Query 032392
Match_columns 142
No_of_seqs 127 out of 1123
Neff 7.6
Searched_HMMs 13730
Date Mon Mar 25 22:08:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032392.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/032392hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ct5a_ c.1.6.2 (A:) "Hypothet 100.0 1.1E-29 7.7E-34 194.1 14.3 129 1-132 108-244 (244)
2 d1vfsa2 c.1.6.1 (A:13-249) Ala 99.9 3.2E-25 2.3E-29 168.1 15.3 130 1-137 88-224 (237)
3 d1bd0a2 c.1.6.1 (A:12-244) Ala 99.9 6.1E-22 4.4E-26 149.7 11.8 125 2-137 91-220 (233)
4 d1rcqa2 c.1.6.1 (A:8-233) Alan 99.9 4.2E-22 3.1E-26 150.0 10.6 121 2-137 89-213 (226)
5 d1hkva2 c.1.6.1 (A:46-310) Dia 98.8 1.5E-08 1.1E-12 76.1 10.2 103 3-109 89-212 (265)
6 d1twia2 c.1.6.1 (A:50-313) Dia 98.7 5.8E-08 4.2E-12 72.7 11.2 103 3-110 96-215 (264)
7 d1f3ta2 c.1.6.1 (A:44-283) Euk 98.6 1.5E-07 1.1E-11 69.6 10.5 98 2-109 87-193 (240)
8 d7odca2 c.1.6.1 (A:44-283) Euk 98.5 5.8E-07 4.2E-11 66.1 10.7 98 2-109 87-193 (240)
9 d1knwa2 c.1.6.1 (A:32-278) Dia 98.5 1.3E-06 9.6E-11 64.5 12.4 97 3-110 88-196 (247)
10 d1ps9a1 c.1.4.1 (A:1-330) 2,4- 79.6 2.9 0.00021 30.7 7.1 116 12-137 196-320 (330)
11 d2nlya1 c.6.2.7 (A:31-254) Hyp 74.6 11 0.00079 26.1 9.4 113 10-130 38-158 (224)
12 d1rpxa_ c.1.2.2 (A:) D-ribulos 73.6 5.7 0.00041 27.8 6.9 73 61-136 140-216 (230)
13 d1tqja_ c.1.2.2 (A:) D-ribulos 69.5 4 0.00029 28.3 5.3 55 79-136 152-208 (221)
14 d2flia1 c.1.2.2 (A:3-219) D-ri 67.2 8 0.00058 26.5 6.5 72 62-136 130-205 (217)
15 d1o98a1 c.105.1.1 (A:77-310) 2 58.8 25 0.0018 24.4 8.9 78 7-94 49-131 (234)
16 d2aeba1 c.42.1.1 (A:5-313) Arg 58.1 27 0.002 24.6 8.3 37 34-72 240-276 (309)
17 d1xfka_ c.42.1.1 (A:) Formimid 56.8 30 0.0022 24.7 9.8 39 34-73 257-295 (324)
18 d1zj8a1 d.58.36.1 (A:327-406) 55.8 5.1 0.00037 23.0 3.1 46 7-56 28-73 (80)
19 d1aopa1 d.58.36.1 (A:81-145) S 53.9 6 0.00043 21.9 3.1 48 6-56 11-58 (65)
20 d1x7fa2 c.1.8.12 (A:1-244) Out 52.0 8 0.00058 27.4 4.2 39 9-51 50-88 (244)
21 d2a0ma1 c.42.1.1 (A:13-310) Ar 51.3 29 0.0021 24.4 7.4 35 38-73 239-273 (298)
22 d1pq3a_ c.42.1.1 (A:) Arginase 49.4 38 0.0028 23.7 10.1 38 34-73 240-277 (306)
23 d1tv5a1 c.1.4.1 (A:158-566) Di 46.8 50 0.0037 24.3 11.0 96 25-132 266-376 (409)
24 d2ceva_ c.42.1.1 (A:) Arginase 45.2 28 0.0021 24.3 6.5 27 38-67 240-266 (298)
25 d1ub3a_ c.1.10.1 (A:) Deoxyrib 44.5 31 0.0023 23.4 6.3 44 7-56 130-173 (211)
26 d1f76a_ c.1.4.1 (A:) Dihydroor 44.1 49 0.0036 23.4 12.1 95 24-131 210-322 (336)
27 d1u1ia1 c.2.1.3 (A:1-227,A:333 36.9 11 0.0008 27.2 2.9 32 61-92 247-286 (287)
28 d1h2vz_ d.58.7.1 (Z:) CBP20, 2 35.2 16 0.0012 21.0 3.0 53 12-66 22-76 (93)
29 d1ykga1 c.23.5.2 (A:63-208) Su 35.2 40 0.0029 21.1 5.4 62 7-73 12-90 (146)
30 d2cqca1 d.58.7.1 (A:109-191) A 34.1 13 0.00093 20.8 2.4 29 13-42 25-54 (83)
31 d1zj8a2 d.58.36.1 (A:10-161) S 32.7 32 0.0023 22.1 4.5 47 6-56 96-142 (152)
32 d1whwa_ d.58.7.1 (A:) Probable 32.3 11 0.00079 22.0 1.9 53 13-67 24-78 (99)
33 d1rvka1 c.1.11.2 (A:127-381) H 31.7 67 0.0049 21.4 6.8 47 6-56 22-68 (255)
34 d1x5ua1 d.58.7.1 (A:7-99) Spli 31.3 12 0.00087 21.6 2.0 52 13-66 25-78 (93)
35 d1z41a1 c.1.4.1 (A:2-338) NADP 30.6 85 0.0062 22.2 8.4 102 26-137 209-316 (337)
36 d2v4jb2 d.58.36.2 (B:2-135) Di 30.4 26 0.0019 22.3 3.6 10 85-94 110-119 (134)
37 d1mzha_ c.1.10.1 (A:) Deoxyrib 29.6 75 0.0055 21.6 6.4 43 8-56 131-173 (225)
38 d2hqsc1 d.79.7.1 (C:68-173) Pe 29.5 29 0.0021 20.3 3.6 51 46-100 19-73 (106)
39 d1h1ya_ c.1.2.2 (A:) D-ribulos 29.1 76 0.0055 21.2 10.7 75 54-136 127-205 (220)
40 d1izca_ c.1.12.5 (A:) Macropho 28.9 72 0.0052 22.6 6.4 47 79-129 229-275 (299)
41 d1x7fa2 c.1.8.12 (A:1-244) Out 28.7 29 0.0021 24.2 4.0 86 38-128 2-100 (244)
42 d2cqba1 d.58.7.1 (A:1-89) Pept 27.3 16 0.0011 20.8 2.0 53 13-67 21-75 (89)
43 d1fxla1 d.58.7.1 (A:37-118) Hu 26.7 21 0.0015 19.6 2.4 50 12-66 17-71 (82)
44 d1cvja1 d.58.7.1 (A:11-90) Pol 26.6 28 0.002 19.1 3.0 52 13-66 16-69 (80)
45 d1u6fa1 d.58.7.1 (A:1-139) RNA 25.9 21 0.0015 21.9 2.6 51 14-66 59-111 (139)
46 d3bypa1 d.52.9.1 (A:6-87) Puta 25.8 13 0.00098 21.1 1.4 21 42-63 1-21 (82)
47 d1xrsb1 c.23.6.1 (B:102-261) D 25.7 77 0.0056 20.2 6.6 69 49-124 69-137 (160)
48 d2cpza1 d.58.7.1 (A:383-484) C 25.6 24 0.0018 20.5 2.7 50 13-67 34-88 (102)
49 d1gq6a_ c.42.1.1 (A:) Proclava 25.5 79 0.0058 21.9 6.1 29 34-67 239-267 (301)
50 d1kkoa1 c.1.11.2 (A:161-411) b 25.2 98 0.0071 21.2 10.0 98 27-130 72-174 (251)
51 d1p1ta_ d.58.7.1 (A:) Cleavage 25.0 25 0.0019 20.3 2.7 52 13-66 24-77 (104)
52 d1rk8a_ d.58.7.1 (A:) RNA-bind 24.6 22 0.0016 20.1 2.3 50 12-66 22-76 (88)
53 d1fxla2 d.58.7.1 (A:119-203) H 24.3 17 0.0013 20.4 1.7 43 13-56 22-69 (85)
54 d1i60a_ c.1.15.4 (A:) Hypothet 24.3 93 0.0068 20.6 7.1 48 9-64 123-171 (278)
55 d2fiqa1 c.1.10.7 (A:1-420) Put 23.4 1.4E+02 0.01 22.3 7.8 101 2-110 16-130 (420)
56 d1woha_ c.42.1.1 (A:) Agmatina 23.1 1.1E+02 0.008 21.0 8.8 36 34-73 239-276 (303)
57 d1twda_ c.1.30.1 (A:) Copper h 22.9 1.1E+02 0.0081 21.0 6.3 28 43-71 66-94 (247)
58 d3bofa2 c.1.26.1 (A:1-300) Cob 22.9 1.1E+02 0.0079 20.9 6.7 63 2-70 145-208 (300)
59 d2akja2 d.58.36.1 (A:22-174) F 22.7 40 0.0029 21.6 3.6 47 7-56 97-143 (153)
60 d1q7sa_ c.131.1.1 (A:) Bit1 (C 22.4 80 0.0058 19.1 4.9 31 2-35 55-85 (117)
61 d1vkma_ c.138.1.1 (A:) Hypothe 21.4 51 0.0037 23.6 4.2 44 6-53 37-80 (292)
62 d2u2fa_ d.58.7.1 (A:) Splicing 20.9 22 0.0016 19.9 1.8 52 13-66 17-70 (85)
63 d3erja1 c.131.1.1 (A:2-117) Hy 20.8 59 0.0043 19.8 3.9 31 2-35 51-81 (116)
64 d1o0ya_ c.1.10.1 (A:) Deoxyrib 20.6 1.3E+02 0.0091 20.7 6.5 41 10-56 166-206 (251)
65 d2masa_ c.70.1.1 (A:) Inosine- 20.3 80 0.0058 22.0 5.2 26 46-73 13-38 (313)
66 d1rlka_ c.131.1.1 (A:) Hypothe 20.2 77 0.0056 19.2 4.4 31 2-35 54-84 (116)
67 d1eepa_ c.1.5.1 (A:) Inosine m 20.2 78 0.0057 23.2 5.2 40 86-129 180-222 (388)
No 1
>d1ct5a_ c.1.6.2 (A:) "Hypothetical" protein ybl036c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.96 E-value=1.1e-29 Score=194.07 Aligned_cols=129 Identities=34% Similarity=0.580 Sum_probs=108.5
Q ss_pred CeEecCCHHHHHHHHHHHHhcC--CCCceEEEEEeCCCCCCccCCChh-hHHHHHHHHH-ccCCCeeEeeEeeecCCC--
Q 032392 1 MVEGVGNEKIANHLDKAVSNLG--RKPLKVLVQVNTSGEESKSGIDPS-SCLGIVEHVR-LRCPNLEFSGLMTIGMPD-- 74 (142)
Q Consensus 1 ~i~svds~~~~~~l~~~a~~~~--~~~~~v~I~v~tg~~~~R~G~~~~-~~~~l~~~i~-~~~~~l~l~Gl~th~~~~-- 74 (142)
|||||||++.+..|++.+.+.+ ..++.|+||||++.+.+|.|+.++ ++.++++.+. ..+++|++.||||+++..
