGGIAVY 83 (142)
Q Consensus 76 ~~gG~iv~ 83 (142)
..-.++++
T Consensus 79 ~~~~ii~~ 86 (127)
T 2gkg_A 79 KNVPIVII 86 (127)
T ss_dssp TTSCEEEE
T ss_pred cCCCEEEE
Confidence 33334444
No 300
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=93.80 E-value=0.19 Score=37.02 Aligned_cols=32 Identities=13% Similarity=0.222 Sum_probs=28.7
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHH
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV 38 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~ 38 (142)
|+++|+|+.+++.++++. .++++++++|+.++
T Consensus 71 V~avDid~~~l~~a~~~~-----~~~v~~i~~D~~~~ 102 (279)
T 3uzu_A 71 LHAVELDRDLIGRLEQRF-----GELLELHAGDALTF 102 (279)
T ss_dssp EEEEECCHHHHHHHHHHH-----GGGEEEEESCGGGC
T ss_pred EEEEECCHHHHHHHHHhc-----CCCcEEEECChhcC
Confidence 999999999999999983 35899999999875
No 301
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=93.75 E-value=0.69 Score=28.52 Aligned_cols=66 Identities=12% Similarity=0.149 Sum_probs=47.1
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc--CcHHHHHHHHhc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD--NYCNYHERLMKL 74 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~--~~~~~~~~~~~~ 74 (142)
+|..+|-++...+..++.++..|. .+. ...++.+.+..+. ..++|+|++|...+ .-.++++.+.+.
T Consensus 5 ~ilivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~l~-----~~~~dlii~D~~l~~~~g~~~~~~l~~~ 72 (127)
T 3i42_A 5 QALIVEDYQAAAETFKELLEMLGF--QAD-YVMSGTDALHAMS-----TRGYDAVFIDLNLPDTSGLALVKQLRAL 72 (127)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTE--EEE-EESSHHHHHHHHH-----HSCCSEEEEESBCSSSBHHHHHHHHHHS
T ss_pred eEEEEcCCHHHHHHHHHHHHHcCC--CEE-EECCHHHHHHHHH-----hcCCCEEEEeCCCCCCCHHHHHHHHHhh
Confidence 367899999999999999999875 343 3456777766664 35799999997543 234566666554
No 302
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=93.72 E-value=0.75 Score=28.87 Aligned_cols=65 Identities=15% Similarity=0.148 Sum_probs=46.9
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc--CcHHHHHHHHh
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD--NYCNYHERLMK 73 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~--~~~~~~~~~~~ 73 (142)
+|..+|-++...+..+..++..|+. + ....++.+.+..+. ..++|+|++|...+ +-.++++.+.+
T Consensus 8 ~iLivdd~~~~~~~l~~~l~~~g~~--v-~~~~~~~~a~~~l~-----~~~~dlvi~d~~l~~~~g~~~~~~l~~ 74 (140)
T 3grc_A 8 RILICEDDPDIARLLNLMLEKGGFD--S-DMVHSAAQALEQVA-----RRPYAAMTVDLNLPDQDGVSLIRALRR 74 (140)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCE--E-EEECSHHHHHHHHH-----HSCCSEEEECSCCSSSCHHHHHHHHHT
T ss_pred CEEEEcCCHHHHHHHHHHHHHCCCe--E-EEECCHHHHHHHHH-----hCCCCEEEEeCCCCCCCHHHHHHHHHh
Confidence 3678999999999999999988763 4 34567777776664 35799999997543 23455666655
No 303
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=93.67 E-value=0.47 Score=29.57 Aligned_cols=74 Identities=19% Similarity=0.098 Sum_probs=48.9
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHhcccCC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMKLLKVG 78 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~~L~~g 78 (142)
+|..+|-++...+..+..++..|. .+.....++.+.+..+. ..++|+|++|...+. -.++++.+.+. .|+
T Consensus 3 ~ilivdd~~~~~~~l~~~L~~~g~--~v~~~~~~~~~a~~~~~-----~~~~dlii~d~~l~~~~g~~~~~~l~~~-~~~ 74 (134)
T 3f6c_A 3 NAIIIDDHPLAIAAIRNLLIKNDI--EILAELTEGGSAVQRVE-----TLKPDIVIIDVDIPGVNGIQVLETLRKR-QYS 74 (134)
T ss_dssp EEEEECCCHHHHHHHHHHHHHTTE--EEEEEESSSTTHHHHHH-----HHCCSEEEEETTCSSSCHHHHHHHHHHT-TCC
T ss_pred EEEEEcCCHHHHHHHHHHHhhCCc--EEEEEcCCHHHHHHHHH-----hcCCCEEEEecCCCCCChHHHHHHHHhc-CCC
Confidence 467899999999999999998863 34334556656555553 347999999975432 34556666543 344
Q ss_pred eEEE
Q 032390 79 GIAV 82 (142)
Q Consensus 79 G~iv 82 (142)
..++
T Consensus 75 ~~ii 78 (134)
T 3f6c_A 75 GIII 78 (134)
T ss_dssp SEEE
T ss_pred CeEE
Confidence 4443
No 304
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=93.63 E-value=0.81 Score=28.93 Aligned_cols=67 Identities=9% Similarity=0.095 Sum_probs=48.0
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHh
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMK 73 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~ 73 (142)
+|..+|-++...+..+..++..|... .-....+..+.+..+. ..++|+|++|...+. -.++++.+.+
T Consensus 7 ~ILivdd~~~~~~~l~~~L~~~~~~~-~v~~~~~~~~a~~~l~-----~~~~dlii~D~~l~~~~g~~~~~~lr~ 75 (144)
T 3kht_A 7 RVLVVEDNPDDIALIRRVLDRKDIHC-QLEFVDNGAKALYQVQ-----QAKYDLIILDIGLPIANGFEVMSAVRK 75 (144)
T ss_dssp EEEEECCCHHHHHHHHHHHHHTTCCE-EEEEESSHHHHHHHHT-----TCCCSEEEECTTCGGGCHHHHHHHHHS
T ss_pred EEEEEeCCHHHHHHHHHHHHhcCCCe-eEEEECCHHHHHHHhh-----cCCCCEEEEeCCCCCCCHHHHHHHHHh
Confidence 36789999999999999999987642 2344566777776663 567999999986443 3455665554
No 305
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=93.60 E-value=0.87 Score=29.20 Aligned_cols=66 Identities=18% Similarity=0.176 Sum_probs=47.0
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHhc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMKL 74 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~~ 74 (142)
+|..+|-++...+..+..++..|+ .+. ...+..+.+..+. ..++|+|++|...+. -.++++.+.+.
T Consensus 9 ~iLivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~l~-----~~~~dlvi~d~~l~~~~g~~~~~~l~~~ 76 (154)
T 2rjn_A 9 TVMLVDDEQPILNSLKRLIKRLGC--NII-TFTSPLDALEALK-----GTSVQLVISDMRMPEMGGEVFLEQVAKS 76 (154)
T ss_dssp EEEEECSCHHHHHHHHHHHHTTTC--EEE-EESCHHHHHHHHT-----TSCCSEEEEESSCSSSCHHHHHHHHHHH
T ss_pred eEEEEcCCHHHHHHHHHHHHHcCC--eEE-EeCCHHHHHHHHh-----cCCCCEEEEecCCCCCCHHHHHHHHHHh
Confidence 367899999999999999988765 344 5667777776663 457999999975432 34555555543
No 306
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=93.58 E-value=1 Score=30.05 Aligned_cols=73 Identities=12% Similarity=0.020 Sum_probs=50.7
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc--CcHHHHHHHHhcccCC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD--NYCNYHERLMKLLKVG 78 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~--~~~~~~~~~~~~L~~g 78 (142)
+|..||-++...+..+..++..|+ .+ ....++.+.+..+. ..++|+|++|...+ +-.++++.+.+. .|+
T Consensus 9 ~iLivdd~~~~~~~l~~~L~~~g~--~v-~~~~~~~~al~~~~-----~~~~dlvl~D~~lp~~~g~~~~~~l~~~-~~~ 79 (184)
T 3rqi_A 9 NFLVIDDNEVFAGTLARGLERRGY--AV-RQAHNKDEALKLAG-----AEKFEFITVXLHLGNDSGLSLIAPLCDL-QPD 79 (184)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTC--EE-EEECSHHHHHHHHT-----TSCCSEEEECSEETTEESHHHHHHHHHH-CTT
T ss_pred eEEEEcCCHHHHHHHHHHHHHCCC--EE-EEeCCHHHHHHHHh-----hCCCCEEEEeccCCCccHHHHHHHHHhc-CCC
Confidence 367899999999999999998875 35 45667777777663 56799999997433 234566666553 344
Q ss_pred eEEE
Q 032390 79 GIAV 82 (142)
Q Consensus 79 G~iv 82 (142)
..++
T Consensus 80 ~~ii 83 (184)
T 3rqi_A 80 ARIL 83 (184)
T ss_dssp CEEE
T ss_pred CCEE
Confidence 4333
No 307
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=93.50 E-value=0.069 Score=40.71 Aligned_cols=55 Identities=16% Similarity=0.200 Sum_probs=40.1
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK 61 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~ 61 (142)
+|+++|+|+++++.|+ .+ ..+++++++++..++...+.+. +-.+++|.|++|-..
T Consensus 84 rVig~D~Dp~Al~~A~-rL----~~~Rv~lv~~nF~~l~~~L~~~-g~~~~vDgILfDLGV 138 (347)
T 3tka_A 84 RLLAIDRDPQAIAVAK-TI----DDPRFSIIHGPFSALGEYVAER-DLIGKIDGILLDLGV 138 (347)
T ss_dssp EEEEEESCHHHHHHHT-TC----CCTTEEEEESCGGGHHHHHHHT-TCTTCEEEEEEECSC
T ss_pred EEEEEECCHHHHHHHH-hh----cCCcEEEEeCCHHHHHHHHHhc-CCCCcccEEEECCcc
Confidence 4899999999999995 33 2479999999988765544321 111369999998753
No 308
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=93.36 E-value=0.78 Score=29.35 Aligned_cols=75 Identities=9% Similarity=-0.017 Sum_probs=50.2
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc--CcHHHHHHHHhcccCC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD--NYCNYHERLMKLLKVG 78 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~--~~~~~~~~~~~~L~~g 78 (142)
+|..+|-++...+..+..++..|.. .+-....+..+.+..+. ..++|+|++|...+ .-.++++.+.+. .|.
T Consensus 17 ~iLivdd~~~~~~~l~~~L~~~~~~-~~v~~~~~~~~a~~~l~-----~~~~dlii~d~~l~~~~g~~~~~~l~~~-~~~ 89 (152)
T 3eul_A 17 RVVVGDDHPLFREGVVRALSLSGSV-NVVGEADDGAAALELIK-----AHLPDVALLDYRMPGMDGAQVAAAVRSY-ELP 89 (152)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHSSE-EEEEEESSHHHHHHHHH-----HHCCSEEEEETTCSSSCHHHHHHHHHHT-TCS
T ss_pred EEEEEcCCHHHHHHHHHHHhhCCCe-EEEEEeCCHHHHHHHHH-----hcCCCEEEEeCCCCCCCHHHHHHHHHhc-CCC
Confidence 4778999999999999999888642 23335667777766654 34799999997543 234556666544 344
Q ss_pred eEEE
Q 032390 79 GIAV 82 (142)
Q Consensus 79 G~iv 82 (142)
..++
T Consensus 90 ~~ii 93 (152)
T 3eul_A 90 TRVL 93 (152)
T ss_dssp CEEE
T ss_pred CeEE
Confidence 4443
No 309
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=93.36 E-value=0.77 Score=29.47 Aligned_cols=73 Identities=11% Similarity=0.066 Sum_probs=49.7
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHhcccCC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMKLLKVG 78 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~~L~~g 78 (142)
+|..+|-++......+..++..|+ .+. ...+..+.+..+. ..++|+|++|...+. -.++++.+.+. .++
T Consensus 16 ~ILivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~l~-----~~~~dlvi~D~~l~~~~g~~~~~~l~~~-~~~ 86 (153)
T 3hv2_A 16 EILLVDSQEVILQRLQQLLSPLPY--TLH-FARDATQALQLLA-----SREVDLVISAAHLPQMDGPTLLARIHQQ-YPS 86 (153)
T ss_dssp EEEEECSCHHHHHHHHHHHTTSSC--EEE-EESSHHHHHHHHH-----HSCCSEEEEESCCSSSCHHHHHHHHHHH-CTT
T ss_pred eEEEECCCHHHHHHHHHHhcccCc--EEE-EECCHHHHHHHHH-----cCCCCEEEEeCCCCcCcHHHHHHHHHhH-CCC
Confidence 367899999999999999988764 344 5567777776664 357999999975432 34556666553 344
Q ss_pred eEEE
Q 032390 79 GIAV 82 (142)
Q Consensus 79 G~iv 82 (142)
..++
T Consensus 87 ~~ii 90 (153)
T 3hv2_A 87 TTRI 90 (153)
T ss_dssp SEEE
T ss_pred CeEE
Confidence 4333
No 310
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=93.17 E-value=0.9 Score=28.09 Aligned_cols=66 Identities=12% Similarity=0.058 Sum_probs=46.4
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc--CcHHHHHHHHhc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD--NYCNYHERLMKL 74 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~--~~~~~~~~~~~~ 74 (142)
+|..+|-++...+..++.++..|. .+. ...++.+.+..+. ..++|+|++|...+ .-.++++.+.+.
T Consensus 9 ~ilivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~l~-----~~~~dlvi~d~~l~~~~g~~~~~~l~~~ 76 (130)
T 3eod_A 9 QILIVEDEQVFRSLLDSWFSSLGA--TTV-LAADGVDALELLG-----GFTPDLMICDIAMPRMNGLKLLEHIRNR 76 (130)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTC--EEE-EESCHHHHHHHHT-----TCCCSEEEECCC-----CHHHHHHHHHT
T ss_pred eEEEEeCCHHHHHHHHHHHHhCCc--eEE-EeCCHHHHHHHHh-----cCCCCEEEEecCCCCCCHHHHHHHHHhc
Confidence 367899999999999999999875 243 3667777777663 56799999997533 234556665543
No 311
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=93.15 E-value=0.98 Score=28.47 Aligned_cols=67 Identities=10% Similarity=0.096 Sum_probs=47.7
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc---CcHHHHHHHHhc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD---NYCNYHERLMKL 74 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~---~~~~~~~~~~~~ 74 (142)
+|..+|-++...+..+..++..|+ .+. ...+..+.+..+.. ...+|+|++|...+ .-.++++.+.+.
T Consensus 7 ~ilivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~l~~----~~~~dlvi~D~~l~~~~~g~~~~~~l~~~ 76 (140)
T 3h5i_A 7 KILIVEDSKFQAKTIANILNKYGY--TVE-IALTGEAAVEKVSG----GWYPDLILMDIELGEGMDGVQTALAIQQI 76 (140)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTC--EEE-EESSHHHHHHHHHT----TCCCSEEEEESSCSSSCCHHHHHHHHHHH
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCC--EEE-EecChHHHHHHHhc----CCCCCEEEEeccCCCCCCHHHHHHHHHhC
Confidence 367899999999999999998875 344 45677777766641 25799999997542 345566666553
No 312
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=93.14 E-value=0.91 Score=28.08 Aligned_cols=75 Identities=9% Similarity=-0.045 Sum_probs=50.4
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHhccc-C
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMKLLK-V 77 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~~L~-~ 77 (142)
+|..+|-++...+..+..++..|. .+. ...++.+.+..+. ..++|+|++|...+. -.++++.+.+.-. +
T Consensus 8 ~ilivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~l~-----~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~ 79 (132)
T 3lte_A 8 RILVVDDDQAMAAAIERVLKRDHW--QVE-IAHNGFDAGIKLS-----TFEPAIMTLDLSMPKLDGLDVIRSLRQNKVAN 79 (132)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTC--EEE-EESSHHHHHHHHH-----HTCCSEEEEESCBTTBCHHHHHHHHHTTTCSS
T ss_pred cEEEEECCHHHHHHHHHHHHHCCc--EEE-EeCCHHHHHHHHH-----hcCCCEEEEecCCCCCCHHHHHHHHHhcCccC
Confidence 367899999999999999998765 344 5567777766654 457999999976433 3455665554321 3
Q ss_pred CeEEEE
Q 032390 78 GGIAVY 83 (142)
Q Consensus 78 gG~iv~ 83 (142)
.-.|++
T Consensus 80 ~~~ii~ 85 (132)
T 3lte_A 80 QPKILV 85 (132)
T ss_dssp CCEEEE
T ss_pred CCeEEE
Confidence 344443
No 313
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=93.04 E-value=0.79 Score=28.13 Aligned_cols=65 Identities=15% Similarity=0.138 Sum_probs=46.6
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCc--HHHHHHHHh
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNY--CNYHERLMK 73 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~--~~~~~~~~~ 73 (142)
+|..+|-++...+..+..++..|. .+. ...++.+.+..+. ..++|+|++|...+.. .++++.+.+
T Consensus 4 ~ilivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~al~~~~-----~~~~dlii~D~~~p~~~g~~~~~~lr~ 70 (120)
T 3f6p_A 4 KILVVDDEKPIADILEFNLRKEGY--EVH-CAHDGNEAVEMVE-----ELQPDLILLDIMLPNKDGVEVCREVRK 70 (120)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTC--EEE-EESSHHHHHHHHH-----TTCCSEEEEETTSTTTHHHHHHHHHHT
T ss_pred eEEEEECCHHHHHHHHHHHHhCCE--EEE-EeCCHHHHHHHHh-----hCCCCEEEEeCCCCCCCHHHHHHHHHh
Confidence 367889999999999999998875 344 4567777776664 4679999999865543 334555543
No 314
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=92.96 E-value=0.54 Score=29.56 Aligned_cols=66 Identities=17% Similarity=0.156 Sum_probs=45.8
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--c--HHHHHHHHhc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--Y--CNYHERLMKL 74 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~--~~~~~~~~~~ 74 (142)
+|..+|-++...+..+..++..|+ .+. ...++.+.+..+. ..++|+|++|...+. . .++++.+.+.
T Consensus 8 ~ilivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~l~-----~~~~dlvi~D~~l~~~~~~g~~~~~~l~~~ 77 (136)
T 3kto_A 8 IIYLVDHQKDARAALSKLLSPLDV--TIQ-CFASAESFMRQQI-----SDDAIGMIIEAHLEDKKDSGIELLETLVKR 77 (136)
T ss_dssp EEEEECSCHHHHHHHHHHHTTSSS--EEE-EESSHHHHTTSCC-----CTTEEEEEEETTGGGBTTHHHHHHHHHHHT
T ss_pred eEEEEcCCHHHHHHHHHHHHHCCc--EEE-EeCCHHHHHHHHh-----ccCCCEEEEeCcCCCCCccHHHHHHHHHhC
Confidence 367889999999999999988765 344 5567777665542 467999999986544 2 3445555443
No 315
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=92.94 E-value=0.23 Score=33.96 Aligned_cols=72 Identities=14% Similarity=0.022 Sum_probs=43.7
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|++++.+++..+.+++ .|....++....+..+.+.... ....+|+++..+. ...++.+.+.|++||.
T Consensus 65 ~V~~~~~~~~~~~~~~~----~g~~~~~d~~~~~~~~~~~~~~----~~~~~D~vi~~~g----~~~~~~~~~~l~~~G~ 132 (198)
T 1pqw_A 65 RIYTTAGSDAKREMLSR----LGVEYVGDSRSVDFADEILELT----DGYGVDVVLNSLA----GEAIQRGVQILAPGGR 132 (198)
T ss_dssp EEEEEESSHHHHHHHHT----TCCSEEEETTCSTHHHHHHHHT----TTCCEEEEEECCC----THHHHHHHHTEEEEEE
T ss_pred EEEEEeCCHHHHHHHHH----cCCCEEeeCCcHHHHHHHHHHh----CCCCCeEEEECCc----hHHHHHHHHHhccCCE
Confidence 37888999888776653 4543212221223333333321 1346999995443 3567888899999999
Q ss_pred EEEe
Q 032390 81 AVYD 84 (142)
Q Consensus 81 iv~d 84 (142)
++.-
T Consensus 133 ~v~~ 136 (198)
T 1pqw_A 133 FIEL 136 (198)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 8864
No 316
>1dz3_A Stage 0 sporulation protein A; response regulator, domain swapping; 1.65A {Bacillus stearothermophilus} SCOP: c.23.1.1 PDB: 1qmp_A*
Probab=92.90 E-value=0.84 Score=28.28 Aligned_cols=71 Identities=17% Similarity=0.047 Sum_probs=46.3
Q ss_pred EEEEeCChhHHHHHHHHHHHc-CCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHhcccCC
Q 032390 2 ITAIDVNRETYEIGLPIIKKA-GVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMKLLKVG 78 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~-~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~~L~~g 78 (142)
|..+|-++...+..+..++.. |. .+.....++.+.+..+. ..++|+|++|...+. -.++++.+.+...+.
T Consensus 5 ilivdd~~~~~~~l~~~l~~~~~~--~~~~~~~~~~~a~~~~~-----~~~~dlvllD~~l~~~~g~~~~~~l~~~~~~~ 77 (130)
T 1dz3_A 5 VCIADDNRELVSLLDEYISSQPDM--EVIGTAYNGQDCLQMLE-----EKRPDILLLDIIMPHLDGLAVLERIRAGFEHQ 77 (130)
T ss_dssp EEEECSCHHHHHHHHHHHHTSTTE--EEEEEESSHHHHHHHHH-----HHCCSEEEEESCCSSSCHHHHHHHHHHHCSSC
T ss_pred EEEEcCCHHHHHHHHHHHHhCCCc--eEEEEeCCHHHHHHHHh-----cCCCCEEEEecCCCCCCHHHHHHHHHhcCCCC
Confidence 678899999999999988765 32 23234567777766553 346999999975432 345566665533344
Q ss_pred e
Q 032390 79 G 79 (142)
Q Consensus 79 G 79 (142)
.
T Consensus 78 ~ 78 (130)
T 1dz3_A 78 P 78 (130)
T ss_dssp C
T ss_pred C
Confidence 4
No 317
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=92.89 E-value=1.1 Score=28.56 Aligned_cols=67 Identities=13% Similarity=0.035 Sum_probs=45.9
Q ss_pred CEEEEeCChhHHHHHHHHHHH-cCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc--CcHHHHHHHHhc
Q 032390 1 MITAIDVNRETYEIGLPIIKK-AGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD--NYCNYHERLMKL 74 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~-~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~--~~~~~~~~~~~~ 74 (142)
+|..+|-++...+..+..++. .|+ .+.....+..+.+..+. ...+|+|++|...+ .-.++++.+.+.
T Consensus 7 ~ILivdd~~~~~~~l~~~L~~~~~~--~v~~~~~~~~~a~~~l~-----~~~~dlii~D~~l~~~~g~~~~~~l~~~ 76 (153)
T 3cz5_A 7 RIMLVDDHPIVREGYRRLIERRPGY--AVVAEAADAGEAYRLYR-----ETTPDIVVMDLTLPGPGGIEATRHIRQW 76 (153)
T ss_dssp EEEEECSCHHHHHHHHHHHTTSTTE--EEEEEESSHHHHHHHHH-----TTCCSEEEECSCCSSSCHHHHHHHHHHH
T ss_pred EEEEECCcHHHHHHHHHHHhhCCCc--EEEEEeCCHHHHHHHHh-----cCCCCEEEEecCCCCCCHHHHHHHHHHh
Confidence 367889999999999998876 443 23335677777776664 45799999997543 234556666554
No 318
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=92.84 E-value=0.2 Score=37.44 Aligned_cols=71 Identities=14% Similarity=0.249 Sum_probs=46.9
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|++++.+++..+.+++ +|...-++....+..+.+... .+.+|.||.... -...++.+.+.|+++|.
T Consensus 192 ~Vi~~~~~~~~~~~~~~----lGa~~~i~~~~~~~~~~~~~~------~g~~d~vid~~g---~~~~~~~~~~~l~~~G~ 258 (340)
T 3s2e_A 192 RVAAVDIDDAKLNLARR----LGAEVAVNARDTDPAAWLQKE------IGGAHGVLVTAV---SPKAFSQAIGMVRRGGT 258 (340)
T ss_dssp EEEEEESCHHHHHHHHH----TTCSEEEETTTSCHHHHHHHH------HSSEEEEEESSC---CHHHHHHHHHHEEEEEE
T ss_pred eEEEEeCCHHHHHHHHH----cCCCEEEeCCCcCHHHHHHHh------CCCCCEEEEeCC---CHHHHHHHHHHhccCCE
Confidence 47899999998887764 564322222223444444332 237999986543 35678889999999999
Q ss_pred EEEe
Q 032390 81 AVYD 84 (142)
Q Consensus 81 iv~d 84 (142)
++.-
T Consensus 259 iv~~ 262 (340)
T 3s2e_A 259 IALN 262 (340)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9864
No 319
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=92.80 E-value=0.7 Score=29.31 Aligned_cols=65 Identities=12% Similarity=0.157 Sum_probs=46.2
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHh
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMK 73 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~ 73 (142)
+|..+|-++...+..+..++..|+ .+. ...++.+.+..+. ...+|+|++|...+. -.++++.+.+
T Consensus 10 ~iLivd~~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~l~-----~~~~dlii~d~~l~~~~g~~~~~~l~~ 76 (147)
T 2zay_A 10 RIMLVDTQLPALAASISALSQEGF--DII-QCGNAIEAVPVAV-----KTHPHLIITEANMPKISGMDLFNSLKK 76 (147)
T ss_dssp EEEEECTTGGGGHHHHHHHHHHTE--EEE-EESSHHHHHHHHH-----HHCCSEEEEESCCSSSCHHHHHHHHHT
T ss_pred eEEEEeCCHHHHHHHHHHHHHcCC--eEE-EeCCHHHHHHHHH-----cCCCCEEEEcCCCCCCCHHHHHHHHHc
Confidence 367899999999999999988775 354 5566677666553 347999999975432 3455666655
No 320
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=92.76 E-value=1.1 Score=28.09 Aligned_cols=72 Identities=8% Similarity=-0.029 Sum_probs=46.4
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHh
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMK 73 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~ 73 (142)
+|..+|-++......+..++..|... .-....++.+.+..+........++|+|++|...+. -.++++.+.+
T Consensus 11 ~iLivdd~~~~~~~l~~~l~~~~~~~-~v~~~~~~~~a~~~l~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~ 84 (146)
T 3ilh_A 11 SVLLIDDDDIVNFLNTTIIRMTHRVE-EIQSVTSGNAAINKLNELYAAGRWPSIICIDINMPGINGWELIDLFKQ 84 (146)
T ss_dssp EEEEECSCHHHHHHHHHHHHTTCCEE-EEEEESSHHHHHHHHHHHHTSSCCCSEEEEESSCSSSCHHHHHHHHHH
T ss_pred eEEEEeCCHHHHHHHHHHHHhcCCCe-eeeecCCHHHHHHHHHHhhccCCCCCEEEEcCCCCCCCHHHHHHHHHH
Confidence 36789999999999999998877531 223445666666655310000167999999975433 3455666655
No 321
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=92.69 E-value=0.6 Score=28.84 Aligned_cols=65 Identities=15% Similarity=0.052 Sum_probs=46.7
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHh
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMK 73 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~ 73 (142)
+|..+|-++......+..++..|+ .+. ...++.+.+..+. ..++|+|++|...+. -.++++.+.+
T Consensus 4 ~ILivdd~~~~~~~l~~~l~~~g~--~v~-~~~~~~~al~~l~-----~~~~dlvllD~~~p~~~g~~~~~~l~~ 70 (122)
T 3gl9_A 4 KVLLVDDSAVLRKIVSFNLKKEGY--EVI-EAENGQIALEKLS-----EFTPDLIVLXIMMPVMDGFTVLKKLQE 70 (122)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTC--EEE-EESSHHHHHHHHT-----TBCCSEEEECSCCSSSCHHHHHHHHHT
T ss_pred eEEEEeCCHHHHHHHHHHHHHCCc--EEE-EeCCHHHHHHHHH-----hcCCCEEEEeccCCCCcHHHHHHHHHh
Confidence 367889999999999999998875 344 5677877777663 467999999976443 2445555543
No 322
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=92.50 E-value=0.22 Score=38.22 Aligned_cols=78 Identities=9% Similarity=0.115 Sum_probs=50.0
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHH-HhhcccCCCceeEEEEcCCCcC----------------c
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQ-LLKYSENEGSFDYAFVDADKDN----------------Y 64 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~-~~~~~~~~~~fD~IfiD~~~~~----------------~ 64 (142)
|.++|+++.+++..+.|+. ...++.+|+.++... +.........+|+|+.++++.. +
T Consensus 27 v~avE~d~~a~~t~~~N~~------~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ggpPCQ~fS~ag~~~~~d~r~~L~ 100 (376)
T 3g7u_A 27 KMAVEIDQHAINTHAINFP------RSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGGPPCQGFSSIGKGNPDDSRNQLY 100 (376)
T ss_dssp EEEECSCHHHHHHHHHHCT------TSEEECCCGGGCCHHHHHHHHCSCCCCCEEEECCCCCTTC-------CHHHHHHH
T ss_pred EEEEeCCHHHHHHHHHhCC------CCceEecChhhcCHHHHHhhcccCCCeeEEEecCCCCCcccccCCCCCCchHHHH
Confidence 5799999999999998762 457788888764221 1000001357999999998432 2
Q ss_pred HHHHHHHHhcccCCeEEEEeccc
Q 032390 65 CNYHERLMKLLKVGGIAVYDNTL 87 (142)
Q Consensus 65 ~~~~~~~~~~L~~gG~iv~dn~~ 87 (142)
..+++ +...++|. .++++|+-
T Consensus 101 ~~~~~-~v~~~~P~-~~v~ENV~ 121 (376)
T 3g7u_A 101 MHFYR-LVSELQPL-FFLAENVP 121 (376)
T ss_dssp HHHHH-HHHHHCCS-EEEEEECT
T ss_pred HHHHH-HHHHhCCC-EEEEecch
Confidence 22333 33556786 67888874
No 323
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=92.41 E-value=1.3 Score=28.17 Aligned_cols=75 Identities=11% Similarity=0.006 Sum_probs=49.5
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHhcccCC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMKLLKVG 78 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~~L~~g 78 (142)
+|..+|-++...+..+..++..+.. ..-....+..+.+..+. ...+|+|++|...+. -.++++.+.+. .++
T Consensus 22 ~iLivdd~~~~~~~l~~~L~~~~~~-~~v~~~~~~~~al~~l~-----~~~~dlii~D~~l~~~~g~~~~~~l~~~-~~~ 94 (150)
T 4e7p_A 22 KVLVAEDQSMLRDAMCQLLTLQPDV-ESVLQAKNGQEAIQLLE-----KESVDIAILDVEMPVKTGLEVLEWIRSE-KLE 94 (150)
T ss_dssp EEEEECSCHHHHHHHHHHHHTSTTE-EEEEEESSHHHHHHHHT-----TSCCSEEEECSSCSSSCHHHHHHHHHHT-TCS
T ss_pred EEEEEcCCHHHHHHHHHHHHhCCCc-EEEEEECCHHHHHHHhh-----ccCCCEEEEeCCCCCCcHHHHHHHHHHh-CCC
Confidence 3678999999999999999876521 22334566777776663 567999999975432 34556666554 344
Q ss_pred eEEE
Q 032390 79 GIAV 82 (142)
Q Consensus 79 G~iv 82 (142)
..++
T Consensus 95 ~~ii 98 (150)
T 4e7p_A 95 TKVV 98 (150)
T ss_dssp CEEE
T ss_pred CeEE
Confidence 4443
No 324
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=92.39 E-value=1.3 Score=27.84 Aligned_cols=65 Identities=18% Similarity=0.227 Sum_probs=45.9
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCc--HHHHHHHHhc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNY--CNYHERLMKL 74 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~--~~~~~~~~~~ 74 (142)
+|..+|-++...+..+..++..|+ .+. ...+..+.+..+. ...+|+|++|. .+.. .++++.+.+.
T Consensus 6 ~iLivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~l~-----~~~~dlvi~d~-~~~~~g~~~~~~l~~~ 72 (142)
T 2qxy_A 6 TVMVVDESRITFLAVKNALEKDGF--NVI-WAKNEQEAFTFLR-----REKIDLVFVDV-FEGEESLNLIRRIREE 72 (142)
T ss_dssp EEEEECSCHHHHHHHHHHHGGGTC--EEE-EESSHHHHHHHHT-----TSCCSEEEEEC-TTTHHHHHHHHHHHHH
T ss_pred eEEEEeCCHHHHHHHHHHHHhCCC--EEE-EECCHHHHHHHHh-----ccCCCEEEEeC-CCCCcHHHHHHHHHHH
Confidence 367899999999999999988776 354 5667777776663 46799999998 5432 2344444443
No 325
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=92.19 E-value=1.5 Score=28.11 Aligned_cols=66 Identities=15% Similarity=0.126 Sum_probs=46.6
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHhc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMKL 74 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~~ 74 (142)
+|..+|-++...+..+..++..|+ .+. ...+..+.+..+. ...+|+|++|...+. -.++++.+.+.