T Consensus 108 ~I~svds~kla~~l~~~~~~~~~~~~~~~~~iQVNi~~e~~KsG~~~~~~l~~~~~~~~~~~~~~l~l~GLM~i~p~~~~ 187 (244)
T d1ct5a_ 108 SVETIDSLKKAKKLNESRAKFQPDCNPILCNVQINTSHEDQKSGLNNEAEIFEVIDFFLSEECKYIKLNGLMTIGSWNVS 187 (244)
T ss_dssp EEEEECSHHHHHHHHHHHHHHCTTSCCEEEEEEBCCSSSCCSSSBCCHHHHHHHHHHHHSTTCCSEEEEEEECCCCCC--
T ss_pred cccccccccchhHHHHHHhhhhcccCcceeEEeeecccccccCCCCcHHHHHHHHHHHHHHhcccchhccccccccCCCC
Confidence 5899999999999999887643 136889999999999999999875 6788888773 168999999999999862
Q ss_pred C--CCcHHHHHHHHHHHHHHHHHhCCCCCCCeEEecCchhHHHHHHcCCcEEecCccccC
Q 032392 75 Y--TSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFG 132 (142)
Q Consensus 75 ~--~~~~~~~~~~~~~~~~l~~~~g~~~~~~~lS~G~s~~~~~a~~~g~t~VR~G~~ifg 132 (142)
. ......|+.+..+++.+++.++. ...||||||+||++|+++|+|+||+|+.|||
T Consensus 188 ~~~~~~~~~F~~l~~l~~~l~~~~~~---~~~LSMGMS~Dye~AI~~GsT~VRIGs~iFG 244 (244)
T d1ct5a_ 188 HEDSKENRDFATLVEWKKKIDAKFGT---SLKLSMGMSADFREAIRQGTAEVRIGTDIFG 244 (244)
T ss_dssp -------HHHHHHHHHHHHHHHHHCC---CCEEECCCTTTHHHHHHTTCSEEEESHHHHC
T ss_pred chhhHHHHHHHHHHHHHHHHhccCCC---CCEEeChhhhhHHHHHHCCCCEEEcCchhcC
Confidence 2 22346899999999999988653 5689999999999999999999999999998
No 2
>d1vfsa2 c.1.6.1 (A:13-249) Alanine racemase {Streptomyces lavendulae [TaxId: 1914]}
Probab=99.93 E-value=3.2e-25 Score=168.09 Aligned_cols=130 Identities=14% Similarity=0.133 Sum_probs=112.7
Q ss_pred CeEecCCHHHHHHHHHHHHhcCCCCceEEEEEeCCCCCCccCCChhhHHHHHHH---HHccCCCeeEeeEeeecCC-CCC
Q 032392 1 MVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEH---VRLRCPNLEFSGLMTIGMP-DYT 76 (142)
Q Consensus 1 ~i~svds~~~~~~l~~~a~~~~~~~~~v~I~v~tg~~~~R~G~~~~~~~~l~~~---i~~~~~~l~l~Gl~th~~~-~~~ 76 (142)
++++|+|.+.++.+.+.+++.+ ++++|||+|||| |+|+|+.++++.++++. ++ ..++|++.|||||++. |..
T Consensus 88 i~~~i~s~~~l~~l~~~a~~~~-~~~~vhLkiDTG--M~RlG~~~~e~~~l~~~~~~~~-~~~~l~~~Gi~TH~a~ad~~ 163 (237)
T d1vfsa2 88 IDVSVSGMWALDEVRAAARAAG-RTARIQLKADTG--LGRNGCQPADWAELVGAAVAAQ-AEGTVQVTGVWSHFACADEP 163 (237)
T ss_dssp CEEEECSHHHHHHHHHHHHHHT-SCEEEEEEBCSS--CCSSSBCHHHHHHHHHHHHHHH-HTTSEEEEEEECCCSSTTST
T ss_pred ccceeccHHHHHHHHHHHHhcC-CCeeEEEEecCC--CCCCCCChhHHHHHHHHHHhhh-ccCceeeeeeecccccccch
Confidence 3678999999999999998887 899999999999 99999999888887764 56 7899999999999997 332
Q ss_pred C---cHHHHHHHHHHHHHHHHHhCCCCCCCeEEecCchhHHHHHHcCCcEEecCccccCCCccc
Q 032392 77 S---TPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 137 (142)
Q Consensus 77 ~---~~~~~~~~~~~~~~l~~~~g~~~~~~~lS~G~s~~~~~a~~~g~t~VR~G~~ifg~~~~~ 137 (142)
. ...|+++|.++.+.+++. |++ +..+|+++|+.....++...||||||+.|||..|..
T Consensus 164 ~~~~~~~Q~~~F~~~~~~l~~~-~~~--~~~~h~aNS~~~~~~~~~~~d~vR~Gi~lYG~~P~~ 224 (237)
T d1vfsa2 164 GHPSIRLQLDAFRDMLAYAEKE-GVD--PEVRHIANSPATLTLPETHFDLVRTGLAVYGVSPSP 224 (237)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHT-TCC--CSEEEEECHHHHHHCGGGCSSEEEECGGGGTCCSCG
T ss_pred hhhhHHHHHHHHHHHHHHHHHc-CCC--CCcEEeeCCHHHHcCCCcCCCEeCcChhhcCCCCCC
Confidence 2 247999999999999886 776 567899999998888888999999999999998754
No 3
>d1bd0a2 c.1.6.1 (A:12-244) Alanine racemase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=99.87 E-value=6.1e-22 Score=149.75 Aligned_cols=125 Identities=15% Similarity=0.129 Sum_probs=99.6
Q ss_pred eEecCCHHHHHHHHHHHHhcCCCCceEEEEEeCCCCCCccCCChhh-HHHHHHHHHccCCCeeEeeEeeecCC-CCCCc-
Q 032392 2 VEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSGEESKSGIDPSS-CLGIVEHVRLRCPNLEFSGLMTIGMP-DYTST- 78 (142)
Q Consensus 2 i~svds~~~~~~l~~~a~~~~~~~~~v~I~v~tg~~~~R~G~~~~~-~~~l~~~i~~~~~~l~l~Gl~th~~~-~~~~~- 78 (142)
+++|.|.+++..++..+ +.+ ++++|||+|||| |+|+|+.+++ ...+++.+. ..+++++.|+|||++. |+.+.
T Consensus 91 ~~~v~~~~~~~~~~~~~-~~~-~~~~vhLkvDTG--M~RlG~~~~e~~~~~~~~~~-~~~~l~i~Gi~THla~ad~~~~~ 165 (233)
T d1bd0a2 91 ALTVFRSDWLEEASALY-SGP-FPIHFHLKMDTG--MGRLGVKDEEETKRIVALIE-RHPHFVLEGLYTHFATADEVNTD 165 (233)
T ss_dssp EEEECCHHHHHHHHHHC-CCS-SCEEEEEEBCSS--SCSSSBCSHHHHHHHHHHHH-HSTTEEEEEEECCCSSTTSSCCH
T ss_pred cceeehHHHhhhhhhhh-ccC-cceEEEEEeccc--cccCCCChHHHHHHHHHHHh-cccccchhhhhhhhcCCCccchh
Confidence 57889999988887764 345 789999999999 9999997754 566677788 8999999999999998 43332
Q ss_pred --HHHHHHHHHHHHHHHHHhCCCCCCCeEEecCchhHHHHHHcCCcEEecCccccCCCccc
Q 032392 79 --PENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 137 (142)
Q Consensus 79 --~~~~~~~~~~~~~l~~~~g~~~~~~~lS~G~s~~~~~a~~~g~t~VR~G~~ifg~~~~~ 137 (142)
..|+++|.++.+.+ +.. ...+|+++|......++.+.||||||+.+||..|.+
T Consensus 166 ~~~~q~~~f~~~~~~l----~~~--~~~~h~anSaa~l~~~~~~~d~vR~Gi~lYG~~p~~ 220 (233)
T d1bd0a2 166 YFSYQYTRFLHMLEWL----PSR--PPLVHCANSAASLRFPDRTFNMVRFGIAMYGLAPSP 220 (233)
T ss_dssp HHHHHHHHHHHHHTTC----SSC--CSEEECCCHHHHHHCTTSCTTEEEECGGGGTCCSCG
T ss_pred HHHHHHHHHHHHHHhc----ccc--ccceeecccHHHhcCCcccCCEECcCceeECCCCCC
Confidence 36777777655432 333 467899999988888899999999999999998764
No 4
>d1rcqa2 c.1.6.1 (A:8-233) Alanine racemase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=99.86 E-value=4.2e-22 Score=149.96 Aligned_cols=121 Identities=19% Similarity=0.213 Sum_probs=100.3
Q ss_pred eEecCCHHHHHHHHHHHHhcCCCCceEEEEEeCCCCCCccCCChhhHHHHHHHHHccCCCeeEeeEeeecCC-CCCC---
Q 032392 2 VEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP-DYTS--- 77 (142)
Q Consensus 2 i~svds~~~~~~l~~~a~~~~~~~~~v~I~v~tg~~~~R~G~~~~~~~~l~~~i~~~~~~l~l~Gl~th~~~-~~~~--- 77 (142)
++++.|.+.++.++..+ .+ ++++|||+|||| |+|+|+.++++.++++.++ .++++++.|+|||++. |..+
T Consensus 89 ~~~i~~~~~~~~~~~~~--~~-~~~~vhlkiDTG--M~RlG~~~~e~~~~~~~~~-~~~~l~~~gi~tHfa~ad~~~~~~ 162 (226)
T d1rcqa2 89 WCVVHCAWQLEAIERAS--LA-RPLNVWLKMDSG--MHRVGFFPEDFRAAHERLR-ASGKVAKIVMMSHFSRADELDCPR 162 (226)
T ss_dssp EEEECSHHHHHHHHHCC--CS-SCEEEEEEBCSS--SCSSSBCHHHHHHHHHHHH-HTTCEEEEEEECCCSSTTCTTCTH
T ss_pred cceeccHHHHHHHHHHh--hc-cceeEEEEEecc--ccccccChHHHHHHHHHhh-ccccccceeccccccccccchhhH
Confidence 56788999988887653 24 689999999999 9999999999999999999 9999999999999987 3322
Q ss_pred cHHHHHHHHHHHHHHHHHhCCCCCCCeEEecCchhHHHHHHcCCcEEecCccccCCCccc
Q 032392 78 TPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYA 137 (142)
Q Consensus 78 ~~~~~~~~~~~~~~l~~~~g~~~~~~~lS~G~s~~~~~a~~~g~t~VR~G~~ifg~~~~~ 137 (142)
...|.++|.++.+ +++ ..+|+.+|+.....++.+.||||||+.+||..|..