T Consensus 5 ~ILivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~l~-----~~~~dliild~~l~~~~g~~~~~~l~~~ 72 (155)
T 1qkk_A 5 SVFLIDDDRDLRKAMQQTLELAGF--TVS-SFASATEALAGLS-----ADFAGIVISDIRMPGMDGLALFRKILAL 72 (155)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTC--EEE-EESCHHHHHHTCC-----TTCCSEEEEESCCSSSCHHHHHHHHHHH
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCc--EEE-EECCHHHHHHHHH-----hCCCCEEEEeCCCCCCCHHHHHHHHHhh
Confidence 367899999999999999998776 344 5566777766552 467999999975432 34455555544
No 326
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=92.13 E-value=1.4 Score=27.61 Aligned_cols=71 Identities=11% Similarity=0.235 Sum_probs=44.3
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHh
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMK 73 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~ 73 (142)
+|..+|-++...+..+..++..|.. .+ ....++.+.+..+........+||+|++|...+. -.+.++.+.+
T Consensus 4 ~ILivdD~~~~~~~l~~~L~~~g~~-~v-~~~~~~~~al~~~~~~~~~~~~~dlvllD~~mp~~~G~~~~~~lr~ 76 (133)
T 2r25_B 4 KILVVEDNHVNQEVIKRMLNLEGIE-NI-ELACDGQEAFDKVKELTSKGENYNMIFMDVQMPKVDGLLSTKMIRR 76 (133)
T ss_dssp CEEEECSCHHHHHHHHHHHHHTTCC-CE-EEESSHHHHHHHHHHHHHHTCCCSEEEECSCCSSSCHHHHHHHHHH
T ss_pred eEEEEcCCHHHHHHHHHHHHHcCCc-eE-EEECCHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCChHHHHHHHHh
Confidence 4778999999999999999887653 23 3345555555444210000257999999976543 2345555544
No 327
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=92.13 E-value=1.4 Score=27.63 Aligned_cols=74 Identities=16% Similarity=0.111 Sum_probs=49.9
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHhc-ccC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMKL-LKV 77 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~~-L~~ 77 (142)
+|..+|-++...+..+..++..|+ .+. ...++.+.+..+. ...+|+|++|...+. -.++++.+.+. ..+
T Consensus 9 ~iLivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~l~-----~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~ 80 (142)
T 3cg4_A 9 DVMIVDDDAHVRIAVKTILSDAGF--HII-SADSGGQCIDLLK-----KGFSGVVLLDIMMPGMDGWDTIRAILDNSLEQ 80 (142)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTC--EEE-EESSHHHHHHHHH-----TCCCEEEEEESCCSSSCHHHHHHHHHHTTCCT
T ss_pred eEEEEcCCHHHHHHHHHHHHHCCe--EEE-EeCCHHHHHHHHH-----hcCCCEEEEeCCCCCCCHHHHHHHHHhhcccC
Confidence 367899999999999999998875 343 4566667766654 457999999975432 34556666542 234
Q ss_pred CeEEE
Q 032390 78 GGIAV 82 (142)
Q Consensus 78 gG~iv 82 (142)
...++
T Consensus 81 ~~pii 85 (142)
T 3cg4_A 81 GIAIV 85 (142)
T ss_dssp TEEEE
T ss_pred CCCEE
Confidence 44443
No 328
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=92.05 E-value=1.4 Score=27.55 Aligned_cols=65 Identities=6% Similarity=0.114 Sum_probs=45.9
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCC-CceeEEEEcCCCcC--cHHHHHHHHh
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE-GSFDYAFVDADKDN--YCNYHERLMK 73 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~-~~fD~IfiD~~~~~--~~~~~~~~~~ 73 (142)
+|..+|-++...+..+..++..|+ .+. ...++.+.+..+. . ..+|+|++|...+. -.++++.+.+
T Consensus 17 ~ilivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~al~~l~-----~~~~~dlvilD~~l~~~~g~~~~~~l~~ 84 (138)
T 2b4a_A 17 RVTLVEDEPSHATLIQYHLNQLGA--EVT-VHPSGSAFFQHRS-----QLSTCDLLIVSDQLVDLSIFSLLDIVKE 84 (138)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTC--EEE-EESSHHHHHHTGG-----GGGSCSEEEEETTCTTSCHHHHHHHHTT
T ss_pred eEEEECCCHHHHHHHHHHHHHcCC--EEE-EeCCHHHHHHHHH-----hCCCCCEEEEeCCCCCCCHHHHHHHHHh
Confidence 367899999999999999998875 343 4566777766553 4 57999999976443 2445555554
No 329
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=91.98 E-value=1.2 Score=26.77 Aligned_cols=65 Identities=15% Similarity=0.262 Sum_probs=45.4
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHh
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMK 73 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~ 73 (142)
+|..+|-++...+..+..++..|. .+. ...++.+.+..+. ..++|+|++|...+. -.+.++.+.+
T Consensus 3 ~ilivdd~~~~~~~l~~~l~~~~~--~v~-~~~~~~~a~~~~~-----~~~~dlvl~D~~l~~~~g~~~~~~l~~ 69 (116)
T 3a10_A 3 RILVVDDEPNIRELLKEELQEEGY--EID-TAENGEEALKKFF-----SGNYDLVILDIEMPGISGLEVAGEIRK 69 (116)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTC--EEE-EESSHHHHHHHHH-----HSCCSEEEECSCCSSSCHHHHHHHHHH
T ss_pred EEEEEeCCHHHHHHHHHHHHHCCC--EEE-EeCCHHHHHHHHh-----cCCCCEEEEECCCCCCCHHHHHHHHHc
Confidence 367889999999999999988765 344 5566777666553 357999999976443 2344555544
No 330
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=91.93 E-value=0.41 Score=36.13 Aligned_cols=72 Identities=17% Similarity=0.279 Sum_probs=46.2
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeEE
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIA 81 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~i 81 (142)
|++++.+++..+.+++ +|...-+.....+..+.+..+. .+.+|+||--.. ....++.+.+.|+++|.+
T Consensus 218 Vi~~~~~~~~~~~a~~----lGa~~vi~~~~~~~~~~~~~~~-----~gg~D~vid~~g---~~~~~~~~~~~l~~~G~i 285 (371)
T 1f8f_A 218 IIAVDIVESRLELAKQ----LGATHVINSKTQDPVAAIKEIT-----DGGVNFALESTG---SPEILKQGVDALGILGKI 285 (371)
T ss_dssp EEEEESCHHHHHHHHH----HTCSEEEETTTSCHHHHHHHHT-----TSCEEEEEECSC---CHHHHHHHHHTEEEEEEE
T ss_pred EEEECCCHHHHHHHHH----cCCCEEecCCccCHHHHHHHhc-----CCCCcEEEECCC---CHHHHHHHHHHHhcCCEE
Confidence 7899999999888864 3543212222234444444432 337999984332 345688889999999999
Q ss_pred EEec
Q 032390 82 VYDN 85 (142)
Q Consensus 82 v~dn 85 (142)
+.-.
T Consensus 286 v~~G 289 (371)
T 1f8f_A 286 AVVG 289 (371)
T ss_dssp EECC
T ss_pred EEeC
Confidence 8643
No 331
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=91.92 E-value=0.73 Score=34.26 Aligned_cols=73 Identities=21% Similarity=0.184 Sum_probs=51.2
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|++++.+++..+.+++ +|...-+.....|..+.+..+. ....+|.++.+... ...++.+.+.|+++|.
T Consensus 190 ~Vi~~~~~~~r~~~~~~----~Ga~~~i~~~~~~~~~~v~~~t----~g~g~d~~~~~~~~---~~~~~~~~~~l~~~G~ 258 (348)
T 4eez_A 190 KVIAVDINQDKLNLAKK----IGADVTINSGDVNPVDEIKKIT----GGLGVQSAIVCAVA---RIAFEQAVASLKPMGK 258 (348)
T ss_dssp EEEEEESCHHHHHHHHH----TTCSEEEEC-CCCHHHHHHHHT----TSSCEEEEEECCSC---HHHHHHHHHTEEEEEE
T ss_pred EEEEEECcHHHhhhhhh----cCCeEEEeCCCCCHHHHhhhhc----CCCCceEEEEeccC---cchhheeheeecCCce
Confidence 47899999998777664 5654445555566666665553 24568999887653 5567888899999999
Q ss_pred EEEe
Q 032390 81 AVYD 84 (142)
Q Consensus 81 iv~d 84 (142)
++.-
T Consensus 259 ~v~~ 262 (348)
T 4eez_A 259 MVAV 262 (348)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 8764
No 332
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=91.86 E-value=1.5 Score=27.52 Aligned_cols=64 Identities=14% Similarity=0.146 Sum_probs=46.2
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHh
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMK 73 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~ 73 (142)
|..+|-++...+..+..++..|+ .+. ...++.+.+..+. ...+|+|++|...+. -.++++.+.+
T Consensus 7 iLivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~al~~~~-----~~~~dlvl~D~~lp~~~g~~~~~~lr~ 72 (136)
T 3t6k_A 7 LLIVDDDDTVAEMLELVLRGAGY--EVR-RAASGEEALQQIY-----KNLPDALICDVLLPGIDGYTLCKRVRQ 72 (136)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTC--EEE-EESSHHHHHHHHH-----HSCCSEEEEESCCSSSCHHHHHHHHHH
T ss_pred EEEEeCCHHHHHHHHHHHHHCCC--EEE-EeCCHHHHHHHHH-----hCCCCEEEEeCCCCCCCHHHHHHHHHc
Confidence 67889999999999999998875 343 4567777776664 357999999976443 3455665554
No 333
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=91.76 E-value=1.6 Score=27.59 Aligned_cols=75 Identities=11% Similarity=0.063 Sum_probs=47.0
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHhcccCCe
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMKLLKVGG 79 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~~L~~gG 79 (142)
|..+|-++...+..+..+...+..-.+.....++.+.+..+. ..++|+|++|...+. -.++++.+.+. .|+.
T Consensus 5 ILivdd~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~al~~~~-----~~~~dlvllD~~lp~~~g~~l~~~l~~~-~~~~ 78 (141)
T 3cu5_A 5 ILIVDDEKLTRDGLIANINWKALSFDQIDQADDGINAIQIAL-----KHPPNVLLTDVRMPRMDGIELVDNILKL-YPDC 78 (141)
T ss_dssp EEEECSCHHHHHHHHHHCCGGGSCCSEEEEESSHHHHHHHHT-----TSCCSEEEEESCCSSSCHHHHHHHHHHH-CTTC
T ss_pred EEEEeCCHHHHHHHHHHHHHccCCcEEeeecccHHHHHHHHh-----cCCCCEEEEeCCCCCCCHHHHHHHHHhh-CCCC
Confidence 677898888888888777542222234435677777776653 457999999976433 34455555543 3444
Q ss_pred EEE
Q 032390 80 IAV 82 (142)
Q Consensus 80 ~iv 82 (142)
.++
T Consensus 79 ~ii 81 (141)
T 3cu5_A 79 SVI 81 (141)
T ss_dssp EEE
T ss_pred cEE
Confidence 443
No 334
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=91.76 E-value=1.3 Score=26.77 Aligned_cols=66 Identities=17% Similarity=0.087 Sum_probs=45.2
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHh
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMK 73 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~ 73 (142)
+|..+|-++......+..++..|+ .+.....++.+.+..+. ..++|+|++|...+. -.++++.+.+
T Consensus 4 ~ilivdd~~~~~~~l~~~l~~~g~--~vv~~~~~~~~a~~~~~-----~~~~dlil~D~~l~~~~g~~~~~~l~~ 71 (120)
T 1tmy_A 4 RVLIVDDAAFMRMMLKDIITKAGY--EVAGEATNGREAVEKYK-----ELKPDIVTMDITMPEMNGIDAIKEIMK 71 (120)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHH-----HHCCSEEEEECSCGGGCHHHHHHHHHH
T ss_pred eEEEEcCcHHHHHHHHHHHhhcCc--EEEEEECCHHHHHHHHH-----hcCCCEEEEeCCCCCCcHHHHHHHHHh
Confidence 367789999999999999987765 33335667777666553 346999999976443 2345555544
No 335
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=91.63 E-value=0.18 Score=32.50 Aligned_cols=66 Identities=17% Similarity=0.187 Sum_probs=45.8
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCc--HHHHHHHHh
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNY--CNYHERLMK 73 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~--~~~~~~~~~ 73 (142)
+|.-||=++......+..++..|.. +...-.++.+.+..+. ..+||+|++|-..+.. .+..+.+.+
T Consensus 10 rILiVdD~~~~~~~l~~~L~~~G~~--v~~~a~~g~eAl~~~~-----~~~~DlvllDi~mP~~~G~el~~~lr~ 77 (123)
T 2lpm_A 10 RVLVVEDESMIAMLIEDTLCELGHE--VAATASRMQEALDIAR-----KGQFDIAIIDVNLDGEPSYPVADILAE 77 (123)
T ss_dssp CEEEESSSTTTSHHHHHHHHHHCCC--CCBCSCCHHHHHHHHH-----HCCSSEEEECSSSSSCCSHHHHHHHHH
T ss_pred EEEEEeCCHHHHHHHHHHHHHCCCE--EEEEECCHHHHHHHHH-----hCCCCEEEEecCCCCCCHHHHHHHHHc
Confidence 4778999999999999999999874 3223456666666553 4689999999754432 334454443
No 336
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=91.62 E-value=1.5 Score=27.19 Aligned_cols=72 Identities=18% Similarity=0.197 Sum_probs=48.4
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHhcccCC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMKLLKVG 78 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~~L~~g 78 (142)
+|..+|-++...+..+..++..|. .+. ...++.+.+..+. ...+|+|++|...+. -.++++.+.+. .++
T Consensus 5 ~Ilivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~al~~~~-----~~~~dlvl~D~~l~~~~g~~~~~~l~~~-~~~ 75 (132)
T 3crn_A 5 RILIVDDDTAILDSTKQILEFEGY--EVE-IAATAGEGLAKIE-----NEFFNLALFXIKLPDMEGTELLEKAHKL-RPG 75 (132)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTC--EEE-EESSHHHHHHHHH-----HSCCSEEEECSBCSSSBHHHHHHHHHHH-CTT
T ss_pred EEEEEeCCHHHHHHHHHHHHHCCc--eEE-EeCCHHHHHHHHh-----cCCCCEEEEecCCCCCchHHHHHHHHhh-CCC
Confidence 367899999999999999988765 354 5667777776653 357999999975432 24455555443 344
Q ss_pred eEE
Q 032390 79 GIA 81 (142)
Q Consensus 79 G~i 81 (142)
..+
T Consensus 76 ~~i 78 (132)
T 3crn_A 76 MKK 78 (132)
T ss_dssp SEE
T ss_pred CcE
Confidence 333
No 337
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=91.25 E-value=0.3 Score=36.61 Aligned_cols=74 Identities=18% Similarity=0.188 Sum_probs=47.2
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|++++.+++..+.+++ +|...-+.....+..+.+..+. .+..+|+|| |+.- ....++.+.+.|++||.
T Consensus 193 ~Vi~~~~~~~~~~~~~~----lGa~~vi~~~~~~~~~~v~~~t----~g~g~D~v~-d~~g--~~~~~~~~~~~l~~~G~ 261 (352)
T 3fpc_A 193 RIFAVGSRKHCCDIALE----YGATDIINYKNGDIVEQILKAT----DGKGVDKVV-IAGG--DVHTFAQAVKMIKPGSD 261 (352)
T ss_dssp SEEEECCCHHHHHHHHH----HTCCEEECGGGSCHHHHHHHHT----TTCCEEEEE-ECSS--CTTHHHHHHHHEEEEEE
T ss_pred EEEEECCCHHHHHHHHH----hCCceEEcCCCcCHHHHHHHHc----CCCCCCEEE-ECCC--ChHHHHHHHHHHhcCCE
Confidence 48899999998888765 4543222222234444444442 234699998 4432 23467888899999999
Q ss_pred EEEec
Q 032390 81 AVYDN 85 (142)
Q Consensus 81 iv~dn 85 (142)
++.-.
T Consensus 262 ~v~~G 266 (352)
T 3fpc_A 262 IGNVN 266 (352)
T ss_dssp EEECC
T ss_pred EEEec
Confidence 98643
No 338
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=91.23 E-value=1.9 Score=27.61 Aligned_cols=65 Identities=12% Similarity=-0.036 Sum_probs=47.0
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHh
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMK 73 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~ 73 (142)
+|..+|-++...+..++.++..|+ .+ ....++.+.+..+. ..++|+|++|...+. -.++++.+..
T Consensus 9 ~ILivdd~~~~~~~l~~~L~~~g~--~v-~~~~~~~~al~~l~-----~~~~dlii~D~~l~~~~g~~~~~~lr~ 75 (154)
T 3gt7_A 9 EILIVEDSPTQAEHLKHILEETGY--QT-EHVRNGREAVRFLS-----LTRPDLIISDVLMPEMDGYALCRWLKG 75 (154)
T ss_dssp EEEEECSCHHHHHHHHHHHHTTTC--EE-EEESSHHHHHHHHT-----TCCCSEEEEESCCSSSCHHHHHHHHHH
T ss_pred cEEEEeCCHHHHHHHHHHHHHCCC--EE-EEeCCHHHHHHHHH-----hCCCCEEEEeCCCCCCCHHHHHHHHHh
Confidence 377899999999999999998875 34 34567777777663 467999999975432 3455555554
No 339
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=91.15 E-value=1.8 Score=27.00 Aligned_cols=66 Identities=14% Similarity=0.031 Sum_probs=46.1
Q ss_pred CEEEEeCChhHHHHHHHHHHH-cCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc--CcHHHHHHHHh
Q 032390 1 MITAIDVNRETYEIGLPIIKK-AGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD--NYCNYHERLMK 73 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~-~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~--~~~~~~~~~~~ 73 (142)
+|..+|-++......+..++. .|+ .+-....+..+.+..+. ..++|+|++|...+ .-.++++.+.+
T Consensus 10 ~iLivdd~~~~~~~l~~~L~~~~~~--~~v~~~~~~~~a~~~l~-----~~~~dlii~d~~l~~~~g~~~~~~l~~ 78 (143)
T 3cnb_A 10 SILIIEDDKEFADMLTQFLENLFPY--AKIKIAYNPFDAGDLLH-----TVKPDVVMLDLMMVGMDGFSICHRIKS 78 (143)
T ss_dssp EEEEECSCHHHHHHHHHHHHHHCTT--CEEEEECSHHHHHHHHH-----HTCCSEEEEETTCTTSCHHHHHHHHHT
T ss_pred eEEEEECCHHHHHHHHHHHHhccCc--cEEEEECCHHHHHHHHH-----hcCCCEEEEecccCCCcHHHHHHHHHh
Confidence 367899999999999999988 776 32344556666666553 35799999997543 23455666655
No 340
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=91.00 E-value=2 Score=27.33 Aligned_cols=72 Identities=17% Similarity=0.177 Sum_probs=48.0
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcc----cCCCceeEEEEcCCCc--CcHHHHHHHHh
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYS----ENEGSFDYAFVDADKD--NYCNYHERLMK 73 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~----~~~~~fD~IfiD~~~~--~~~~~~~~~~~ 73 (142)
+|..+|-++...+..+..++..|....+. ...++.+.+..+.... .....+|+|++|...+ +-.++++.+.+
T Consensus 6 ~ILivddd~~~~~~l~~~L~~~g~~~~v~-~~~~~~~al~~l~~~~~~~~~~~~~~dliilD~~l~~~~g~~~~~~lr~ 83 (152)
T 3heb_A 6 TIVMIEDDLGHARLIEKNIRRAGVNNEII-AFTDGTSALNYLFGDDKSGRVSAGRAQLVLLDLNLPDMTGIDILKLVKE 83 (152)
T ss_dssp EEEEECCCHHHHHHHHHHHHHTTCCCCEE-EESSHHHHHHHHHCTTSSSGGGTTCBEEEEECSBCSSSBHHHHHHHHHH
T ss_pred eEEEEeCCHHHHHHHHHHHHhCCCcceEE-EeCCHHHHHHHHhccccccccccCCCCEEEEeCCCCCCcHHHHHHHHHh
Confidence 36789999999999999999998753444 3456666666552000 0145799999997533 23455666655
No 341
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=90.96 E-value=1.8 Score=26.86 Aligned_cols=73 Identities=10% Similarity=-0.020 Sum_probs=48.7
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc--CcHHHHHHHHhcccCC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD--NYCNYHERLMKLLKVG 78 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~--~~~~~~~~~~~~L~~g 78 (142)
+|..+|-++...+..+..++..+. .+ ....++.+.+..+. ..++|+|++|...+ +-.++++.+.+. .++
T Consensus 9 ~ilivdd~~~~~~~l~~~L~~~~~--~v-~~~~~~~~a~~~l~-----~~~~dlvi~d~~l~~~~g~~~~~~l~~~-~~~ 79 (137)
T 3hdg_A 9 KILIVEDDTDAREWLSTIISNHFP--EV-WSAGDGEEGERLFG-----LHAPDVIITDIRMPKLGGLEMLDRIKAG-GAK 79 (137)
T ss_dssp CEEEECSCHHHHHHHHHHHHTTCS--CE-EEESSHHHHHHHHH-----HHCCSEEEECSSCSSSCHHHHHHHHHHT-TCC
T ss_pred EEEEEeCCHHHHHHHHHHHHhcCc--EE-EEECCHHHHHHHHh-----ccCCCEEEEeCCCCCCCHHHHHHHHHhc-CCC
Confidence 478899999999999999988543 23 34556767666654 34799999997543 234556655543 344
Q ss_pred eEEE
Q 032390 79 GIAV 82 (142)
Q Consensus 79 G~iv 82 (142)
..++
T Consensus 80 ~~ii 83 (137)
T 3hdg_A 80 PYVI 83 (137)
T ss_dssp CEEE
T ss_pred CcEE
Confidence 4444
No 342
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=90.96 E-value=1.8 Score=26.64 Aligned_cols=66 Identities=14% Similarity=0.030 Sum_probs=46.5
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCC-ceeEEEEcCCCc---CcHHHHHHHHhc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG-SFDYAFVDADKD---NYCNYHERLMKL 74 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~-~fD~IfiD~~~~---~~~~~~~~~~~~ 74 (142)
+|..+|-++...+..+..++..|+ .+. ...++.+.+..+. .. ++|+|++|...+ .-.++++.+.+.
T Consensus 7 ~ilivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~l~-----~~~~~dlvi~d~~l~~~~~g~~~~~~l~~~ 76 (132)
T 2rdm_A 7 TILLADDEAILLLDFESTLTDAGF--LVT-AVSSGAKAIEMLK-----SGAAIDGVVTDIRFCQPPDGWQVARVAREI 76 (132)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTTC--EEE-EESSHHHHHHHHH-----TTCCCCEEEEESCCSSSSCHHHHHHHHHHH
T ss_pred eEEEEcCcHHHHHHHHHHHHHcCC--EEE-EECCHHHHHHHHH-----cCCCCCEEEEeeeCCCCCCHHHHHHHHHhc
Confidence 367889999999999999988776 344 3567777776663 34 799999997543 234556666554
No 343
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=90.90 E-value=0.83 Score=33.92 Aligned_cols=73 Identities=16% Similarity=0.068 Sum_probs=49.8
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeEE
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIA 81 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~i 81 (142)
+++++.+++..+.|++ +|...-+.....+..+....+.+ ...+|+||-... ....++.+.++|++||.+
T Consensus 188 vi~~~~~~~k~~~a~~----lGa~~~i~~~~~~~~~~~~~~~~----~~g~d~v~d~~G---~~~~~~~~~~~l~~~G~~ 256 (346)
T 4a2c_A 188 VTAIDISSEKLALAKS----FGAMQTFNSSEMSAPQMQSVLRE----LRFNQLILETAG---VPQTVELAVEIAGPHAQL 256 (346)
T ss_dssp EEEEESCHHHHHHHHH----TTCSEEEETTTSCHHHHHHHHGG----GCSSEEEEECSC---SHHHHHHHHHHCCTTCEE
T ss_pred EEEEechHHHHHHHHH----cCCeEEEeCCCCCHHHHHHhhcc----cCCccccccccc---ccchhhhhhheecCCeEE
Confidence 5789999998888764 67654344444555566555532 356888874433 356788889999999999
Q ss_pred EEec
Q 032390 82 VYDN 85 (142)
Q Consensus 82 v~dn 85 (142)
+.-.
T Consensus 257 v~~g 260 (346)
T 4a2c_A 257 ALVG 260 (346)
T ss_dssp EECC
T ss_pred EEEe
Confidence 8643
No 344
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=90.90 E-value=0.32 Score=36.76 Aligned_cols=49 Identities=18% Similarity=0.164 Sum_probs=36.0
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHH-HhhcccCCCceeEEEEcCCC
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQ-LLKYSENEGSFDYAFVDADK 61 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~-~~~~~~~~~~fD~IfiD~~~ 61 (142)
|.++|+++.+++..+.|+.. ..++.+|+.++... +. ...+|+|+.++++
T Consensus 29 v~~~E~d~~a~~~~~~N~~~------~~~~~~Di~~~~~~~~~-----~~~~D~l~~gpPC 78 (343)
T 1g55_A 29 VAAIDVNTVANEVYKYNFPH------TQLLAKTIEGITLEEFD-----RLSFDMILMSPPC 78 (343)
T ss_dssp EEEECCCHHHHHHHHHHCTT------SCEECSCGGGCCHHHHH-----HHCCSEEEECCC-
T ss_pred EEEEeCCHHHHHHHHHhccc------cccccCCHHHccHhHcC-----cCCcCEEEEcCCC
Confidence 68999999999999998742 34678888775432 21 1269999999873
No 345
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=90.85 E-value=1.8 Score=29.64 Aligned_cols=71 Identities=20% Similarity=0.223 Sum_probs=45.9
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhc--------ccCCCceeEEEEcCCCcC--cHHHHHH
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKY--------SENEGSFDYAFVDADKDN--YCNYHER 70 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~--------~~~~~~fD~IfiD~~~~~--~~~~~~~ 70 (142)
+|..||-++...+..+..++..|+. .+ ....++.+.+..+... ......||+|++|...+. -.++++.
T Consensus 63 ~ILiVdDd~~~~~~l~~~L~~~g~~-~v-~~a~~~~eal~~l~~~~~~~~~~~~~~~~~~dlillD~~lp~~~G~el~~~ 140 (206)
T 3mm4_A 63 RVLVVDDNFISRKVATGKLKKMGVS-EV-EQCDSGKEALRLVTEGLTQREEQGSVDKLPFDYIFMDCQMPEMDGYEATRE 140 (206)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCS-EE-EEESSHHHHHHHHHHHHHHHHHHTCSSCCSCSEEEEESCCSSSCHHHHHHH
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCC-ee-eeeCCHHHHHHHHHhhcccccccccccCCCCCEEEEcCCCCCCCHHHHHHH
Confidence 3778999999999999999998763 23 3445666666555310 000137999999976443 3445555
Q ss_pred HHh
Q 032390 71 LMK 73 (142)
Q Consensus 71 ~~~ 73 (142)
+.+
T Consensus 141 lr~ 143 (206)
T 3mm4_A 141 IRK 143 (206)
T ss_dssp HHH
T ss_pred HHh
Confidence 544
No 346
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=90.69 E-value=2 Score=26.87 Aligned_cols=72 Identities=11% Similarity=0.097 Sum_probs=47.1
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccC---C--CceeEEEEcCCCcC--cHHHHHHHHh
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSEN---E--GSFDYAFVDADKDN--YCNYHERLMK 73 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~---~--~~fD~IfiD~~~~~--~~~~~~~~~~ 73 (142)
+|..+|-++...+..+..++..|....+. ...+..+.+..+...... . ..+|+|++|...+. -.++++.+.+
T Consensus 8 ~iLivdd~~~~~~~l~~~L~~~g~~~~v~-~~~~~~~al~~l~~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~ 86 (149)
T 1k66_A 8 PLLVVEDSDEDFSTFQRLLQREGVVNPIY-RCITGDQALDFLYQTGSYCNPDIAPRPAVILLDLNLPGTDGREVLQEIKQ 86 (149)
T ss_dssp CEEEECCCHHHHHHHHHHHHHTTBCSCEE-EECSHHHHHHHHHTCCSSSCGGGCCCCSEEEECSCCSSSCHHHHHHHHTT
T ss_pred cEEEEECCHHHHHHHHHHHHHcCCCceEE-EECCHHHHHHHHHhcccccCcccCCCCcEEEEECCCCCCCHHHHHHHHHh
Confidence 47789999999999999999988642343 455666666665310000 0 67999999976443 3445555554
No 347
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=90.47 E-value=0.69 Score=35.03 Aligned_cols=73 Identities=25% Similarity=0.387 Sum_probs=47.6
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEE--EccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFI--ESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVG 78 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~--~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~g 78 (142)
+|++++.+++..+.|+ .+|...-+... ..+..+.+..+. ++.+|+|| |+. .....++.+.+.|++|
T Consensus 220 ~Vi~~~~~~~~~~~a~----~lGa~~vi~~~~~~~~~~~~i~~~~-----~gg~D~vi-d~~--g~~~~~~~~~~~l~~g 287 (378)
T 3uko_A 220 RIIGIDIDSKKYETAK----KFGVNEFVNPKDHDKPIQEVIVDLT-----DGGVDYSF-ECI--GNVSVMRAALECCHKG 287 (378)
T ss_dssp CEEEECSCTTHHHHHH----TTTCCEEECGGGCSSCHHHHHHHHT-----TSCBSEEE-ECS--CCHHHHHHHHHTBCTT
T ss_pred eEEEEcCCHHHHHHHH----HcCCcEEEccccCchhHHHHHHHhc-----CCCCCEEE-ECC--CCHHHHHHHHHHhhcc
Confidence 4889999999988776 35653212211 233445555542 34899998 443 2356788899999996
Q ss_pred -eEEEEec
Q 032390 79 -GIAVYDN 85 (142)
Q Consensus 79 -G~iv~dn 85 (142)
|.++.-.
T Consensus 288 ~G~iv~~G 295 (378)
T 3uko_A 288 WGTSVIVG 295 (378)
T ss_dssp TCEEEECS
T ss_pred CCEEEEEc
Confidence 9987643
No 348
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=90.42 E-value=2.3 Score=27.05 Aligned_cols=74 Identities=11% Similarity=0.034 Sum_probs=47.9
Q ss_pred CEEEEeCChhHHHHHHHHHHHc-CCCCcEEEEEccHHHHHHHHhhcccCC-CceeEEEEcCCCcC--cHHHHHHHHhccc
Q 032390 1 MITAIDVNRETYEIGLPIIKKA-GVDHKINFIESEALSVLDQLLKYSENE-GSFDYAFVDADKDN--YCNYHERLMKLLK 76 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~-~~~~~v~~~~~da~~~l~~~~~~~~~~-~~fD~IfiD~~~~~--~~~~~~~~~~~L~ 76 (142)
+|..+|-++...+..+..++.. |. ..-....+..+.+..+. . ..+|+|++|...+. -.++++.+.+. .
T Consensus 5 ~iLivdd~~~~~~~l~~~L~~~~g~--~~v~~~~~~~~a~~~l~-----~~~~~dlvi~d~~l~~~~g~~~~~~l~~~-~ 76 (154)
T 2qsj_A 5 VVLIVDDHHLIRAGAKNLLEGAFSG--MRVEGAETVSDALAFLE-----ADNTVDLILLDVNLPDAEAIDGLVRLKRF-D 76 (154)
T ss_dssp EEEEECSCHHHHHHHHHHHHHHCTT--EEEEEESSHHHHHHHHH-----TTCCCSEEEECC------CHHHHHHHHHH-C
T ss_pred EEEEEcCCHHHHHHHHHHHHhCCCc--eEEEEecCHHHHHHHHh-----ccCCCCEEEEeCCCCCCchHHHHHHHHHh-C
Confidence 3678999999999999999887 54 23344566777766663 4 67999999975432 34556655544 3
Q ss_pred CCeEEE
Q 032390 77 VGGIAV 82 (142)
Q Consensus 77 ~gG~iv 82 (142)
|+..++
T Consensus 77 ~~~~ii 82 (154)
T 2qsj_A 77 PSNAVA 82 (154)
T ss_dssp TTSEEE
T ss_pred CCCeEE
Confidence 444444
No 349
>1s8n_A Putative antiterminator; RV1626, structural genomics, transcriptional antiterminator, component system, PSI; 1.48A {Mycobacterium tuberculosis} SCOP: c.23.1.1 PDB: 1sd5_A
Probab=90.21 E-value=2.8 Score=28.23 Aligned_cols=75 Identities=8% Similarity=0.014 Sum_probs=50.6
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHhcccCC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMKLLKVG 78 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~~L~~g 78 (142)
+|..+|-++......+..++..|+ .+.....++.+.+..+. ...+|+|++|...+. -.++++.+... .+.
T Consensus 15 ~iLivdd~~~~~~~l~~~L~~~g~--~v~~~~~~~~~al~~~~-----~~~~dlvi~D~~~p~~~g~~~~~~l~~~-~~~ 86 (205)
T 1s8n_A 15 RVLIAEDEALIRMDLAEMLREEGY--EIVGEAGDGQEAVELAE-----LHKPDLVIMDVKMPRRDGIDAASEIASK-RIA 86 (205)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHH-----HHCCSEEEEESSCSSSCHHHHHHHHHHT-TCS
T ss_pred cEEEEECCHHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHh-----hcCCCEEEEeCCCCCCChHHHHHHHHhc-CCC
Confidence 367899999999999999988765 34445677777776653 346999999975433 34455555443 334
Q ss_pred eEEEE
Q 032390 79 GIAVY 83 (142)
Q Consensus 79 G~iv~ 83 (142)
.+|++
T Consensus 87 pii~l 91 (205)
T 1s8n_A 87 PIVVL 91 (205)
T ss_dssp CEEEE
T ss_pred CEEEE
Confidence 55554
No 350
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=90.21 E-value=2.4 Score=26.95 Aligned_cols=73 Identities=10% Similarity=0.036 Sum_probs=46.7
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHhcccCC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMKLLKVG 78 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~~L~~g 78 (142)
+|..+|-++...+..+..++. |. .+. ...+..+.+..+.. ..+||+|++|...+. -.++++.+.+.- |+
T Consensus 6 ~ILivdd~~~~~~~l~~~L~~-~~--~v~-~~~~~~~a~~~l~~----~~~~dlvi~D~~l~~~~g~~~~~~l~~~~-~~ 76 (151)
T 3kcn_A 6 RILLVDDDYSLLNTLKRNLSF-DF--EVT-TCESGPEALACIKK----SDPFSVIMVDMRMPGMEGTEVIQKARLIS-PN 76 (151)
T ss_dssp EEEEECSCHHHHHHHHHHHTT-TS--EEE-EESSHHHHHHHHHH----SCCCSEEEEESCCSSSCHHHHHHHHHHHC-SS
T ss_pred eEEEEeCCHHHHHHHHHHhcc-Cc--eEE-EeCCHHHHHHHHHc----CCCCCEEEEeCCCCCCcHHHHHHHHHhcC-CC
Confidence 367899999999998888854 42 344 45667777666542 345899999975432 345566555433 44
Q ss_pred eEEE
Q 032390 79 GIAV 82 (142)
Q Consensus 79 G~iv 82 (142)
..++
T Consensus 77 ~~ii 80 (151)
T 3kcn_A 77 SVYL 80 (151)
T ss_dssp CEEE
T ss_pred cEEE
Confidence 4443
No 351
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=90.19 E-value=0.41 Score=35.58 Aligned_cols=72 Identities=22% Similarity=0.205 Sum_probs=45.4
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|++++.+++..+.+++ +|...-+.....+..+.+.... ....+|+||--... ..++.+.+.|+++|.
T Consensus 175 ~Vi~~~~~~~~~~~~~~----~ga~~~~~~~~~~~~~~~~~~~----~~~g~D~vid~~g~----~~~~~~~~~l~~~G~ 242 (334)
T 3qwb_A 175 HTIAVASTDEKLKIAKE----YGAEYLINASKEDILRQVLKFT----NGKGVDASFDSVGK----DTFEISLAALKRKGV 242 (334)
T ss_dssp EEEEEESSHHHHHHHHH----TTCSEEEETTTSCHHHHHHHHT----TTSCEEEEEECCGG----GGHHHHHHHEEEEEE
T ss_pred EEEEEeCCHHHHHHHHH----cCCcEEEeCCCchHHHHHHHHh----CCCCceEEEECCCh----HHHHHHHHHhccCCE
Confidence 47889999988887765 4543212222234444444432 23579999854432 457788899999999
Q ss_pred EEEe
Q 032390 81 AVYD 84 (142)
Q Consensus 81 iv~d 84 (142)
++.-
T Consensus 243 iv~~ 246 (334)
T 3qwb_A 243 FVSF 246 (334)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 9874
No 352
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=90.18 E-value=2.2 Score=26.52 Aligned_cols=64 Identities=11% Similarity=0.015 Sum_probs=44.8
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKL 74 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~ 74 (142)
+|..+|-++...+..+..++..|+ .+. ...++.+.+..+. ...+|+|+ -+. ..-.++++.+...