T Consensus 163 ~~~Q~~~F~~~~~------~~~---~~~h~aNSaa~l~~~~~~~d~vR~Gi~lYG~~P~~ 213 (226)
T d1rcqa2 163 TEEQLAAFSAASQ------GLE---GEISLRNSPAVLGWPKVPSDWVRPGILLYGATPFE 213 (226)
T ss_dssp HHHHHHHHHHHHT------TCC---SCEECCCHHHHHHCTTSCCSEECCCGGGGTCCSSS
T ss_pred HHHHHHHHHHHHh------ccc---ccccccCCHHHHCCCCCCCCEEccCceeeCcCcCC
Confidence 2478888877543 332 45788899888888899999999999999998764
No 5
>d1hkva2 c.1.6.1 (A:46-310) Diaminopimelate decarboxylase LysA {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=98.81 E-value=1.5e-08 Score=76.10 Aligned_cols=103 Identities=19% Similarity=0.167 Sum_probs=75.8
Q ss_pred EecCCHHHHHHHHHHHHhcCCCCceEEEEEe------------CCCCCCccCCChhhHH--HHHHHHHccCCCeeEeeEe
Q 032392 3 EGVGNEKIANHLDKAVSNLGRKPLKVLVQVN------------TSGEESKSGIDPSSCL--GIVEHVRLRCPNLEFSGLM 68 (142)
Q Consensus 3 ~svds~~~~~~l~~~a~~~~~~~~~v~I~v~------------tg~~~~R~G~~~~~~~--~l~~~i~~~~~~l~l~Gl~ 68 (142)
.+|||+++++.+.+++.+.+ +.++|.+++| +|...+|||++++++. +.+..+. ..+++++.||+
T Consensus 89 i~vDs~~El~~i~~~~~~~~-~~~~v~lr~~p~~~~~~~~~~~~g~~~skFG~~~~~~~~~~~~~~~~-~~~~l~~~GlH 166 (265)
T d1hkva2 89 IVVDSMTEIERLDAIAGEAG-IVQDVLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVRRVF-ATDHLRLVGLH 166 (265)
T ss_dssp EEECSHHHHHHHHHHHHHHT-CCEEEEEEEECSEEEEETEEEECSSCCSSSSEESTTSHHHHHHHHHH-HCSSEEEEEEE
T ss_pred ccccchHHHHHHHHHhhhcc-ccccccccccceeccccccceeccccccccccchhhhHHHHHHHHHH-hhcCceeeeee
Confidence 58999999999999998887 8899999988 4566799999887643 4455666 78899999998
Q ss_pred eecCC---CCCCcHHHHHHHHHHHHHHH----HHhCCCCCCCeEEecC
Q 032392 69 TIGMP---DYTSTPENFRTLLNCRAEVC----KALGMAEDQCELSMGM 109 (142)
Q Consensus 69 th~~~---~~~~~~~~~~~~~~~~~~l~----~~~g~~~~~~~lS~G~ 109 (142)
.|.+. +.+...+..+++..++..+. ++.|.+ +..+.+|+
T Consensus 167 ~HvGSq~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~--l~~ldiGG 212 (265)
T d1hkva2 167 SHIGSQIFDVDGFELAAHRVIGLLRDVVGEFGPEKTAQ--IATVDLGG 212 (265)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHHHHHHHHHHHHHHSTT--CCEEECCC
T ss_pred eeecccccchHHHHHHHHHHHHHHHhHHHHHHHhcCCC--cceeeecC
Confidence 88764 33334455666665555443 234666 78888764
No 6
>d1twia2 c.1.6.1 (A:50-313) Diaminopimelate decarboxylase LysA {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=98.73 E-value=5.8e-08 Score=72.70 Aligned_cols=103 Identities=16% Similarity=0.213 Sum_probs=79.9
Q ss_pred EecCCHHHHHHHHHHHHhcCCCCceEEEEEeCCCC------------CCccCCChhhHHH--HHHHHHccCCCeeEeeEe
Q 032392 3 EGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSGE------------ESKSGIDPSSCLG--IVEHVRLRCPNLEFSGLM 68 (142)
Q Consensus 3 ~svds~~~~~~l~~~a~~~~~~~~~v~I~v~tg~~------------~~R~G~~~~~~~~--l~~~i~~~~~~l~l~Gl~ 68 (142)
.++||.+++..+.+.+.+.+ .+++|.+++|.+.. .+|||++.++... ...... ..++|++.|++
T Consensus 96 ~~~ds~~el~~i~~~a~~~~-~~~~v~~Ri~~~~~~~~~~~~~~~~~~skfG~~~~~~~~~~~~~~~~-~~~~l~~~GlH 173 (264)
T d1twia2 96 FNVDSISELILINETAKELG-ETANVAFRINPNVNPKTHPKISTGLKKNKFGLDVESGIAMKAIKMAL-EMEYVNVVGVH 173 (264)
T ss_dssp EEECSHHHHHHHHHHHHHHT-CCEEEEEEEECCCCTTTCHHHHHHHHHSSCSEESTTSHHHHHHHHHH-HCSSEEEEEEE
T ss_pred eeccchHHHHHHHHHHHHcC-CCcccccccccCCCcccccccccccccccccccHHHHHHHHHHHHHH-Hhcccccccce
Confidence 57999999999999999988 88999999986532 2699998766443 344456 78899999998
Q ss_pred eecCC---CCCCcHHHHHHHHHHHHHHHHHhCCCCCCCeEEecCc
Q 032392 69 TIGMP---DYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMS 110 (142)
Q Consensus 69 th~~~---~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~lS~G~s 110 (142)
.|.+. +.+...+..+.+.++++.+++. |++ +..|.+|+-
T Consensus 174 ~H~gS~~~~~~~~~~~~~~~~~~~~~l~~~-g~~--~~~ldiGGG 215 (264)
T d1twia2 174 CHIGSQLTDISPFIEETRKVMDFVVELKEE-GIE--IEDVNLGGG 215 (264)
T ss_dssp CCCCSSBCCSHHHHHHHHHHHHHHHHHHHT-TCC--CSEEECCCC
T ss_pred eeehhcccchhhHHHHHHHHHHHHHHHHHh-CCC--ccEEeecCC
Confidence 88865 3333457888888888888765 766 788877643
No 7
>d1f3ta2 c.1.6.1 (A:44-283) Eukaryotic ornithine decarboxylase {Trypanosoma brucei [TaxId: 5691]}
Probab=98.62 E-value=1.5e-07 Score=69.59 Aligned_cols=98 Identities=15% Similarity=0.151 Sum_probs=69.3
Q ss_pred eEecCCHHHHHHHHHHHHhcCCCCceEEEEEe------CCCCCCccCCChhhHHHHHHHHHccCCCeeEeeEeeecCC--
Q 032392 2 VEGVGNEKIANHLDKAVSNLGRKPLKVLVQVN------TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP-- 73 (142)
Q Consensus 2 i~svds~~~~~~l~~~a~~~~~~~~~v~I~v~------tg~~~~R~G~~~~~~~~l~~~i~~~~~~l~l~Gl~th~~~-- 73 (142)
+.++||+++++.+.+.+ ...++.++|+ ++...+|||++++++.++++.+. +. ++++.||+.|.+.
T Consensus 87 ~~~~ds~~el~~i~~~~-----~~~~~~~ri~~~~~~~~~~~~~kFGi~~~~~~~~~~~~~-~~-~~~l~GlH~H~GS~~ 159 (240)
T d1f3ta2 87 VMTFDCVDELEKVAKTH-----PKAKMVLRISTDDSLARCRLSVKFGAKVEDCRFILEQAK-KL-NIDVTGVSFHVGSGS 159 (240)
T ss_dssp EEEECSHHHHHHHHHHC-----TTCEEEEEBCC----------CCSCBCHHHHHHHHHHHH-HT-TCEEEEEECCCCSCC
T ss_pred ceeeeehhhhhhhhhhc-----cccccccccccccccccccccccchhhHHHHHHHHHHHh-cc-ccceeeeeeehhhcc
Confidence 46899999999998775 3456666766 45557899999999999999887 65 6999999988864
Q ss_pred -CCCCcHHHHHHHHHHHHHHHHHhCCCCCCCeEEecC
Q 032392 74 -DYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGM 109 (142)
Q Consensus 74 -~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~lS~G~ 109 (142)
+.+...+..+.+..+++.+++ .|.+ +..+.+|+
T Consensus 160 ~~~~~~~~~~~~~~~l~~~~~~-~g~~--~~~ldiGG 193 (240)
T d1f3ta2 160 TDASTFAQAISDSRFVFDMGTE-LGFN--MHILDIGG 193 (240)
T ss_dssp SCTHHHHHHHHHHHHHHHHHHH-TTCC--CCEEECCC
T ss_pred cCHHHHHHHHHHHHHHHHHHHH-cCCC--ceeeeccC
Confidence 222234556666777777665 4765 67787764
No 8
>d7odca2 c.1.6.1 (A:44-283) Eukaryotic ornithine decarboxylase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.49 E-value=5.8e-07 Score=66.10 Aligned_cols=98 Identities=13% Similarity=0.094 Sum_probs=70.0
Q ss_pred eEecCCHHHHHHHHHHHHhcCCCCceEEEEEeC------CCCCCccCCChhhHHHHHHHHHccCCCeeEeeEeeecCC--
Q 032392 2 VEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT------SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP-- 73 (142)
Q Consensus 2 i~svds~~~~~~l~~~a~~~~~~~~~v~I~v~t------g~~~~R~G~~~~~~~~l~~~i~~~~~~l~l~Gl~th~~~-- 73 (142)
+..+||.+.++.+.+.+ ...++.+++++ +...+|||++.+++.++++.+. .. ++++.||+.|.+.
T Consensus 87 ~~~~ds~~el~~i~~~~-----~~~~v~~ri~~~~~~~~~~~~~kfG~~~~~~~~~~~~~~-~~-~l~l~GlH~H~GSq~ 159 (240)
T d7odca2 87 MMTFDSEIELMKVARAH-----PKAKLVLRIATDDSKAVCRLSVKFGATLKTSRLLLERAK-EL-NIDVIGVSFHVGSGC 159 (240)
T ss_dssp EEEECSHHHHHHHHHHC-----TTCEEEEEBCC-----------CCCBCHHHHHHHHHHHH-HT-TCEEEEEECCCCSSC
T ss_pred cccchhHHHHHHHHHhc-----ccccccccccccccccccCcCccccccHHHHHHHHHHhh-hc-CceEEeecccccccc
Confidence 46899999988887764 45677788874 4456899999999988888775 44 7999999888864
Q ss_pred -CCCCcHHHHHHHHHHHHHHHHHhCCCCCCCeEEecC
Q 032392 74 -DYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGM 109 (142)
Q Consensus 74 -~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~lS~G~ 109 (142)
+.+...+..+.+..+++.+++. |++ +..+.+|+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~-g~~--~~~ldiGG 193 (240)
T d7odca2 160 TDPDTFVQAVSDARCVFDMATEV-GFS--MHLLDIGG 193 (240)
T ss_dssp CCTHHHHHHHHHHHHHHHHHHHH-TCC--CCEEECCC
T ss_pred ccHHHHHHHHHHHHHHHHHHHHh-CCC--eeEEEeCC
Confidence 3333456667777788777664 876 78887765
No 9
>d1knwa2 c.1.6.1 (A:32-278) Diaminopimelate decarboxylase LysA {Escherichia coli [TaxId: 562]}
Probab=98.48 E-value=1.3e-06 Score=64.50 Aligned_cols=97 Identities=19% Similarity=0.192 Sum_probs=70.1
Q ss_pred EecCCHHHHHHHHHHHHhcCCCCceEEEEEeC------------CCCCCccCCChhhHHHHHHHHHccCCCeeEeeEeee
Q 032392 3 EGVGNEKIANHLDKAVSNLGRKPLKVLVQVNT------------SGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI 70 (142)
Q Consensus 3 ~svds~~~~~~l~~~a~~~~~~~~~v~I~v~t------------g~~~~R~G~~~~~~~~l~~~i~~~~~~l~l~Gl~th 70 (142)
..+||+++++.|.+.+. ..+|.|+||. +...+|||++++++.++++.++ . .++++.||+.|
T Consensus 88 i~~ds~~el~~l~~~~~-----~~~i~lRinp~~~~~~~~~~~~~~~~sKFG~~~~~~~~~~~~~~-~-~~~~l~GlH~H 160 (247)
T d1knwa2 88 VNAGSVDMLDQLGQVSP-----GHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQ-R-HHLQLVGIHMH 160 (247)
T ss_dssp EEESSHHHHHHHHHHST-----TCEEEEEEECSCCSSCTTSCCSSSTTCCCSEEGGGHHHHHHHHH-H-TTCEEEEEECC
T ss_pred hchhhhHHHHHHHhhcc-----cchhheeeeccccccccccccccccccccccchhhhhhhhhhhh-h-cccceeeehhc
Confidence 36899999999988753 4567778884 3345899999999998888776 4 58999999988
Q ss_pred cCCCCCCcHHHHHHHHHHHHHHHHHhCCCCCCCeEEecCc
Q 032392 71 GMPDYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMS 110 (142)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~lS~G~s 110 (142)
-+..- .....++.+..+.+.+.+. |.+ +..|-+|+-
T Consensus 161 igSq~-~~~~~~~~~~~~~~~~~~~-g~~--~~~ldiGGG 196 (247)
T d1knwa2 161 IGSGV-DYAHLEQVCGAMVRQVIEF-GQD--LQAISAGGG 196 (247)
T ss_dssp CCCTT-CHHHHHHHHHHHHHHHHHH-TCC--CSEEECCCC
T ss_pred cCccc-hhhHHHHHHHHHHHHHhhc-cCC--ceEEEecCc
Confidence 65421 2234555566666777664 776 788877644
No 10
>d1ps9a1 c.1.4.1 (A:1-330) 2,4-dienoyl-CoA reductase, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=79.56 E-value=2.9 Score=30.72 Aligned_cols=116 Identities=7% Similarity=0.070 Sum_probs=64.4
Q ss_pred HHHHHHHHhcCCCCceEEEEEeCCCCCCccCCChhhHHHHHHHHHccC--CCeeEeeEeeecCC---CCCCcHHHHHHHH
Q 032392 12 NHLDKAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRC--PNLEFSGLMTIGMP---DYTSTPENFRTLL 86 (142)
Q Consensus 12 ~~l~~~a~~~~~~~~~v~I~v~tg~~~~R~G~~~~~~~~l~~~i~~~~--~~l~l~Gl~th~~~---~~~~~~~~~~~~~ 86 (142)
+.+..+.+..+ ....|.++++... ..+-|.++++..++++.+. +. ..+.+. ...+.+. ...+... ..+.
T Consensus 196 Eii~air~~vg-~d~~v~~R~s~~d-~~~~g~~~~~~~~~~~~l~-~~g~d~~~~~-~g~~~~~~~~~~~~~~~--~~~~ 269 (330)
T d1ps9a1 196 EVVRAVRERVG-NDFIIIYRLSMLD-LVEDGGTFAETVELAQAIE-AAGATIINTG-IGWHEARIPTIATPVPR--GAFS 269 (330)
T ss_dssp HHHHHHHHHHC-SSSEEEEEEEEEC-CSTTCCCHHHHHHHHHHHH-HHTCSEEEEE-ECBTTCSSCSSSTTSCT--TTTH
T ss_pred HHHHHHHHHcC-CCceeEecccccc-cccCCCCHHHHHHHHHHHH-Hhhhhhhhcc-cccccccccccCCCCcc--hhHH
Confidence 34445555556 6788888998764 3456788899999999886 43 222221 1112111 1111111 1123
Q ss_pred HHHHHHHHHhCCCCCCCeEEecCchhHH---HHHHcC-CcEEecCccccCCCccc
Q 032392 87 NCRAEVCKALGMAEDQCELSMGMSGDFE---QAIEMG-STSVRIGSTIFGPREYA 137 (142)
Q Consensus 87 ~~~~~l~~~~g~~~~~~~lS~G~s~~~~---~a~~~g-~t~VR~G~~ifg~~~~~ 137 (142)
.+.+.+++. .+ .+.+..|.-.+.. .+++.| .|+|-.|..+.-+-...
T Consensus 270 ~~~~~ik~~--~~--~pvi~~G~i~~~~~ae~~l~~g~~D~V~~gR~~iadP~~~ 320 (330)
T d1ps9a1 270 WVTRKLKGH--VS--LPLVTTNRINDPQVADDILSRGDADMVSMARPFLADAELL 320 (330)
T ss_dssp HHHHHHTTS--CS--SCEEECSSCCSHHHHHHHHHTTSCSEEEESTHHHHCTTHH
T ss_pred HHHHHHHhh--CC--ceEEEeCCCCCHHHHHHHHHCCCcchhHhhHHHHhChhHH
Confidence 344455543 23 5667777533333 246777 69999999887665444
No 11
>d2nlya1 c.6.2.7 (A:31-254) Hypothetical protein BH1492 {Bacillus halodurans [TaxId: 86665]}
Probab=74.62 E-value=11 Score=26.08 Aligned_cols=113 Identities=12% Similarity=-0.067 Sum_probs=66.8
Q ss_pred HHHHHHHHHHhcCCCCceEEEEEe--------CCCCCCccCCChhhHHHHHHHHHccCCCeeEeeEeeecCCCCCCcHHH
Q 032392 10 IANHLDKAVSNLGRKPLKVLVQVN--------TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN 81 (142)
Q Consensus 10 ~~~~l~~~a~~~~~~~~~v~I~v~--------tg~~~~R~G~~~~~~~~l~~~i~~~~~~l~l~Gl~th~~~~~~~~~~~ 81 (142)
.+..+.+.|.+.| ..+-+|+-.. .|.+.=..|.+.+++...++......|+. .|+.-|.+.-.. +.
T Consensus 38 ~~~~~a~~A~~~g-~EvllhlPMep~~~~~~~~gp~~L~~~~~~~ei~~~l~~~l~~vP~a--vGvnNhmGS~~T---~~ 111 (224)
T d2nlya1 38 HSTKQAEIAQAAG-LEVIVHMPLEPKKGKISWLGPSGITSNLSVGEVKSRVRKAFDDIPYA--VGLNNHMGSKIV---EN 111 (224)
T ss_dssp THHHHHHHHHHTT-CEEEEEEEECCC--------CCCBCTTCCHHHHHHHHHHHHHHSTTC--CEEEEEECTTGG---GC
T ss_pred chHHHHHHHHHCC-CeEEEEcccCcccCCcCCCCCCcCCCCCCHHHHHHHHHHHHHhCccc--EEEecCcccchh---CC
Confidence 4566777777777 5555544332 33323355677878776666543288865 499887764222 22
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCeEEecCchhHHHHHHcCCcEEecCccc
Q 032392 82 FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTI 130 (142)
Q Consensus 82 ~~~~~~~~~~l~~~~g~~~~~~~lS~G~s~~~~~a~~~g~t~VR~G~~i 130 (142)
-+.+..+.+.|++. |+-+ ++-.+.+.|-....|.+.|.-..+.-.+|
T Consensus 112 ~~~m~~v~~~l~~~-gl~f-vDS~T~~~sva~~~A~~~gvp~~~rdvfL 158 (224)
T d2nlya1 112 EKIMRAILEVVKEK-NAFI-IDSGTSPHSLIPQLAEELEVPYATRSIFL 158 (224)
T ss_dssp HHHHHHHHHHHHHT-TCEE-EECCCCSSCSHHHHHHHTTCCEEECCEES
T ss_pred HHHHHHHHHHHHHc-CCEE-EecCCCcccHHHHHHHHcCCCeEEEEEec
Confidence 34456666777776 6421 11224466666778888888777665544
No 12
>d1rpxa_ c.1.2.2 (A:) D-ribulose-5-phosphate 3-epimerase {Potato (Solanum tuberosum) [TaxId: 4113]}
Probab=73.59 E-value=5.7 Score=27.75 Aligned_cols=73 Identities=18% Similarity=0.336 Sum_probs=47.0
Q ss_pred CeeEeeEeeecC-CCCCC-cHHHHHHHHHHHHHHHHHhCCCCCCCe-EEecCc-hhHHHHHHcCCcEEecCccccCCCcc
Q 032392 61 NLEFSGLMTIGM-PDYTS-TPENFRTLLNCRAEVCKALGMAEDQCE-LSMGMS-GDFEQAIEMGSTSVRIGSTIFGPREY 136 (142)
Q Consensus 61 ~l~l~Gl~th~~-~~~~~-~~~~~~~~~~~~~~l~~~~g~~~~~~~-lS~G~s-~~~~~a~~~g~t~VR~G~~ifg~~~~ 136 (142)
.+...=|||..+ ..-+. ....++++.++.+.+.+. +.+ +.. +=.|.+ .+.....+.|.+.+=.|++||+...+