T Consensus 20 ~ilivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~al~~l~-----~~~~dlvi-~~~-~~g~~~~~~l~~~ 83 (137)
T 2pln_A 20 RVLLIEKNSVLGGEIEKGLNVKGF--MAD-VTESLEDGEYLMD-----IRNYDLVM-VSD-KNALSFVSRIKEK 83 (137)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTC--EEE-EESCHHHHHHHHH-----HSCCSEEE-ECS-TTHHHHHHHHHHH
T ss_pred eEEEEeCCHHHHHHHHHHHHHcCc--EEE-EeCCHHHHHHHHH-----cCCCCEEE-EcC-ccHHHHHHHHHhc
Confidence 367899999999999999998775 354 5666777766654 35799999 332 2335566666655
No 353
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=90.18 E-value=0.32 Score=36.91 Aligned_cols=76 Identities=11% Similarity=0.148 Sum_probs=47.2
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|++++.+++..+.+++ +|...-+.....+..+.+..... ..++.+|+|| |+. .....++.+.+.|++||.
T Consensus 209 ~Vi~~~~~~~~~~~a~~----lGa~~vi~~~~~~~~~~i~~~~~--~~~gg~Dvvi-d~~--G~~~~~~~~~~~l~~~G~ 279 (370)
T 4ej6_A 209 TVILSTRQATKRRLAEE----VGATATVDPSAGDVVEAIAGPVG--LVPGGVDVVI-ECA--GVAETVKQSTRLAKAGGT 279 (370)
T ss_dssp EEEEECSCHHHHHHHHH----HTCSEEECTTSSCHHHHHHSTTS--SSTTCEEEEE-ECS--CCHHHHHHHHHHEEEEEE
T ss_pred EEEEECCCHHHHHHHHH----cCCCEEECCCCcCHHHHHHhhhh--ccCCCCCEEE-ECC--CCHHHHHHHHHHhccCCE
Confidence 37889999998887775 46542222223344444433100 0134799998 443 235678889999999999
Q ss_pred EEEec
Q 032390 81 AVYDN 85 (142)
Q Consensus 81 iv~dn 85 (142)
++.-.
T Consensus 280 vv~~G 284 (370)
T 4ej6_A 280 VVILG 284 (370)
T ss_dssp EEECS
T ss_pred EEEEe
Confidence 98743
No 354
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=90.17 E-value=2 Score=26.04 Aligned_cols=65 Identities=12% Similarity=0.069 Sum_probs=44.5
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHhc
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMKL 74 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~~ 74 (142)
|..+|-++...+..+..++..|+ .+. ...++.+.+..+. ..++|+|++|...+. -.++++.+.+.
T Consensus 6 ilivdd~~~~~~~l~~~l~~~~~--~v~-~~~~~~~a~~~~~-----~~~~dlvi~D~~l~~~~g~~~~~~l~~~ 72 (123)
T 1xhf_A 6 ILIVEDELVTRNTLKSIFEAEGY--DVF-EATDGAEMHQILS-----EYDINLVIMDINLPGKNGLLLARELREQ 72 (123)
T ss_dssp EEEECSCHHHHHHHHHHHHTTTC--EEE-EESSHHHHHHHHH-----HSCCSEEEECSSCSSSCHHHHHHHHHHH
T ss_pred EEEEeCCHHHHHHHHHHHhhCCc--EEE-EeCCHHHHHHHHh-----cCCCCEEEEcCCCCCCCHHHHHHHHHhC
Confidence 67789999999999999987765 343 4566666666553 357999999975432 24455555543
No 355
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=90.15 E-value=2.1 Score=26.10 Aligned_cols=72 Identities=14% Similarity=0.113 Sum_probs=47.6
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHhcccCCe
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMKLLKVGG 79 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~~L~~gG 79 (142)
|..+|-++...+..+..++..|. .+. ...++.+.+..+. ..++|+|++|...+. -.++++.+.+. .|+.
T Consensus 6 ilivdd~~~~~~~l~~~l~~~~~--~v~-~~~~~~~a~~~~~-----~~~~dlvl~D~~l~~~~g~~~~~~l~~~-~~~~ 76 (124)
T 1srr_A 6 ILIVDDQSGIRILLNEVFNKEGY--QTF-QAANGLQALDIVT-----KERPDLVLLDMKIPGMDGIEILKRMKVI-DENI 76 (124)
T ss_dssp EEEECSCHHHHHHHHHHHHTTTC--EEE-EESSHHHHHHHHH-----HHCCSEEEEESCCTTCCHHHHHHHHHHH-CTTC
T ss_pred EEEEeCCHHHHHHHHHHHHHCCc--EEE-EeCCHHHHHHHHh-----ccCCCEEEEecCCCCCCHHHHHHHHHHh-CCCC
Confidence 67889999999999999987765 343 5566666666553 346999999975433 24455555443 3444
Q ss_pred EEE
Q 032390 80 IAV 82 (142)
Q Consensus 80 ~iv 82 (142)
.++
T Consensus 77 ~ii 79 (124)
T 1srr_A 77 RVI 79 (124)
T ss_dssp EEE
T ss_pred CEE
Confidence 443
No 356
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=90.07 E-value=2.2 Score=26.40 Aligned_cols=75 Identities=12% Similarity=0.023 Sum_probs=49.1
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHhcccCC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMKLLKVG 78 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~~L~~g 78 (142)
+|..+|-++...+..+..++..|+. +.. ..+..+.+..+.. ...+|+|++|...+. -.++++.+.+.-.+.
T Consensus 9 ~ilivdd~~~~~~~l~~~L~~~g~~--v~~-~~~~~~a~~~~~~----~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ 81 (136)
T 3hdv_A 9 LVLVVDDNAVNREALILYLKSRGID--AVG-ADGAEEARLYLHY----QKRIGLMITDLRMQPESGLDLIRTIRASERAA 81 (136)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCC--EEE-ESSHHHHHHHHHH----CTTEEEEEECSCCSSSCHHHHHHHHHTSTTTT
T ss_pred eEEEECCCHHHHHHHHHHHHHcCce--EEE-eCCHHHHHHHHHh----CCCCcEEEEeccCCCCCHHHHHHHHHhcCCCC
Confidence 3678999999999999999998763 443 5566666655532 334999999975432 345566665431344
Q ss_pred eEEE
Q 032390 79 GIAV 82 (142)
Q Consensus 79 G~iv 82 (142)
..++
T Consensus 82 ~~ii 85 (136)
T 3hdv_A 82 LSII 85 (136)
T ss_dssp CEEE
T ss_pred CCEE
Confidence 3333
No 357
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=89.91 E-value=2.4 Score=26.51 Aligned_cols=75 Identities=15% Similarity=0.087 Sum_probs=49.6
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHhcccCC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMKLLKVG 78 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~~L~~g 78 (142)
+|..+|-++...+..+..++..|. .+. ...+..+.+..+.. ....+|+|++|...+. -.++++.+.+. .|+
T Consensus 5 ~ilivdd~~~~~~~l~~~l~~~g~--~v~-~~~~~~~a~~~~~~---~~~~~dlvi~d~~l~~~~g~~~~~~l~~~-~~~ 77 (143)
T 3jte_A 5 KILVIDDESTILQNIKFLLEIDGN--EVL-TASSSTEGLRIFTE---NCNSIDVVITDMKMPKLSGMDILREIKKI-TPH 77 (143)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTC--EEE-EESSHHHHHHHHHH---TTTTCCEEEEESCCSSSCHHHHHHHHHHH-CTT
T ss_pred EEEEEcCCHHHHHHHHHHHHhCCc--eEE-EeCCHHHHHHHHHh---CCCCCCEEEEeCCCCCCcHHHHHHHHHHh-CCC
Confidence 367899999999999999998875 233 55566666665531 1357999999975432 34556666554 344
Q ss_pred eEEE
Q 032390 79 GIAV 82 (142)
Q Consensus 79 G~iv 82 (142)
..++
T Consensus 78 ~~ii 81 (143)
T 3jte_A 78 MAVI 81 (143)
T ss_dssp CEEE
T ss_pred CeEE
Confidence 4443
No 358
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=89.88 E-value=2.1 Score=25.88 Aligned_cols=64 Identities=11% Similarity=0.131 Sum_probs=44.1
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHh
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMK 73 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~ 73 (142)
|..+|-++...+..+..++..|. .+. ...+..+.+..+. ..++|+|++|...+. -.++++.+.+
T Consensus 5 ilivdd~~~~~~~l~~~L~~~~~--~v~-~~~~~~~~~~~~~-----~~~~dlvi~d~~l~~~~g~~~~~~l~~ 70 (122)
T 1zgz_A 5 IVIVEDEPVTQARLQSYFTQEGY--TVS-VTASGAGLREIMQ-----NQSVDLILLDINLPDENGLMLTRALRE 70 (122)
T ss_dssp EEEECSSHHHHHHHHHHHHHTTC--EEE-EESSHHHHHHHHH-----HSCCSEEEEESCCSSSCHHHHHHHHHT
T ss_pred EEEEECCHHHHHHHHHHHHHCCC--eEE-EecCHHHHHHHHh-----cCCCCEEEEeCCCCCCChHHHHHHHHh
Confidence 67789999999999999988765 343 4556666665543 357999999975433 2445555555
No 359
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=89.72 E-value=0.53 Score=34.85 Aligned_cols=73 Identities=8% Similarity=0.051 Sum_probs=46.2
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|++++.+++..+.+++ +|...-++....+..+.+.... ....+|+||--... ..++.+.+.|+++|.
T Consensus 167 ~Vi~~~~~~~~~~~~~~----~Ga~~~~~~~~~~~~~~~~~~~----~~~g~Dvvid~~g~----~~~~~~~~~l~~~G~ 234 (325)
T 3jyn_A 167 KLIGTVSSPEKAAHAKA----LGAWETIDYSHEDVAKRVLELT----DGKKCPVVYDGVGQ----DTWLTSLDSVAPRGL 234 (325)
T ss_dssp EEEEEESSHHHHHHHHH----HTCSEEEETTTSCHHHHHHHHT----TTCCEEEEEESSCG----GGHHHHHTTEEEEEE
T ss_pred EEEEEeCCHHHHHHHHH----cCCCEEEeCCCccHHHHHHHHh----CCCCceEEEECCCh----HHHHHHHHHhcCCCE
Confidence 47889999998888774 4543222222234444444432 23579998854432 357788899999999
Q ss_pred EEEec
Q 032390 81 AVYDN 85 (142)
Q Consensus 81 iv~dn 85 (142)
++.-.
T Consensus 235 iv~~g 239 (325)
T 3jyn_A 235 VVSFG 239 (325)
T ss_dssp EEECC
T ss_pred EEEEe
Confidence 98743
No 360
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=89.72 E-value=2.1 Score=26.89 Aligned_cols=71 Identities=4% Similarity=-0.042 Sum_probs=46.5
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHhcccCCe
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMKLLKVGG 79 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~~L~~gG 79 (142)
|..+|-++...+..+..++..|. .+. ...++.+.+..+. ..++|+|++|...+. -.++++.+.+. .+..
T Consensus 7 ILivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~l~-----~~~~dlvllD~~l~~~~g~~l~~~l~~~-~~~~ 77 (137)
T 3cfy_A 7 VLLVEDSTSLAILYKQYVKDEPY--DIF-HVETGRDAIQFIE-----RSKPQLIILDLKLPDMSGEDVLDWINQN-DIPT 77 (137)
T ss_dssp EEEECSCTTHHHHHHHHTTTSSS--EEE-EESSHHHHHHHHH-----HHCCSEEEECSBCSSSBHHHHHHHHHHT-TCCC
T ss_pred EEEEeCCHHHHHHHHHHHHhcCc--eEE-EeCCHHHHHHHHH-----hcCCCEEEEecCCCCCCHHHHHHHHHhc-CCCC
Confidence 67889999999988888876654 343 4566666666553 346999999975432 34455555543 3443
Q ss_pred EE
Q 032390 80 IA 81 (142)
Q Consensus 80 ~i 81 (142)
.+
T Consensus 78 ~i 79 (137)
T 3cfy_A 78 SV 79 (137)
T ss_dssp EE
T ss_pred CE
Confidence 33
No 361
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=89.72 E-value=1.5 Score=27.55 Aligned_cols=65 Identities=14% Similarity=0.145 Sum_probs=45.5
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHh
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMK 73 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~ 73 (142)
+|..+|-++...+..+..++..|+ .+. ...++.+.+..+. ...+|+|++|...+. -.++++.+..
T Consensus 5 ~ILivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~al~~l~-----~~~~dlvi~D~~l~~~~g~~~~~~l~~ 71 (138)
T 3c3m_A 5 TILVVDDSPMIVDVFVTMLERGGY--RPI-TAFSGEECLEALN-----ATPPDLVLLDIMMEPMDGWETLERIKT 71 (138)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTC--EEE-EESSHHHHHHHHH-----HSCCSEEEEESCCSSSCHHHHHHHHHH
T ss_pred eEEEEeCCHHHHHHHHHHHHHcCc--eEE-EeCCHHHHHHHHh-----ccCCCEEEEeCCCCCCCHHHHHHHHHc
Confidence 367899999999999999988765 344 4566777666553 357999999976443 2445555544
No 362
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=89.71 E-value=2.6 Score=27.41 Aligned_cols=76 Identities=14% Similarity=0.057 Sum_probs=48.7
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHhcccCC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMKLLKVG 78 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~~L~~g 78 (142)
+|..+|-++...+..+..++..+.. .+-....++.+.+..+. ...+|+|++|...+. -.++++.+... .+-
T Consensus 27 ~ILivdd~~~~~~~l~~~L~~~~~~-~~v~~~~~~~~al~~l~-----~~~~dlvilD~~l~~~~g~~l~~~lr~~-~~~ 99 (164)
T 3t8y_A 27 RVLVVDDSAFMRMVLKDIIDSQPDM-KVVGFAKDGLEAVEKAI-----ELKPDVITMDIEMPNLNGIEALKLIMKK-APT 99 (164)
T ss_dssp EEEEECSCHHHHHHHHHHHHTSTTE-EEEEEESSHHHHHHHHH-----HHCCSEEEECSSCSSSCHHHHHHHHHHH-SCC
T ss_pred EEEEEcCCHHHHHHHHHHHhcCCCe-EEEEecCCHHHHHHHhc-----cCCCCEEEEeCCCCCCCHHHHHHHHHhc-CCc
Confidence 3678999999999999999876521 22234667777776654 346999999975433 34455555443 233
Q ss_pred eEEEE
Q 032390 79 GIAVY 83 (142)
Q Consensus 79 G~iv~ 83 (142)
-+|++
T Consensus 100 ~ii~~ 104 (164)
T 3t8y_A 100 RVIMV 104 (164)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 34444
No 363
>3n0r_A Response regulator; sigma factor, receiver, two-component SI transduction, signaling protein; HET: MSE GOL; 1.25A {Caulobacter vibrioides} PDB: 3t0y_A
Probab=89.64 E-value=1.1 Score=32.69 Aligned_cols=54 Identities=9% Similarity=0.071 Sum_probs=43.3
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD 62 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~ 62 (142)
|..+|=++......+..++..|. .+.....|+.+.+..+. ..+||+|++|-..+
T Consensus 163 ILvVdD~~~~~~~l~~~L~~~g~--~v~~~a~~g~eAl~~~~-----~~~~dlvl~D~~MP 216 (286)
T 3n0r_A 163 VLIIEDEPVIAADIEALVRELGH--DVTDIAATRGEALEAVT-----RRTPGLVLADIQLA 216 (286)
T ss_dssp EEEECCSHHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHH-----HCCCSEEEEESCCT
T ss_pred EEEEcCCHHHHHHHHHHhhccCc--eEEEEeCCHHHHHHHHH-----hCCCCEEEEcCCCC
Confidence 67799999999999999999876 35436778888887764 45799999997655
No 364
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=89.60 E-value=3 Score=29.20 Aligned_cols=65 Identities=17% Similarity=0.147 Sum_probs=46.3
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHh
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMK 73 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~ 73 (142)
+|..+|-++...+..+..++..|+ .+. ...++.+.+..+. ..++|+|++|...+. -.++++.+.+
T Consensus 25 ~ILivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~al~~~~-----~~~~dlvllD~~lp~~~g~~~~~~lr~ 91 (250)
T 3r0j_A 25 RVLVVDDEANIVELLSVSLKFQGF--EVY-TATNGAQALDRAR-----ETRPDAVILDVXMPGMDGFGVLRRLRA 91 (250)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTC--EEE-EESSHHHHHHHHH-----HHCCSEEEEESCCSSSCHHHHHHHHHH
T ss_pred eEEEEECCHHHHHHHHHHHHHCCC--EEE-EECCHHHHHHHHH-----hCCCCEEEEeCCCCCCCHHHHHHHHHh
Confidence 367889999999999999988875 354 5667777776653 347999999975443 3445555544
No 365
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=89.56 E-value=1 Score=33.81 Aligned_cols=72 Identities=8% Similarity=0.006 Sum_probs=44.4
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEcc---HHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESE---ALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKV 77 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~d---a~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~ 77 (142)
+|++++.+++..+.+++ +|.. .++..+ ..++...+.+. .+..+|+||--.. ....++.+.+.|++
T Consensus 198 ~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~~~i~~~--~~~g~D~vid~~g---~~~~~~~~~~~l~~ 265 (356)
T 1pl8_A 198 QVVVTDLSATRLSKAKE----IGAD---LVLQISKESPQEIARKVEGQ--LGCKPEVTIECTG---AEASIQAGIYATRS 265 (356)
T ss_dssp EEEEEESCHHHHHHHHH----TTCS---EEEECSSCCHHHHHHHHHHH--HTSCCSEEEECSC---CHHHHHHHHHHSCT
T ss_pred EEEEECCCHHHHHHHHH----hCCC---EEEcCcccccchHHHHHHHH--hCCCCCEEEECCC---ChHHHHHHHHHhcC
Confidence 37889999998887764 5653 222222 22333322110 1256999984332 24567888899999
Q ss_pred CeEEEEe
Q 032390 78 GGIAVYD 84 (142)
Q Consensus 78 gG~iv~d 84 (142)
+|.++.-
T Consensus 266 ~G~iv~~ 272 (356)
T 1pl8_A 266 GGTLVLV 272 (356)
T ss_dssp TCEEEEC
T ss_pred CCEEEEE
Confidence 9999864
No 366
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=89.53 E-value=3.7 Score=28.10 Aligned_cols=66 Identities=11% Similarity=0.083 Sum_probs=46.4
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHhc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMKL 74 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~~ 74 (142)
+|..+|-++...+..+..++..|+ .+. ...++.+.+..+. ..++|+|++|...+. -.++++.+.+.
T Consensus 9 ~ilivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~~~-----~~~~dlvllD~~l~~~~g~~~~~~l~~~ 76 (233)
T 1ys7_A 9 RVLVVDDDSDVLASLERGLRLSGF--EVA-TAVDGAEALRSAT-----ENRPDAIVLDINMPVLDGVSVVTALRAM 76 (233)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTC--EEE-EESSHHHHHHHHH-----HSCCSEEEEESSCSSSCHHHHHHHHHHT
T ss_pred eEEEEeCCHHHHHHHHHHHHhCCC--EEE-EECCHHHHHHHHH-----hCCCCEEEEeCCCCCCCHHHHHHHHHhc
Confidence 367899999999999999988765 344 5567777766653 357999999975432 34455555443
No 367
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=89.50 E-value=0.75 Score=34.68 Aligned_cols=71 Identities=15% Similarity=0.130 Sum_probs=44.6
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|++++.+++..+.+++ +|...-+.....+..+.+... ....+|+||--... ..++.+.+.|+++|.
T Consensus 190 ~Vi~~~~~~~~~~~~~~----~Ga~~~~~~~~~~~~~~~~~~-----~~~g~D~vid~~g~----~~~~~~~~~l~~~G~ 256 (362)
T 2c0c_A 190 HVIGTCSSDEKSAFLKS----LGCDRPINYKTEPVGTVLKQE-----YPEGVDVVYESVGG----AMFDLAVDALATKGR 256 (362)
T ss_dssp EEEEEESSHHHHHHHHH----TTCSEEEETTTSCHHHHHHHH-----CTTCEEEEEECSCT----HHHHHHHHHEEEEEE
T ss_pred EEEEEECCHHHHHHHHH----cCCcEEEecCChhHHHHHHHh-----cCCCCCEEEECCCH----HHHHHHHHHHhcCCE
Confidence 37889999888887765 454311111122333444433 13579999844332 467888899999999
Q ss_pred EEEe
Q 032390 81 AVYD 84 (142)
Q Consensus 81 iv~d 84 (142)
++.-
T Consensus 257 iv~~ 260 (362)
T 2c0c_A 257 LIVI 260 (362)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 8864
No 368
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=89.43 E-value=0.67 Score=34.78 Aligned_cols=71 Identities=17% Similarity=0.113 Sum_probs=45.2
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|++++.+++..+.+++ +|...-+.....+..+.+.... ...+|+||--... ..++.+.+.|+++|.
T Consensus 194 ~Vi~~~~~~~~~~~~~~----lGa~~~~~~~~~~~~~~~~~~~-----~~g~Dvvid~~g~----~~~~~~~~~l~~~G~ 260 (353)
T 4dup_A 194 EVYATAGSTGKCEACER----LGAKRGINYRSEDFAAVIKAET-----GQGVDIILDMIGA----AYFERNIASLAKDGC 260 (353)
T ss_dssp EEEEEESSHHHHHHHHH----HTCSEEEETTTSCHHHHHHHHH-----SSCEEEEEESCCG----GGHHHHHHTEEEEEE
T ss_pred EEEEEeCCHHHHHHHHh----cCCCEEEeCCchHHHHHHHHHh-----CCCceEEEECCCH----HHHHHHHHHhccCCE
Confidence 47889999998888875 4543222222233444444432 4579998854442 256778899999999
Q ss_pred EEEe
Q 032390 81 AVYD 84 (142)
Q Consensus 81 iv~d 84 (142)
++.-
T Consensus 261 iv~~ 264 (353)
T 4dup_A 261 LSII 264 (353)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 8764
No 369
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=89.18 E-value=2.6 Score=25.94 Aligned_cols=73 Identities=10% Similarity=0.083 Sum_probs=47.5
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhc--ccCCCceeEEEEcCCCcC--cHHHHHHHHhc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKY--SENEGSFDYAFVDADKDN--YCNYHERLMKL 74 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~--~~~~~~fD~IfiD~~~~~--~~~~~~~~~~~ 74 (142)
+|..+|-++...+..+..++..|....+. ...+..+.+..+... ......+|+|++|...+. -.++++.+.+.
T Consensus 4 ~ilivdd~~~~~~~l~~~L~~~~~~~~v~-~~~~~~~a~~~l~~~~~~~~~~~~dlvi~d~~~~~~~g~~~~~~l~~~ 80 (140)
T 1k68_A 4 KIFLVEDNKADIRLIQEALANSTVPHEVV-TVRDGMEAMAYLRQEGEYANASRPDLILLXLNLPKKDGREVLAEIKSD 80 (140)
T ss_dssp EEEEECCCHHHHHHHHHHHHTCSSCCEEE-EECSHHHHHHHHTTCGGGGSCCCCSEEEECSSCSSSCHHHHHHHHHHS
T ss_pred eEEEEeCCHHHHHHHHHHHHhcCCCceEE-EECCHHHHHHHHHcccccccCCCCcEEEEecCCCcccHHHHHHHHHcC
Confidence 36789999999999999999887642333 455666776666310 000157999999976432 34556666553
No 370
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=89.11 E-value=0.63 Score=29.16 Aligned_cols=65 Identities=2% Similarity=-0.135 Sum_probs=43.3
Q ss_pred CEEEEeCChhHHHHHHHHHHHcC-CCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHh
Q 032390 1 MITAIDVNRETYEIGLPIIKKAG-VDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMK 73 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~-~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~ 73 (142)
+|..+|-++...+..+..++..| + .+. ...++.+.+..+. ..++|+|++|...+. -.++++.+.+
T Consensus 16 ~ilivdd~~~~~~~l~~~L~~~g~~--~v~-~~~~~~~a~~~l~-----~~~~dlvi~D~~l~~~~g~~~~~~l~~ 83 (135)
T 3snk_A 16 QVALFSSDPNFKRDVATRLDALAIY--DVR-VSETDDFLKGPPA-----DTRPGIVILDLGGGDLLGKPGIVEARA 83 (135)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTSSE--EEE-EECGGGGGGCCCT-----TCCCSEEEEEEETTGGGGSTTHHHHHG
T ss_pred EEEEEcCCHHHHHHHHHHHhhcCCe--EEE-EeccHHHHHHHHh-----ccCCCEEEEeCCCCCchHHHHHHHHHh
Confidence 36789999999999999999886 4 344 4455655554442 467999999964332 2334455544
No 371
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=89.11 E-value=2.6 Score=25.76 Aligned_cols=65 Identities=9% Similarity=0.028 Sum_probs=45.4
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHh
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMK 73 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~ 73 (142)
+|..+|-++...+..+..++..|. .+. ...++.+.+..+. ..++|+|++|...+. -.++++.+.+
T Consensus 5 ~ilivdd~~~~~~~l~~~l~~~~~--~v~-~~~~~~~~~~~~~-----~~~~dlvi~D~~l~~~~g~~~~~~l~~ 71 (126)
T 1dbw_A 5 TVHIVDDEEPVRKSLAFMLTMNGF--AVK-MHQSAEAFLAFAP-----DVRNGVLVTDLRMPDMSGVELLRNLGD 71 (126)
T ss_dssp EEEEEESSHHHHHHHHHHHHHTTC--EEE-EESCHHHHHHHGG-----GCCSEEEEEECCSTTSCHHHHHHHHHH
T ss_pred EEEEEcCCHHHHHHHHHHHHhCCc--EEE-EeCCHHHHHHHHh-----cCCCCEEEEECCCCCCCHHHHHHHHHh
Confidence 367889999999999999988765 344 4567777766553 457999999975432 2445555544
No 372
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=89.01 E-value=4 Score=27.77 Aligned_cols=66 Identities=11% Similarity=0.099 Sum_probs=46.1
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHhc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMKL 74 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~~ 74 (142)
+|..+|-++...+..+..++..|. .+. ...++.+.+..+. ..++|+|++|...+. -.++++.+.+.
T Consensus 4 ~ilivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~~~-----~~~~dlvllD~~l~~~~g~~~~~~lr~~ 71 (225)
T 1kgs_A 4 RVLVVEDERDLADLITEALKKEMF--TVD-VCYDGEEGMYMAL-----NEPFDVVILDIMLPVHDGWEILKSMRES 71 (225)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTTC--EEE-EESSHHHHHHHHH-----HSCCSEEEEESCCSSSCHHHHHHHHHHT
T ss_pred eEEEEeCCHHHHHHHHHHHHHCCC--EEE-EECCHHHHHHHHh-----cCCCCEEEEeCCCCCCCHHHHHHHHHhc
Confidence 367899999999999999988765 344 5567777666553 357999999975443 34455555543
No 373
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=88.90 E-value=2.9 Score=26.10 Aligned_cols=74 Identities=11% Similarity=0.239 Sum_probs=48.6
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHhcccCC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMKLLKVG 78 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~~L~~g 78 (142)
+|..+|-++...+..+..++..|+ .+. ...++.+.+..+. ...+|+|++|...+. -.++++.+...- .-
T Consensus 6 ~Ilivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~al~~~~-----~~~~dlvllD~~l~~~~g~~l~~~l~~~~-~~ 76 (136)
T 2qzj_A 6 KILIIDGDKDNCQKLKGFLEEKGI--SID-LAYNCEEAIGKIF-----SNKYDLIFLEIILSDGDGWTLCKKIRNVT-TC 76 (136)
T ss_dssp EEEEECSCHHHHHHHHHHHHTTTC--EEE-EESSHHHHHHHHH-----HCCCSEEEEESEETTEEHHHHHHHHHTTC-CC
T ss_pred eEEEEcCCHHHHHHHHHHHHHCCC--EEE-EECCHHHHHHHHH-----hcCCCEEEEeCCCCCCCHHHHHHHHccCC-CC
Confidence 367889999999999999987765 353 5567777766553 357999999975432 244555555432 33
Q ss_pred eEEEE
Q 032390 79 GIAVY 83 (142)
Q Consensus 79 G~iv~ 83 (142)
.+|++
T Consensus 77 ~ii~l 81 (136)
T 2qzj_A 77 PIVYM 81 (136)
T ss_dssp CEEEE
T ss_pred CEEEE
Confidence 34444
No 374
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=88.83 E-value=0.69 Score=34.29 Aligned_cols=72 Identities=15% Similarity=0.236 Sum_probs=44.2
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|++++.+++..+.+++ +|...-+.....+..+.+.... ....+|++|--+.. ..++.+.+.|+++|.
T Consensus 172 ~Vi~~~~~~~~~~~~~~----~g~~~~~d~~~~~~~~~i~~~~----~~~~~d~vi~~~g~----~~~~~~~~~l~~~G~ 239 (333)
T 1wly_A 172 TVIGTVSTEEKAETARK----LGCHHTINYSTQDFAEVVREIT----GGKGVDVVYDSIGK----DTLQKSLDCLRPRGM 239 (333)
T ss_dssp EEEEEESSHHHHHHHHH----HTCSEEEETTTSCHHHHHHHHH----TTCCEEEEEECSCT----TTHHHHHHTEEEEEE
T ss_pred EEEEEeCCHHHHHHHHH----cCCCEEEECCCHHHHHHHHHHh----CCCCCeEEEECCcH----HHHHHHHHhhccCCE
Confidence 37889999988887765 3432112211223333333332 13469999854432 457788899999999
Q ss_pred EEEe
Q 032390 81 AVYD 84 (142)
Q Consensus 81 iv~d 84 (142)
++.-
T Consensus 240 iv~~ 243 (333)
T 1wly_A 240 CAAY 243 (333)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 8764
No 375
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=88.80 E-value=1.1 Score=33.37 Aligned_cols=73 Identities=12% Similarity=0.150 Sum_probs=47.4
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|++++.+++..+.+++ +|...-+. ...+..+.+..+. ....+|+||--.. -...++.+.+.|+++|.
T Consensus 198 ~Vi~~~~~~~~~~~~~~----lGa~~~i~-~~~~~~~~v~~~t----~g~g~d~v~d~~G---~~~~~~~~~~~l~~~G~ 265 (345)
T 3jv7_A 198 RVIAVDLDDDRLALARE----VGADAAVK-SGAGAADAIRELT----GGQGATAVFDFVG---AQSTIDTAQQVVAVDGH 265 (345)
T ss_dssp EEEEEESCHHHHHHHHH----TTCSEEEE-CSTTHHHHHHHHH----GGGCEEEEEESSC---CHHHHHHHHHHEEEEEE
T ss_pred EEEEEcCCHHHHHHHHH----cCCCEEEc-CCCcHHHHHHHHh----CCCCCeEEEECCC---CHHHHHHHHHHHhcCCE
Confidence 47899999999888764 56542222 1223444444442 1347999984332 35578889999999999
Q ss_pred EEEec
Q 032390 81 AVYDN 85 (142)
Q Consensus 81 iv~dn 85 (142)
++.-.
T Consensus 266 iv~~G 270 (345)
T 3jv7_A 266 ISVVG 270 (345)
T ss_dssp EEECS
T ss_pred EEEEC
Confidence 98743
No 376
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=88.79 E-value=2.9 Score=25.91 Aligned_cols=74 Identities=11% Similarity=0.029 Sum_probs=47.4
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHhcccCCe
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMKLLKVGG 79 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~~L~~gG 79 (142)
|..+|-++...+..+..++..+.- .+-....++.+.+..+. ..++|+|++|...+. -.++++.+.+. .|+.
T Consensus 6 Ilivdd~~~~~~~l~~~l~~~~~~-~~v~~~~~~~~al~~~~-----~~~~dlvilD~~lp~~~g~~~~~~l~~~-~~~~ 78 (133)
T 3b2n_A 6 LIIAEDQNMLRQAMVQLIKLHGDF-EILADTDNGLDAMKLIE-----EYNPNVVILDIEMPGMTGLEVLAEIRKK-HLNI 78 (133)
T ss_dssp EEEECSCHHHHHHHHHHHHHHSSE-EEEEEESCHHHHHHHHH-----HHCCSEEEECSSCSSSCHHHHHHHHHHT-TCSC
T ss_pred EEEECCCHHHHHHHHHHHhhCCCc-EEEEEcCCHHHHHHHHh-----hcCCCEEEEecCCCCCCHHHHHHHHHHH-CCCC
Confidence 677899999999999999876521 22334556667666553 346999999975443 24556666553 3444
Q ss_pred EEE
Q 032390 80 IAV 82 (142)
Q Consensus 80 ~iv 82 (142)
.++
T Consensus 79 ~ii 81 (133)
T 3b2n_A 79 KVI 81 (133)
T ss_dssp EEE
T ss_pred cEE
Confidence 443
No 377
>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A
Probab=88.77 E-value=3.9 Score=27.45 Aligned_cols=65 Identities=14% Similarity=0.138 Sum_probs=45.8
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHhc
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMKL 74 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~~ 74 (142)
|..+|-++...+..+..++..|+ .+. ...++.+.+..+. ..++|+|++|...+. -.++++.+.+.