T Consensus 140 ~vD~VllM~V~PGf~GQ~f~~~~~~kI~~~~~~~~~~-~~~--~~I~vDGGIn~~~i~~l~~~Gad~~V~GS~if~~~d~ 216 (230)
T d1rpxa_ 140 AVDLVLIMSVNPGFGGQSFIESQVKKISDLRKICAER-GLN--PWIEVDGGVGPKNAYKVIEAGANALVAGSAVFGAPDY 216 (230)
T ss_dssp TCSEEEEESSCTTCSSCCCCTTHHHHHHHHHHHHHHH-TCC--CEEEEESSCCTTTHHHHHHHTCCEEEESHHHHTSSCH
T ss_pred hCCEEEEEEecCCcccchhhhhhHHHHHHHHHHHHhc-CCc--eEEEEECCcCHHHHHHHHHcCCCEEEEChHHHCCCCH
Confidence 355555677443 22222 347888888888887776 654 332 233544 33445678899999999999987554
No 13
>d1tqja_ c.1.2.2 (A:) D-ribulose-5-phosphate 3-epimerase {Synechocystis sp. PCC 6803 [TaxId: 1148]}
Probab=69.53 E-value=4 Score=28.30 Aligned_cols=55 Identities=22% Similarity=0.381 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCe-EEecCch-hHHHHHHcCCcEEecCccccCCCcc
Q 032392 79 PENFRTLLNCRAEVCKALGMAEDQCE-LSMGMSG-DFEQAIEMGSTSVRIGSTIFGPREY 136 (142)
Q Consensus 79 ~~~~~~~~~~~~~l~~~~g~~~~~~~-lS~G~s~-~~~~a~~~g~t~VR~G~~ifg~~~~ 136 (142)
...++++.++.+.+++. +.+ +.. +=.|.+. +.....+.|.+.+=.|++||+...+
T Consensus 152 ~~~~~ki~~l~~~~~~~-~~~--~~I~VDGGIn~~~i~~l~~~Gad~~V~GS~if~~~d~ 208 (221)
T d1tqja_ 152 PEVLPKIRALRQMCDER-GLD--PWIEVDGGLKPNNTWQVLEAGANAIVAGSAVFNAPNY 208 (221)
T ss_dssp GGGHHHHHHHHHHHHHH-TCC--CEEEEESSCCTTTTHHHHHHTCCEEEESHHHHTSSCH
T ss_pred hhhHHHHHHHHhhhhcc-ccc--eEEEEECCcCHHHHHHHHHcCCCEEEEChHHhCCCCH
Confidence 47788899888888776 654 332 2334442 4555678899999999999986554
No 14
>d2flia1 c.1.2.2 (A:3-219) D-ribulose-5-phosphate 3-epimerase {Streptococcus pyogenes [TaxId: 1314]}
Probab=67.18 E-value=8 Score=26.55 Aligned_cols=72 Identities=15% Similarity=0.197 Sum_probs=44.6
Q ss_pred eeEeeEeeecCC-CCCC-cHHHHHHHHHHHHHHHHHhCCCCCCCe-EEecCch-hHHHHHHcCCcEEecCccccCCCcc
Q 032392 62 LEFSGLMTIGMP-DYTS-TPENFRTLLNCRAEVCKALGMAEDQCE-LSMGMSG-DFEQAIEMGSTSVRIGSTIFGPREY 136 (142)
Q Consensus 62 l~l~Gl~th~~~-~~~~-~~~~~~~~~~~~~~l~~~~g~~~~~~~-lS~G~s~-~~~~a~~~g~t~VR~G~~ifg~~~~ 136 (142)
+...=+||..+- .-+. ....++++.++.+.+.+. +.+ +.. +-.|.+. +.....+.|.+.+=.|++||+...+
T Consensus 130 id~vliM~V~pG~~Gq~f~~~~~~ki~~l~~~~~~~-~~~--~~I~vDGGIn~~~i~~l~~aGad~~V~Gsaif~~~d~ 205 (217)
T d2flia1 130 VDQVLIMTVNPGFGGQAFIPECLEKVATVAKWRDEK-GLS--FDIEVDGGVDNKTIRACYEAGANVFVAGSYLFKASDL 205 (217)
T ss_dssp CSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHHHHT-TCC--CEEEEESSCCTTTHHHHHHHTCCEEEESHHHHTSSCH
T ss_pred cCEEEEEEEcCcccccccchhhHHHHHHHHHHHHhc-CCC--eEEEEeCCCCHHHHHHHHHCCCCEEEEchHHhCCCCH
Confidence 344445664432 2222 347788888888887775 654 333 3445443 3444568899999999999986543
No 15
>d1o98a1 c.105.1.1 (A:77-310) 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain {Bacillus stearothermophilus [TaxId: 1422]}
Probab=58.84 E-value=25 Score=24.44 Aligned_cols=78 Identities=12% Similarity=0.109 Sum_probs=46.4
Q ss_pred CHHHHHHHHHHHHhcCCCCceEEEEEeCCCCCCccCCChhhH----HHHHHHHHccCCCeeEeeEee-ecCCCCCCcHHH
Q 032392 7 NEKIANHLDKAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSC----LGIVEHVRLRCPNLEFSGLMT-IGMPDYTSTPEN 81 (142)
Q Consensus 7 s~~~~~~l~~~a~~~~~~~~~v~I~v~tg~~~~R~G~~~~~~----~~l~~~i~~~~~~l~l~Gl~t-h~~~~~~~~~~~ 81 (142)
+.+.+.+|-+.|.+.| .+ +|.|++=+++ | -.+|... .++-+.+. +....++.-|+. +.+.|.+..
T Consensus 49 h~~Hl~al~~~a~~~g-v~-~V~iH~~~DG---R-Dt~p~s~~~~l~~l~~~~~-~~~~~~IASv~GRyyaMDRD~r--- 118 (234)
T d1o98a1 49 HIHHLYALLRLAAKEG-VK-RVYIHGFLDG---R-DVGPQTAPQYIKELQEKIK-EYGVGEIATLSGRYYSMDRDKR--- 118 (234)
T ss_dssp CHHHHHHHHHHHHHTT-CC-CEEEEEEECS---S-SSCTTCHHHHHHHHHHHHH-HHTCCEEEEEEEHHHHTCCSCC---
T ss_pred chHHHHHHHHHHHHcC-CC-ceEEEEEecC---C-CCCchhHHHHHHHHHHHhh-hccceeEEEeeccceecccccc---
Confidence 5778888999998877 32 5666666652 2 1233333 33444444 555667777776 666666554
Q ss_pred HHHHHHHHHHHHH
Q 032392 82 FRTLLNCRAEVCK 94 (142)
Q Consensus 82 ~~~~~~~~~~l~~ 94 (142)
++|.+..++.|..
T Consensus 119 WeR~~~ay~~l~~ 131 (234)
T d1o98a1 119 WDRVEKAYRAMVY 131 (234)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhc
Confidence 4455556665553
No 16
>d2aeba1 c.42.1.1 (A:5-313) Arginase {Human (Homo sapiens) [TaxId: 9606]}
Probab=58.10 E-value=27 Score=24.60 Aligned_cols=37 Identities=19% Similarity=0.140 Sum_probs=25.1
Q ss_pred CCCCCCccCCChhhHHHHHHHHHccCCCeeEeeEeeecC
Q 032392 34 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGM 72 (142)
Q Consensus 34 tg~~~~R~G~~~~~~~~l~~~i~~~~~~l~l~Gl~th~~ 72 (142)
||+ +.-.|++++++.++++.+. ..+.+.-..|.-+-+
T Consensus 240 ~~~-p~pgGls~~e~~~~~~~l~-~~~~v~g~di~E~~P 276 (309)
T d2aeba1 240 TGT-PVVGGLTYREGLYITEEIY-KTGLLSGLDIMEVNP 276 (309)
T ss_dssp BSS-CCSSCBCHHHHHHHHHHHH-HHSCEEEEEEECBCG
T ss_pred CCC-CCCCCcCHHHHHHHHHHHh-ccCCEEEEEEEEECC
Confidence 344 4567999999999999997 665444334444444
No 17
>d1xfka_ c.42.1.1 (A:) Formimidoylglutamase HutG {Vibrio cholerae [TaxId: 666]}
Probab=56.76 E-value=30 Score=24.68 Aligned_cols=39 Identities=8% Similarity=0.075 Sum_probs=25.7
Q ss_pred CCCCCCccCCChhhHHHHHHHHHccCCCeeEeeEeeecCC
Q 032392 34 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP 73 (142)
Q Consensus 34 tg~~~~R~G~~~~~~~~l~~~i~~~~~~l~l~Gl~th~~~ 73 (142)
|++ +.-.|++++++.++++.+....+.|.-..|.-+.+.
T Consensus 257 v~~-P~pgGls~~el~~~l~~i~~~~~~l~g~divE~~P~ 295 (324)
T d1xfka_ 257 VSA-PAARGVSLEALAPYFDRILHYKNKLMIADIAEYNPS 295 (324)
T ss_dssp SSS-CBSSCCCHHHHHHHHHHHHHCTTTEEEEEEECCCGG
T ss_pred CCC-CCCCCCCHHHHHHHHHHHHccCCCEEEEEEEEECCC
Confidence 344 668899999999999876414554555455555554
No 18
>d1zj8a1 d.58.36.1 (A:327-406) Sulfite reductase NirA {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=55.84 E-value=5.1 Score=22.98 Aligned_cols=46 Identities=7% Similarity=0.062 Sum_probs=20.9
Q ss_pred CHHHHHHHHHHHHhcCCCCceEEEEEeCCCCCCccCCChhhHHHHHHHHH
Q 032392 7 NEKIANHLDKAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVR 56 (142)
Q Consensus 7 s~~~~~~l~~~a~~~~~~~~~v~I~v~tg~~~~R~G~~~~~~~~l~~~i~ 56 (142)
+.+++..|+++|++.|. -.+ ++.+....-=.|++.+++.++.+.+.
T Consensus 28 t~~ql~~la~ia~~yg~--g~i--~lTtrq~l~l~~i~~~~~~~v~~~L~ 73 (80)
T d1zj8a1 28 SGTILTAVADLMARAGS--DRI--RFTPYQKLVILDIPDALLDDLIAGLD 73 (80)
T ss_dssp EHHHHHHHHHHHHHHTC--CCE--EECTTSCEEEEEECHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCC--CeE--EECCCCcEEEcCCCHHHHHHHHHHHH
Confidence 34555555555555441 112 33333222223445555555555554
No 19
>d1aopa1 d.58.36.1 (A:81-145) Sulfite reductase, domains 1 and 3 {Escherichia coli [TaxId: 562]}
Probab=53.86 E-value=6 Score=21.91 Aligned_cols=48 Identities=10% Similarity=-0.027 Sum_probs=27.3
Q ss_pred CCHHHHHHHHHHHHhcCCCCceEEEEEeCCCCCCccCCChhhHHHHHHHHH
Q 032392 6 GNEKIANHLDKAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVR 56 (142)
Q Consensus 6 ds~~~~~~l~~~a~~~~~~~~~v~I~v~tg~~~~R~G~~~~~~~~l~~~i~ 56 (142)
-+.+++..|++.|.+.| ..-.+ ++-|-....=-|++.+++.++++.+.
T Consensus 11 it~~ql~~la~ia~kyg-~~g~i--~~TtRQ~iql~~v~~~~l~~v~~~L~ 58 (65)
T d1aopa1 11 ITTKQWQAIDKFAGENT-IYGSI--RLTNRQTFQFHGILKKNVKPVHQMLH 58 (65)
T ss_dssp EEHHHHHHHHHHHHHHB-SSCCE--EECTTSCEEECCBC-----CHHHHHH
T ss_pred cCHHHHHHHHHHHHHhc-CCCce--eecCcceEEeCCCCHHHHHHHHHHHH
Confidence 36778888888887765 22233 45454334445677788888888886
No 20
>d1x7fa2 c.1.8.12 (A:1-244) Outer surface protein, N-terminal domain {Bacillus cereus [TaxId: 1396]}
Probab=52.03 E-value=8 Score=27.37 Aligned_cols=39 Identities=13% Similarity=0.066 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEEeCCCCCCccCCChhhHHHH
Q 032392 9 KIANHLDKAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGI 51 (142)
Q Consensus 9 ~~~~~l~~~a~~~~~~~~~v~I~v~tg~~~~R~G~~~~~~~~l 51 (142)
+.++.|-+.|.+.| +.|.+.|+... ++++|++++++..+
T Consensus 50 ~~~~~l~~~a~~~g---~~vi~DIsp~~-l~~lg~s~~dl~~~ 88 (244)
T d1x7fa2 50 AEFKEIINHAKDNN---MEVILDVAPAV-FDQLGISYSDLSFF 88 (244)
T ss_dssp HHHHHHHHHHHHTT---CEEEEEECTTC-C------CCCTHHH
T ss_pred HHHHHHHHHHHHCC---CEEEEEcCHHH-HHHhCCCHHHHHHH
Confidence 34566777777766 88999999886 88999887665443
No 21
>d2a0ma1 c.42.1.1 (A:13-310) Arginase {Trypanosoma cruzi [TaxId: 5693]}
Probab=51.34 E-value=29 Score=24.43 Aligned_cols=35 Identities=6% Similarity=0.177 Sum_probs=23.9
Q ss_pred CCccCCChhhHHHHHHHHHccCCCeeEeeEeeecCC
Q 032392 38 ESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP 73 (142)
Q Consensus 38 ~~R~G~~~~~~~~l~~~i~~~~~~l~l~Gl~th~~~ 73 (142)
+.-.|++++++.++++.+. ..+++.-..|.-+.+.
T Consensus 239 P~pgGLs~~e~~~~l~~~~-~~~~v~g~divE~~P~ 273 (298)
T d2a0ma1 239 PAAVGLSAQEAFDMCFLAG-KTPTVMMMDMSELNPL 273 (298)
T ss_dssp CBSSCBCHHHHHHHHHHHH-HCTTEEEEEEECBCTT
T ss_pred CCCCCcCHHHHHHHHHHHh-CCCCEEEEEEEEECCC
Confidence 5567999999999999986 6655443334444443
No 22
>d1pq3a_ c.42.1.1 (A:) Arginase {Human (Homo sapiens), isoform II, mitochondrial [TaxId: 9606]}
Probab=49.43 E-value=38 Score=23.72 Aligned_cols=38 Identities=16% Similarity=0.137 Sum_probs=26.6
Q ss_pred CCCCCCccCCChhhHHHHHHHHHccCCCeeEeeEeeecCC
Q 032392 34 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP 73 (142)
Q Consensus 34 tg~~~~R~G~~~~~~~~l~~~i~~~~~~l~l~Gl~th~~~ 73 (142)
||+ ..-.|++++++.++++.+. ..+.+.--.|+-+-+.
T Consensus 240 t~~-p~pgGls~~e~~~~l~~l~-~~~~v~g~divE~~P~ 277 (306)
T d1pq3a_ 240 TGT-PVVGGLTYREGMYIAEEIH-NTGLLSALDLVEVNPQ 277 (306)
T ss_dssp BSS-CCSSCBCHHHHHHHHHHHH-TTTCEEEEEEECBCGG
T ss_pred CCC-CCCCCCCHHHHHHHHHHHh-ccCCEEEEEEEEECCC
Confidence 344 5667999999999999998 7765544444545443
No 23
>d1tv5a1 c.1.4.1 (A:158-566) Dihydroorotate dehydrogenase {Plasmodium falciparum [TaxId: 5833]}
Probab=46.81 E-value=50 Score=24.32 Aligned_cols=96 Identities=11% Similarity=0.000 Sum_probs=52.5
Q ss_pred CceEEEEEeCCCCCCccCCChhhHHHHHHHHHccC--CCeeEeeEeeecCCCCCC-----c-----HHHHHHHHHHHHHH
Q 032392 25 PLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRC--PNLEFSGLMTIGMPDYTS-----T-----PENFRTLLNCRAEV 92 (142)
Q Consensus 25 ~~~v~I~v~tg~~~~R~G~~~~~~~~l~~~i~~~~--~~l~l~Gl~th~~~~~~~-----~-----~~~~~~~~~~~~~l 92 (142)
+.+|+|++-.+ ++.+++.++++.+. +. .++.+.+ |..+..... . ..-+..-...+.++
T Consensus 266 ~ppi~vKlsPd-------~~~~~i~~i~~~~~-~~g~dgii~~N--t~~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~v 335 (409)
T d1tv5a1 266 KPLVFVKLAPD-------LNQEQKKEIADVLL-ETNIDGMIISN--TTTQINDIKSFENKKGGVSGAKLKDISTKFICEM 335 (409)
T ss_dssp CCEEEEEECSC-------CCHHHHHHHHHHHH-HTTCSEEEECC--CBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHH
T ss_pred CCceEEEeCCC-------CCchhhHHHHHHHH-hccccceeccc--ccccccccccccccCCcccchhHHHHHHHHHHHH
Confidence 45777777665 24456777887775 33 2333322 222211110 0 12333333444445
Q ss_pred HHHhCCCCCCCeEEecCchhHHH---HHHcCCcEEecCccccC
Q 032392 93 CKALGMAEDQCELSMGMSGDFEQ---AIEMGSTSVRIGSTIFG 132 (142)
Q Consensus 93 ~~~~g~~~~~~~lS~G~s~~~~~---a~~~g~t~VR~G~~ifg 132 (142)
.+..+.+ ++.+.+|+=-+..- .+.+|.+.|++||.++.
T Consensus 336 ~~~~~~~--ipIIGvGGI~s~~Da~e~i~AGAs~VQv~T~li~ 376 (409)
T d1tv5a1 336 YNYTNKQ--IPIIASGGIFSGLDALEKIEAGASVCQLYSCLVF 376 (409)
T ss_dssp HHHTTTC--SCEEEESSCCSHHHHHHHHHTTEEEEEESHHHHH
T ss_pred HHHcCCC--ceEEEECCCCCHHHHHHHHHcCCCHHhhhhHHHh
Confidence 5544433 67887775544443 46889999999998653
No 24
>d2ceva_ c.42.1.1 (A:) Arginase {Bacillus caldovelox [TaxId: 33931]}
Probab=45.16 E-value=28 Score=24.32 Aligned_cols=27 Identities=7% Similarity=0.012 Sum_probs=20.9
Q ss_pred CCccCCChhhHHHHHHHHHccCCCeeEeeE
Q 032392 38 ESKSGIDPSSCLGIVEHVRLRCPNLEFSGL 67 (142)
Q Consensus 38 ~~R~G~~~~~~~~l~~~i~~~~~~l~l~Gl 67 (142)
..-.|+++.++.++++.+. +.++ +.|+
T Consensus 240 p~pgGl~~~e~~~~l~~l~-~~~~--v~g~ 266 (298)
T d2ceva_ 240 PVIGGLTYRESHLAMEMLA-EAQI--ITSA 266 (298)
T ss_dssp CCSSCBCHHHHHHHHHHHH-HHTC--EEEE
T ss_pred CCCCCCCHHHHHHHHHHHh-ccCC--EEEE
Confidence 5667999999999999997 5554 4455
No 25
>d1ub3a_ c.1.10.1 (A:) Deoxyribose-phosphate aldolase DeoC {Thermus thermophilus [TaxId: 274]}
Probab=44.54 E-value=31 Score=23.43 Aligned_cols=44 Identities=16% Similarity=0.110 Sum_probs=27.0
Q ss_pred CHHHHHHHHHHHHhcCCCCceEEEEEeCCCCCCccCCChhhHHHHHHHHH
Q 032392 7 NEKIANHLDKAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVR 56 (142)
Q Consensus 7 s~~~~~~l~~~a~~~~~~~~~v~I~v~tg~~~~R~G~~~~~~~~l~~~i~ 56 (142)
+.+++.+..+++.+.| .. + |+|+++-+..|..++++.-+.+.+.
T Consensus 130 ~~~ei~~a~~~a~~aG---ad-f--iKTSTG~~~~gat~e~v~~m~~~~~ 173 (211)
T d1ub3a_ 130 SPEEIARLAEAAIRGG---AD-F--LKTSTGFGPRGASLEDVALLVRVAQ 173 (211)
T ss_dssp CHHHHHHHHHHHHHHT---CS-E--EECCCSSSSCCCCHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHhc---cc-e--EEecCCCCCCCCCHHHHHHHHHHhC
Confidence 3455666667776666 22 2 4455546667778877766666665
No 26
>d1f76a_ c.1.4.1 (A:) Dihydroorotate dehydrogenase {Escherichia coli [TaxId: 562]}
Probab=44.09 E-value=49 Score=23.42 Aligned_cols=95 Identities=13% Similarity=0.135 Sum_probs=51.7
Q ss_pred CCceEEEEEeCCCCCCccCCChhhHHHHHHHHHccCCCeeEeeEeeecCC---CCCC-------c-----HHHHHHHHHH
Q 032392 24 KPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP---DYTS-------T-----PENFRTLLNC 88 (142)
Q Consensus 24 ~~~~v~I~v~tg~~~~R~G~~~~~~~~l~~~i~~~~~~l~l~Gl~th~~~---~~~~-------~-----~~~~~~~~~~ 88 (142)
..++|++++... ++.+++.++++.+. ... +.|+.+.-.. +... . ......-...