T Consensus 7 ilivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~al~~~~-----~~~~dlvl~D~~lp~~~g~~~~~~l~~~ 73 (208)
T 1yio_A 7 VFVVDDDMSVREGLRNLLRSAGF--EVE-TFDCASTFLEHRR-----PEQHGCLVLDMRMPGMSGIELQEQLTAI 73 (208)
T ss_dssp EEEECSCHHHHHHHHHHHHTTTC--EEE-EESSHHHHHHHCC-----TTSCEEEEEESCCSSSCHHHHHHHHHHT
T ss_pred EEEEcCCHHHHHHHHHHHHhCCc--eEE-EcCCHHHHHHhhh-----ccCCCEEEEeCCCCCCCHHHHHHHHHhc
Confidence 67889999999999999988765 344 4567777766552 467999999975443 34455555543
No 378
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=88.76 E-value=0.77 Score=34.49 Aligned_cols=70 Identities=9% Similarity=0.031 Sum_probs=47.6
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC-----------------c
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN-----------------Y 64 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~-----------------~ 64 (142)
|.++|+++.+++..+.|+.... ++|+.++.... -..+|+|+.++++.. +
T Consensus 36 v~~~e~d~~a~~t~~~N~~~~~--------~~Di~~~~~~~------~~~~D~l~~gpPCQ~fS~ag~~~g~~d~r~~L~ 101 (327)
T 2c7p_A 36 VYSNEWDKYAQEVYEMNFGEKP--------EGDITQVNEKT------IPDHDILCAGFPCQAFSISGKQKGFEDSRGTLF 101 (327)
T ss_dssp EEEECCCHHHHHHHHHHHSCCC--------BSCGGGSCGGG------SCCCSEEEEECCCTTTCTTSCCCGGGSTTSCHH
T ss_pred EEEEeCCHHHHHHHHHHcCCCC--------cCCHHHcCHhh------CCCCCEEEECCCCCCcchhcccCCCcchhhHHH
Confidence 6789999999999999984321 58887754321 246999999876321 2
Q ss_pred HHHHHHHHhcccCCeEEEEeccc
Q 032390 65 CNYHERLMKLLKVGGIAVYDNTL 87 (142)
Q Consensus 65 ~~~~~~~~~~L~~gG~iv~dn~~ 87 (142)
.++++. .+.++|. +++++|+-
T Consensus 102 ~~~~r~-i~~~~P~-~~~~ENV~ 122 (327)
T 2c7p_A 102 FDIARI-VREKKPK-VVFMENVK 122 (327)
T ss_dssp HHHHHH-HHHHCCS-EEEEEEEG
T ss_pred HHHHHH-HHhccCc-EEEEeCcH
Confidence 334443 3456886 77888885
No 379
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=88.73 E-value=3 Score=26.00 Aligned_cols=72 Identities=17% Similarity=0.115 Sum_probs=47.1
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcc-cCCCceeEEEEcCCCcC--cHHHHHHHHh
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYS-ENEGSFDYAFVDADKDN--YCNYHERLMK 73 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~-~~~~~fD~IfiD~~~~~--~~~~~~~~~~ 73 (142)
+|..+|-++...+..+..++..|....+. ...+..+.+..+.... .....+|+|++|...+. -.++++.+.+
T Consensus 9 ~ILivdd~~~~~~~l~~~L~~~g~~~~v~-~~~~~~~a~~~l~~~~~~~~~~~dlii~D~~l~~~~g~~~~~~l~~ 83 (143)
T 2qvg_A 9 DILYLEDDEVDIQSVERVFHKISSLIKIE-IAKSGNQALDMLYGRNKENKIHPKLILLDINIPKMNGIEFLKELRD 83 (143)
T ss_dssp SEEEECCCHHHHHHHHHHHHHHCTTCCEE-EESSHHHHHHHHHTCTTCCCCCCSEEEEETTCTTSCHHHHHHHHTT
T ss_pred eEEEEeCCHHHHHHHHHHHHHhCCCceEE-EECCHHHHHHHHHhcccccCCCCCEEEEecCCCCCCHHHHHHHHHc
Confidence 47789999999999999999988643344 4566667666653100 00157999999975432 3445555544
No 380
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=88.72 E-value=2.5 Score=25.05 Aligned_cols=66 Identities=15% Similarity=0.056 Sum_probs=45.7
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHhc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMKL 74 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~~ 74 (142)
+|..+|-++...+..+..++..|. ++. ...+..+.+..+. ..++|+|++|...+. ..++++.+.+.
T Consensus 3 ~iliv~~~~~~~~~l~~~l~~~g~--~v~-~~~~~~~~~~~l~-----~~~~dlii~d~~~~~~~~~~~~~~l~~~ 70 (119)
T 2j48_A 3 HILLLEEEDEAATVVCEMLTAAGF--KVI-WLVDGSTALDQLD-----LLQPIVILMAWPPPDQSCLLLLQHLREH 70 (119)
T ss_dssp EEEEECCCHHHHHHHHHHHHHTTC--EEE-EESCHHHHHHHHH-----HHCCSEEEEECSTTCCTHHHHHHHHHHT
T ss_pred EEEEEeCCHHHHHHHHHHHHhCCc--EEE-EecCHHHHHHHHH-----hcCCCEEEEecCCCCCCHHHHHHHHHhc
Confidence 367889999999999999998776 354 3556666666553 347999999975432 34455555543
No 381
>3kyj_B CHEY6 protein, putative histidine protein kinase; protein-protein interaction, histidine kinase, response regulator, phosphorylation; 1.40A {Rhodobacter sphaeroides} PDB: 3kyi_B*
Probab=88.63 E-value=1.2 Score=28.17 Aligned_cols=67 Identities=13% Similarity=0.091 Sum_probs=44.4
Q ss_pred CEEEEeCChhHHHHHHHHHHHc-CCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHh
Q 032390 1 MITAIDVNRETYEIGLPIIKKA-GVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMK 73 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~-~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~ 73 (142)
+|..+|-++......+..++.. |. .+-....++.+.+..+.. ...+|+|++|...+. -.++++.+..
T Consensus 15 ~vlivdd~~~~~~~l~~~L~~~~~~--~~v~~~~~~~~al~~l~~----~~~~dlvilD~~l~~~~g~~~~~~lr~ 84 (145)
T 3kyj_B 15 NVMIVDDAAMMRLYIASFIKTLPDF--KVVAQAANGQEALDKLAA----QPNVDLILLDIEMPVMDGMEFLRHAKL 84 (145)
T ss_dssp EEEEECSCHHHHHHHHHHHTTCTTE--EEEEEESSHHHHHHHHHH----CTTCCEEEECTTSCCCTTCHHHHHHHH
T ss_pred eEEEEcCCHHHHHHHHHHHHhCCCc--eEEEEECCHHHHHHHHhc----CCCCCEEEEeCCCCCCCHHHHHHHHHh
Confidence 3678999999999999988775 32 222356777777766642 227999999975432 2345555543
No 382
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=88.59 E-value=1.2 Score=28.34 Aligned_cols=63 Identities=22% Similarity=0.238 Sum_probs=42.7
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHH
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLM 72 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~ 72 (142)
|..+|-++...+..+..++..|. .+. ...++.+.+..+. ..++|+|++|...+. -.++++.+.
T Consensus 17 iLivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~al~~~~-----~~~~dlvl~D~~mp~~~g~~~~~~lr 81 (143)
T 3m6m_D 17 MLVADDHEANRMVLQRLLEKAGH--KVL-CVNGAEQVLDAMA-----EEDYDAVIVDLHMPGMNGLDMLKQLR 81 (143)
T ss_dssp EEEECSSHHHHHHHHHHHHC--C--EEE-EESSHHHHHHHHH-----HSCCSEEEEESCCSSSCHHHHHHHHH
T ss_pred EEEEeCCHHHHHHHHHHHHHcCC--eEE-EeCCHHHHHHHHh-----cCCCCEEEEeCCCCCCCHHHHHHHHH
Confidence 67789999999999999988765 343 3566767666553 357999999975443 344555554
No 383
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=88.56 E-value=3.1 Score=25.97 Aligned_cols=71 Identities=13% Similarity=0.048 Sum_probs=46.3
Q ss_pred CEEEEeCChhHHHHHHHHHHHc-CCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHhcccC
Q 032390 1 MITAIDVNRETYEIGLPIIKKA-GVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMKLLKV 77 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~-~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~~L~~ 77 (142)
+|..+|-++...+..+..++.. ++ .+-....++.+.+..+. ...+|+|++|...+. -.++++.+.+ ..+
T Consensus 11 ~iLivdd~~~~~~~l~~~L~~~~~~--~~v~~~~~~~~al~~l~-----~~~~dlvi~d~~l~~~~g~~~~~~l~~-~~~ 82 (143)
T 2qv0_A 11 KVIIVEDEFLAQQELSWLINTHSQM--EIVGSFDDGLDVLKFLQ-----HNKVDAIFLDINIPSLDGVLLAQNISQ-FAH 82 (143)
T ss_dssp EEEEECSCHHHHHHHHHHHHHHSCC--EEEEEESCHHHHHHHHH-----HCCCSEEEECSSCSSSCHHHHHHHHTT-STT
T ss_pred EEEEEcCCHHHHHHHHHHHHhCCCc--eEEEEeCCHHHHHHHHH-----hCCCCEEEEecCCCCCCHHHHHHHHHc-cCC
Confidence 3678999999999999999876 32 22224567777666553 356999999975432 3445555544 334
Q ss_pred Ce
Q 032390 78 GG 79 (142)
Q Consensus 78 gG 79 (142)
..
T Consensus 83 ~~ 84 (143)
T 2qv0_A 83 KP 84 (143)
T ss_dssp CC
T ss_pred Cc
Confidence 44
No 384
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=88.46 E-value=0.99 Score=33.39 Aligned_cols=71 Identities=13% Similarity=0.140 Sum_probs=44.5
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEE-ccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCe
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIE-SEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGG 79 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~-~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG 79 (142)
+|++++.+++..+.+++ +|....++... .+..+.+.... .+.+|+++-.+.. ..++.+.+.|++||
T Consensus 172 ~V~~~~~~~~~~~~~~~----~g~~~~~d~~~~~~~~~~~~~~~-----~~~~d~vi~~~g~----~~~~~~~~~l~~~G 238 (333)
T 1v3u_A 172 KVVGAAGSDEKIAYLKQ----IGFDAAFNYKTVNSLEEALKKAS-----PDGYDCYFDNVGG----EFLNTVLSQMKDFG 238 (333)
T ss_dssp EEEEEESSHHHHHHHHH----TTCSEEEETTSCSCHHHHHHHHC-----TTCEEEEEESSCH----HHHHHHHTTEEEEE
T ss_pred EEEEEeCCHHHHHHHHh----cCCcEEEecCCHHHHHHHHHHHh-----CCCCeEEEECCCh----HHHHHHHHHHhcCC
Confidence 37888999888877743 35422122212 34444444431 3579999865542 35788889999999
Q ss_pred EEEEe
Q 032390 80 IAVYD 84 (142)
Q Consensus 80 ~iv~d 84 (142)
.++.-
T Consensus 239 ~~v~~ 243 (333)
T 1v3u_A 239 KIAIC 243 (333)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 98763
No 385
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=88.42 E-value=1.2 Score=33.26 Aligned_cols=72 Identities=15% Similarity=0.111 Sum_probs=45.5
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEE-EccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCe
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFI-ESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGG 79 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~-~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG 79 (142)
+|++++.+++..+.+++ +|...-++.. ..+..+.+.... .+.+|+|+--.. ....++.+.+.|+++|
T Consensus 196 ~V~~~~~~~~~~~~~~~----~g~~~~~d~~~~~~~~~~~~~~~-----~~~~D~vi~~~g---~~~~~~~~~~~l~~~G 263 (347)
T 2hcy_A 196 RVLGIDGGEGKEELFRS----IGGEVFIDFTKEKDIVGAVLKAT-----DGGAHGVINVSV---SEAAIEASTRYVRANG 263 (347)
T ss_dssp EEEEEECSTTHHHHHHH----TTCCEEEETTTCSCHHHHHHHHH-----TSCEEEEEECSS---CHHHHHHHTTSEEEEE
T ss_pred cEEEEcCCHHHHHHHHH----cCCceEEecCccHhHHHHHHHHh-----CCCCCEEEECCC---cHHHHHHHHHHHhcCC
Confidence 37888999888877654 4543112211 133444444442 237999986543 3457888899999999
Q ss_pred EEEEe
Q 032390 80 IAVYD 84 (142)
Q Consensus 80 ~iv~d 84 (142)
.++.-
T Consensus 264 ~iv~~ 268 (347)
T 2hcy_A 264 TTVLV 268 (347)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 98763
No 386
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=88.40 E-value=0.89 Score=33.83 Aligned_cols=73 Identities=18% Similarity=0.057 Sum_probs=44.1
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|++++.+++..+.+++ +|...-+.....+..+.+..+. ....+|+||--... .. .....+.|+++|.
T Consensus 171 ~Vi~~~~~~~~~~~~~~----lga~~~~~~~~~~~~~~~~~~~----~~~g~Dvvid~~g~---~~-~~~~~~~l~~~G~ 238 (340)
T 3gms_A 171 RLIAVTRNNKHTEELLR----LGAAYVIDTSTAPLYETVMELT----NGIGADAAIDSIGG---PD-GNELAFSLRPNGH 238 (340)
T ss_dssp EEEEEESSSTTHHHHHH----HTCSEEEETTTSCHHHHHHHHT----TTSCEEEEEESSCH---HH-HHHHHHTEEEEEE
T ss_pred EEEEEeCCHHHHHHHHh----CCCcEEEeCCcccHHHHHHHHh----CCCCCcEEEECCCC---hh-HHHHHHHhcCCCE
Confidence 47889999998888875 4543222222234444444442 23479999854432 22 3344589999999
Q ss_pred EEEec
Q 032390 81 AVYDN 85 (142)
Q Consensus 81 iv~dn 85 (142)
++.-.
T Consensus 239 iv~~G 243 (340)
T 3gms_A 239 FLTIG 243 (340)
T ss_dssp EEECC
T ss_pred EEEEe
Confidence 98743
No 387
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=88.29 E-value=3.1 Score=25.66 Aligned_cols=66 Identities=12% Similarity=0.076 Sum_probs=45.0
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHhc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMKL 74 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~~ 74 (142)
+|..+|-++...+..+..+...|. .+. ...++.+.+..+. ...+|+|++|...+. -.++++.+.+.
T Consensus 5 ~ilivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~~~-----~~~~dlvl~D~~l~~~~g~~~~~~l~~~ 72 (136)
T 1mvo_A 5 KILVVDDEESIVTLLQYNLERSGY--DVI-TASDGEEALKKAE-----TEKPDLIVLDVMLPKLDGIEVCKQLRQQ 72 (136)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTC--EEE-EESSHHHHHHHHH-----HHCCSEEEEESSCSSSCHHHHHHHHHHT
T ss_pred EEEEEECCHHHHHHHHHHHHHCCc--EEE-EecCHHHHHHHHh-----hcCCCEEEEecCCCCCCHHHHHHHHHcC
Confidence 367789999999999999988765 343 4566666665553 346999999976443 24455555543
No 388
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=88.28 E-value=1.3 Score=33.39 Aligned_cols=71 Identities=14% Similarity=0.076 Sum_probs=44.8
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|++++.+++..+.+++ +|.. .+--...+..+.+..+ ..+.+|+||--.. -...++.+.+.|+++|.
T Consensus 199 ~Vi~~~~~~~~~~~~~~----lGad-~vi~~~~~~~~~v~~~-----~~~g~Dvvid~~g---~~~~~~~~~~~l~~~G~ 265 (363)
T 4dvj_A 199 TVIATASRPETQEWVKS----LGAH-HVIDHSKPLAAEVAAL-----GLGAPAFVFSTTH---TDKHAAEIADLIAPQGR 265 (363)
T ss_dssp EEEEECSSHHHHHHHHH----TTCS-EEECTTSCHHHHHHTT-----CSCCEEEEEECSC---HHHHHHHHHHHSCTTCE
T ss_pred EEEEEeCCHHHHHHHHH----cCCC-EEEeCCCCHHHHHHHh-----cCCCceEEEECCC---chhhHHHHHHHhcCCCE
Confidence 47889999998888764 5643 2211112333333332 2457998884332 34567888999999999
Q ss_pred EEEe
Q 032390 81 AVYD 84 (142)
Q Consensus 81 iv~d 84 (142)
++.-
T Consensus 266 iv~~ 269 (363)
T 4dvj_A 266 FCLI 269 (363)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 9863
No 389
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=88.22 E-value=0.71 Score=34.09 Aligned_cols=72 Identities=17% Similarity=0.180 Sum_probs=44.0
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|++++.+++..+.+++ +|...-+.....+..+.+.... ....+|++|-.+. ...++.+.+.|+++|.
T Consensus 167 ~V~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~----~~~~~D~vi~~~g----~~~~~~~~~~l~~~G~ 234 (327)
T 1qor_A 167 KLIGTVGTAQKAQSALK----AGAWQVINYREEDLVERLKEIT----GGKKVRVVYDSVG----RDTWERSLDCLQRRGL 234 (327)
T ss_dssp EEEEEESSHHHHHHHHH----HTCSEEEETTTSCHHHHHHHHT----TTCCEEEEEECSC----GGGHHHHHHTEEEEEE
T ss_pred EEEEEeCCHHHHHHHHH----cCCCEEEECCCccHHHHHHHHh----CCCCceEEEECCc----hHHHHHHHHHhcCCCE
Confidence 37889999988887765 3432111111123333333331 1346999986554 3457788899999999
Q ss_pred EEEe
Q 032390 81 AVYD 84 (142)
Q Consensus 81 iv~d 84 (142)
++.-
T Consensus 235 iv~~ 238 (327)
T 1qor_A 235 MVSF 238 (327)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 8764
No 390
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=88.07 E-value=2.5 Score=26.55 Aligned_cols=74 Identities=15% Similarity=0.141 Sum_probs=46.3
Q ss_pred CEEEEeCChhHHHHHHHHHHHcC-CCCcEEEEEccHHHHHHHHhhcccCC-CceeEEEEcCCCcCc--HHHHHHHHhccc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAG-VDHKINFIESEALSVLDQLLKYSENE-GSFDYAFVDADKDNY--CNYHERLMKLLK 76 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~-~~~~v~~~~~da~~~l~~~~~~~~~~-~~fD~IfiD~~~~~~--~~~~~~~~~~L~ 76 (142)
+|..+|-++...+..+..++..| + .+.. ..+..+.+..+.. . ..+|+|++|...+.. .++++.+... .
T Consensus 22 ~ilivdd~~~~~~~l~~~L~~~g~~--~v~~-~~~~~~~~~~~~~----~~~~~dlvi~D~~l~~~~g~~~~~~l~~~-~ 93 (146)
T 4dad_A 22 NILVASEDASRLAHLARLVGDAGRY--RVTR-TVGRAAQIVQRTD----GLDAFDILMIDGAALDTAELAAIEKLSRL-H 93 (146)
T ss_dssp EEEEECSCHHHHHHHHHHHHHHCSC--EEEE-ECCCHHHHTTCHH----HHTTCSEEEEECTTCCHHHHHHHHHHHHH-C
T ss_pred eEEEEeCCHHHHHHHHHHHhhCCCe--EEEE-eCCHHHHHHHHHh----cCCCCCEEEEeCCCCCccHHHHHHHHHHh-C
Confidence 46789999999999999999987 4 3443 4445544443321 2 689999999865432 3345555443 2
Q ss_pred CCeEEE
Q 032390 77 VGGIAV 82 (142)
Q Consensus 77 ~gG~iv 82 (142)
++..++
T Consensus 94 ~~~~ii 99 (146)
T 4dad_A 94 PGLTCL 99 (146)
T ss_dssp TTCEEE
T ss_pred CCCcEE
Confidence 443333
No 391
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=88.01 E-value=1.1 Score=33.33 Aligned_cols=72 Identities=10% Similarity=0.040 Sum_probs=44.8
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|++++.+++..+.+++ +|...-+... .+..+.+.... ....+|+||--... ..++.+.+.|+++|.
T Consensus 186 ~Vi~~~~~~~~~~~~~~----~ga~~v~~~~-~~~~~~v~~~~----~~~g~Dvvid~~g~----~~~~~~~~~l~~~G~ 252 (342)
T 4eye_A 186 KVIAVVNRTAATEFVKS----VGADIVLPLE-EGWAKAVREAT----GGAGVDMVVDPIGG----PAFDDAVRTLASEGR 252 (342)
T ss_dssp EEEEEESSGGGHHHHHH----HTCSEEEESS-TTHHHHHHHHT----TTSCEEEEEESCC------CHHHHHHTEEEEEE
T ss_pred EEEEEeCCHHHHHHHHh----cCCcEEecCc-hhHHHHHHHHh----CCCCceEEEECCch----hHHHHHHHhhcCCCE
Confidence 47889999998888775 3543212222 34444444432 23479999854432 246778899999999
Q ss_pred EEEec
Q 032390 81 AVYDN 85 (142)
Q Consensus 81 iv~dn 85 (142)
++.-.
T Consensus 253 iv~~G 257 (342)
T 4eye_A 253 LLVVG 257 (342)
T ss_dssp EEEC-
T ss_pred EEEEE
Confidence 98643
No 392
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=87.90 E-value=1.4 Score=32.94 Aligned_cols=70 Identities=19% Similarity=0.200 Sum_probs=45.0
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|++++.+++..+.+++ +|.. .+--...+..+.+..+ ....+|+||--.. -...++.+.+.|+++|.
T Consensus 177 ~Vi~~~~~~~~~~~~~~----lGa~-~vi~~~~~~~~~~~~~-----~~~g~Dvv~d~~g---~~~~~~~~~~~l~~~G~ 243 (346)
T 3fbg_A 177 RVITTASRNETIEWTKK----MGAD-IVLNHKESLLNQFKTQ-----GIELVDYVFCTFN---TDMYYDDMIQLVKPRGH 243 (346)
T ss_dssp EEEEECCSHHHHHHHHH----HTCS-EEECTTSCHHHHHHHH-----TCCCEEEEEESSC---HHHHHHHHHHHEEEEEE
T ss_pred EEEEEeCCHHHHHHHHh----cCCc-EEEECCccHHHHHHHh-----CCCCccEEEECCC---chHHHHHHHHHhccCCE
Confidence 47889999998888876 4543 2211112333444443 1457999884332 35567888999999999
Q ss_pred EEE
Q 032390 81 AVY 83 (142)
Q Consensus 81 iv~ 83 (142)
++.
T Consensus 244 iv~ 246 (346)
T 3fbg_A 244 IAT 246 (346)
T ss_dssp EEE
T ss_pred EEE
Confidence 975
No 393
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=87.89 E-value=1.1 Score=33.38 Aligned_cols=73 Identities=12% Similarity=0.067 Sum_probs=45.4
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|++++.+++..+.+++ +|...-+.....+..+.+..+. ....+|+||--.. ....++.+.+.|+++|.
T Consensus 194 ~Vi~~~~~~~~~~~~~~----~Ga~~~~~~~~~~~~~~v~~~~----~g~g~D~vid~~g---~~~~~~~~~~~l~~~G~ 262 (348)
T 2d8a_A 194 PVIVSEPSDFRRELAKK----VGADYVINPFEEDVVKEVMDIT----DGNGVDVFLEFSG---APKALEQGLQAVTPAGR 262 (348)
T ss_dssp SEEEECSCHHHHHHHHH----HTCSEEECTTTSCHHHHHHHHT----TTSCEEEEEECSC---CHHHHHHHHHHEEEEEE
T ss_pred EEEEECCCHHHHHHHHH----hCCCEEECCCCcCHHHHHHHHc----CCCCCCEEEECCC---CHHHHHHHHHHHhcCCE
Confidence 47889999998887764 4542111111123444444432 1346999984433 34567888899999999
Q ss_pred EEEe
Q 032390 81 AVYD 84 (142)
Q Consensus 81 iv~d 84 (142)
++.-
T Consensus 263 iv~~ 266 (348)
T 2d8a_A 263 VSLL 266 (348)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 8863
No 394
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=87.85 E-value=1.4 Score=33.28 Aligned_cols=71 Identities=20% Similarity=0.299 Sum_probs=45.2
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEE--ccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCC-
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIE--SEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVG- 78 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~--~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~g- 78 (142)
|++++.+++..+.+++ +|...-++... .+..+.+..+. .+.+|+||--.. ....++.+.+.|+++
T Consensus 220 Vi~~~~~~~~~~~~~~----lGa~~vi~~~~~~~~~~~~~~~~~-----~~g~D~vid~~g---~~~~~~~~~~~l~~~~ 287 (374)
T 1cdo_A 220 IIAVDLNPDKFEKAKV----FGATDFVNPNDHSEPISQVLSKMT-----NGGVDFSLECVG---NVGVMRNALESCLKGW 287 (374)
T ss_dssp EEEECSCGGGHHHHHH----TTCCEEECGGGCSSCHHHHHHHHH-----TSCBSEEEECSC---CHHHHHHHHHTBCTTT
T ss_pred EEEEcCCHHHHHHHHH----hCCceEEeccccchhHHHHHHHHh-----CCCCCEEEECCC---CHHHHHHHHHHhhcCC
Confidence 7889999999988764 46532111111 23444444442 347999984332 245688889999999
Q ss_pred eEEEEe
Q 032390 79 GIAVYD 84 (142)
Q Consensus 79 G~iv~d 84 (142)
|.++.-
T Consensus 288 G~iv~~ 293 (374)
T 1cdo_A 288 GVSVLV 293 (374)
T ss_dssp CEEEEC
T ss_pred cEEEEE
Confidence 998764
No 395
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=87.81 E-value=3.1 Score=25.04 Aligned_cols=75 Identities=19% Similarity=-0.009 Sum_probs=47.9
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHhcccCC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMKLLKVG 78 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~~L~~g 78 (142)
+|..+|-++......+..++..|. .+. ...++.+.+..+. ...+|+|++|...+. -.++++.+.+.-..-
T Consensus 2 ~ilivdd~~~~~~~l~~~l~~~g~--~v~-~~~~~~~a~~~~~-----~~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~ 73 (121)
T 2pl1_A 2 RVLVVEDNALLRHHLKVQIQDAGH--QVD-DAEDAKEADYYLN-----EHIPDIAIVDLGLPDEDGLSLIRRWRSNDVSL 73 (121)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTC--EEE-EESSHHHHHHHHH-----HSCCSEEEECSCCSSSCHHHHHHHHHHTTCCS
T ss_pred eEEEEeCcHHHHHHHHHHHhhcCC--EEE-EeCCHHHHHHHHh-----ccCCCEEEEecCCCCCCHHHHHHHHHhcCCCC
Confidence 367789999999999999988775 343 4556666665553 357999999975443 234555555432223
Q ss_pred eEEEE
Q 032390 79 GIAVY 83 (142)
Q Consensus 79 G~iv~ 83 (142)
.++++
T Consensus 74 ~ii~~ 78 (121)
T 2pl1_A 74 PILVL 78 (121)
T ss_dssp CEEEE
T ss_pred CEEEE
Confidence 34443
No 396
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=87.69 E-value=2.8 Score=29.57 Aligned_cols=64 Identities=19% Similarity=0.173 Sum_probs=44.6
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCc--HHHHHHHHh
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNY--CNYHERLMK 73 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~--~~~~~~~~~ 73 (142)
|..+|-++...+..+..++..|. .+ ....++.+.+..+. ..++|+|++|...+.. .++++.+.+
T Consensus 40 ILivdd~~~~~~~l~~~L~~~g~--~v-~~~~~~~~al~~~~-----~~~~DlvllD~~lp~~~G~~l~~~lr~ 105 (249)
T 3q9s_A 40 ILVIEDDHDIANVLRMDLTDAGY--VV-DHADSAMNGLIKAR-----EDHPDLILLDLGLPDFDGGDVVQRLRK 105 (249)
T ss_dssp EEEECSCHHHHHHHHHHHHTTTC--EE-EEESSHHHHHHHHH-----HSCCSEEEEECCSCHHHHHHHHHHHHT
T ss_pred EEEEECCHHHHHHHHHHHHHCCC--EE-EEeCCHHHHHHHHh-----cCCCCEEEEcCCCCCCCHHHHHHHHHc
Confidence 67899999999999999988764 23 35567777766653 3579999999865432 334444444
No 397
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=87.67 E-value=3.1 Score=24.93 Aligned_cols=65 Identities=15% Similarity=0.087 Sum_probs=44.4
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHh
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMK 73 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~ 73 (142)
+|..+|-++...+..+..++..|. .+. ...++.+.+..+. ..++|+|++|...+. -.++++.+.+
T Consensus 3 ~ilivdd~~~~~~~l~~~l~~~~~--~v~-~~~~~~~a~~~~~-----~~~~dlvl~D~~l~~~~g~~~~~~l~~ 69 (120)
T 2a9o_A 3 KILIVDDEKPISDIIKFNMTKEGY--EVV-TAFNGREALEQFE-----AEQPDIIILDLMLPEIDGLEVAKTIRK 69 (120)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTC--EEE-EESSHHHHHHHHH-----HHCCSEEEECSSCSSSCHHHHHHHHHH
T ss_pred eEEEEcCCHHHHHHHHHHHHhcCc--EEE-EecCHHHHHHHHH-----hCCCCEEEEeccCCCCCHHHHHHHHHh
Confidence 367789999999999999988765 343 4556666665553 346999999975432 2345555544
No 398
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=87.64 E-value=0.7 Score=35.07 Aligned_cols=70 Identities=13% Similarity=0.129 Sum_probs=43.7
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEc------cHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIES------EALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKL 74 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~------da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~ 74 (142)
+|++++.+++..+.+++ +|.. .++.. +..+.+..+. .+..+|+||--.. ....++.+.+.
T Consensus 222 ~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~~~~v~~~~----~g~g~Dvvid~~g---~~~~~~~~~~~ 287 (380)
T 1vj0_A 222 NVIVIAGSPNRLKLAEE----IGAD---LTLNRRETSVEERRKAIMDIT----HGRGADFILEATG---DSRALLEGSEL 287 (380)
T ss_dssp EEEEEESCHHHHHHHHH----TTCS---EEEETTTSCHHHHHHHHHHHT----TTSCEEEEEECSS---CTTHHHHHHHH
T ss_pred eEEEEcCCHHHHHHHHH----cCCc---EEEeccccCcchHHHHHHHHh----CCCCCcEEEECCC---CHHHHHHHHHH
Confidence 47899999998888763 5643 22322 2223333331 1336999984332 23457788899
Q ss_pred ccCCeEEEEe
Q 032390 75 LKVGGIAVYD 84 (142)
Q Consensus 75 L~~gG~iv~d 84 (142)
|+++|.++.-
T Consensus 288 l~~~G~iv~~ 297 (380)
T 1vj0_A 288 LRRGGFYSVA 297 (380)
T ss_dssp EEEEEEEEEC
T ss_pred HhcCCEEEEE
Confidence 9999998864
No 399
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=87.62 E-value=1.7 Score=26.41 Aligned_cols=65 Identities=15% Similarity=0.131 Sum_probs=44.5
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHh
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMK 73 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~ 73 (142)
+|..+|-++...+..+..++..|. .+. ...++.+.+..+. ..++|+|++|...+. -.++++.+.+
T Consensus 3 ~ilivdd~~~~~~~l~~~L~~~~~--~v~-~~~~~~~a~~~~~-----~~~~dlvi~D~~l~~~~g~~~~~~l~~ 69 (124)
T 1mb3_A 3 KVLIVEDNELNMKLFHDLLEAQGY--ETL-QTREGLSALSIAR-----ENKPDLILMDIQLPEISGLEVTKWLKE 69 (124)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTC--EEE-EESCHHHHHHHHH-----HHCCSEEEEESBCSSSBHHHHHHHHHH
T ss_pred EEEEEcCCHHHHHHHHHHHHHcCc--EEE-EeCCHHHHHHHHh-----cCCCCEEEEeCCCCCCCHHHHHHHHHc
Confidence 367899999999999999988775 243 4466666665553 346999999975433 2345555544
No 400
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=87.61 E-value=0.52 Score=34.86 Aligned_cols=37 Identities=22% Similarity=0.447 Sum_probs=25.1
Q ss_pred CceeEEEEcCCCc----CcHHHHH----------HHHhcccCCeEEEEecc
Q 032390 50 GSFDYAFVDADKD----NYCNYHE----------RLMKLLKVGGIAVYDNT 86 (142)
Q Consensus 50 ~~fD~IfiD~~~~----~~~~~~~----------~~~~~L~~gG~iv~dn~ 86 (142)
+.||+||++...+ .|++--+ .++..|+|||.+++..-
T Consensus 210 grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aY 260 (324)
T 3trk_A 210 GRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAY 260 (324)
T ss_dssp CCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEEC
T ss_pred CceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEee
Confidence 6899999997532 2443222 23368999999988643
No 401
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=87.60 E-value=1.3 Score=32.86 Aligned_cols=73 Identities=12% Similarity=0.145 Sum_probs=45.9
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|++++.+++..+.+.+ .+|...-+.....+..+.+... ..+.+|+||--.. ...++.+.+.|+++|.
T Consensus 176 ~Vi~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~-----~~~~~d~vi~~~g----~~~~~~~~~~l~~~G~ 243 (336)
T 4b7c_A 176 RVVGIAGGAEKCRFLVE---ELGFDGAIDYKNEDLAAGLKRE-----CPKGIDVFFDNVG----GEILDTVLTRIAFKAR 243 (336)
T ss_dssp EEEEEESSHHHHHHHHH---TTCCSEEEETTTSCHHHHHHHH-----CTTCEEEEEESSC----HHHHHHHHTTEEEEEE
T ss_pred EEEEEeCCHHHHHHHHH---HcCCCEEEECCCHHHHHHHHHh-----cCCCceEEEECCC----cchHHHHHHHHhhCCE
Confidence 47889999988777632 3454322222223444444443 1457999885443 2468888999999999
Q ss_pred EEEec
Q 032390 81 AVYDN 85 (142)
Q Consensus 81 iv~dn 85 (142)
++.-.
T Consensus 244 iv~~G 248 (336)
T 4b7c_A 244 IVLCG 248 (336)
T ss_dssp EEECC
T ss_pred EEEEe
Confidence 98643
No 402
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=87.56 E-value=1.4 Score=33.21 Aligned_cols=71 Identities=24% Similarity=0.331 Sum_probs=45.2
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEE--ccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCC-
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIE--SEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVG- 78 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~--~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~g- 78 (142)
|++++.+++..+.+++ +|...-++... .+..+.+..+. .+.+|+|| |+.- ....++.+.+.|+++
T Consensus 223 Vi~~~~~~~~~~~a~~----lGa~~vi~~~~~~~~~~~~v~~~~-----~~g~Dvvi-d~~G--~~~~~~~~~~~l~~~~ 290 (376)
T 1e3i_A 223 IIAIDINGEKFPKAKA----LGATDCLNPRELDKPVQDVITELT-----AGGVDYSL-DCAG--TAQTLKAAVDCTVLGW 290 (376)
T ss_dssp EEEECSCGGGHHHHHH----TTCSEEECGGGCSSCHHHHHHHHH-----TSCBSEEE-ESSC--CHHHHHHHHHTBCTTT
T ss_pred EEEEcCCHHHHHHHHH----hCCcEEEccccccchHHHHHHHHh-----CCCccEEE-ECCC--CHHHHHHHHHHhhcCC
Confidence 7889999999888764 56532111111 23444444442 34799998 4431 245688889999999
Q ss_pred eEEEEe
Q 032390 79 GIAVYD 84 (142)
Q Consensus 79 G~iv~d 84 (142)
|.++.-
T Consensus 291 G~iv~~ 296 (376)
T 1e3i_A 291 GSCTVV 296 (376)
T ss_dssp CEEEEC
T ss_pred CEEEEE
Confidence 998763
No 403
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=87.52 E-value=4 Score=26.09 Aligned_cols=71 Identities=4% Similarity=-0.044 Sum_probs=44.6
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHH--HHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVG 78 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~--~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~g 78 (142)
.|+.+|.+++.++.+++ . .+.++.||+.+ .+... .-..+|+|++-.+........-...+.+.|+
T Consensus 32 ~v~vid~~~~~~~~~~~----~----g~~~i~gd~~~~~~l~~a-----~i~~ad~vi~~~~~~~~n~~~~~~a~~~~~~ 98 (140)
T 3fwz_A 32 PLVVIETSRTRVDELRE----R----GVRAVLGNAANEEIMQLA-----HLECAKWLILTIPNGYEAGEIVASARAKNPD 98 (140)
T ss_dssp CEEEEESCHHHHHHHHH----T----TCEEEESCTTSHHHHHHT-----TGGGCSEEEECCSCHHHHHHHHHHHHHHCSS
T ss_pred CEEEEECCHHHHHHHHH----c----CCCEEECCCCCHHHHHhc-----CcccCCEEEEECCChHHHHHHHHHHHHHCCC
Confidence 47899999998887764 2 35788898754 34432 1257999998655432222222234566788
Q ss_pred eEEEEe
Q 032390 79 GIAVYD 84 (142)
Q Consensus 79 G~iv~d 84 (142)
..+++.