T Consensus 210 ~~~Pv~vKlsp~-------~~~~~i~~~a~~~~-~~g---~~gv~~int~~~~~~~~~~~~~~~~GGlSG~~i~~~al~~ 278 (336)
T d1f76a_ 210 KYVPIAVKIAPD-------LSEEELIQVADSLV-RHN---IDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEI 278 (336)
T ss_dssp SCCCEEEECCSC-------CCHHHHHHHHHHHH-HTT---CSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHH
T ss_pred CcCCcccccchh-------hhhhhhhhhHHHHH-hcC---ccchhhhhhhhcccccccccccccccccccchhHHHHHHH
Confidence 568998887655 24456677777765 332 3344332221 1100 0 1111112222
Q ss_pred HHHHHHHhCCCCCCCeEEecCchhHHH---HHHcCCcEEecCcccc
Q 032392 89 RAEVCKALGMAEDQCELSMGMSGDFEQ---AIEMGSTSVRIGSTIF 131 (142)
Q Consensus 89 ~~~l~~~~g~~~~~~~lS~G~s~~~~~---a~~~g~t~VR~G~~if 131 (142)
+.++.+..+.+ ++.+.+|+=.+... .+..|.+.|++||+++
T Consensus 279 v~~v~~~~~~~--ipIIG~GGI~s~~Da~e~i~aGAsaVQv~Tal~ 322 (336)
T d1f76a_ 279 IRRLSLELNGR--LPIIGVGGIDSVIAAREKIAAGASLVQIYSGFI 322 (336)
T ss_dssp HHHHHHHHTTS--SCEEEESSCCSHHHHHHHHHHTCSEEEESHHHH
T ss_pred HHHHHHHcCCC--CeEEEECCCCCHHHHHHHHHcCCcHHHHHHHHH
Confidence 33344443444 67887776655554 4688999999999963
No 27
>d1u1ia1 c.2.1.3 (A:1-227,A:333-392) Myo-inositol 1-phosphate synthase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=36.95 E-value=11 Score=27.15 Aligned_cols=32 Identities=16% Similarity=0.142 Sum_probs=22.4
Q ss_pred CeeEeeEeeecCC--------CCCCcHHHHHHHHHHHHHH
Q 032392 61 NLEFSGLMTIGMP--------DYTSTPENFRTLLNCRAEV 92 (142)
Q Consensus 61 ~l~l~Gl~th~~~--------~~~~~~~~~~~~~~~~~~l 92 (142)
.+-+.|++.|.+. +.....+||+.+.++...|
T Consensus 247 ~~~~~g~~~~~~~~~k~~~~~~~~~~~~q~~~l~~~~~~~ 286 (287)
T d1u1ia1 247 KKGVKGVVKEMAFFFKSPMDTNVINTHEQFVVLKEWYSNL 286 (287)
T ss_dssp TTTCCEECTTCGGGBSSCTTCCCCCHHHHHHHHHHHHHHH
T ss_pred hcCCCccchhhhHHhcCcccCCcccHHHHHHHHHHHHHhc
Confidence 6778899997765 2222458888888877655
No 28
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.19 E-value=16 Score=21.02 Aligned_cols=53 Identities=9% Similarity=0.072 Sum_probs=27.6
Q ss_pred HHHHHHHHhcCCCCceEEEEEeCCCCCCc-cCC-ChhhHHHHHHHHHccCCCeeEee
Q 032392 12 NHLDKAVSNLGRKPLKVLVQVNTSGEESK-SGI-DPSSCLGIVEHVRLRCPNLEFSG 66 (142)
Q Consensus 12 ~~l~~~a~~~~~~~~~v~I~v~tg~~~~R-~G~-~~~~~~~l~~~i~~~~~~l~l~G 66 (142)
+.|.+...+.| ....|.|-.+-.++.+| +|+ ......+....+. .+.+..+.|
T Consensus 22 ~~l~~~F~~~G-~i~~v~i~~~~~~~~~kg~afV~f~~~~~A~~Ai~-~l~g~~~~g 76 (93)
T d1h2vz_ 22 EQIYELFSKSG-DIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMR-YINGTRLDD 76 (93)
T ss_dssp HHHHHHHGGGS-CEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-HTTTSEETT
T ss_pred HHHHHHHHHHC-CcceeccccccccccccceEEEEECCHHHHHHHHH-HhCCCEECC
Confidence 34566666667 56666665554443555 552 3333333444444 445555555
No 29
>d1ykga1 c.23.5.2 (A:63-208) Sulfite reductase alpha-component CysJ N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=35.16 E-value=40 Score=21.13 Aligned_cols=62 Identities=13% Similarity=0.152 Sum_probs=35.1
Q ss_pred CHHHHHHHHHHHHhcCCCCceEEEEEe----------------CCCCCCccCCChhhHHHHHHHHHccCCCeeEeeE-ee
Q 032392 7 NEKIANHLDKAVSNLGRKPLKVLVQVN----------------TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGL-MT 69 (142)
Q Consensus 7 s~~~~~~l~~~a~~~~~~~~~v~I~v~----------------tg~~~~R~G~~~~~~~~l~~~i~~~~~~l~l~Gl-~t 69 (142)
+.+.|+.|.+.+.+.| ..+.+ +.++ +.+ .=-|-.|+....+.+.+. ....-.+.|+ ++
T Consensus 12 ae~~A~~l~~~l~~~g-~~~~~-~~~~~~~~~~l~~~~~~i~~~sT--~g~G~~P~~~~~f~~~l~-~~~~~~l~~~~~a 86 (146)
T d1ykga1 12 ARRVAEALRDDLLAAK-LNVKL-VNAGDYKFKQIASEKLLIVVTST--QGEGEPPEEAVALHKFLF-SKKAPKLENTAFA 86 (146)
T ss_dssp HHHHHHHHHHHHHHHT-CCCEE-EEGGGCCGGGGGGCSEEEEEEEC--BGGGBCCGGGHHHHHHHT-STTCCCCTTCEEE
T ss_pred HHHHHHHHHHHHHHCC-CCceE-eeccccchhhcccccceEEEEee--cCCCcCchhHHHHHHHHH-cccccccCCCeEE
Confidence 3566777877776665 33332 1222 121 113667788888988886 5443445565 55
Q ss_pred ecCC
Q 032392 70 IGMP 73 (142)
Q Consensus 70 h~~~ 73 (142)
+++.
T Consensus 87 VfGl 90 (146)
T d1ykga1 87 VFSL 90 (146)
T ss_dssp EEEE
T ss_pred EEcC
Confidence 5553
No 30
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.10 E-value=13 Score=20.80 Aligned_cols=29 Identities=17% Similarity=0.222 Sum_probs=15.6
Q ss_pred HHHHHHHhcCCCCceEEEEEeCCCCCCc-cC
Q 032392 13 HLDKAVSNLGRKPLKVLVQVNTSGEESK-SG 42 (142)
Q Consensus 13 ~l~~~a~~~~~~~~~v~I~v~tg~~~~R-~G 42 (142)
.|.+..++.| ....|.|..|..++.+| +|
T Consensus 25 ~l~~~F~~~G-~i~~v~i~~~~~~~~~~g~a 54 (83)
T d2cqca1 25 DLREVFSKYG-PIADVSIVYDQQSRRSRGFA 54 (83)
T ss_dssp HHHHHHHTTS-CEEEEEEEECSSSSSEEEEE
T ss_pred HHHHHHHHhC-CCccccccccccccccccce
Confidence 4555666666 55566555554332444 45
No 31
>d1zj8a2 d.58.36.1 (A:10-161) Sulfite reductase NirA {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=32.66 E-value=32 Score=22.10 Aligned_cols=47 Identities=6% Similarity=0.052 Sum_probs=29.0
Q ss_pred CCHHHHHHHHHHHHhcCCCCceEEEEEeCCCCCCccCCChhhHHHHHHHHH
Q 032392 6 GNEKIANHLDKAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVR 56 (142)
Q Consensus 6 ds~~~~~~l~~~a~~~~~~~~~v~I~v~tg~~~~R~G~~~~~~~~l~~~i~ 56 (142)
-+.+++..|+++|.+.+ .. .|++-|.....=.||..+++.++++.+.
T Consensus 96 lt~~Ql~~la~ia~~yg-~g---~i~iTtRQ~iql~gI~~~~l~~i~~~L~ 142 (152)
T d1zj8a2 96 LSAAALRTLGQISTEFA-RD---TADISDRQNVQYHWIEVENVPEIWRRLD 142 (152)
T ss_dssp ECHHHHHHHHHHHHHHS-TT---EEEECTTSCEEEEEECGGGHHHHHHHHH
T ss_pred ecHHHHHHHHHHHHHhC-CC---CccccCCceEEecCCCHHHHHHHHHHHH
Confidence 35677777777777765 21 2355554334444567777777777776
No 32
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=32.25 E-value=11 Score=21.99 Aligned_cols=53 Identities=15% Similarity=0.110 Sum_probs=24.5
Q ss_pred HHHHHHHhcCCCCceEEEEEeCCCCCCc-cC-CChhhHHHHHHHHHccCCCeeEeeE
Q 032392 13 HLDKAVSNLGRKPLKVLVQVNTSGEESK-SG-IDPSSCLGIVEHVRLRCPNLEFSGL 67 (142)
Q Consensus 13 ~l~~~a~~~~~~~~~v~I~v~tg~~~~R-~G-~~~~~~~~l~~~i~~~~~~l~l~Gl 67 (142)
.|.+...+.| ....|.|-.|..++.+| +| |..++..+.-+.+. .+.+..+.|=
T Consensus 24 ~l~~~F~~~g-~v~~v~i~~d~~tg~~~g~afV~f~~~~~a~~A~~-~l~g~~~~gr 78 (99)
T d1whwa_ 24 DLEKLFSAYG-PLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYA-EVDGQVFQGR 78 (99)
T ss_dssp HHHHHHHTTS-CEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHH-HTTTEESSSC
T ss_pred HHHHHHHhcC-CceeeeecccccccccCcceEEEECCHHHHHHHHH-HcCCCEECCE
Confidence 4455555556 44455444443332343 44 23334344444444 4555555553
No 33
>d1rvka1 c.1.11.2 (A:127-381) Hypothetical protein Atu3453 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=31.73 E-value=67 Score=21.41 Aligned_cols=47 Identities=15% Similarity=0.072 Sum_probs=22.7
Q ss_pred CCHHHHHHHHHHHHhcCCCCceEEEEEeCCCCCCccCCChhhHHHHHHHHH
Q 032392 6 GNEKIANHLDKAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVR 56 (142)
Q Consensus 6 ds~~~~~~l~~~a~~~~~~~~~v~I~v~tg~~~~R~G~~~~~~~~l~~~i~ 56 (142)
++++.+.+..+.+.+.|-+. +++++|....+.+-++++-.+.++.++
T Consensus 22 ~tpe~~~~~a~~~~~~Gf~~----~Kik~g~~~~~~~~~~~~d~~~v~avR 68 (255)
T d1rvka1 22 ATPEDYGRFAETLVKRGYKG----IKLHTWMPPVSWAPDVKMDLKACAAVR 68 (255)
T ss_dssp SSHHHHHHHHHHHHHHTCSE----EEEECCCTTSTTCCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCE----EEEcCCCCccccccCHHHHHHHHHHHH
Confidence 45555555555554445222 245555434444545544445555554
No 34
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.33 E-value=12 Score=21.61 Aligned_cols=52 Identities=10% Similarity=0.023 Sum_probs=24.6
Q ss_pred HHHHHHHhcCCCCceEEEEEeCCCCCCc-cCC-ChhhHHHHHHHHHccCCCeeEee