T Consensus 99 ~~iiar 104 (140)
T 3fwz_A 99 IEIIAR 104 (140)
T ss_dssp SEEEEE
T ss_pred CeEEEE
Confidence 777763
No 404
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=87.41 E-value=0.73 Score=35.16 Aligned_cols=75 Identities=19% Similarity=0.219 Sum_probs=45.7
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccH-HHHHHHHhhcccCCCceeEEEEcCCCcC-----------cHHHH
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEA-LSVLDQLLKYSENEGSFDYAFVDADKDN-----------YCNYH 68 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da-~~~l~~~~~~~~~~~~fD~IfiD~~~~~-----------~~~~~ 68 (142)
+|++++.+++..+.+++ +|. +-+.....+. .+.+..+. ....+|+||--..... ....+
T Consensus 212 ~Vi~~~~~~~~~~~a~~----lGa-~~i~~~~~~~~~~~~~~~~----~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~ 282 (398)
T 2dph_A 212 CVIVGDQNPERLKLLSD----AGF-ETIDLRNSAPLRDQIDQIL----GKPEVDCGVDAVGFEAHGLGDEANTETPNGAL 282 (398)
T ss_dssp EEEEEESCHHHHHHHHT----TTC-EEEETTSSSCHHHHHHHHH----SSSCEEEEEECSCTTCBCSGGGTTSBCTTHHH
T ss_pred EEEEEcCCHHHHHHHHH----cCC-cEEcCCCcchHHHHHHHHh----CCCCCCEEEECCCCccccccccccccccHHHH
Confidence 37899999998887764 454 2222222332 34444442 1336999984333221 12468
Q ss_pred HHHHhcccCCeEEEEe
Q 032390 69 ERLMKLLKVGGIAVYD 84 (142)
Q Consensus 69 ~~~~~~L~~gG~iv~d 84 (142)
+.+++.|++||.++.-
T Consensus 283 ~~~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 283 NSLFDVVRAGGAIGIP 298 (398)
T ss_dssp HHHHHHEEEEEEEECC
T ss_pred HHHHHHHhcCCEEEEe
Confidence 8889999999998753
No 405
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=87.24 E-value=1.2 Score=33.99 Aligned_cols=74 Identities=7% Similarity=0.030 Sum_probs=43.4
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcc----c
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLL----K 76 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L----~ 76 (142)
+|++++.+++..+.+++ +|...-+.....+..+.+..+. .+..+|+||--.... ...++.+.+.| +
T Consensus 240 ~Vi~~~~~~~~~~~~~~----lGa~~vi~~~~~~~~~~i~~~t----~g~g~D~vid~~g~~--~~~~~~~~~~l~~~~~ 309 (404)
T 3ip1_A 240 KVILSEPSEVRRNLAKE----LGADHVIDPTKENFVEAVLDYT----NGLGAKLFLEATGVP--QLVWPQIEEVIWRARG 309 (404)
T ss_dssp EEEEECSCHHHHHHHHH----HTCSEEECTTTSCHHHHHHHHT----TTCCCSEEEECSSCH--HHHHHHHHHHHHHCSC
T ss_pred EEEEECCCHHHHHHHHH----cCCCEEEcCCCCCHHHHHHHHh----CCCCCCEEEECCCCc--HHHHHHHHHHHHhccC
Confidence 37889999999888865 4543212222234444444442 234799998433321 12445555555 9
Q ss_pred CCeEEEEe
Q 032390 77 VGGIAVYD 84 (142)
Q Consensus 77 ~gG~iv~d 84 (142)
++|.++.-
T Consensus 310 ~~G~iv~~ 317 (404)
T 3ip1_A 310 INATVAIV 317 (404)
T ss_dssp CCCEEEEC
T ss_pred CCcEEEEe
Confidence 99999874
No 406
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=87.15 E-value=1.4 Score=33.11 Aligned_cols=71 Identities=15% Similarity=0.267 Sum_probs=45.3
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEE--ccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCC-
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIE--SEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVG- 78 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~--~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~g- 78 (142)
|++++.+++..+.+++ +|...-++... .+..+.+..+. .+.+|+|| |+.- ....++.+.+.|+++
T Consensus 219 Vi~~~~~~~~~~~a~~----lGa~~vi~~~~~~~~~~~~i~~~t-----~gg~Dvvi-d~~g--~~~~~~~~~~~l~~~~ 286 (373)
T 1p0f_A 219 IIGVGTHKDKFPKAIE----LGATECLNPKDYDKPIYEVICEKT-----NGGVDYAV-ECAG--RIETMMNALQSTYCGS 286 (373)
T ss_dssp EEEECSCGGGHHHHHH----TTCSEEECGGGCSSCHHHHHHHHT-----TSCBSEEE-ECSC--CHHHHHHHHHTBCTTT
T ss_pred EEEECCCHHHHHHHHH----cCCcEEEecccccchHHHHHHHHh-----CCCCCEEE-ECCC--CHHHHHHHHHHHhcCC
Confidence 7889999999888764 56532111111 23444444442 34799998 4431 245678889999999
Q ss_pred eEEEEe
Q 032390 79 GIAVYD 84 (142)
Q Consensus 79 G~iv~d 84 (142)
|.++.-
T Consensus 287 G~iv~~ 292 (373)
T 1p0f_A 287 GVTVVL 292 (373)
T ss_dssp CEEEEC
T ss_pred CEEEEE
Confidence 998764
No 407
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=87.11 E-value=3.6 Score=25.09 Aligned_cols=66 Identities=6% Similarity=0.054 Sum_probs=44.5
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHh
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMK 73 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~ 73 (142)
+|..+|-++...+..+..++..|.. .+. ...++.+.+..+. ..++|+|++|...+. -.++++.+.+
T Consensus 8 ~ilivdd~~~~~~~l~~~L~~~g~~-~v~-~~~~~~~a~~~~~-----~~~~dlvl~D~~l~~~~g~~~~~~l~~ 75 (129)
T 1p6q_A 8 KVLIVDDQVTSRLLLGDALQQLGFK-QIT-AAGDGEQGMKIMA-----QNPHHLVISDFNMPKMDGLGLLQAVRA 75 (129)
T ss_dssp CEEEECSSHHHHHHHHHHHHTTTCS-CEE-CCSSHHHHHHHHH-----TSCCSEEEECSSSCSSCHHHHHHHHTT
T ss_pred eEEEEcCCHHHHHHHHHHHHHCCCc-EEE-ecCCHHHHHHHHH-----cCCCCEEEEeCCCCCCCHHHHHHHHhc
Confidence 4678999999999999999877652 233 3456666666553 457999999975443 2344555543
No 408
>2ayx_A Sensor kinase protein RCSC; two independent structural domains, transferase; NMR {Escherichia coli} SCOP: c.23.1.1 c.23.1.6 PDB: 2ayz_A 2ayy_A
Probab=86.67 E-value=4.8 Score=28.45 Aligned_cols=64 Identities=14% Similarity=0.208 Sum_probs=45.4
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHh
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMK 73 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~ 73 (142)
|..+|-++......+..++..|+ .+. ...++.+.+..+. ...||+|++|...+. -.+..+.+.+
T Consensus 132 ILivdd~~~~~~~l~~~L~~~g~--~v~-~a~~~~eal~~l~-----~~~~dlvl~D~~mp~~~G~~l~~~ir~ 197 (254)
T 2ayx_A 132 ILVVDDHPINRRLLADQLGSLGY--QCK-TANDGVDALNVLS-----KNHIDIVLSDVNMPNMDGYRLTQRIRQ 197 (254)
T ss_dssp EEEEESSHHHHHHHHHHHHHHTS--EEE-EECCSHHHHHHHH-----HSCCSEEEEEESSCSSCCHHHHHHHHH
T ss_pred EEEEeCCHHHHHHHHHHHHHcCC--EEE-EECCHHHHHHHHH-----hCCCCEEEEcCCCCCCCHHHHHHHHHh
Confidence 67899999999999999998886 343 4556666666653 357999999965432 2445555554
No 409
>3c3w_A Two component transcriptional regulatory protein; response regulator, two-component regulatory system, DNA-BIN protein; 2.20A {Mycobacterium tuberculosis}
Probab=86.64 E-value=3.5 Score=28.36 Aligned_cols=76 Identities=7% Similarity=-0.049 Sum_probs=48.7
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHhcccCC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMKLLKVG 78 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~~L~~g 78 (142)
+|..+|-++...+..+..++..|. -.+-....++.+.+..+. ..++|+|++|...+. -.++++.+.+. .|+
T Consensus 3 ~ILivdd~~~~~~~l~~~L~~~~~-~~vv~~~~~~~~al~~l~-----~~~~dlvllD~~lp~~~g~~~~~~lr~~-~~~ 75 (225)
T 3c3w_A 3 KVFLVDDHEVVRRGLVDLLGADPE-LDVVGEAGSVAEAMARVP-----AARPDVAVLDVRLPDGNGIELCRDLLSR-MPD 75 (225)
T ss_dssp EEEEECSCHHHHHHHHHHHHTCTT-EEEEEEESSHHHHHHHHH-----HHCCSEEEECSEETTEEHHHHHHHHHHH-CTT
T ss_pred EEEEEcCCHHHHHHHHHHHhcCCC-cEEEEEECCHHHHHHHHh-----hcCCCEEEEeCCCCCCCHHHHHHHHHHh-CCC
Confidence 367899999999999999987641 122224667777766553 346999999975332 34455555543 455
Q ss_pred eEEEE
Q 032390 79 GIAVY 83 (142)
Q Consensus 79 G~iv~ 83 (142)
..+++
T Consensus 76 ~~ii~ 80 (225)
T 3c3w_A 76 LRCLI 80 (225)
T ss_dssp CEEEE
T ss_pred CcEEE
Confidence 55544
No 410
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=86.60 E-value=5.1 Score=29.88 Aligned_cols=71 Identities=10% Similarity=0.019 Sum_probs=45.9
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEE-----ccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhccc
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIE-----SEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLK 76 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~-----~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~ 76 (142)
|++++.+++..+.+++. . ..-+.... .+..+.+..+. .+..+|+||--.. -...++.+.+.|+
T Consensus 207 Vi~~~~~~~~~~~a~~l-~----~~~~~~~~~~~~~~~~~~~v~~~t----~g~g~Dvvid~~g---~~~~~~~~~~~l~ 274 (363)
T 3m6i_A 207 LVITDIDEGRLKFAKEI-C----PEVVTHKVERLSAEESAKKIVESF----GGIEPAVALECTG---VESSIAAAIWAVK 274 (363)
T ss_dssp EEEEESCHHHHHHHHHH-C----TTCEEEECCSCCHHHHHHHHHHHT----SSCCCSEEEECSC---CHHHHHHHHHHSC
T ss_pred EEEECCCHHHHHHHHHh-c----hhcccccccccchHHHHHHHHHHh----CCCCCCEEEECCC---ChHHHHHHHHHhc
Confidence 88999999999999874 1 12233331 22333333331 2457999984332 3456788899999
Q ss_pred CCeEEEEe
Q 032390 77 VGGIAVYD 84 (142)
Q Consensus 77 ~gG~iv~d 84 (142)
+||.++.-
T Consensus 275 ~~G~iv~~ 282 (363)
T 3m6i_A 275 FGGKVFVI 282 (363)
T ss_dssp TTCEEEEC
T ss_pred CCCEEEEE
Confidence 99999864
No 411
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=86.58 E-value=1.2 Score=33.27 Aligned_cols=73 Identities=8% Similarity=-0.015 Sum_probs=45.0
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|++++.+++..+.+++ +|...-+.....+..+.+..+.. +..+|+||--.. ...++.+.+.|+++|.
T Consensus 191 ~Vi~~~~~~~~~~~~~~----~Ga~~~~~~~~~~~~~~v~~~~~----~~g~D~vid~~g----~~~~~~~~~~l~~~G~ 258 (349)
T 3pi7_A 191 RPIVTVRRDEQIALLKD----IGAAHVLNEKAPDFEATLREVMK----AEQPRIFLDAVT----GPLASAIFNAMPKRAR 258 (349)
T ss_dssp EEEEEESCGGGHHHHHH----HTCSEEEETTSTTHHHHHHHHHH----HHCCCEEEESSC----HHHHHHHHHHSCTTCE
T ss_pred EEEEEeCCHHHHHHHHH----cCCCEEEECCcHHHHHHHHHHhc----CCCCcEEEECCC----ChhHHHHHhhhcCCCE
Confidence 47889999999888864 45432222222344444444321 246999884332 2235778899999999
Q ss_pred EEEec
Q 032390 81 AVYDN 85 (142)
Q Consensus 81 iv~dn 85 (142)
++.-.
T Consensus 259 iv~~G 263 (349)
T 3pi7_A 259 WIIYG 263 (349)
T ss_dssp EEECC
T ss_pred EEEEe
Confidence 98743
No 412
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=86.52 E-value=0.93 Score=33.74 Aligned_cols=71 Identities=21% Similarity=0.282 Sum_probs=44.1
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|++++.+++..+.+++ +|...-++....+..+.+... .+.+|+||--.. ....++.+.+.|+++|.
T Consensus 190 ~Vi~~~~~~~~~~~~~~----lGa~~~~d~~~~~~~~~~~~~------~~~~d~vid~~g---~~~~~~~~~~~l~~~G~ 256 (339)
T 1rjw_A 190 NVVAVDIGDEKLELAKE----LGADLVVNPLKEDAAKFMKEK------VGGVHAAVVTAV---SKPAFQSAYNSIRRGGA 256 (339)
T ss_dssp EEEEECSCHHHHHHHHH----TTCSEEECTTTSCHHHHHHHH------HSSEEEEEESSC---CHHHHHHHHHHEEEEEE
T ss_pred EEEEEeCCHHHHHHHHH----CCCCEEecCCCccHHHHHHHH------hCCCCEEEECCC---CHHHHHHHHHHhhcCCE
Confidence 47889999998887764 454311111112333333333 146999985433 24567888899999999
Q ss_pred EEEe
Q 032390 81 AVYD 84 (142)
Q Consensus 81 iv~d 84 (142)
++.-
T Consensus 257 ~v~~ 260 (339)
T 1rjw_A 257 CVLV 260 (339)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 8763
No 413
>2oqr_A Sensory transduction protein REGX3; response regulator, winged-helix-turn-helix, DNA-binding, 3D swapping, two component system; 2.03A {Mycobacterium tuberculosis H37RV}
Probab=86.14 E-value=6.2 Score=26.89 Aligned_cols=65 Identities=9% Similarity=0.122 Sum_probs=45.5
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHh
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMK 73 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~ 73 (142)
+|..+|-++...+..+..++..|+ .+. ...++.+.+..+. ...+|+|++|...+. -.++++.+.+
T Consensus 6 ~ilivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~al~~~~-----~~~~dlvllD~~l~~~~g~~~~~~l~~ 72 (230)
T 2oqr_A 6 SVLIVEDEESLADPLAFLLRKEGF--EAT-VVTDGPAALAEFD-----RAGADIVLLDLMLPGMSGTDVCKQLRA 72 (230)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTC--EEE-EECSHHHHHHHHH-----HHCCSEEEEESSCSSSCHHHHHHHHHH
T ss_pred eEEEEeCCHHHHHHHHHHHHHCCC--EEE-EECCHHHHHHHHh-----ccCCCEEEEECCCCCCCHHHHHHHHHc
Confidence 367899999999999999988765 344 4566777666553 346999999975432 3455555555
No 414
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=86.12 E-value=1.6 Score=32.77 Aligned_cols=71 Identities=21% Similarity=0.363 Sum_probs=45.1
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEE--ccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCC-
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIE--SEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVG- 78 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~--~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~g- 78 (142)
|++++.+++..+.+++ +|...-+.... .+..+.+..+. .+.+|+|| |+.- ....++.+++.|+++
T Consensus 218 Vi~~~~~~~~~~~~~~----lGa~~vi~~~~~~~~~~~~v~~~~-----~~g~D~vi-d~~g--~~~~~~~~~~~l~~~~ 285 (373)
T 2fzw_A 218 IIGVDINKDKFARAKE----FGATECINPQDFSKPIQEVLIEMT-----DGGVDYSF-ECIG--NVKVMRAALEACHKGW 285 (373)
T ss_dssp EEEECSCGGGHHHHHH----HTCSEEECGGGCSSCHHHHHHHHT-----TSCBSEEE-ECSC--CHHHHHHHHHTBCTTT
T ss_pred EEEEcCCHHHHHHHHH----cCCceEeccccccccHHHHHHHHh-----CCCCCEEE-ECCC--cHHHHHHHHHhhccCC
Confidence 7889999999988864 45432111111 23444444442 34799998 4431 245678889999999
Q ss_pred eEEEEe
Q 032390 79 GIAVYD 84 (142)
Q Consensus 79 G~iv~d 84 (142)
|.++.-
T Consensus 286 G~iv~~ 291 (373)
T 2fzw_A 286 GVSVVV 291 (373)
T ss_dssp CEEEEC
T ss_pred cEEEEE
Confidence 998864
No 415
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=85.98 E-value=1.7 Score=32.71 Aligned_cols=71 Identities=17% Similarity=0.317 Sum_probs=44.9
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEE--ccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCC-
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIE--SEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVG- 78 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~--~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~g- 78 (142)
|++++.+++..+.+++ +|...-++... .+..+.+..+. .+.+|+|| |+.- ....++.+.+.|+++
T Consensus 219 Vi~~~~~~~~~~~~~~----lGa~~vi~~~~~~~~~~~~~~~~~-----~~g~D~vi-d~~g--~~~~~~~~~~~l~~~~ 286 (374)
T 2jhf_A 219 IIGVDINKDKFAKAKE----VGATECVNPQDYKKPIQEVLTEMS-----NGGVDFSF-EVIG--RLDTMVTALSCCQEAY 286 (374)
T ss_dssp EEEECSCGGGHHHHHH----TTCSEEECGGGCSSCHHHHHHHHT-----TSCBSEEE-ECSC--CHHHHHHHHHHBCTTT
T ss_pred EEEEcCCHHHHHHHHH----hCCceEecccccchhHHHHHHHHh-----CCCCcEEE-ECCC--CHHHHHHHHHHhhcCC
Confidence 7889999999888764 56431111111 23444444442 34799998 4431 245678889999999
Q ss_pred eEEEEe
Q 032390 79 GIAVYD 84 (142)
Q Consensus 79 G~iv~d 84 (142)
|.++.-
T Consensus 287 G~iv~~ 292 (374)
T 2jhf_A 287 GVSVIV 292 (374)
T ss_dssp CEEEEC
T ss_pred cEEEEe
Confidence 998764
No 416
>3c97_A Signal transduction histidine kinase; structural genomics, signaling, PSI-2, protein structure initiative; 1.70A {Aspergillus oryzae RIB40}
Probab=85.81 E-value=2.4 Score=26.56 Aligned_cols=64 Identities=13% Similarity=0.113 Sum_probs=43.8
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHh
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMK 73 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~ 73 (142)
|..+|-++...+..+..++..|. .+.. ..++.+.+..+. ...+|+|++|...+. -.++++.+.+
T Consensus 13 iLivdd~~~~~~~l~~~L~~~~~--~v~~-~~~~~~al~~l~-----~~~~dlvllD~~lp~~~g~~~~~~l~~ 78 (140)
T 3c97_A 13 VLIAEDNDICRLVAAKALEKCTN--DITV-VTNGLQALQAYQ-----NRQFDVIIMDIQMPVMDGLEAVSEIRN 78 (140)
T ss_dssp EEEECCCHHHHHHHHHHHTTTCS--EEEE-ESSHHHHHHHHH-----HSCCSEEEECTTCCSSCHHHHHHHHHH
T ss_pred EEEEcCCHHHHHHHHHHHHHcCC--ceEE-ECCHHHHHHHHh-----cCCCCEEEEeCCCCCCcHHHHHHHHHh
Confidence 67789999999999998877654 3443 467777776653 357999999975433 2344555543
No 417
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=85.71 E-value=1.8 Score=32.91 Aligned_cols=75 Identities=16% Similarity=0.140 Sum_probs=45.8
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEcc-HHHHHHHHhhcccCCCceeEEEEcCCCcC------------cHHHH
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESE-ALSVLDQLLKYSENEGSFDYAFVDADKDN------------YCNYH 68 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~d-a~~~l~~~~~~~~~~~~fD~IfiD~~~~~------------~~~~~ 68 (142)
|++++.+++..+.+++ +|. +.+.....+ ..+.+..+. ....+|+||--..... ....+
T Consensus 213 Vi~~~~~~~~~~~a~~----lGa-~~i~~~~~~~~~~~v~~~t----~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~ 283 (398)
T 1kol_A 213 VIVGDLNPARLAHAKA----QGF-EIADLSLDTPLHEQIAALL----GEPEVDCAVDAVGFEARGHGHEGAKHEAPATVL 283 (398)
T ss_dssp EEEEESCHHHHHHHHH----TTC-EEEETTSSSCHHHHHHHHH----SSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHH
T ss_pred EEEEcCCHHHHHHHHH----cCC-cEEccCCcchHHHHHHHHh----CCCCCCEEEECCCCcccccccccccccchHHHH
Confidence 7889999999888864 564 222211122 334444432 1347999984332211 12468
Q ss_pred HHHHhcccCCeEEEEec
Q 032390 69 ERLMKLLKVGGIAVYDN 85 (142)
Q Consensus 69 ~~~~~~L~~gG~iv~dn 85 (142)
+.+++.|++||.++.-.
T Consensus 284 ~~~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 284 NSLMQVTRVAGKIGIPG 300 (398)
T ss_dssp HHHHHHEEEEEEEEECS
T ss_pred HHHHHHHhcCCEEEEec
Confidence 88899999999987643
No 418
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=85.48 E-value=1.3 Score=33.08 Aligned_cols=72 Identities=24% Similarity=0.174 Sum_probs=44.5
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCC-CceeEEEEcCCCcCcHHHHHHHHhcccCCe
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE-GSFDYAFVDADKDNYCNYHERLMKLLKVGG 79 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~-~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG 79 (142)
+|++++.+++..+.+++ +|...-+.....+..+.+..+. . +.+|+||--+. ....++.+.+.|+++|
T Consensus 198 ~Vi~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~-----~~~~~d~vi~~~g---~~~~~~~~~~~l~~~G 265 (347)
T 1jvb_A 198 TIIGVDVREEAVEAAKR----AGADYVINASMQDPLAEIRRIT-----ESKGVDAVIDLNN---SEKTLSVYPKALAKQG 265 (347)
T ss_dssp EEEEEESSHHHHHHHHH----HTCSEEEETTTSCHHHHHHHHT-----TTSCEEEEEESCC---CHHHHTTGGGGEEEEE
T ss_pred eEEEEcCCHHHHHHHHH----hCCCEEecCCCccHHHHHHHHh-----cCCCceEEEECCC---CHHHHHHHHHHHhcCC
Confidence 37889999998887754 3532111111122323334431 2 47999985443 2456788889999999
Q ss_pred EEEEe
Q 032390 80 IAVYD 84 (142)
Q Consensus 80 ~iv~d 84 (142)
.++.-
T Consensus 266 ~iv~~ 270 (347)
T 1jvb_A 266 KYVMV 270 (347)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 98863
No 419
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=85.48 E-value=4.6 Score=24.73 Aligned_cols=65 Identities=12% Similarity=0.067 Sum_probs=44.2
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc--CcHHHHHHHHhc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD--NYCNYHERLMKL 74 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~--~~~~~~~~~~~~ 74 (142)
+|..+|-++...+..+..++ .+. .+. ...+..+.+..+. ..++|+|++|...+ +-.++++.+.+.
T Consensus 6 ~ilivdd~~~~~~~l~~~l~-~~~--~v~-~~~~~~~a~~~l~-----~~~~dlvi~d~~l~~~~g~~~~~~l~~~ 72 (133)
T 3nhm_A 6 KVLIVENSWTMRETLRLLLS-GEF--DCT-TAADGASGLQQAL-----AHPPDVLISDVNMDGMDGYALCGHFRSE 72 (133)
T ss_dssp EEEEECSCHHHHHHHHHHHT-TTS--EEE-EESSHHHHHHHHH-----HSCCSEEEECSSCSSSCHHHHHHHHHHS
T ss_pred EEEEEcCCHHHHHHHHHHHh-CCc--EEE-EECCHHHHHHHHh-----cCCCCEEEEeCCCCCCCHHHHHHHHHhC
Confidence 36788999999998888887 443 333 4556677766664 35799999997543 235566666553
No 420
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=85.28 E-value=4.7 Score=24.72 Aligned_cols=67 Identities=7% Similarity=0.108 Sum_probs=46.3
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHh
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMK 73 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~ 73 (142)
+|..+|-++...+..+..++..|.. .+ ....++.+.+..+.. ...+|+|++|...+. -.++++.+.+
T Consensus 7 ~iLivdd~~~~~~~l~~~L~~~g~~-~v-~~~~~~~~a~~~~~~----~~~~dlvi~D~~~p~~~g~~~~~~lr~ 75 (129)
T 3h1g_A 7 KLLVVDDSSTMRRIIKNTLSRLGYE-DV-LEAEHGVEAWEKLDA----NADTKVLITDWNMPEMNGLDLVKKVRS 75 (129)
T ss_dssp CEEEECSCHHHHHHHHHHHHHTTCC-CE-EEESSHHHHHHHHHH----CTTCCEEEECSCCSSSCHHHHHHHHHT
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCc-EE-EEeCCHHHHHHHHHh----CCCCCEEEEeCCCCCCCHHHHHHHHHh
Confidence 4778999999999999999998864 23 345566666655531 347999999976543 2445555554
No 421
>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A
Probab=84.83 E-value=5.1 Score=25.31 Aligned_cols=71 Identities=14% Similarity=0.224 Sum_probs=45.3
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhc--ccCCCceeEEEEcCCCcC--cHHHHHHHHh
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKY--SENEGSFDYAFVDADKDN--YCNYHERLMK 73 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~--~~~~~~fD~IfiD~~~~~--~~~~~~~~~~ 73 (142)
|..+|-++......+..++..|....+ ....++.+.+..+... ......+|+|++|...+. -.++++.+.+
T Consensus 11 ILivdd~~~~~~~l~~~L~~~~~~~~v-~~~~~~~~al~~l~~~~~~~~~~~~dlillD~~lp~~~g~~l~~~l~~ 85 (149)
T 1i3c_A 11 ILLVEDSKADSRLVQEVLKTSTIDHEL-IILRDGLAAMAFLQQQGEYENSPRPNLILLDLNLPKKDGREVLAEIKQ 85 (149)
T ss_dssp EEEECCCHHHHHHHHHHHHSCCSCEEE-EEECSHHHHHHHHTTCGGGTTCCCCSEEEECSCCSSSCHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHHHhcCCCccE-EEeCCHHHHHHHHHhccccccCCCCCEEEEeCCCCCCcHHHHHHHHHh
Confidence 678899999999999999887653223 3456666766655210 000146999999976443 2445555554
No 422
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=84.74 E-value=1.3 Score=33.10 Aligned_cols=73 Identities=14% Similarity=0.148 Sum_probs=44.7
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|++++.+++..+.+++. +|....+.....+..+.+.... .+.+|++|--+. ...++.+.+.|+++|.
T Consensus 188 ~Vi~~~~~~~~~~~~~~~---~g~~~~~d~~~~~~~~~~~~~~-----~~~~d~vi~~~G----~~~~~~~~~~l~~~G~ 255 (357)
T 2zb4_A 188 RVVGICGTHEKCILLTSE---LGFDAAINYKKDNVAEQLRESC-----PAGVDVYFDNVG----GNISDTVISQMNENSH 255 (357)
T ss_dssp EEEEEESCHHHHHHHHHT---SCCSEEEETTTSCHHHHHHHHC-----TTCEEEEEESCC----HHHHHHHHHTEEEEEE
T ss_pred eEEEEeCCHHHHHHHHHH---cCCceEEecCchHHHHHHHHhc-----CCCCCEEEECCC----HHHHHHHHHHhccCcE
Confidence 378889988877766542 4543112211223333344331 237999985544 2567888999999999
Q ss_pred EEEec
Q 032390 81 AVYDN 85 (142)
Q Consensus 81 iv~dn 85 (142)
++.-.
T Consensus 256 iv~~G 260 (357)
T 2zb4_A 256 IILCG 260 (357)
T ss_dssp EEECC
T ss_pred EEEEC
Confidence 88643
No 423
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=84.39 E-value=3.2 Score=30.94 Aligned_cols=75 Identities=9% Similarity=0.040 Sum_probs=44.2
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEE-ccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIE-SEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~-~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
|++++.+++..+.+++ +|...-+.... .+..+.+...... .....+|+||--.. ....++.+.+.|+++|.
T Consensus 195 Vi~~~~~~~~~~~~~~----lGa~~~~~~~~~~~~~~~i~~~~~~-~~g~g~D~vid~~g---~~~~~~~~~~~l~~~G~ 266 (352)
T 1e3j_A 195 VVCTARSPRRLEVAKN----CGADVTLVVDPAKEEESSIIERIRS-AIGDLPNVTIDCSG---NEKCITIGINITRTGGT 266 (352)
T ss_dssp EEEEESCHHHHHHHHH----TTCSEEEECCTTTSCHHHHHHHHHH-HSSSCCSEEEECSC---CHHHHHHHHHHSCTTCE
T ss_pred EEEEcCCHHHHHHHHH----hCCCEEEcCcccccHHHHHHHHhcc-ccCCCCCEEEECCC---CHHHHHHHHHHHhcCCE
Confidence 7889999998888764 56532122111 2333333332100 00246999984332 24567888899999999
Q ss_pred EEEe
Q 032390 81 AVYD 84 (142)
Q Consensus 81 iv~d 84 (142)
++.-
T Consensus 267 iv~~ 270 (352)
T 1e3j_A 267 LMLV 270 (352)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 8864
No 424
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=84.32 E-value=4.8 Score=29.82 Aligned_cols=70 Identities=20% Similarity=0.167 Sum_probs=44.6
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccH-HHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCe
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEA-LSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGG 79 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da-~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG 79 (142)
+|++++.+++..+.+++ +|.. .++...- .+++..+. ....+|+||--.. ....++.+.+.|+++|
T Consensus 198 ~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~~~~----~g~g~D~vid~~g---~~~~~~~~~~~l~~~G 263 (344)
T 2h6e_A 198 TIVGISRSKKHRDFALE----LGAD---YVSEMKDAESLINKLT----DGLGASIAIDLVG---TEETTYNLGKLLAQEG 263 (344)
T ss_dssp EEEEECSCHHHHHHHHH----HTCS---EEECHHHHHHHHHHHH----TTCCEEEEEESSC---CHHHHHHHHHHEEEEE
T ss_pred EEEEEeCCHHHHHHHHH----hCCC---EEeccccchHHHHHhh----cCCCccEEEECCC---ChHHHHHHHHHhhcCC
Confidence 37889999998888765 4543 2222111 23344442 1347999984333 2456788899999999
Q ss_pred EEEEe
Q 032390 80 IAVYD 84 (142)
Q Consensus 80 ~iv~d 84 (142)
.++.-
T Consensus 264 ~iv~~ 268 (344)
T 2h6e_A 264 AIILV 268 (344)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 98863
No 425
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=84.29 E-value=1 Score=33.88 Aligned_cols=72 Identities=17% Similarity=0.117 Sum_probs=45.4
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEE-ccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCe
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIE-SEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGG 79 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~-~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG 79 (142)
+|++++.+++..+.+++ +|...-+. .. .+..+.+..+. .+..+|+||--... ..++.+.+.|+++|
T Consensus 215 ~Vi~~~~~~~~~~~~~~----lGa~~vi~-~~~~~~~~~v~~~~----~g~g~D~vid~~g~----~~~~~~~~~l~~~G 281 (363)
T 3uog_A 215 EVIVTSSSREKLDRAFA----LGADHGIN-RLEEDWVERVYALT----GDRGADHILEIAGG----AGLGQSLKAVAPDG 281 (363)
T ss_dssp EEEEEESCHHHHHHHHH----HTCSEEEE-TTTSCHHHHHHHHH----TTCCEEEEEEETTS----SCHHHHHHHEEEEE
T ss_pred EEEEEecCchhHHHHHH----cCCCEEEc-CCcccHHHHHHHHh----CCCCceEEEECCCh----HHHHHHHHHhhcCC
Confidence 47889999998888765 46532222 11 23444444442 23479999854432 24677889999999
Q ss_pred EEEEec
Q 032390 80 IAVYDN 85 (142)
Q Consensus 80 ~iv~dn 85 (142)
.++.-.
T Consensus 282 ~iv~~G 287 (363)
T 3uog_A 282 RISVIG 287 (363)
T ss_dssp EEEEEC
T ss_pred EEEEEe
Confidence 988643
No 426
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=84.07 E-value=5.1 Score=24.85 Aligned_cols=64 Identities=16% Similarity=0.028 Sum_probs=41.5
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHh
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMK 73 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~ 73 (142)
+|..+|-++...+..++.++.. ..+. ...++.+.+..+. ..++|+|++|...+. -.++++.+..
T Consensus 5 ~iLivdd~~~~~~~l~~~l~~~---~~v~-~~~~~~~a~~~~~-----~~~~dlvi~D~~l~~~~g~~~~~~l~~ 70 (140)
T 3n53_A 5 KILIIDQQDFSRIELKNFLDSE---YLVI-ESKNEKEALEQID-----HHHPDLVILDMDIIGENSPNLCLKLKR 70 (140)
T ss_dssp EEEEECSCHHHHHHHHHHHTTT---SEEE-EESSHHHHHHHHH-----HHCCSEEEEETTC------CHHHHHHT
T ss_pred EEEEEeCCHHHHHHHHHHHHhc---ceEE-EeCCHHHHHHHHh-----cCCCCEEEEeCCCCCCcHHHHHHHHHc
Confidence 3678899999999999888665 2343 4566777766653 347999999975432 2334455544
No 427
>1a04_A Nitrate/nitrite response regulator protein NARL; signal transduction protein, response regulators, two- component systems; 2.20A {Escherichia coli} SCOP: a.4.6.2 c.23.1.1 PDB: 1rnl_A
Probab=83.97 E-value=7.3 Score=26.26 Aligned_cols=74 Identities=14% Similarity=-0.034 Sum_probs=46.4
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHhcccCC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMKLLKVG 78 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~~L~~g 78 (142)
+|..+|-++...+..+..++..+- -.+-....++.+.+..+. ..++|+|++|...+. -.++++.+.+. .|.
T Consensus 7 ~ilivdd~~~~~~~l~~~L~~~~~-~~vv~~~~~~~~al~~~~-----~~~~dlvllD~~lp~~~g~~~~~~lr~~-~~~ 79 (215)
T 1a04_A 7 TILLIDDHPMLRTGVKQLISMAPD-ITVVGEASNGEQGIELAE-----SLDPDLILLDLNMPGMNGLETLDKLREK-SLS 79 (215)
T ss_dssp EEEEECSCHHHHHHHHHHHTTCTT-EEEEEEESSHHHHHHHHH-----HHCCSEEEEETTSTTSCHHHHHHHHHHS-CCC
T ss_pred EEEEECCCHHHHHHHHHHHhcCCC-cEEEEEeCCHHHHHHHHH-----hcCCCEEEEeCCCCCCcHHHHHHHHHHh-CCC
Confidence 367889999998888888876531 123234567777666553 346999999976443 24455555543 344
Q ss_pred eEE
Q 032390 79 GIA 81 (142)
Q Consensus 79 G~i 81 (142)
..+
T Consensus 80 ~~i 82 (215)
T 1a04_A 80 GRI 82 (215)
T ss_dssp SEE
T ss_pred CcE
Confidence 333
No 428
>2lse_A Four helix bundle protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=84.41 E-value=0.21 Score=29.56 Aligned_cols=71 Identities=21% Similarity=0.222 Sum_probs=49.0
Q ss_pred hhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeEEEEec
Q 032390 9 RETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 85 (142)
Q Consensus 9 ~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~iv~dn 85 (142)
..+-..|++.++++.-+-+-++-.||+...+..+ .....-.+-|++..-..++++.+..+|++.|.++...
T Consensus 21 dgapdearerieklakdvkdeleegdaknmiekf------rdemeqmykdapnavmeqlleeiekllkkagslvprg 91 (101)
T 2lse_A 21 DGAPDEARERIEKLAKDVKDELEEGDAKNMIEKF------RDEMEQMYKDAPNAVMEQLLEEIEKLLKKAGSLVPRG 91 (101)
Confidence 3444567777776654444567778887776655 2335556678877667888899999999988887643
No 429
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=83.42 E-value=1.8 Score=32.15 Aligned_cols=72 Identities=15% Similarity=0.230 Sum_probs=44.8
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEE-ccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCe
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIE-SEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGG 79 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~-~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG 79 (142)
+|++++.+++..+.+++ .+|...-++... .+..+.+.... .+.+|+||--.. ...++.+.+.|+++|
T Consensus 182 ~V~~~~~~~~~~~~~~~---~~g~~~~~d~~~~~~~~~~~~~~~-----~~~~d~vi~~~g----~~~~~~~~~~l~~~G 249 (345)
T 2j3h_A 182 YVVGSAGSKEKVDLLKT---KFGFDDAFNYKEESDLTAALKRCF-----PNGIDIYFENVG----GKMLDAVLVNMNMHG 249 (345)
T ss_dssp EEEEEESSHHHHHHHHH---TSCCSEEEETTSCSCSHHHHHHHC-----TTCEEEEEESSC----HHHHHHHHTTEEEEE
T ss_pred EEEEEeCCHHHHHHHHH---HcCCceEEecCCHHHHHHHHHHHh-----CCCCcEEEECCC----HHHHHHHHHHHhcCC
Confidence 37889999888877763 235421121111 13344444431 357999985443 146788899999999
Q ss_pred EEEEe
Q 032390 80 IAVYD 84 (142)
Q Consensus 80 ~iv~d 84 (142)
.++.-
T Consensus 250 ~~v~~ 254 (345)
T 2j3h_A 250 RIAVC 254 (345)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 98864
No 430
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=83.13 E-value=1.2 Score=33.11 Aligned_cols=72 Identities=15% Similarity=0.185 Sum_probs=43.8
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|++++.+++..+.+++ +|...-++....+..+.+.... ....+|+||--.. . ..++.+.+.|+++|.
T Consensus 193 ~Vi~~~~~~~~~~~~~~----~ga~~~~d~~~~~~~~~~~~~~----~~~~~d~vi~~~g-~---~~~~~~~~~l~~~G~ 260 (343)
T 2eih_A 193 RVIATAGSEDKLRRAKA----LGADETVNYTHPDWPKEVRRLT----GGKGADKVVDHTG-A---LYFEGVIKATANGGR 260 (343)
T ss_dssp EEEEEESSHHHHHHHHH----HTCSEEEETTSTTHHHHHHHHT----TTTCEEEEEESSC-S---SSHHHHHHHEEEEEE
T ss_pred EEEEEeCCHHHHHHHHh----cCCCEEEcCCcccHHHHHHHHh----CCCCceEEEECCC-H---HHHHHHHHhhccCCE
Confidence 37889999998888764 3543111111223333343331 1347999986554 2 246778899999999
Q ss_pred EEEe
Q 032390 81 AVYD 84 (142)
Q Consensus 81 iv~d 84 (142)
++.-
T Consensus 261 ~v~~ 264 (343)
T 2eih_A 261 IAIA 264 (343)
T ss_dssp EEES
T ss_pred EEEE
Confidence 8763
No 431
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=83.05 E-value=0.74 Score=34.65 Aligned_cols=52 Identities=13% Similarity=0.187 Sum_probs=35.5
Q ss_pred EEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc--------C------cHHHHHHHHhcccCCeEEEEecccccc
Q 032390 29 NFIESEALSVLDQLLKYSENEGSFDYAFVDADKD--------N------YCNYHERLMKLLKVGGIAVYDNTLWGG 90 (142)
Q Consensus 29 ~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~--------~------~~~~~~~~~~~L~~gG~iv~dn~~~~g 90 (142)
.+++||..+.. .+.+||+|+.|-... . .+..++.+.+.|+|||-+++. .+.|
T Consensus 155 ~~IqGD~~~~~--------~~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVK--VFQG 220 (344)
T 3r24_A 155 STLIGDCATVH--------TANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVK--ITEH 220 (344)
T ss_dssp EEEESCGGGEE--------ESSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEE--ECSS
T ss_pred eEEEccccccc--------cCCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEE--EecC
Confidence 45999975421 257899999985310 1 234466677899999999997 4444
No 432
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=82.92 E-value=1.6 Score=32.64 Aligned_cols=68 Identities=10% Similarity=0.164 Sum_probs=43.8
Q ss_pred EEEEeCChh---HHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCC
Q 032390 2 ITAIDVNRE---TYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVG 78 (142)
Q Consensus 2 v~~ve~~~~---~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~g 78 (142)
|++++.+++ ..+.+++ +|.. .+.....+..+ +..+ . + .+|+|| |+.- ....++.+.+.|+++
T Consensus 202 Vi~~~~~~~~~~~~~~~~~----lGa~-~v~~~~~~~~~-i~~~-~----g-g~Dvvi-d~~g--~~~~~~~~~~~l~~~ 266 (357)
T 2b5w_A 202 LYCLGRRDRPDPTIDIIEE----LDAT-YVDSRQTPVED-VPDV-Y----E-QMDFIY-EATG--FPKHAIQSVQALAPN 266 (357)
T ss_dssp EEEEECCCSSCHHHHHHHH----TTCE-EEETTTSCGGG-HHHH-S----C-CEEEEE-ECSC--CHHHHHHHHHHEEEE
T ss_pred EEEEeCCcccHHHHHHHHH----cCCc-ccCCCccCHHH-HHHh-C----C-CCCEEE-ECCC--ChHHHHHHHHHHhcC
Confidence 889999988 8877764 5542 23111223444 4443 1 3 799998 4432 245678889999999
Q ss_pred eEEEEe
Q 032390 79 GIAVYD 84 (142)
Q Consensus 79 G~iv~d 84 (142)
|.++.-
T Consensus 267 G~iv~~ 272 (357)
T 2b5w_A 267 GVGALL 272 (357)
T ss_dssp EEEEEC
T ss_pred CEEEEE
Confidence 998864
No 433
>2jba_A Phosphate regulon transcriptional regulatory PROT; transcription factor, sensory transduction, phosphate regula transcription regulation; 1.45A {Escherichia coli} PDB: 2jba_B 1b00_A 2iyn_A 2jb9_A 1zes_A
Probab=82.90 E-value=5.8 Score=23.93 Aligned_cols=65 Identities=14% Similarity=0.070 Sum_probs=44.1
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHh
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMK 73 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~ 73 (142)
+|..+|-++...+..+..++..|. .+. ...++.+.+..+. ..++|+|++|...+. -.++++.+.+
T Consensus 4 ~ilivdd~~~~~~~l~~~l~~~g~--~v~-~~~~~~~a~~~~~-----~~~~dlvi~D~~l~~~~g~~~~~~l~~ 70 (127)
T 2jba_A 4 RILVVEDEAPIREMVCFVLEQNGF--QPV-EAEDYDSAVNQLN-----EPWPDLILLAWMLPGGSGIQFIKHLRR 70 (127)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTC--EEE-EECSHHHHHTTCS-----SSCCSEEEEESEETTEEHHHHHHHHHT
T ss_pred EEEEEcCCHHHHHHHHHHHHHCCc--eEE-EeCCHHHHHHHHh-----ccCCCEEEEecCCCCCCHHHHHHHHHh
Confidence 367889999999999999988775 343 4556666665442 457999999975332 2445555554
No 434
>2gwr_A DNA-binding response regulator MTRA; two-component regulatory system, transcription regulation, phosphorylation, OMPR family; 2.10A {Mycobacterium tuberculosis} PDB: 3nhz_A
Probab=82.87 E-value=9.1 Score=26.34 Aligned_cols=64 Identities=16% Similarity=0.133 Sum_probs=44.4
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHh
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMK 73 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~ 73 (142)
|..+|-++...+..+..++..|+. +. ...++.+.+..+. ...+|+|++|...+. -.++++.+.+
T Consensus 8 ILivdd~~~~~~~l~~~L~~~g~~--v~-~~~~~~~al~~l~-----~~~~dlvilD~~l~~~~g~~~~~~lr~ 73 (238)
T 2gwr_A 8 ILVVDDDASLAEMLTIVLRGEGFD--TA-VIGDGTQALTAVR-----ELRPDLVLLDLMLPGMNGIDVCRVLRA 73 (238)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTCE--EE-EECCGGGHHHHHH-----HHCCSEEEEESSCSSSCHHHHHHHHHT
T ss_pred EEEEeCCHHHHHHHHHHHHHCCCE--EE-EECCHHHHHHHHH-----hCCCCEEEEeCCCCCCCHHHHHHHHHh
Confidence 678999999999999999887753 43 4556666665553 346999999975432 3445555544
No 435
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=82.68 E-value=2.5 Score=31.56 Aligned_cols=72 Identities=10% Similarity=0.106 Sum_probs=43.3
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|++++.+++..+.+++ +|...-+.....+..+.+.... ....+|++|--+... .++.+.+.|+++|.
T Consensus 189 ~Vi~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~----~~~~~d~vi~~~G~~----~~~~~~~~l~~~G~ 256 (354)
T 2j8z_A 189 IPLVTAGSQKKLQMAEK----LGAAAGFNYKKEDFSEATLKFT----KGAGVNLILDCIGGS----YWEKNVNCLALDGR 256 (354)
T ss_dssp EEEEEESCHHHHHHHHH----HTCSEEEETTTSCHHHHHHHHT----TTSCEEEEEESSCGG----GHHHHHHHEEEEEE
T ss_pred EEEEEeCCHHHHHHHHH----cCCcEEEecCChHHHHHHHHHh----cCCCceEEEECCCch----HHHHHHHhccCCCE
Confidence 37889999988887743 3532111211223333333331 134699998655432 46777899999999
Q ss_pred EEEe
Q 032390 81 AVYD 84 (142)
Q Consensus 81 iv~d 84 (142)
++.-
T Consensus 257 iv~~ 260 (354)
T 2j8z_A 257 WVLY 260 (354)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 8864
No 436
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=82.61 E-value=7.1 Score=28.31 Aligned_cols=74 Identities=12% Similarity=0.071 Sum_probs=46.8
Q ss_pred CEEEEeCC--hhHHHHHHHHHHHcCCCCcEEEEEccHH-HHHHHHhhcccCCCceeEEEEc-CCC-cCcHHHHHHHHhcc
Q 032390 1 MITAIDVN--RETYEIGLPIIKKAGVDHKINFIESEAL-SVLDQLLKYSENEGSFDYAFVD-ADK-DNYCNYHERLMKLL 75 (142)
Q Consensus 1 ~v~~ve~~--~~~~~~a~~~~~~~~~~~~v~~~~~da~-~~l~~~~~~~~~~~~fD~IfiD-~~~-~~~~~~~~~~~~~L 75 (142)
+|..|+-+ +.......+.++..|+. |+++..+.. .....+ .+||+|+++ ... .-....++.+.+.+
T Consensus 6 ~vLiV~g~~~~~~a~~l~~aL~~~g~~--V~~i~~~~~~~~~~~L-------~~yDvIIl~d~~~~~l~~~~~~~L~~yV 76 (259)
T 3rht_A 6 RVLYCGDTSLETAAGYLAGLMTSWQWE--FDYIPSHVGLDVGELL-------AKQDLVILSDYPAERMTAQAIDQLVTMV 76 (259)
T ss_dssp CEEEEESSCTTTTHHHHHHHHHHTTCC--CEEECTTSCBCSSHHH-------HTCSEEEEESCCGGGBCHHHHHHHHHHH
T ss_pred eEEEECCCCchhHHHHHHHHHHhCCce--EEEecccccccChhHH-------hcCCEEEEcCCccccCCHHHHHHHHHHH
Confidence 35566655 56677778888888874 777654432 111233 379999886 322 12356777788888
Q ss_pred cCCeEEEE
Q 032390 76 KVGGIAVY 83 (142)
Q Consensus 76 ~~gG~iv~ 83 (142)
+.||-+++
T Consensus 77 ~~GGgLi~ 84 (259)
T 3rht_A 77 KAGCGLVM 84 (259)
T ss_dssp HTTCEEEE
T ss_pred HhCCeEEE
Confidence 88887765
No 437
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=82.30 E-value=6.3 Score=23.87 Aligned_cols=66 Identities=14% Similarity=0.224 Sum_probs=45.3
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHh
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMK 73 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~ 73 (142)
+|..+|-++...+..+..++..|.. .+ ....++.+.+..+. ..++|+|++|...+. -.++++.+.+
T Consensus 6 ~ilivdd~~~~~~~l~~~l~~~~~~-~v-~~~~~~~~a~~~~~-----~~~~dlvi~D~~l~~~~g~~l~~~l~~ 73 (128)
T 1jbe_A 6 KFLVVDDFSTMRRIVRNLLKELGFN-NV-EEAEDGVDALNKLQ-----AGGYGFVISDWNMPNMDGLELLKTIRA 73 (128)
T ss_dssp CEEEECSCHHHHHHHHHHHHHTTCC-CE-EEESSHHHHHHHHT-----TCCCCEEEEESCCSSSCHHHHHHHHHC
T ss_pred EEEEECCCHHHHHHHHHHHHHcCCc-EE-EeeCCHHHHHHHHH-----hcCCCEEEEeCCCCCCCHHHHHHHHHh
Confidence 4678899999999999999887753 23 34456677666653 457999999976443 2344555544
No 438
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=82.23 E-value=3 Score=31.01 Aligned_cols=67 Identities=15% Similarity=0.081 Sum_probs=42.2
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeEE
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIA 81 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~i 81 (142)
|+++ .+++..+.+++ +|... +. ...+..+.+.... ....+|+||--.. ...++.+.+.|+++|.+
T Consensus 178 Vi~~-~~~~~~~~~~~----lGa~~-i~-~~~~~~~~~~~~~----~~~g~D~vid~~g----~~~~~~~~~~l~~~G~i 242 (343)
T 3gaz_A 178 VFAT-ARGSDLEYVRD----LGATP-ID-ASREPEDYAAEHT----AGQGFDLVYDTLG----GPVLDASFSAVKRFGHV 242 (343)
T ss_dssp EEEE-ECHHHHHHHHH----HTSEE-EE-TTSCHHHHHHHHH----TTSCEEEEEESSC----THHHHHHHHHEEEEEEE
T ss_pred EEEE-eCHHHHHHHHH----cCCCE-ec-cCCCHHHHHHHHh----cCCCceEEEECCC----cHHHHHHHHHHhcCCeE
Confidence 6677 77877766654 46532 44 3334444444432 2357999884333 24678888999999998
Q ss_pred EE
Q 032390 82 VY 83 (142)
Q Consensus 82 v~ 83 (142)
+.
T Consensus 243 v~ 244 (343)
T 3gaz_A 243 VS 244 (343)
T ss_dssp EE
T ss_pred EE
Confidence 86
No 439
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=82.10 E-value=1.3 Score=33.03 Aligned_cols=35 Identities=23% Similarity=0.331 Sum_probs=24.3
Q ss_pred CceeEEEEcCCCc--C--cHH----------HHHHHHhcccCCeEEEEe
Q 032390 50 GSFDYAFVDADKD--N--YCN----------YHERLMKLLKVGGIAVYD 84 (142)
Q Consensus 50 ~~fD~IfiD~~~~--~--~~~----------~~~~~~~~L~~gG~iv~d 84 (142)
+++|+||+|-..+ . |.+ .++.+...|+|||.+++.
T Consensus 205 ~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~K 253 (320)
T 2hwk_A 205 PKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSI 253 (320)
T ss_dssp CCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEE
T ss_pred CcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEE
Confidence 5799999996421 1 231 234455789999999996
No 440
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=81.79 E-value=2.9 Score=31.27 Aligned_cols=72 Identities=18% Similarity=0.164 Sum_probs=42.9
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|++++.+++..+.+++ +|...-+.....+..+.+.... ....+|+||--+. ...++.+.+.|+++|.
T Consensus 197 ~Vi~~~~~~~~~~~~~~----~ga~~~~d~~~~~~~~~~~~~~----~~~~~D~vi~~~G----~~~~~~~~~~l~~~G~ 264 (351)
T 1yb5_A 197 KILGTAGTEEGQKIVLQ----NGAHEVFNHREVNYIDKIKKYV----GEKGIDIIIEMLA----NVNLSKDLSLLSHGGR 264 (351)
T ss_dssp EEEEEESSHHHHHHHHH----TTCSEEEETTSTTHHHHHHHHH----CTTCEEEEEESCH----HHHHHHHHHHEEEEEE
T ss_pred EEEEEeCChhHHHHHHH----cCCCEEEeCCCchHHHHHHHHc----CCCCcEEEEECCC----hHHHHHHHHhccCCCE
Confidence 37889999988876653 4543112211223333333332 1347999985443 2356778899999999
Q ss_pred EEEe
Q 032390 81 AVYD 84 (142)
Q Consensus 81 iv~d 84 (142)
++.-
T Consensus 265 iv~~ 268 (351)
T 1yb5_A 265 VIVV 268 (351)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 8863
No 441
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=80.72 E-value=1.1 Score=34.56 Aligned_cols=61 Identities=5% Similarity=0.152 Sum_probs=37.5
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKV 77 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~ 77 (142)
+|++||..+-. .. +.. .++|+++.+|+.++.+ ...+||+|++|-.. +.......+.++|..
T Consensus 235 ~V~aVD~~~l~-~~----l~~---~~~V~~~~~d~~~~~~-------~~~~~D~vvsDm~~-~p~~~~~l~~~wl~~ 295 (375)
T 4auk_A 235 WVYSVDNGPMA-QS----LMD---TGQVTWLREDGFKFRP-------TRSNISWMVCDMVE-KPAKVAALMAQWLVN 295 (375)
T ss_dssp EEEEECSSCCC-HH----HHT---TTCEEEECSCTTTCCC-------CSSCEEEEEECCSS-CHHHHHHHHHHHHHT
T ss_pred EEEEEEhhhcC-hh----hcc---CCCeEEEeCccccccC-------CCCCcCEEEEcCCC-ChHHhHHHHHHHHhc
Confidence 48899975421 11 111 2589999999987532 14679999999864 234444444444443
No 442
>3eqz_A Response regulator; structural genomics, unknown function, PSI-2, protein struct initiative; 2.15A {Colwellia psychrerythraea} SCOP: c.23.1.0
Probab=80.67 E-value=7.4 Score=23.66 Aligned_cols=72 Identities=11% Similarity=0.014 Sum_probs=43.9
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCc--HHHHHHHHhcccCC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNY--CNYHERLMKLLKVG 78 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~--~~~~~~~~~~L~~g 78 (142)
+|..+|-++...+..+..++..+. .+. ...+..+.+..+ ... +|+|++|...+.. .++++.+.+. .+.
T Consensus 5 ~ilivdd~~~~~~~l~~~L~~~~~--~v~-~~~~~~~~~~~~-----~~~-~dlvi~D~~l~~~~g~~~~~~l~~~-~~~ 74 (135)
T 3eqz_A 5 RVFIVDDDTLTCNLLKTIVEPIFG--NVE-AFQHPRAFLTLS-----LNK-QDIIILDLMMPDMDGIEVIRHLAEH-KSP 74 (135)
T ss_dssp EEEEECSCHHHHHHHHHHHTTTCS--CEE-EESCHHHHTTSC-----CCT-TEEEEEECCTTTTHHHHHHHHHHHT-TCC
T ss_pred eEEEEeCCHHHHHHHHHHHHhhcc--eee-eecCHHHHHHhh-----ccC-CCEEEEeCCCCCCCHHHHHHHHHhC-CCC
Confidence 367889999999999998877632 233 344555554333 134 9999999865432 3345555443 344
Q ss_pred eEEE
Q 032390 79 GIAV 82 (142)
Q Consensus 79 G~iv 82 (142)
..++
T Consensus 75 ~~ii 78 (135)
T 3eqz_A 75 ASLI 78 (135)
T ss_dssp CEEE
T ss_pred CCEE
Confidence 4433
No 443
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=80.33 E-value=1.9 Score=35.07 Aligned_cols=38 Identities=16% Similarity=0.404 Sum_probs=25.3
Q ss_pred CCceeEEEEcCCCc----CcHHHH----------HHHHhcccCCeEEEEecc
Q 032390 49 EGSFDYAFVDADKD----NYCNYH----------ERLMKLLKVGGIAVYDNT 86 (142)
Q Consensus 49 ~~~fD~IfiD~~~~----~~~~~~----------~~~~~~L~~gG~iv~dn~ 86 (142)
.++||+||++...+ .|.+-- ..+...|+|||.+++..-
T Consensus 219 ~~ryDlvfvn~~t~yr~HHyqQCeDHa~~l~ml~~~al~~l~pGGt~v~~~Y 270 (670)
T 4gua_A 219 QARYDLVFINIGTKYRNHHFQQCEDHAATLKTLSRSALNCLNPGGTLVVKSY 270 (670)
T ss_dssp CCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEES
T ss_pred CCcccEEEEecCCCcccchHHHHHHHHHHHHHHhHHHHhhcCCCceEEEEEe
Confidence 46899999997532 243322 233468999999987533
No 444
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A
Probab=79.69 E-value=10 Score=28.45 Aligned_cols=66 Identities=14% Similarity=0.096 Sum_probs=46.5
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHhc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMKL 74 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~~ 74 (142)
+|..||-++......+..++..|. .+ ....++.+.+..+. ..++|+|++|-..+. -.+.++.+.+.
T Consensus 7 ~iLivdD~~~~~~~l~~~L~~~g~--~v-~~a~~~~~al~~~~-----~~~~dlvllD~~mp~~~G~~~~~~lr~~ 74 (394)
T 3eq2_A 7 TLLIIDDDEVVRESLAAYLEDSNF--KV-LQALNGLQGLQIFE-----SEQPDLVICDLRMPQIDGLELIRRIRQT 74 (394)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTE--EE-EECSSHHHHHHHHH-----HSCCSEEEECCCSSSSCTHHHHHHHHHT
T ss_pred EEEEEeCCHHHHHHHHHHHHhCCC--EE-EEECCHHHHHHHHh-----hCCCCEEEEcCCCCCCCHHHHHHHHHhh
Confidence 367899999999999999988765 23 24556777776664 357999999975443 34556666554
No 445
>2hqr_A Putative transcriptional regulator; phosporylation-independent response regulator, H. pylori, SY dimer, signaling protein; NMR {Helicobacter pylori}
Probab=79.63 E-value=12 Score=25.33 Aligned_cols=64 Identities=11% Similarity=0.015 Sum_probs=45.8
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKL 74 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~ 74 (142)
+|..+|-++...+..+..++..|+ .+. ...++.+.+..+. ..++|+|+ -+. .+-.++++.+.+.
T Consensus 2 ~ilivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~al~~l~-----~~~~dlvi-lp~-~~g~~~~~~lr~~ 65 (223)
T 2hqr_A 2 RVLLIEKNSVLGGEIEKGLNVKGF--MAD-VTESLEDGEYLMD-----IRNYDLVM-VSD-KNALSFVSRIKEK 65 (223)
T ss_dssp CEEEECSCHHHHHHHHHHHGGGTC--CEE-EESSHHHHHHHHT-----TSCCSEEE-ECC-TTHHHHHHHHHHH
T ss_pred EEEEEcCCHHHHHHHHHHHHHCCc--EEE-EECCHHHHHHHHh-----cCCCCEEE-eCC-CCHHHHHHHHHhC
Confidence 477899999999999999988776 354 6677777777663 45799999 332 2335566666655
No 446
>1zh2_A KDP operon transcriptional regulatory protein KDPE; two-component system, gene regulation, transcription factor, KDP potassium transport system; 2.00A {Escherichia coli} SCOP: c.23.1.1 PDB: 1zh4_A
Probab=79.20 E-value=7.8 Score=23.03 Aligned_cols=63 Identities=8% Similarity=0.044 Sum_probs=42.0
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHH
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLM 72 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~ 72 (142)
|..+|-++...+..+..++..|. .+. ...+..+.+..+. ..++|+|++|...+. -.++++.+.
T Consensus 4 ilivdd~~~~~~~l~~~l~~~~~--~v~-~~~~~~~~~~~~~-----~~~~dlvi~D~~l~~~~g~~~~~~l~ 68 (121)
T 1zh2_A 4 VLIVEDEQAIRRFLRTALEGDGM--RVF-EAETLQRGLLEAA-----TRKPDLIILDLGLPDGDGIEFIRDLR 68 (121)
T ss_dssp EEEECSCHHHHHHHHHHHHTTTC--EEE-EESSHHHHHHHHH-----HHCCSEEEEESEETTEEHHHHHHHHH
T ss_pred EEEEeCCHHHHHHHHHHHhcCCC--EEE-EeCCHHHHHHHHh-----cCCCCEEEEeCCCCCCcHHHHHHHHH
Confidence 67789999999999999987664 233 4456666555443 346999999975432 234555554
No 447
>3dzd_A Transcriptional regulator (NTRC family); sigma43 activator, AAA+ ATPase, response regulator, transcriptional activator, ATP-binding; HET: ADP; 2.40A {Aquifex aeolicus} PDB: 1zit_A 2jrl_A
Probab=79.14 E-value=11 Score=28.55 Aligned_cols=73 Identities=10% Similarity=0.047 Sum_probs=48.7
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHhcccCC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMKLLKVG 78 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~~L~~g 78 (142)
+|..||=++......+..++..|.. + ....++.+.+..+. ...||+|++|-..+. -.++++.+.+. .|.
T Consensus 2 ~ILiVDDd~~~~~~l~~~L~~~g~~--v-~~a~~~~eal~~l~-----~~~~DlvllDi~mP~~dG~ell~~lr~~-~~~ 72 (368)
T 3dzd_A 2 RVLVVDDEESITSSLSAILEEEGYH--P-DTAKTLREAEKKIK-----ELFFPVIVLDVWMPDGDGVNFIDFIKEN-SPD 72 (368)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCE--E-EEESSHHHHHHHHH-----HBCCSEEEEESEETTEETTTHHHHHHHH-CTT
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCE--E-EEECCHHHHHHHHH-----hCCCCEEEEeCCCCCCCHHHHHHHHHhh-CCC
Confidence 3678999999999999999988763 3 45667777766654 357999999974332 23445555443 244
Q ss_pred eEEE
Q 032390 79 GIAV 82 (142)
Q Consensus 79 G~iv 82 (142)
..++
T Consensus 73 ~pvI 76 (368)
T 3dzd_A 73 SVVI 76 (368)
T ss_dssp CEEE
T ss_pred CeEE
Confidence 4333
No 448
>1ny5_A Transcriptional regulator (NTRC family); AAA+ ATPase, sigma54 activator, bacterial transcription, DIM transcription; HET: ADP; 2.40A {Aquifex aeolicus} SCOP: c.23.1.1 c.37.1.20 PDB: 1ny6_A* 3m0e_A* 1zy2_A*
Probab=78.51 E-value=17 Score=27.51 Aligned_cols=72 Identities=10% Similarity=0.059 Sum_probs=48.6
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHhcccCC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMKLLKVG 78 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~~L~~g 78 (142)
+|..||-++......+..++..|+ .+. ...++.+.+..+. ...+|+|++|...+. -.++++.+.+. .|+
T Consensus 2 ~ILIVDDd~~~~~~l~~~L~~~g~--~v~-~a~~~~eal~~l~-----~~~~DlvllD~~mp~~dG~ell~~lr~~-~~~ 72 (387)
T 1ny5_A 2 NVLVIEDDKVFRGLLEEYLSMKGI--KVE-SAERGKEAYKLLS-----EKHFNVVLLDLLLPDVNGLEILKWIKER-SPE 72 (387)
T ss_dssp EEEEECCCHHHHHHHHHHHHHHTC--EEE-EESSHHHHHHHHH-----HSCCSEEEEESBCSSSBHHHHHHHHHHH-CTT
T ss_pred EEEEEECCHHHHHHHHHHHHHCCC--EEE-EECCHHHHHHHHH-----hCCCCEEEEeCCCCCCCHHHHHHHHHhh-CCC
Confidence 367899999999999999988776 343 4566777666553 357999999975433 34455555543 344
Q ss_pred eEE
Q 032390 79 GIA 81 (142)
Q Consensus 79 G~i 81 (142)
..+
T Consensus 73 ~pv 75 (387)
T 1ny5_A 73 TEV 75 (387)
T ss_dssp SEE
T ss_pred CcE
Confidence 333
No 449
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=78.40 E-value=9.1 Score=28.21 Aligned_cols=75 Identities=13% Similarity=0.245 Sum_probs=48.6
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHH-HhhcccCCCceeEEEEcCCCcC-----------------
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQ-LLKYSENEGSFDYAFVDADKDN----------------- 63 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~-~~~~~~~~~~fD~IfiD~~~~~----------------- 63 (142)
|.++|+++.+++.-+.|+. ...++.+|..++... +.+ .+.+|+++..+++..
T Consensus 43 v~a~E~d~~a~~ty~~N~~------~~~~~~~DI~~i~~~~i~~----~~~~Dll~ggpPCQ~fS~ag~~r~g~~d~r~~ 112 (295)
T 2qrv_A 43 YIASEVCEDSITVGMVRHQ------GKIMYVGDVRSVTQKHIQE----WGPFDLVIGGSPCNDLSIVNPARKGLYEGTGR 112 (295)
T ss_dssp EEEECCCHHHHHHHHHHTT------TCEEEECCGGGCCHHHHHH----TCCCSEEEECCCCGGGBTTCTTCCTTTSTTTT
T ss_pred EEEEECCHHHHHHHHHhCC------CCceeCCChHHccHHHhcc----cCCcCEEEecCCCccccccCccccccccccch
Confidence 5899999999988887752 346788898775432 211 247999998764211
Q ss_pred -cHHHHHHHHhcccCCe------EEEEeccc
Q 032390 64 -YCNYHERLMKLLKVGG------IAVYDNTL 87 (142)
Q Consensus 64 -~~~~~~~~~~~L~~gG------~iv~dn~~ 87 (142)
+.++++ +.+.++|.. +++++|+-
T Consensus 113 L~~~~~r-ii~~~~P~~~~~~P~~~l~ENV~ 142 (295)
T 2qrv_A 113 LFFEFYR-LLHDARPKEGDDRPFFWLFENVV 142 (295)
T ss_dssp HHHHHHH-HHHHHSCCTTCCCCCEEEEEEES
T ss_pred hHHHHHH-HHHHhCcccccCCccEEEEEcCc
Confidence 223333 334566662 88999985
No 450
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=78.24 E-value=9.6 Score=23.52 Aligned_cols=64 Identities=9% Similarity=0.044 Sum_probs=42.5
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHhc
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMKL 74 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~~ 74 (142)
|..+|-++......+..++.. . .+. ...++.+.+..+. ...+|+|++|...+. -.++++.+.+.
T Consensus 4 Ilivdd~~~~~~~l~~~l~~~-~--~v~-~~~~~~~a~~~~~-----~~~~dlvl~D~~lp~~~g~~~~~~l~~~ 69 (139)
T 2jk1_A 4 ILLVDDEPHSLAAMKLALEDD-F--DVL-TAQGAEAAIAILE-----EEWVQVIICDQRMPGRTGVDFLTEVRER 69 (139)
T ss_dssp EEEECSSHHHHHHHHHHHTTT-S--CEE-EESSHHHHHHHHH-----HSCEEEEEEESCCSSSCHHHHHHHHHHH
T ss_pred EEEEcCCHHHHHHHHHHhhcC-c--eEE-EcCCHHHHHHHHh-----cCCCCEEEEeCCCCCCcHHHHHHHHHHh
Confidence 677899999888888888653 2 343 4566666666553 356999999975433 24455555543
No 451
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=77.53 E-value=3.3 Score=30.38 Aligned_cols=48 Identities=10% Similarity=0.053 Sum_probs=32.1
Q ss_pred EEEEEc-cHHHHHHHHhhcccCCCceeEEEEcCCCcC---------cHHHHHHHHhcccCCe-EEEEe
Q 032390 28 INFIES-EALSVLDQLLKYSENEGSFDYAFVDADKDN---------YCNYHERLMKLLKVGG-IAVYD 84 (142)
Q Consensus 28 v~~~~~-da~~~l~~~~~~~~~~~~fD~IfiD~~~~~---------~~~~~~~~~~~L~~gG-~iv~d 84 (142)
++++.+ |..+. .+.++|+|++|..... ....++.+.+.|+||| -+++.
T Consensus 124 i~~~~G~Df~~~---------~~~~~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvK 182 (269)
T 2px2_A 124 VTMKSGVDVFYK---------PSEISDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIK 182 (269)
T ss_dssp EEEECSCCGGGS---------CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred EEeeccCCccCC---------CCCCCCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEE
Confidence 355557 88762 2458999999974211 1124666778999999 77774
No 452
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=77.31 E-value=3.4 Score=30.33 Aligned_cols=70 Identities=10% Similarity=0.086 Sum_probs=39.8
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|++++.+++..+.+++ +|...-+.....+ .+.+..+ ..+.+|+|| |+.-. ..++.+.+.++++|.
T Consensus 176 ~vi~~~~~~~~~~~~~~----lGa~~~i~~~~~~-~~~~~~~-----~~~~~d~vi-d~~g~---~~~~~~~~~l~~~G~ 241 (328)
T 1xa0_A 176 TVEASTGKAAEHDYLRV----LGAKEVLAREDVM-AERIRPL-----DKQRWAAAV-DPVGG---RTLATVLSRMRYGGA 241 (328)
T ss_dssp CEEEEESCTTCHHHHHH----TTCSEEEECC----------C-----CSCCEEEEE-ECSTT---TTHHHHHHTEEEEEE
T ss_pred EEEEEECCHHHHHHHHH----cCCcEEEecCCcH-HHHHHHh-----cCCcccEEE-ECCcH---HHHHHHHHhhccCCE
Confidence 47888999888887764 5643212211111 1222222 134799987 44322 246778899999999
Q ss_pred EEEe
Q 032390 81 AVYD 84 (142)
Q Consensus 81 iv~d 84 (142)
++.-
T Consensus 242 ~v~~ 245 (328)
T 1xa0_A 242 VAVS 245 (328)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 8864
No 453
>1dc7_A NTRC, nitrogen regulation protein; receiver domain, phosphorylation, signal transduction, conformational rearrangement; NMR {Salmonella typhimurium} SCOP: c.23.1.1 PDB: 1j56_A 1krw_A 1krx_A 1ntr_A 1dc8_A*
Probab=77.04 E-value=2.7 Score=25.33 Aligned_cols=54 Identities=15% Similarity=0.089 Sum_probs=38.6
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD 62 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~ 62 (142)
+|..+|-++...+..+..++..|.. +. ...++.+.+..+. ...+|+|++|...+
T Consensus 5 ~ilivdd~~~~~~~l~~~l~~~~~~--v~-~~~~~~~~~~~~~-----~~~~dlvi~d~~~~ 58 (124)
T 1dc7_A 5 IVWVVDDDSSIRWVLERALAGAGLT--CT-TFENGNEVLAALA-----SKTPDVLLSDIRMP 58 (124)
T ss_dssp CCEEECSSSSHHHHHHHHHTTTTCC--CE-ECCCTTHHHHHSS-----SCCCSCEEECSCSS
T ss_pred EEEEEeCCHHHHHHHHHHHHhCCcE--EE-EeCCHHHHHHHHh-----cCCCCEEEEeeecC
Confidence 3567888999999999988876653 43 4455666665542 45799999998654
No 454
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=76.33 E-value=1.4 Score=32.33 Aligned_cols=68 Identities=12% Similarity=0.143 Sum_probs=42.6
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|++++.+++..+.+++ +|... ++...-.+.+..+ ..+.+|+|| |+.- ...++.+.+.|+++|.
T Consensus 173 ~Vi~~~~~~~~~~~~~~----lGa~~---vi~~~~~~~~~~~-----~~~~~d~v~-d~~g---~~~~~~~~~~l~~~G~ 236 (324)
T 3nx4_A 173 QVAAVSGRESTHGYLKS----LGANR---ILSRDEFAESRPL-----EKQLWAGAI-DTVG---DKVLAKVLAQMNYGGC 236 (324)
T ss_dssp CEEEEESCGGGHHHHHH----HTCSE---EEEGGGSSCCCSS-----CCCCEEEEE-ESSC---HHHHHHHHHTEEEEEE
T ss_pred EEEEEeCCHHHHHHHHh----cCCCE---EEecCCHHHHHhh-----cCCCccEEE-ECCC---cHHHHHHHHHHhcCCE
Confidence 57889999998888875 45432 1211111111111 135799877 5542 2378889999999999
Q ss_pred EEEe
Q 032390 81 AVYD 84 (142)
Q Consensus 81 iv~d 84 (142)
++.-
T Consensus 237 iv~~ 240 (324)
T 3nx4_A 237 VAAC 240 (324)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 9863
No 455
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=76.31 E-value=2.3 Score=31.58 Aligned_cols=70 Identities=19% Similarity=0.133 Sum_probs=43.4
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcE-EEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCe
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKI-NFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGG 79 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v-~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG 79 (142)
+|++++.+++..+.+++. . +.+ .....+..+.+..+. ...+|+||--.. ....++.+.+.|+++|
T Consensus 191 ~Vi~~~~~~~~~~~~~~l---a---~~v~~~~~~~~~~~~~~~~-----~~g~D~vid~~g---~~~~~~~~~~~l~~~G 256 (343)
T 2dq4_A 191 PILVSDPNPYRLAFARPY---A---DRLVNPLEEDLLEVVRRVT-----GSGVEVLLEFSG---NEAAIHQGLMALIPGG 256 (343)
T ss_dssp SEEEECSCHHHHGGGTTT---C---SEEECTTTSCHHHHHHHHH-----SSCEEEEEECSC---CHHHHHHHHHHEEEEE
T ss_pred EEEEECCCHHHHHHHHHh---H---HhccCcCccCHHHHHHHhc-----CCCCCEEEECCC---CHHHHHHHHHHHhcCC
Confidence 478899998888777653 1 111 111123334444431 346999984332 3456788899999999
Q ss_pred EEEEe
Q 032390 80 IAVYD 84 (142)
Q Consensus 80 ~iv~d 84 (142)
.++.-
T Consensus 257 ~iv~~ 261 (343)
T 2dq4_A 257 EARIL 261 (343)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 98763
No 456
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=76.00 E-value=4.9 Score=30.16 Aligned_cols=73 Identities=12% Similarity=0.188 Sum_probs=47.1
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHH-HhhcccCCCceeEEEEcCCCcC-----------------
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQ-LLKYSENEGSFDYAFVDADKDN----------------- 63 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~-~~~~~~~~~~fD~IfiD~~~~~----------------- 63 (142)
|.++|+|+.+++.-+.|+.. ..++.+|..++... +. ...+|+++..+++..
T Consensus 30 v~a~e~d~~a~~ty~~N~~~------~~~~~~DI~~~~~~~~~-----~~~~D~l~ggpPCQ~fS~ag~~~~~~d~r~~L 98 (333)
T 4h0n_A 30 VAAVDINTVANSVYKHNFPE------TNLLNRNIQQLTPQVIK-----KWNVDTILMSPPCQPFTRNGKYLDDNDPRTNS 98 (333)
T ss_dssp EEEECCCHHHHHHHHHHCTT------SCEECCCGGGCCHHHHH-----HTTCCEEEECCCCCCSEETTEECCTTCTTSCC
T ss_pred EEEEeCCHHHHHHHHHhCCC------CceeccccccCCHHHhc-----cCCCCEEEecCCCcchhhhhhccCCcCccccc
Confidence 57999999999999888732 34667787665322 21 236999998765321
Q ss_pred cHHHHHHHHhccc-CCeEEEEeccc
Q 032390 64 YCNYHERLMKLLK-VGGIAVYDNTL 87 (142)
Q Consensus 64 ~~~~~~~~~~~L~-~gG~iv~dn~~ 87 (142)
+.++++ +.+.++ |. .++++|+-
T Consensus 99 ~~~~~r-~i~~~~~P~-~~vlENV~ 121 (333)
T 4h0n_A 99 FLYLIG-ILDQLDNVD-YILMENVK 121 (333)
T ss_dssp HHHHHH-HGGGCTTCC-EEEEEECT
T ss_pred HHHHHH-HHHHhcCCC-EEEEecch
Confidence 233333 334555 75 77888885
No 457
>1qo0_D AMIR; binding protein, gene regulator, receptor; 2.25A {Pseudomonas aeruginosa} SCOP: c.23.1.3
Probab=75.79 E-value=11 Score=25.04 Aligned_cols=53 Identities=8% Similarity=0.081 Sum_probs=36.0
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHH
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCN 66 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~ 66 (142)
|..+|-++......+..+...|+. +.. ..+..+.+ ...+|+|++|...+....
T Consensus 15 iLivdd~~~~~~~l~~~L~~~g~~--v~~-~~~~~~al---------~~~~dlvl~D~~mp~~~g 67 (196)
T 1qo0_D 15 VLVLNPPGEVSDALVLQLIRIGCS--VRQ-CWPPPEAF---------DVPVDVVFTSIFQNRHHD 67 (196)
T ss_dssp EEEESCTTHHHHHHHHHHHHHTCE--EEE-ECSCCSSC---------SSCCSEEEEECCSSTHHH
T ss_pred EEEEcCChhHHHHHHHHHHHcCCe--EEE-ecCchhhC---------CCCCCEEEEeCCCCccch
Confidence 678899999999999999887762 332 22222221 347999999987654433
No 458
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=75.69 E-value=3.1 Score=30.69 Aligned_cols=36 Identities=14% Similarity=0.107 Sum_probs=26.1
Q ss_pred CCceeEEEEcCCCc-C--c------HHHHHHHHhcccCC-eEEEEe
Q 032390 49 EGSFDYAFVDADKD-N--Y------CNYHERLMKLLKVG-GIAVYD 84 (142)
Q Consensus 49 ~~~fD~IfiD~~~~-~--~------~~~~~~~~~~L~~g-G~iv~d 84 (142)
+++||+|++|.... . + ..+++.+.+.|+|| |.+|+.
T Consensus 138 ~~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~K 183 (277)
T 3evf_A 138 PVKCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVK 183 (277)
T ss_dssp CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CCCccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEE
Confidence 57899999997432 1 1 12356677899999 999984
No 459
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=75.54 E-value=15 Score=27.59 Aligned_cols=67 Identities=18% Similarity=0.246 Sum_probs=42.3
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeEE
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIA 81 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~i 81 (142)
|++++.+++..+.+++ +|.. .++...-.+++..+ .+.+|+||--.... ..++.+.+.|+++|.+
T Consensus 221 Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~------~~g~Dvvid~~g~~---~~~~~~~~~l~~~G~i 284 (369)
T 1uuf_A 221 VVAFTTSEAKREAAKA----LGAD---EVVNSRNADEMAAH------LKSFDFILNTVAAP---HNLDDFTTLLKRDGTM 284 (369)
T ss_dssp EEEEESSGGGHHHHHH----HTCS---EEEETTCHHHHHTT------TTCEEEEEECCSSC---CCHHHHHTTEEEEEEE
T ss_pred EEEEeCCHHHHHHHHH----cCCc---EEeccccHHHHHHh------hcCCCEEEECCCCH---HHHHHHHHHhccCCEE
Confidence 7889999999888875 4543 22222222334433 25799998433321 2356778999999998
Q ss_pred EEe
Q 032390 82 VYD 84 (142)
Q Consensus 82 v~d 84 (142)
+.-
T Consensus 285 v~~ 287 (369)
T 1uuf_A 285 TLV 287 (369)
T ss_dssp EEC
T ss_pred EEe
Confidence 863
No 460
>1dcf_A ETR1 protein; beta-alpha five sandwich, transferase; 2.50A {Arabidopsis thaliana} SCOP: c.23.1.2
Probab=75.32 E-value=12 Score=22.97 Aligned_cols=63 Identities=13% Similarity=0.131 Sum_probs=42.4
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHH
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLM 72 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~ 72 (142)
+|..+|-++...+..+..++..|. .+. ...++.+.+..+. ..+ |+|++|...+. -.++++.+.
T Consensus 9 ~ILivdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~a~~~~~-----~~~-dlvllD~~lp~~~g~~~~~~l~ 73 (136)
T 1dcf_A 9 KVLVMDENGVSRMVTKGLLVHLGC--EVT-TVSSNEECLRVVS-----HEH-KVVFMDVCMPGVENYQIALRIH 73 (136)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTC--EEE-EESSHHHHHHHCC-----TTC-SEEEEECCSSTTTTTHHHHHHH
T ss_pred eEEEEeCCHHHHHHHHHHHHHcCC--eEE-EeCCHHHHHHHHh-----ccC-CEEEEeCCCCCCcHHHHHHHHH
Confidence 367889999999999999988765 343 5566777666542 334 99999975432 234455554
No 461
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=75.03 E-value=11 Score=29.00 Aligned_cols=70 Identities=10% Similarity=0.027 Sum_probs=45.7
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHH--HHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVG 78 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~--~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~g 78 (142)
.|+.||.|++.++.+++ .| +.++.||+.+ .|... .-...|+|++-.+........-...+.+.|+
T Consensus 29 ~vvvId~d~~~v~~~~~----~g----~~vi~GDat~~~~L~~a-----gi~~A~~viv~~~~~~~n~~i~~~ar~~~p~ 95 (413)
T 3l9w_A 29 KMVVLDHDPDHIETLRK----FG----MKVFYGDATRMDLLESA-----GAAKAEVLINAIDDPQTNLQLTEMVKEHFPH 95 (413)
T ss_dssp CEEEEECCHHHHHHHHH----TT----CCCEESCTTCHHHHHHT-----TTTTCSEEEECCSSHHHHHHHHHHHHHHCTT
T ss_pred CEEEEECCHHHHHHHHh----CC----CeEEEcCCCCHHHHHhc-----CCCccCEEEECCCChHHHHHHHHHHHHhCCC
Confidence 47899999999988764 23 5688999864 44443 1357999998665432222233344567788
Q ss_pred eEEEE
Q 032390 79 GIAVY 83 (142)
Q Consensus 79 G~iv~ 83 (142)
..|++
T Consensus 96 ~~Iia 100 (413)
T 3l9w_A 96 LQIIA 100 (413)
T ss_dssp CEEEE
T ss_pred CeEEE
Confidence 77765
No 462
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=74.29 E-value=10 Score=28.46 Aligned_cols=70 Identities=11% Similarity=0.214 Sum_probs=42.0
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcc-cCCeE
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLL-KVGGI 80 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L-~~gG~ 80 (142)
|+++ .+++..+.++ .+|...-+.....+..+.+..+. ++.+|+|| |+.- -...++.+.+.| ++||.
T Consensus 192 Vi~~-~~~~~~~~~~----~lGa~~vi~~~~~~~~~~v~~~t-----~g~~d~v~-d~~g--~~~~~~~~~~~l~~~~G~ 258 (371)
T 3gqv_A 192 PIAT-CSPHNFDLAK----SRGAEEVFDYRAPNLAQTIRTYT-----KNNLRYAL-DCIT--NVESTTFCFAAIGRAGGH 258 (371)
T ss_dssp EEEE-ECGGGHHHHH----HTTCSEEEETTSTTHHHHHHHHT-----TTCCCEEE-ESSC--SHHHHHHHHHHSCTTCEE
T ss_pred EEEE-eCHHHHHHHH----HcCCcEEEECCCchHHHHHHHHc-----cCCccEEE-ECCC--chHHHHHHHHHhhcCCCE
Confidence 4555 3777777665 45653223333344444455442 34599998 4432 345678888888 69999
Q ss_pred EEEe
Q 032390 81 AVYD 84 (142)
Q Consensus 81 iv~d 84 (142)
++.-
T Consensus 259 iv~~ 262 (371)
T 3gqv_A 259 YVSL 262 (371)
T ss_dssp EEES
T ss_pred EEEE
Confidence 8864
No 463
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=74.05 E-value=1.4 Score=29.54 Aligned_cols=58 Identities=5% Similarity=0.048 Sum_probs=32.9
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEE-EEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYA-FVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~I-fiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
|+++|++|..++ ++++|..+....+ -+.||+| -+.++.+-.+..++ +.+.+ |.-
T Consensus 62 V~atDInp~Av~----------------~v~dDiF~P~~~~------Y~~~DLIYsirPP~El~~~i~~-lA~~v--~ad 116 (153)
T 2k4m_A 62 LVLTDIKPSHGG----------------IVRDDITSPRMEI------YRGAALIYSIRPPAEIHSSLMR-VADAV--GAR 116 (153)
T ss_dssp EEEECSSCSSTT----------------EECCCSSSCCHHH------HTTEEEEEEESCCTTTHHHHHH-HHHHH--TCE
T ss_pred EEEEECCccccc----------------eEEccCCCCcccc------cCCcCEEEEcCCCHHHHHHHHH-HHHHc--CCC
Confidence 566666666554 7888876633222 2489999 46776554444444 43433 444
Q ss_pred EEEe
Q 032390 81 AVYD 84 (142)
Q Consensus 81 iv~d 84 (142)
+++.
T Consensus 117 liI~ 120 (153)
T 2k4m_A 117 LIIK 120 (153)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4443
No 464
>3klo_A Transcriptional regulator VPST; REC domain, HTH domain, DNA-binding, transcription regulation; HET: C2E TAR; 2.80A {Vibrio cholerae} PDB: 3kln_A*
Probab=73.58 E-value=8.1 Score=26.38 Aligned_cols=76 Identities=5% Similarity=-0.042 Sum_probs=44.2
Q ss_pred CEEEEeCChhHHHHHHHHHHHc-CCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCc--HHHHHHHHhcccC
Q 032390 1 MITAIDVNRETYEIGLPIIKKA-GVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNY--CNYHERLMKLLKV 77 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~-~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~--~~~~~~~~~~L~~ 77 (142)
+|..+|-++...+..+..++.. |+ .+.....+..+.+.... ...++|+|++|...+.. .++++.+.+...|
T Consensus 9 ~IlivdD~~~~~~~l~~~L~~~~~~--~v~~~~~~~~~~~~~~~----~~~~~dlvllD~~mp~~~G~~~~~~lr~~~~~ 82 (225)
T 3klo_A 9 NVRMLSDVCMQSRLLKEALESKLPL--ALEITPFSELWLEENKP----ESRSIQMLVIDYSRISDDVLTDYSSFKHISCP 82 (225)
T ss_dssp EEEEESCCSHHHHHHHHHHHHHSSE--EEEEECGGGHHHHTTCS----GGGGCCEEEEEGGGCCHHHHHHHHHHHHHHCT
T ss_pred EEEEEcCcHHHHHHHHHHHhhCCCc--eEEEEeCCcHHHHHHHh----hccCCCEEEEeCCCCCCCHHHHHHHHHHhhCC
Confidence 3678999999999999999853 32 23223344444333211 14579999999765442 3344444431335
Q ss_pred CeEEE
Q 032390 78 GGIAV 82 (142)
Q Consensus 78 gG~iv 82 (142)
+..++
T Consensus 83 ~~~ii 87 (225)
T 3klo_A 83 DAKEV 87 (225)
T ss_dssp TCEEE
T ss_pred CCcEE
Confidence 54443
No 465
>3luf_A Two-component system response regulator/ggdef domain protein; structural genomics, ASA_2441, PSI-2, protein structure initiative; HET: MSE; 1.76A {Aeromonas salmonicida} PDB: 3mf4_A*
Probab=71.30 E-value=24 Score=24.83 Aligned_cols=65 Identities=15% Similarity=0.145 Sum_probs=43.9
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHh
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMK 73 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~ 73 (142)
|..+|-++......+..++..|. .+ ....++.+.+..+.. ...||+|++|-..+. -.++++.+.+
T Consensus 127 ILivDD~~~~~~~l~~~L~~~~~--~v-~~a~~~~eal~~l~~----~~~~dlvllD~~mP~~dG~~l~~~lr~ 193 (259)
T 3luf_A 127 VLVVDDSRTSRHRTMAQLRKQLL--QV-HEASHAREALATLEQ----HPAIRLVLVDYYMPEIDGISLVRMLRE 193 (259)
T ss_dssp EEEECSCHHHHHHHHHHHHTTTC--EE-EEESSHHHHHHHHHH----CTTEEEEEECSCCSSSCHHHHHHHHHH
T ss_pred EEEEeCCHHHHHHHHHHHHHcCc--EE-EEeCCHHHHHHHHhc----CCCCCEEEEcCCCCCCCHHHHHHHHHh
Confidence 67788889888888888887654 23 345677777766532 235999999976543 2345555554
No 466
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=71.12 E-value=14 Score=26.68 Aligned_cols=65 Identities=20% Similarity=0.220 Sum_probs=41.8
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccH-HHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCe
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEA-LSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGG 79 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da-~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG 79 (142)
+|++++.+++..+.+++ +|.. . ++..+- .++.+.+ +.+|+||- ... ..++.+.+.|+++|
T Consensus 152 ~Vi~~~~~~~~~~~~~~----~ga~-~--~~~~~~~~~~~~~~-------~~~d~vid-~g~----~~~~~~~~~l~~~G 212 (302)
T 1iz0_A 152 RVLAAASRPEKLALPLA----LGAE-E--AATYAEVPERAKAW-------GGLDLVLE-VRG----KEVEESLGLLAHGG 212 (302)
T ss_dssp EEEEEESSGGGSHHHHH----TTCS-E--EEEGGGHHHHHHHT-------TSEEEEEE-CSC----TTHHHHHTTEEEEE
T ss_pred EEEEEeCCHHHHHHHHh----cCCC-E--EEECCcchhHHHHh-------cCceEEEE-CCH----HHHHHHHHhhccCC
Confidence 37888999888887754 4542 2 222221 2333322 46999996 543 35778889999999
Q ss_pred EEEEe
Q 032390 80 IAVYD 84 (142)
Q Consensus 80 ~iv~d 84 (142)
.++.-
T Consensus 213 ~~v~~ 217 (302)
T 1iz0_A 213 RLVYI 217 (302)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 98763
No 467
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=71.11 E-value=19 Score=23.69 Aligned_cols=72 Identities=13% Similarity=0.160 Sum_probs=40.2
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHH--HHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVG 78 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~--~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~g 78 (142)
+|+.+|.+++.++.+++ .| +.++.+|+.+ .+.... .-..+|+|++-.+........-...+.+.|+
T Consensus 65 ~V~vid~~~~~~~~~~~----~g----~~~~~gd~~~~~~l~~~~----~~~~ad~vi~~~~~~~~~~~~~~~~~~~~~~ 132 (183)
T 3c85_A 65 ISLGIEIREEAAQQHRS----EG----RNVISGDATDPDFWERIL----DTGHVKLVLLAMPHHQGNQTALEQLQRRNYK 132 (183)
T ss_dssp CEEEEESCHHHHHHHHH----TT----CCEEECCTTCHHHHHTBC----SCCCCCEEEECCSSHHHHHHHHHHHHHTTCC
T ss_pred eEEEEECCHHHHHHHHH----CC----CCEEEcCCCCHHHHHhcc----CCCCCCEEEEeCCChHHHHHHHHHHHHHCCC
Confidence 47899999988776553 23 4567777643 333210 1246999998554322111122233455667
Q ss_pred eEEEEe
Q 032390 79 GIAVYD 84 (142)
Q Consensus 79 G~iv~d 84 (142)
+.+++.
T Consensus 133 ~~ii~~ 138 (183)
T 3c85_A 133 GQIAAI 138 (183)
T ss_dssp SEEEEE
T ss_pred CEEEEE
Confidence 777763
No 468
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=71.06 E-value=4.9 Score=29.95 Aligned_cols=36 Identities=11% Similarity=0.027 Sum_probs=26.7
Q ss_pred CCceeEEEEcCCCc-C------c--HHHHHHHHhcccCC-eEEEEe
Q 032390 49 EGSFDYAFVDADKD-N------Y--CNYHERLMKLLKVG-GIAVYD 84 (142)
Q Consensus 49 ~~~fD~IfiD~~~~-~------~--~~~~~~~~~~L~~g-G~iv~d 84 (142)
++++|+|++|.... . + ..+++.+.+.|+|| |.+|+.
T Consensus 145 ~~~~DlVlsD~APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~K 190 (300)
T 3eld_A 145 TEPSDTLLCDIGESSSNPLVERDRTMKVLENFERWKHVNTENFCVK 190 (300)
T ss_dssp CCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEE
T ss_pred CCCcCEEeecCcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEE
Confidence 56899999997532 1 1 23466677899999 999986
No 469
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=70.65 E-value=15 Score=27.68 Aligned_cols=72 Identities=4% Similarity=-0.028 Sum_probs=44.6
Q ss_pred CEEEEeCChhHHHHHHHHHHH------cCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhc
Q 032390 1 MITAIDVNRETYEIGLPIIKK------AGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKL 74 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~------~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~ 74 (142)
+|+.++.+++.++..++.-.. ..+.+++++. .|..+.+ ...|+|++-.+.....+.++.+.+.
T Consensus 54 ~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t-~d~~ea~----------~~aDvVilaVp~~~~~~vl~~i~~~ 122 (356)
T 3k96_A 54 KVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAY-CDLKASL----------EGVTDILIVVPSFAFHEVITRMKPL 122 (356)
T ss_dssp CEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEE-SCHHHHH----------TTCCEEEECCCHHHHHHHHHHHGGG
T ss_pred eEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEE-CCHHHHH----------hcCCEEEECCCHHHHHHHHHHHHHh
Confidence 478889998887766653211 1122234432 3433322 3589999977655556677778888
Q ss_pred ccCCeEEEE
Q 032390 75 LKVGGIAVY 83 (142)
Q Consensus 75 L~~gG~iv~ 83 (142)
++++.+++.
T Consensus 123 l~~~~ivvs 131 (356)
T 3k96_A 123 IDAKTRIAW 131 (356)
T ss_dssp CCTTCEEEE
T ss_pred cCCCCEEEE
Confidence 888887654
No 470
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=70.57 E-value=7.3 Score=28.80 Aligned_cols=64 Identities=14% Similarity=0.193 Sum_probs=41.0
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHH-HHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS-VLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~-~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
|+.+|.+++.++.+++ .|..+. ...+..+ . -...|+||+-.+.....+.++.+.+.+++|.+
T Consensus 61 V~~~dr~~~~~~~a~~----~G~~~~---~~~~~~~~~----------~~~aDvVilavp~~~~~~vl~~l~~~l~~~~i 123 (314)
T 3ggo_A 61 IYGYDINPESISKAVD----LGIIDE---GTTSIAKVE----------DFSPDFVMLSSPVRTFREIAKKLSYILSEDAT 123 (314)
T ss_dssp EEEECSCHHHHHHHHH----TTSCSE---EESCTTGGG----------GGCCSEEEECSCGGGHHHHHHHHHHHSCTTCE
T ss_pred EEEEECCHHHHHHHHH----CCCcch---hcCCHHHHh----------hccCCEEEEeCCHHHHHHHHHHHhhccCCCcE
Confidence 6788888887766553 343221 1223222 1 13589999987766667788888888888876
Q ss_pred EE
Q 032390 81 AV 82 (142)
Q Consensus 81 iv 82 (142)
|+
T Consensus 124 v~ 125 (314)
T 3ggo_A 124 VT 125 (314)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 471
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=70.44 E-value=7.3 Score=30.18 Aligned_cols=71 Identities=13% Similarity=0.072 Sum_probs=42.7
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccH-----------------HHHHHHHhhcccCCCceeEEEEcCCCcCc
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEA-----------------LSVLDQLLKYSENEGSFDYAFVDADKDNY 64 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da-----------------~~~l~~~~~~~~~~~~fD~IfiD~~~~~~ 64 (142)
+++++.+++..+.+++ +|...-+.....|. .+.+..+. ....+|+|| |+.-
T Consensus 256 vi~~~~~~~~~~~~~~----lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~t----~g~g~Dvvi-d~~G--- 323 (456)
T 3krt_A 256 PICVVSSPQKAEICRA----MGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELT----GGEDIDIVF-EHPG--- 323 (456)
T ss_dssp EEEEESSHHHHHHHHH----HTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHHH----TSCCEEEEE-ECSC---
T ss_pred EEEEECCHHHHHHHHh----hCCcEEEecCcCcccccccccccchHHHHHHHHHHHHHh----CCCCCcEEE-EcCC---
Confidence 6777888888888764 45432121111111 12333332 235799887 4432
Q ss_pred HHHHHHHHhcccCCeEEEEe
Q 032390 65 CNYHERLMKLLKVGGIAVYD 84 (142)
Q Consensus 65 ~~~~~~~~~~L~~gG~iv~d 84 (142)
...++.+.+.|+++|.++.-
T Consensus 324 ~~~~~~~~~~l~~~G~iv~~ 343 (456)
T 3krt_A 324 RETFGASVFVTRKGGTITTC 343 (456)
T ss_dssp HHHHHHHHHHEEEEEEEEES
T ss_pred chhHHHHHHHhhCCcEEEEE
Confidence 25688888999999999863
No 472
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=69.56 E-value=13 Score=26.03 Aligned_cols=64 Identities=17% Similarity=0.224 Sum_probs=38.0
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeEE
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIA 81 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~i 81 (142)
|+.+|.+++..+.+++.. |. +. ..+..+.+ ...|+||+-.+.....+.++.+.+.+++|.++
T Consensus 32 V~~~~r~~~~~~~~~~~~---g~----~~-~~~~~e~~----------~~aDvVilav~~~~~~~v~~~l~~~l~~~~~v 93 (247)
T 3gt0_A 32 IICSDLNTANLKNASEKY---GL----TT-TTDNNEVA----------KNADILILSIKPDLYASIINEIKEIIKNDAII 93 (247)
T ss_dssp EEEECSCHHHHHHHHHHH---CC----EE-CSCHHHHH----------HHCSEEEECSCTTTHHHHC---CCSSCTTCEE
T ss_pred EEEEeCCHHHHHHHHHHh---CC----EE-eCChHHHH----------HhCCEEEEEeCHHHHHHHHHHHHhhcCCCCEE
Confidence 667788887766655432 32 21 23333332 24799998765455667777777788888877
Q ss_pred EE
Q 032390 82 VY 83 (142)
Q Consensus 82 v~ 83 (142)
+.
T Consensus 94 vs 95 (247)
T 3gt0_A 94 VT 95 (247)
T ss_dssp EE
T ss_pred EE
Confidence 74
No 473
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=69.53 E-value=11 Score=29.02 Aligned_cols=32 Identities=16% Similarity=0.056 Sum_probs=23.8
Q ss_pred CCceeEEEEcCCCcCcHHHHHHHHhcccCCeEEEEe
Q 032390 49 EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 84 (142)
Q Consensus 49 ~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~iv~d 84 (142)
...+|+||--.. ...++.+.+.|++||.++.-
T Consensus 304 g~g~Dvvid~~G----~~~~~~~~~~l~~~G~iv~~ 335 (447)
T 4a0s_A 304 GREPDIVFEHTG----RVTFGLSVIVARRGGTVVTC 335 (447)
T ss_dssp SSCCSEEEECSC----HHHHHHHHHHSCTTCEEEES
T ss_pred CCCceEEEECCC----chHHHHHHHHHhcCCEEEEE
Confidence 457999984333 24678888999999998864
No 474
>1p2f_A Response regulator; DRRB, OMPR/PHOB, transcription; HET: MSE; 1.80A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nns_A*
Probab=68.70 E-value=24 Score=23.70 Aligned_cols=70 Identities=9% Similarity=0.068 Sum_probs=44.5
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHhcccCC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMKLLKVG 78 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~~L~~g 78 (142)
+|..+|-++...+..+..++..| .+ ....++.+.+..+ ..+|+|++|...+. -.++++.+.+.- |+
T Consensus 4 ~ilivdd~~~~~~~l~~~L~~~~---~v-~~~~~~~~al~~~-------~~~dlvllD~~lp~~~g~~~~~~lr~~~-~~ 71 (220)
T 1p2f_A 4 KIAVVDDDKNILKKVSEKLQQLG---RV-KTFLTGEDFLNDE-------EAFHVVVLDVMLPDYSGYEICRMIKETR-PE 71 (220)
T ss_dssp EEEEECSCHHHHHHHHHHHTTTE---EE-EEESSHHHHHHCC-------SCCSEEEEESBCSSSBHHHHHHHHHHHC-TT
T ss_pred eEEEEeCCHHHHHHHHHHHHhCC---CE-EEECCHHHHHHhc-------CCCCEEEEeCCCCCCCHHHHHHHHHhcC-CC
Confidence 36788999999999999887664 23 3445666655432 57999999975432 344555555433 44
Q ss_pred eEEE
Q 032390 79 GIAV 82 (142)
Q Consensus 79 G~iv 82 (142)
..++
T Consensus 72 ~~ii 75 (220)
T 1p2f_A 72 TWVI 75 (220)
T ss_dssp SEEE
T ss_pred CcEE
Confidence 4433
No 475
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=68.63 E-value=24 Score=27.52 Aligned_cols=74 Identities=12% Similarity=0.076 Sum_probs=43.5
Q ss_pred CEEEEeCChhHHHHHHHHH------------HHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc------
Q 032390 1 MITAIDVNRETYEIGLPII------------KKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD------ 62 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~------------~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~------ 62 (142)
+|+++|++++.++..++.. +..-...++++. .|..+.+ ...|+||+-.+.+
T Consensus 27 ~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t-~d~~ea~----------~~aDvViiaVptp~~~~~~ 95 (450)
T 3gg2_A 27 NVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFG-TEIEQAV----------PEADIIFIAVGTPAGEDGS 95 (450)
T ss_dssp EEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEE-SCHHHHG----------GGCSEEEECCCCCBCTTSS
T ss_pred EEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEE-CCHHHHH----------hcCCEEEEEcCCCcccCCC
Confidence 3789999999888766521 000001234432 3333321 3579999865443
Q ss_pred ----CcHHHHHHHHhcccCCeEEEEec
Q 032390 63 ----NYCNYHERLMKLLKVGGIAVYDN 85 (142)
Q Consensus 63 ----~~~~~~~~~~~~L~~gG~iv~dn 85 (142)
.....++.+.+.|++|.+|+...
T Consensus 96 ~dl~~v~~v~~~i~~~l~~g~iVV~~S 122 (450)
T 3gg2_A 96 ADMSYVLDAARSIGRAMSRYILIVTKS 122 (450)
T ss_dssp BCCHHHHHHHHHHHHHCCSCEEEEECS
T ss_pred cChHHHHHHHHHHHhhCCCCCEEEEee
Confidence 34556677778888887776643
No 476
>1a2o_A CHEB methylesterase; bacterial chemotaxis, adaptation, serine hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.23.1.1 c.40.1.1
Probab=68.13 E-value=32 Score=25.67 Aligned_cols=75 Identities=16% Similarity=0.178 Sum_probs=48.2
Q ss_pred CEEEEeCChhHHHHHHHHHHHc-CCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC--cHHHHHHHHhcccC
Q 032390 1 MITAIDVNRETYEIGLPIIKKA-GVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--YCNYHERLMKLLKV 77 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~-~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~--~~~~~~~~~~~L~~ 77 (142)
+|..+|-++...+..+..++.. ++ .+-....+..+.+..+. ..++|+|++|...+. -.++++.+.+. .|
T Consensus 5 rVLIVDD~~~~r~~L~~~L~~~~g~--~vv~~a~~~~eAl~~l~-----~~~pDlVllDi~mp~~dGlell~~l~~~-~p 76 (349)
T 1a2o_A 5 RVLSVDDSALMRQIMTEIINSHSDM--EMVATAPDPLVARDLIK-----KFNPDVLTLDVEMPRMDGLDFLEKLMRL-RP 76 (349)
T ss_dssp EEEEECSCHHHHHHHHHHHHTSTTE--EEEEEESSHHHHHHHHH-----HHCCSEEEEECCCSSSCHHHHHHHHHHS-SC
T ss_pred EEEEEECCHHHHHHHHHHHhcCCCc--EEEEEeCCHHHHHHHHh-----ccCCCEEEEECCCCCCCHHHHHHHHHhc-CC
Confidence 3678999999999999988775 32 22235566666666553 346999999976443 34556666543 34
Q ss_pred CeEEEE
Q 032390 78 GGIAVY 83 (142)
Q Consensus 78 gG~iv~ 83 (142)
--+|++
T Consensus 77 ~pVIvl 82 (349)
T 1a2o_A 77 MPVVMV 82 (349)
T ss_dssp CCEEEE
T ss_pred CcEEEE
Confidence 344544
No 477
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=68.06 E-value=30 Score=27.13 Aligned_cols=73 Identities=11% Similarity=0.101 Sum_probs=42.2
Q ss_pred CEEEEeCChhHHHHHHHHHHHc---CC---------CCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC-------
Q 032390 1 MITAIDVNRETYEIGLPIIKKA---GV---------DHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK------- 61 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~---~~---------~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~------- 61 (142)
+|+++|++++.++..++..... |+ ..++++. .|..+.+ ...|+||+--+.
T Consensus 33 ~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~t-td~~~a~----------~~aDvviiaVptp~~~~~~ 101 (478)
T 2y0c_A 33 DVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFS-TDIEAAV----------AHGDVQFIAVGTPPDEDGS 101 (478)
T ss_dssp EEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEE-CCHHHHH----------HHCSEEEECCCCCBCTTSS
T ss_pred EEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEE-CCHHHHh----------hcCCEEEEEeCCCcccCCC
Confidence 3789999999888776531000 10 1123332 2332222 257999986543
Q ss_pred ---cCcHHHHHHHHhcccCCeEEEEe
Q 032390 62 ---DNYCNYHERLMKLLKVGGIAVYD 84 (142)
Q Consensus 62 ---~~~~~~~~~~~~~L~~gG~iv~d 84 (142)
......++.+.+.|++|.+|+..
T Consensus 102 ~dl~~v~~v~~~i~~~l~~~~iVV~~ 127 (478)
T 2y0c_A 102 ADLQYVLAAARNIGRYMTGFKVIVDK 127 (478)
T ss_dssp BCCHHHHHHHHHHHHHCCSCEEEEEC
T ss_pred ccHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 23345566677789888877654
No 478
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=67.82 E-value=20 Score=26.52 Aligned_cols=32 Identities=13% Similarity=0.103 Sum_probs=21.8
Q ss_pred CCceeEEEEcCCCcCcHHHHHHHHhcccCCeEEEEe
Q 032390 49 EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 84 (142)
Q Consensus 49 ~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~iv~d 84 (142)
...+|+|| |+.- -.... .+.+.|+++|.++.-
T Consensus 243 ~~g~Dvvi-d~~G--~~~~~-~~~~~l~~~G~~v~~ 274 (364)
T 1gu7_A 243 GGEAKLAL-NCVG--GKSST-GIARKLNNNGLMLTY 274 (364)
T ss_dssp TCCEEEEE-ESSC--HHHHH-HHHHTSCTTCEEEEC
T ss_pred CCCceEEE-ECCC--chhHH-HHHHHhccCCEEEEe
Confidence 34799998 4432 23333 667999999998864
No 479
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=67.82 E-value=23 Score=26.80 Aligned_cols=71 Identities=11% Similarity=0.093 Sum_probs=46.9
Q ss_pred EEEeCChhHHHHHHHHHHHcCCCC-cEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc--CcHHHHHHHHhcccCCe
Q 032390 3 TAIDVNRETYEIGLPIIKKAGVDH-KINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD--NYCNYHERLMKLLKVGG 79 (142)
Q Consensus 3 ~~ve~~~~~~~~a~~~~~~~~~~~-~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~--~~~~~~~~~~~~L~~gG 79 (142)
+++.-|--....++.|++.+++.+ .+++... .+ . ....||+|++--++. .....+..+...|++|+
T Consensus 62 ~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~--~~---~------~~~~~~~v~~~lpk~~~~l~~~L~~l~~~l~~~~ 130 (375)
T 4dcm_A 62 YSIGDSYISELATRENLRLNGIDESSVKFLDS--TA---D------YPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDT 130 (375)
T ss_dssp EEEESCHHHHHHHHHHHHHTTCCGGGSEEEET--TS---C------CCSSCSEEEEECCSCHHHHHHHHHHHHTTCCTTS
T ss_pred eEEEhHHHHHHHHHHHHHHcCCCccceEeccc--cc---c------cccCCCEEEEEcCCCHHHHHHHHHHHHhhCCCCC
Confidence 444334444456788999999864 4776533 22 1 156899999987764 23445677778899999
Q ss_pred EEEEe
Q 032390 80 IAVYD 84 (142)
Q Consensus 80 ~iv~d 84 (142)
.|++-
T Consensus 131 ~i~~~ 135 (375)
T 4dcm_A 131 RIIAG 135 (375)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 98764
No 480
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=67.14 E-value=3.4 Score=31.45 Aligned_cols=34 Identities=3% Similarity=0.129 Sum_probs=28.9
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHH
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV 38 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~ 38 (142)
+|+++|+|+..+...++.+ . .++++++++|+.++
T Consensus 84 ~vvavE~D~~l~~~L~~~~-~---~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 84 QYSLLEKRSSLYKFLNAKF-E---GSPLQILKRDPYDW 117 (353)
T ss_dssp EEEEECCCHHHHHHHHHHT-T---TSSCEEECSCTTCH
T ss_pred EEEEEecCHHHHHHHHHhc-c---CCCEEEEECCccch
Confidence 4899999999999988876 2 35899999999876
No 481
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=65.80 E-value=3.7 Score=30.32 Aligned_cols=36 Identities=11% Similarity=-0.070 Sum_probs=26.3
Q ss_pred CCceeEEEEcCCCc-C------c--HHHHHHHHhcccCC--eEEEEe
Q 032390 49 EGSFDYAFVDADKD-N------Y--CNYHERLMKLLKVG--GIAVYD 84 (142)
Q Consensus 49 ~~~fD~IfiD~~~~-~------~--~~~~~~~~~~L~~g--G~iv~d 84 (142)
.+++|+|++|.... . + ..+++.+.+.|+|| |.+|+.
T Consensus 154 ~~~~DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~K 200 (282)
T 3gcz_A 154 VIPGDTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIK 200 (282)
T ss_dssp CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred CCCcCEEEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEE
Confidence 57899999997532 1 1 13466677899999 999885
No 482
>3sy8_A ROCR; TIM barrel phosphodiesterase-A, transcription regulator; HET: EPE; 2.50A {Pseudomonas aeruginosa}
Probab=65.40 E-value=31 Score=25.96 Aligned_cols=76 Identities=11% Similarity=0.041 Sum_probs=48.9
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCc--HHHHHHHHhcccCC
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNY--CNYHERLMKLLKVG 78 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~--~~~~~~~~~~L~~g 78 (142)
+|..||=++......+..++..+.. .+. ...++.+.+..+.. ...+|+|++|...+.. .++++.+... .+.
T Consensus 5 ~ILivDD~~~~~~~l~~~L~~~~~~-~v~-~a~~g~eal~~l~~----~~~~DlvllDi~mP~~dG~ell~~l~~~-~~~ 77 (400)
T 3sy8_A 5 NVLVLEDEPFQRLVAVTALKKVVPG-SIL-EAADGKEAVAILES----CGHVDIAICDLQMSGMDGLAFLRHASLS-GKV 77 (400)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHCSE-EEE-EESSHHHHHHHHHH----HSCEEEEEECSSCSSSCHHHHHHHHHHH-TCE
T ss_pred eEEEEcCCHHHHHHHHHHHHhcCCc-EEE-EecCHHHHHHHHhh----CCCCCEEEEeCCCCCCCHHHHHHHHHhc-CCC
Confidence 3678899999999999999875321 233 56677777766631 1479999999865432 3445554432 344
Q ss_pred eEEEE
Q 032390 79 GIAVY 83 (142)
Q Consensus 79 G~iv~ 83 (142)
..+++
T Consensus 78 ~~ii~ 82 (400)
T 3sy8_A 78 HSVIL 82 (400)
T ss_dssp EEEEE
T ss_pred ceEEE
Confidence 45554
No 483
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=64.53 E-value=4.6 Score=30.16 Aligned_cols=70 Identities=21% Similarity=0.143 Sum_probs=42.0
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHH-HHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCe
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEAL-SVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGG 79 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~-~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG 79 (142)
+|++++.+++..+.+++ +|.. .++...-. ++...+ .+.+|+||--.... ....++.+.+.|+++|
T Consensus 205 ~Vi~~~~~~~~~~~~~~----lGa~---~v~~~~~~~~~~~~~------~~~~D~vid~~g~~-~~~~~~~~~~~l~~~G 270 (360)
T 1piw_A 205 ETYVISRSSRKREDAMK----MGAD---HYIATLEEGDWGEKY------FDTFDLIVVCASSL-TDIDFNIMPKAMKVGG 270 (360)
T ss_dssp EEEEEESSSTTHHHHHH----HTCS---EEEEGGGTSCHHHHS------CSCEEEEEECCSCS-TTCCTTTGGGGEEEEE
T ss_pred EEEEEcCCHHHHHHHHH----cCCC---EEEcCcCchHHHHHh------hcCCCEEEECCCCC-cHHHHHHHHHHhcCCC
Confidence 37889999998888775 4543 22222112 333333 24799998433320 0123566788999999
Q ss_pred EEEEe
Q 032390 80 IAVYD 84 (142)
Q Consensus 80 ~iv~d 84 (142)
.++.-
T Consensus 271 ~iv~~ 275 (360)
T 1piw_A 271 RIVSI 275 (360)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 98863
No 484
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=63.60 E-value=6.3 Score=29.47 Aligned_cols=68 Identities=13% Similarity=0.051 Sum_probs=41.0
Q ss_pred CEEEEeCCh---hHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHH-HHHHhccc
Q 032390 1 MITAIDVNR---ETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYH-ERLMKLLK 76 (142)
Q Consensus 1 ~v~~ve~~~---~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~-~~~~~~L~ 76 (142)
+|++++.++ +..+.+++ +|.. .++ ..+..+.+... .+.+|+||--... ...+ +.+.+.|+
T Consensus 206 ~Vi~~~~~~~~~~~~~~~~~----~ga~-~v~--~~~~~~~~~~~------~~~~d~vid~~g~---~~~~~~~~~~~l~ 269 (366)
T 2cdc_A 206 EVWMANRREPTEVEQTVIEE----TKTN-YYN--SSNGYDKLKDS------VGKFDVIIDATGA---DVNILGNVIPLLG 269 (366)
T ss_dssp EEEEEESSCCCHHHHHHHHH----HTCE-EEE--CTTCSHHHHHH------HCCEEEEEECCCC---CTHHHHHHGGGEE
T ss_pred EEEEEeCCccchHHHHHHHH----hCCc-eec--hHHHHHHHHHh------CCCCCEEEECCCC---hHHHHHHHHHHHh
Confidence 378888888 77766654 4542 232 11222222221 2579999854432 2245 78889999
Q ss_pred CCeEEEEe
Q 032390 77 VGGIAVYD 84 (142)
Q Consensus 77 ~gG~iv~d 84 (142)
++|.++.-
T Consensus 270 ~~G~iv~~ 277 (366)
T 2cdc_A 270 RNGVLGLF 277 (366)
T ss_dssp EEEEEEEC
T ss_pred cCCEEEEE
Confidence 99998763
No 485
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=63.41 E-value=5.9 Score=25.99 Aligned_cols=69 Identities=12% Similarity=0.017 Sum_probs=44.2
Q ss_pred ChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhc--ccCCCceeEEEEcC--C---CcCcHHHHHHHHhcccCCeE
Q 032390 8 NRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKY--SENEGSFDYAFVDA--D---KDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 8 ~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~--~~~~~~fD~IfiD~--~---~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|+.++.++....+.+- ..++.+ .+.++..+ ..+...||.|++=. + ..-....+..+.+.|+|||.
T Consensus 21 ~pe~le~~k~~~~~~~~-~~~d~q------mlDRLa~G~VsLp~stYD~V~~lt~~~~~~~~l~r~li~~l~~aLkpgG~ 93 (136)
T 2km1_A 21 TPELVENTKAQAASKKV-KFVDQF------LINKLNDGSITLENAKYETVHYLTPEAQTDIKFPKKLISVLADSLKPNGS 93 (136)
T ss_dssp SHHHHHHHHHHHHHTTE-EEEEEE------EHHHHHHTCCCCCSSSCCSEEEECCCSSCSCCCCHHHHHHHHTTCCTTCC
T ss_pred CHHHHHHHHHhhhcccc-chhhHH------HHHHHhcCcccCCcccccEEEEecCCccchhhcCHHHHHHHHHHhCCCCE
Confidence 57888888887776411 223333 23344332 13467899998632 2 12237789999999999999
Q ss_pred EEE
Q 032390 81 AVY 83 (142)
Q Consensus 81 iv~ 83 (142)
+..
T Consensus 94 L~g 96 (136)
T 2km1_A 94 LIG 96 (136)
T ss_dssp EEC
T ss_pred EEe
Confidence 875
No 486
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=62.86 E-value=22 Score=22.05 Aligned_cols=45 Identities=9% Similarity=0.066 Sum_probs=30.3
Q ss_pred HHHHHHHHHHcCCCC---cEEEEEccHHHHHHHHhhcccCCCceeEEEEcCC
Q 032390 12 YEIGLPIIKKAGVDH---KINFIESEALSVLDQLLKYSENEGSFDYAFVDAD 60 (142)
Q Consensus 12 ~~~a~~~~~~~~~~~---~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~ 60 (142)
++.+++.++..|+.- ...+..|+..+.+-.... ...+|+|++...
T Consensus 72 l~~~~~~~~~~g~~~~~~~~~~~~g~~~~~I~~~a~----~~~~dliV~G~~ 119 (147)
T 3hgm_A 72 AVQAKTRATELGVPADKVRAFVKGGRPSRTIVRFAR----KRECDLVVIGAQ 119 (147)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEEEESCHHHHHHHHHH----HTTCSEEEECSS
T ss_pred HHHHHHHHHhcCCCccceEEEEecCCHHHHHHHHHH----HhCCCEEEEeCC
Confidence 344455556667765 577888888776655542 457999999754
No 487
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=62.79 E-value=11 Score=27.86 Aligned_cols=63 Identities=16% Similarity=0.207 Sum_probs=40.6
Q ss_pred CEEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 1 MITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
+|++++.+++..+.+++ +|.. .+ + .+.. .+ .+.+|+||--.... ..++.+.+.|+++|.
T Consensus 202 ~Vi~~~~~~~~~~~~~~----lGa~-~v--~-~~~~----~~------~~~~D~vid~~g~~---~~~~~~~~~l~~~G~ 260 (348)
T 3two_A 202 EVSVFARNEHKKQDALS----MGVK-HF--Y-TDPK----QC------KEELDFIISTIPTH---YDLKDYLKLLTYNGD 260 (348)
T ss_dssp EEEEECSSSTTHHHHHH----TTCS-EE--E-SSGG----GC------CSCEEEEEECCCSC---CCHHHHHTTEEEEEE
T ss_pred eEEEEeCCHHHHHHHHh----cCCC-ee--c-CCHH----HH------hcCCCEEEECCCcH---HHHHHHHHHHhcCCE
Confidence 37888989988887764 5643 22 2 3322 11 23799998433322 246778899999999
Q ss_pred EEEe
Q 032390 81 AVYD 84 (142)
Q Consensus 81 iv~d 84 (142)
++.-
T Consensus 261 iv~~ 264 (348)
T 3two_A 261 LALV 264 (348)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 9874
No 488
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=62.19 E-value=54 Score=25.53 Aligned_cols=74 Identities=9% Similarity=0.116 Sum_probs=42.2
Q ss_pred CEEEEeCChhHHHHHHHHH------------HHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc------
Q 032390 1 MITAIDVNRETYEIGLPII------------KKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD------ 62 (142)
Q Consensus 1 ~v~~ve~~~~~~~~a~~~~------------~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~------ 62 (142)
+|+++|++++.++..++.. ++.-...++++. .|..+.+ ...|+||+--+.+
T Consensus 33 ~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~t-td~~ea~----------~~aDvvii~Vptp~~~~~~ 101 (446)
T 4a7p_A 33 EVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFT-TDLAEGV----------KDADAVFIAVGTPSRRGDG 101 (446)
T ss_dssp EEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEE-SCHHHHH----------TTCSEEEECCCCCBCTTTC
T ss_pred EEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEE-CCHHHHH----------hcCCEEEEEcCCCCccccC
Confidence 3789999999888766521 000001234432 3433322 3579999863322
Q ss_pred -----CcHHHHHHHHhcccCCeEEEEec
Q 032390 63 -----NYCNYHERLMKLLKVGGIAVYDN 85 (142)
Q Consensus 63 -----~~~~~~~~~~~~L~~gG~iv~dn 85 (142)
......+.+.+.|++|.++|...
T Consensus 102 ~~Dl~~v~~v~~~i~~~l~~g~iVV~~S 129 (446)
T 4a7p_A 102 HADLSYVFAAAREIAENLTKPSVIVTKS 129 (446)
T ss_dssp CBCTHHHHHHHHHHHHSCCSCCEEEECS
T ss_pred CccHHHHHHHHHHHHHhcCCCCEEEEeC
Confidence 13455666778898888877643
No 489
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=61.41 E-value=14 Score=27.06 Aligned_cols=73 Identities=8% Similarity=0.089 Sum_probs=43.9
Q ss_pred EEEEeCChhHHHHHHHHHHH----cCCCC--cEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcc
Q 032390 2 ITAIDVNRETYEIGLPIIKK----AGVDH--KINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLL 75 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~----~~~~~--~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L 75 (142)
|+.++.+++.++..++.... .+... ++.....+..+. + ..+|+|++-.+.....+.++.+.+.+
T Consensus 30 V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-------~~~D~vi~~v~~~~~~~~~~~l~~~l 99 (359)
T 1bg6_A 30 VLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLA---V-------KDADVILIVVPAIHHASIAANIASYI 99 (359)
T ss_dssp EEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHH---H-------TTCSEEEECSCGGGHHHHHHHHGGGC
T ss_pred EEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHH---H-------hcCCEEEEeCCchHHHHHHHHHHHhC
Confidence 67889988877766553200 00100 010122333332 1 36999999877666677888888889
Q ss_pred cCCeEEEEe
Q 032390 76 KVGGIAVYD 84 (142)
Q Consensus 76 ~~gG~iv~d 84 (142)
++|.+++..
T Consensus 100 ~~~~~vv~~ 108 (359)
T 1bg6_A 100 SEGQLIILN 108 (359)
T ss_dssp CTTCEEEES
T ss_pred CCCCEEEEc
Confidence 998877654
No 490
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=61.25 E-value=16 Score=26.72 Aligned_cols=71 Identities=11% Similarity=0.093 Sum_probs=47.2
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcC-----------------c
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN-----------------Y 64 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~-----------------~ 64 (142)
|.++|+++.+++.-+.|+ . -+++.+|..++-..- -...|+++.-+++.. +
T Consensus 25 v~a~e~d~~a~~ty~~N~-----~--~~~~~~DI~~i~~~~------~~~~D~l~ggpPCQ~fS~ag~~~g~~d~R~~L~ 91 (331)
T 3ubt_Y 25 ICANEYDKSIWKTYESNH-----S--AKLIKGDISKISSDE------FPKCDGIIGGPPSQSWSEGGSLRGIDDPRGKLF 91 (331)
T ss_dssp EEEEECCTTTHHHHHHHC-----C--SEEEESCGGGCCGGG------SCCCSEEECCCCGGGTEETTEECCTTCGGGHHH
T ss_pred EEEEeCCHHHHHHHHHHC-----C--CCcccCChhhCCHhh------CCcccEEEecCCCCCcCCCCCccCCCCchhHHH
Confidence 568999999999988875 2 267889987753221 246899987654311 2
Q ss_pred HHHHHHHHhcccCCeEEEEeccc
Q 032390 65 CNYHERLMKLLKVGGIAVYDNTL 87 (142)
Q Consensus 65 ~~~~~~~~~~L~~gG~iv~dn~~ 87 (142)
.++++ +.+.++|. +++++|+-
T Consensus 92 ~~~~r-~i~~~~Pk-~~~~ENV~ 112 (331)
T 3ubt_Y 92 YEYIR-ILKQKKPI-FFLAENVK 112 (331)
T ss_dssp HHHHH-HHHHHCCS-EEEEEECC
T ss_pred HHHHH-HHhccCCe-EEEeeeec
Confidence 33333 33557887 77888884
No 491
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=61.15 E-value=18 Score=25.67 Aligned_cols=64 Identities=17% Similarity=0.257 Sum_probs=38.3
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCC-ceeEEEEcCCCcCcHHHHHHHHhcccCCeE
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG-SFDYAFVDADKDNYCNYHERLMKLLKVGGI 80 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~-~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~ 80 (142)
|+.+|.+++..+.++ ..|... . ...+..+. -. ..|+|++-.+.....+.++.+.+.++++.+
T Consensus 29 V~~~d~~~~~~~~~~----~~g~~~--~-~~~~~~~~----------~~~~aDvVilavp~~~~~~v~~~l~~~l~~~~i 91 (281)
T 2g5c_A 29 IYGYDINPESISKAV----DLGIID--E-GTTSIAKV----------EDFSPDFVMLSSPVRTFREIAKKLSYILSEDAT 91 (281)
T ss_dssp EEEECSCHHHHHHHH----HTTSCS--E-EESCGGGG----------GGTCCSEEEECSCHHHHHHHHHHHHHHSCTTCE
T ss_pred EEEEeCCHHHHHHHH----HCCCcc--c-ccCCHHHH----------hcCCCCEEEEcCCHHHHHHHHHHHHhhCCCCcE
Confidence 677888887776554 334321 1 11232221 13 689999877655556667777777888876
Q ss_pred EE
Q 032390 81 AV 82 (142)
Q Consensus 81 iv 82 (142)
|+
T Consensus 92 v~ 93 (281)
T 2g5c_A 92 VT 93 (281)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 492
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=60.76 E-value=37 Score=23.26 Aligned_cols=69 Identities=10% Similarity=0.046 Sum_probs=41.8
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHH--HHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCe
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGG 79 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~--~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG 79 (142)
|+.+|.+++.++.++ . .+.++.||+.+ .+... .-...|.|++-.+........-...+.+.|+.
T Consensus 34 v~vid~~~~~~~~~~-----~----~~~~i~gd~~~~~~l~~a-----~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~~~ 99 (234)
T 2aef_A 34 FVLAEDENVRKKVLR-----S----GANFVHGDPTRVSDLEKA-----NVRGARAVIVDLESDSETIHCILGIRKIDESV 99 (234)
T ss_dssp EEEESCGGGHHHHHH-----T----TCEEEESCTTCHHHHHHT-----TCTTCSEEEECCSCHHHHHHHHHHHHHHCSSS
T ss_pred EEEEECCHHHHHHHh-----c----CCeEEEcCCCCHHHHHhc-----CcchhcEEEEcCCCcHHHHHHHHHHHHHCCCC
Confidence 678899988776543 1 37889999863 34332 13578999986554322222333345567776
Q ss_pred EEEEe
Q 032390 80 IAVYD 84 (142)
Q Consensus 80 ~iv~d 84 (142)
.+++.
T Consensus 100 ~iia~ 104 (234)
T 2aef_A 100 RIIAE 104 (234)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 66653
No 493
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=59.32 E-value=26 Score=26.35 Aligned_cols=66 Identities=11% Similarity=0.023 Sum_probs=39.5
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCeEE
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIA 81 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG~i 81 (142)
|+.+|.+++.++.+.+ .|. . ...+..+.+.. -...|+||+-.+.......++.+.+.|++|.+|
T Consensus 48 V~v~dr~~~~~~~l~~----~g~----~-~~~s~~e~~~~-------a~~~DvVi~~vp~~~v~~vl~~l~~~l~~g~ii 111 (358)
T 4e21_A 48 CVVYDLNVNAVQALER----EGI----A-GARSIEEFCAK-------LVKPRVVWLMVPAAVVDSMLQRMTPLLAANDIV 111 (358)
T ss_dssp EEEECSCHHHHHHHHT----TTC----B-CCSSHHHHHHH-------SCSSCEEEECSCGGGHHHHHHHHGGGCCTTCEE
T ss_pred EEEEeCCHHHHHHHHH----CCC----E-EeCCHHHHHhc-------CCCCCEEEEeCCHHHHHHHHHHHHhhCCCCCEE
Confidence 6777888877665543 222 1 12344444432 234699988665545566677777888887766
Q ss_pred EE
Q 032390 82 VY 83 (142)
Q Consensus 82 v~ 83 (142)
+-
T Consensus 112 Id 113 (358)
T 4e21_A 112 ID 113 (358)
T ss_dssp EE
T ss_pred Ee
Confidence 53
No 494
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=59.22 E-value=11 Score=28.23 Aligned_cols=50 Identities=16% Similarity=0.074 Sum_probs=33.9
Q ss_pred EEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHH-HHhhcccCCCceeEEEEcCCCcCc
Q 032390 3 TAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLD-QLLKYSENEGSFDYAFVDADKDNY 64 (142)
Q Consensus 3 ~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~-~~~~~~~~~~~fD~IfiD~~~~~~ 64 (142)
.++|+|+.+++.-+.|+... ++.+|..++.. .+. ...+|+++..+++..+
T Consensus 39 ~a~e~d~~a~~ty~~N~~~~-------~~~~DI~~~~~~~i~-----~~~~Dil~ggpPCQ~f 89 (327)
T 3qv2_A 39 IPFDINEIANKIYSKNFKEE-------VQVKNLDSISIKQIE-----SLNCNTWFMSPPCQPY 89 (327)
T ss_dssp EEECCCHHHHHHHHHHHCCC-------CBCCCTTTCCHHHHH-----HTCCCEEEECCCCTTC
T ss_pred EEEECCHHHHHHHHHHCCCC-------cccCChhhcCHHHhc-----cCCCCEEEecCCccCc
Confidence 59999999999999988332 45667655422 221 2369999988764433
No 495
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes}
Probab=59.01 E-value=28 Score=21.32 Aligned_cols=42 Identities=7% Similarity=0.186 Sum_probs=28.0
Q ss_pred HHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCC
Q 032390 13 EIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDAD 60 (142)
Q Consensus 13 ~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~ 60 (142)
+.+.+.+...|..-...+..|+..+.+.... . .+|+|++...
T Consensus 69 ~~~~~~~~~~g~~~~~~v~~g~~~~~I~~~a-----~-~~dliV~G~~ 110 (138)
T 3idf_A 69 QKFSTFFTEKGINPFVVIKEGEPVEMVLEEA-----K-DYNLLIIGSS 110 (138)
T ss_dssp HHHHHHHHTTTCCCEEEEEESCHHHHHHHHH-----T-TCSEEEEECC
T ss_pred HHHHHHHHHCCCCeEEEEecCChHHHHHHHH-----h-cCCEEEEeCC
Confidence 3344445555666567778888877666653 4 8999998764
No 496
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=58.84 E-value=50 Score=24.10 Aligned_cols=68 Identities=12% Similarity=0.044 Sum_probs=42.3
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHH--HHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhcccCCe
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGG 79 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~--~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~L~~gG 79 (142)
|+.+|.|++.++ +++ ..+.++.||+.+ .+.+. .-+..|.+++-.+.+...-..-...+.+.|..
T Consensus 140 v~vid~~~~~~~-~~~--------~~~~~i~gd~~~~~~L~~a-----~i~~a~~vi~~~~~d~~n~~~~~~ar~~~~~~ 205 (336)
T 1lnq_A 140 FVLAEDENVRKK-VLR--------SGANFVHGDPTRVSDLEKA-----NVRGARAVIVDLESDSETIHCILGIRKIDESV 205 (336)
T ss_dssp EEEESCGGGHHH-HHH--------TTCEEEESCTTSHHHHHHT-----CSTTEEEEEECCSSHHHHHHHHHHHHTTCTTS
T ss_pred EEEEeCChhhhh-HHh--------CCcEEEEeCCCCHHHHHhc-----ChhhccEEEEcCCccHHHHHHHHHHHHHCCCC
Confidence 678999999887 553 257899999864 34332 13579999986553321112223335667776
Q ss_pred EEEE
Q 032390 80 IAVY 83 (142)
Q Consensus 80 ~iv~ 83 (142)
.+++
T Consensus 206 ~iia 209 (336)
T 1lnq_A 206 RIIA 209 (336)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 6665
No 497
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=58.35 E-value=28 Score=21.58 Aligned_cols=42 Identities=7% Similarity=0.090 Sum_probs=27.3
Q ss_pred HHHHHHHcCC-CCcEEEEEccHHHHHHH-HhhcccCCCceeEEEEcCC
Q 032390 15 GLPIIKKAGV-DHKINFIESEALSVLDQ-LLKYSENEGSFDYAFVDAD 60 (142)
Q Consensus 15 a~~~~~~~~~-~~~v~~~~~da~~~l~~-~~~~~~~~~~fD~IfiD~~ 60 (142)
+.+.+...|+ .-...+..|+..+.+-. ..+ ...+|+|++...
T Consensus 74 ~~~~~~~~g~~~~~~~~~~g~~~~~I~~~~a~----~~~~dliV~G~~ 117 (146)
T 3s3t_A 74 RQQFVATTSAPNLKTEISYGIPKHTIEDYAKQ----HPEIDLIVLGAT 117 (146)
T ss_dssp HHHHHTTSSCCCCEEEEEEECHHHHHHHHHHH----STTCCEEEEESC
T ss_pred HHHHHHhcCCcceEEEEecCChHHHHHHHHHh----hcCCCEEEECCC
Confidence 3334444566 55567788888776655 542 468999999754
No 498
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=57.74 E-value=29 Score=24.94 Aligned_cols=64 Identities=8% Similarity=0.022 Sum_probs=40.5
Q ss_pred EEEEeCChhHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCcCcHHHHHHHHhc-ccCCeE
Q 032390 2 ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKL-LKVGGI 80 (142)
Q Consensus 2 v~~ve~~~~~~~~a~~~~~~~~~~~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~~~~~~~~~~~~~-L~~gG~ 80 (142)
|+.+|.+++..+.+++. .| +++ ..+..+.+ ...|+||+-.+.....+.++.+.+. ++++.+
T Consensus 32 V~v~dr~~~~~~~l~~~---~g----i~~-~~~~~~~~----------~~aDvVilav~p~~~~~vl~~l~~~~l~~~~i 93 (280)
T 3tri_A 32 ICVTNRSLDKLDFFKEK---CG----VHT-TQDNRQGA----------LNADVVVLAVKPHQIKMVCEELKDILSETKIL 93 (280)
T ss_dssp EEEECSSSHHHHHHHHT---TC----CEE-ESCHHHHH----------SSCSEEEECSCGGGHHHHHHHHHHHHHTTTCE
T ss_pred EEEEeCCHHHHHHHHHH---cC----CEE-eCChHHHH----------hcCCeEEEEeCHHHHHHHHHHHHhhccCCCeE
Confidence 67788888876665542 23 232 23333322 3579999877655567788888887 877766
Q ss_pred EEE
Q 032390 81 AVY 83 (142)
Q Consensus 81 iv~ 83 (142)
|+.
T Consensus 94 iiS 96 (280)
T 3tri_A 94 VIS 96 (280)
T ss_dssp EEE
T ss_pred EEE
Confidence 664
No 499
>1yf3_A DNA adenine methylase; T4DAM, methyltransferase, transferase-DNA complex; HET: DNA SAH; 2.29A {Enterobacteria phage T4} SCOP: c.66.1.28 PDB: 1yfj_A* 1yfl_A* 1q0s_A* 1q0t_A*
Probab=56.77 E-value=27 Score=24.99 Aligned_cols=52 Identities=23% Similarity=0.141 Sum_probs=33.1
Q ss_pred CcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCCc----Cc---------HHHHHHHHhcccCCeEEEEecc
Q 032390 26 HKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD----NY---------CNYHERLMKLLKVGGIAVYDNT 86 (142)
Q Consensus 26 ~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~~----~~---------~~~~~~~~~~L~~gG~iv~dn~ 86 (142)
.++++.++|+.+.+ . .+=|+|++|||.. .| .++.+.+.++-..|+.++..+.
T Consensus 148 ~~v~i~~~Df~~~i--~-------~~~~fvY~DPPY~~~~~~Y~~~f~~~d~~~L~~~l~~l~~~g~~~~lS~~ 212 (259)
T 1yf3_A 148 DKIIFSSLHFKDVK--I-------LDGDFVYVDPPYLITVADYNKFWSEDEEKDLLNLLDSLNDRGIKFGLSNV 212 (259)
T ss_dssp GGEEEECCCGGGCC--C-------CTTEEEEECCCCTTSCCGGGGGCCHHHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred cCCEEEcCCHHHHh--C-------CCCeEEEECCCCCCccchhccCCCHHHHHHHHHHHHHHhhCCCEEEEEee
Confidence 47999999999876 2 2348999999732 12 3334444343345677776554
No 500
>2g1p_A DNA adenine methylase; DAM methylation, GATC recognition, base flipping, bacterial factor, transferase-DNA complex; HET: DNA SAH; 1.89A {Escherichia coli} PDB: 2ore_D*
Probab=56.52 E-value=7.3 Score=28.40 Aligned_cols=29 Identities=7% Similarity=0.093 Sum_probs=23.5
Q ss_pred CcEEEEEccHHHHHHHHhhcccCCCceeEEEEcCCC
Q 032390 26 HKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK 61 (142)
Q Consensus 26 ~~v~~~~~da~~~l~~~~~~~~~~~~fD~IfiD~~~ 61 (142)
.++++.++|+.+.+... + +=|+|++|||.
T Consensus 156 ~~v~i~~~Df~~~i~~~------~-~~~fvY~DPPY 184 (278)
T 2g1p_A 156 QNAFFYCESYADSMARA------D-DSSVVYCDPPY 184 (278)
T ss_dssp GGEEEEECCHHHHHTTC------C-TTEEEEECCSC
T ss_pred CCcEEEeCCHHHHHHhc------C-CCCEEEeCCcc
Confidence 47999999999988653 2 45899999974
Done!