Q 032392 13 HLDKAVSNLGRKPLKVLVQVNTSGEESK-SGI-DPSSCLGIVEHVRLRCPNLEFSG 66 (142)
Q Consensus 13 ~l~~~a~~~~~~~~~v~I~v~tg~~~~R-~G~-~~~~~~~l~~~i~~~~~~l~l~G 66 (142)
.|.+...+.| ....|.|-.|..++.+| +|+ ...+..+.-+.+. .+.+..+.|
T Consensus 25 ~l~~~F~~~G-~v~~v~~~~d~~tg~~kg~afV~f~~~~~A~~Ai~-~l~g~~~~g 78 (93)
T d1x5ua1 25 LLWELFLQAG-PVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIK-IMDMIKLYG 78 (93)
T ss_dssp HHHHHHHTTS-CEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHH-HSSSCBCSS
T ss_pred HHHHHHHHhC-CccccceeecccccccccceEEEECCHHHHHHHHH-HcCCCEECC
Confidence 4555566666 55555444444333555 553 2233333333344 444555544
No 35
>d1z41a1 c.1.4.1 (A:2-338) NADPH dehydrogenase NamA {Bacillus subtilis [TaxId: 1423]}
Probab=30.57 E-value=85 Score=22.24 Aligned_cols=102 Identities=15% Similarity=0.278 Sum_probs=57.2
Q ss_pred ceEEEEEeCCCCCCccCCChhhHHHHHHHHHccCCCeeEeeEeeec-CC-CCCCcHHHHHHHHHHHHHHHHHhCCCCCCC
Q 032392 26 LKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIG-MP-DYTSTPENFRTLLNCRAEVCKALGMAEDQC 103 (142)
Q Consensus 26 ~~v~I~v~tg~~~~R~G~~~~~~~~l~~~i~~~~~~l~l~Gl~th~-~~-~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~ 103 (142)
-++.|+++... ...-|.+.++..++++.+. +.. +.+.-+.... .+ +....... +..+...+++... ++
T Consensus 209 ~~~~vr~~~~~-~~~~g~~~~~~~~~~~~l~-~~g-~d~~~~s~g~~~~~~~~~~~~~---~~~~~~~ik~~~~----~p 278 (337)
T d1z41a1 209 GPLFVRVSASD-YTDKGLDIADHIGFAKWMK-EQG-VDLIDCSSGALVHADINVFPGY---QVSFAEKIREQAD----MA 278 (337)
T ss_dssp SCEEEEEECCC-CSTTSCCHHHHHHHHHHHH-HTT-CCEEEEECCCSSCCCCCCCTTT---THHHHHHHHHHHC----CE
T ss_pred ccceEEecccc-cccCccchhhhHHHHHHHH-HcC-CcccccccccccccccccCCcc---cHHHHHHHHHhcC----ce
Confidence 45666888664 4566788899999999886 542 4433232111 11 11111111 2233445555533 45
Q ss_pred eEEecC--chhHH-HHHHcC-CcEEecCccccCCCccc
Q 032392 104 ELSMGM--SGDFE-QAIEMG-STSVRIGSTIFGPREYA 137 (142)
Q Consensus 104 ~lS~G~--s~~~~-~a~~~g-~t~VR~G~~ifg~~~~~ 137 (142)
.+..|. ++... .+++.| .|+|-.|..+..+-..+
T Consensus 279 vi~~G~i~~~~~ae~~l~~g~~D~V~~gR~~iadPd~~ 316 (337)
T d1z41a1 279 TGAVGMITDGSMAEEILQNGRADLIFIGRELLRDPFFA 316 (337)
T ss_dssp EEECSSCCSHHHHHHHHHTTSCSEEEECHHHHHCTTHH
T ss_pred EEEeCCcCCHHHHHHHHHCCCcceehhhHHHHhCchHH
Confidence 666665 34433 346777 69999999888776544
No 36
>d2v4jb2 d.58.36.2 (B:2-135) Dissimilatory sulfite reductase subunit beta, DsrB {Desulfovibrio vulgaris [TaxId: 881]}
Probab=30.42 E-value=26 Score=22.30 Aligned_cols=10 Identities=10% Similarity=0.265 Sum_probs=4.4
Q ss_pred HHHHHHHHHH
Q 032392 85 LLNCRAEVCK 94 (142)
Q Consensus 85 ~~~~~~~l~~ 94 (142)
+..+.+.|++
T Consensus 110 v~~L~~eL~~ 119 (134)
T d2v4jb2 110 LKALKEDLAS 119 (134)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3444444444
No 37
>d1mzha_ c.1.10.1 (A:) Deoxyribose-phosphate aldolase DeoC {Aquifex aeolicus [TaxId: 63363]}
Probab=29.56 E-value=75 Score=21.56 Aligned_cols=43 Identities=14% Similarity=0.069 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHhcCCCCceEEEEEeCCCCCCccCCChhhHHHHHHHHH
Q 032392 8 EKIANHLDKAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVR 56 (142)
Q Consensus 8 ~~~~~~l~~~a~~~~~~~~~v~I~v~tg~~~~R~G~~~~~~~~l~~~i~ 56 (142)
.+++....+++.+.| ... |+|+++-...|.+++++..+.+.+.
T Consensus 131 ~~ei~~a~~~a~~aG---adf---iKTSTG~~~~gat~e~v~~m~~~~~ 173 (225)
T d1mzha_ 131 EEEIKKAVEICIEAG---ADF---IKTSTGFAPRGTTLEEVRLIKSSAK 173 (225)
T ss_dssp HHHHHHHHHHHHHHT---CSE---EECCCSCSSSCCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcc---cce---EeecCCCCCCCCCHHHHHHHHHHhC
Confidence 345566666666665 222 4466556667778877665555554
No 38
>d2hqsc1 d.79.7.1 (C:68-173) Peptidoglycan-associated lipoprotein, PAL, periplasmic domain {Escherichia coli [TaxId: 562]}
Probab=29.49 E-value=29 Score=20.26 Aligned_cols=51 Identities=8% Similarity=0.010 Sum_probs=30.8
Q ss_pred hhHHHHHHHHHccCCCeeEeeEeeecCCCCCCc----HHHHHHHHHHHHHHHHHhCCCC
Q 032392 46 SSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTST----PENFRTLLNCRAEVCKALGMAE 100 (142)
Q Consensus 46 ~~~~~l~~~i~~~~~~l~l~Gl~th~~~~~~~~----~~~~~~~~~~~~~l~~~~g~~~ 100 (142)
..+..+++.++ .+|.+++. |..|... .... .-..+|...+.+.|.+. |++.
T Consensus 19 ~~L~~l~~~l~-~~~~~~i~-I~GhtD~-~g~~~~N~~LS~~RA~~V~~~L~~~-Gi~~ 73 (106)
T d2hqsc1 19 QMLDAHANFLR-SNPSYKVT-VEGHADE-RGTPEYNISLGERRANAVKMYLQGK-GVSA 73 (106)
T ss_dssp HHHHHHHHHHH-HCTTCCEE-EEECCCS-SSCHHHHHHHHHHHHHHHHHHHHHT-TCCG
T ss_pred HHHHHHHHHHH-hCCCcEEE-EEecccc-cchhhhhhhHHHHHHhHHHHHHHhc-CCcc
Confidence 45677888888 88876653 4444322 1111 23556677788888876 8763
No 39
>d1h1ya_ c.1.2.2 (A:) D-ribulose-5-phosphate 3-epimerase {Rice (Oryza sativa) [TaxId: 4530]}
Probab=29.14 E-value=76 Score=21.17 Aligned_cols=75 Identities=21% Similarity=0.170 Sum_probs=45.1
Q ss_pred HHHccCCCeeEeeEeeecC-CCCCC-cHHHHHHHHHHHHHHHHHhCCCCCCCeE-EecCch-hHHHHHHcCCcEEecCcc
Q 032392 54 HVRLRCPNLEFSGLMTIGM-PDYTS-TPENFRTLLNCRAEVCKALGMAEDQCEL-SMGMSG-DFEQAIEMGSTSVRIGST 129 (142)
Q Consensus 54 ~i~~~~~~l~l~Gl~th~~-~~~~~-~~~~~~~~~~~~~~l~~~~g~~~~~~~l-S~G~s~-~~~~a~~~g~t~VR~G~~ 129 (142)
.+. ..+.+.+.-+|+.-+ ..-+. ....++++.++ ++. +.+ .... =.|.+. +.....+.|.+.+=.|++
T Consensus 127 ~l~-~~~~~d~vlim~v~PG~~GQ~f~~~~l~kI~~l----~~~-~~~--~~I~VDGGIn~~~i~~l~~aGad~~V~GS~ 198 (220)
T d1h1ya_ 127 LVE-AENPVELVLVMTVEPGFGGQKFMPEMMEKVRAL----RKK-YPS--LDIEVDGGLGPSTIDVAASAGANCIVAGSS 198 (220)
T ss_dssp HHH-SSSCCSEEEEESSCTTCSSCCCCGGGHHHHHHH----HHH-CTT--SEEEEESSCSTTTHHHHHHHTCCEEEESHH
T ss_pred HHh-cccccceEEEEecCCCCcccccchhhhHHHHHH----Hhc-CCC--ceEEEEecCCHHHHHHHHHCCCCEEEECHH
Confidence 344 556677888898644 22222 24567776664 333 433 3322 334443 344457889999999999
Q ss_pred ccCCCcc
Q 032392 130 IFGPREY 136 (142)
Q Consensus 130 ifg~~~~ 136 (142)
||+...+
T Consensus 199 if~~~d~ 205 (220)
T d1h1ya_ 199 IFGAAEP 205 (220)
T ss_dssp HHTSSCH
T ss_pred HHCCCCH
Confidence 9996543
No 40
>d1izca_ c.1.12.5 (A:) Macrophomate synthase {Macrophoma commelinae [TaxId: 108330]}
Probab=28.88 E-value=72 Score=22.55 Aligned_cols=47 Identities=11% Similarity=0.068 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCeEEecCchhHHHHHHcCCcEEecCcc
Q 032392 79 PENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGST 129 (142)
Q Consensus 79 ~~~~~~~~~~~~~l~~~~g~~~~~~~lS~G~s~~~~~a~~~g~t~VR~G~~ 129 (142)
.+..+.+..+.+..++. |.. .....+...+.....+.|+++|-.|+-
T Consensus 229 p~v~~ai~~i~~a~k~~-Gk~---~g~~~~~~~~~~~~~~~G~~~i~~g~D 275 (299)
T d1izca_ 229 PTFVEAMTKFSTAAQRN-GVP---IFGGALSVDMVPSLIEQGYRAIAVQFD 275 (299)
T ss_dssp HHHHHHHHHHHHHHHHT-TCC---EEEECSSGGGHHHHHHTTEEEEEEEEH
T ss_pred HHHHHHHHHHHHHHHHc-CCc---EEeccCCHHHHHHHHHcCCCEEEEhHH
Confidence 35555566666666664 753 222333444455568999999988764
No 41
>d1x7fa2 c.1.8.12 (A:1-244) Outer surface protein, N-terminal domain {Bacillus cereus [TaxId: 1396]}
Probab=28.66 E-value=29 Score=24.24 Aligned_cols=86 Identities=17% Similarity=0.244 Sum_probs=39.9
Q ss_pred CCccCCCh--h--hHHHHHHHHHccCCCeeEeeEee--ecCCCCCCcHHHHHHHHHHHHHHHHHhCCCCCCCeE------
Q 032392 38 ESKSGIDP--S--SCLGIVEHVRLRCPNLEFSGLMT--IGMPDYTSTPENFRTLLNCRAEVCKALGMAEDQCEL------ 105 (142)
Q Consensus 38 ~~R~G~~~--~--~~~~l~~~i~~~~~~l~l~Gl~t--h~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~l------ 105 (142)
+-|+|++. + ...+..+.++ .....-+.+||| |-+. ++.....+++.++.+..++. |++. +.-+
T Consensus 2 ~~~LGiSvY~~~~~~e~~~~yi~-~a~~~Gf~~iFTSL~~~e--~~~~~~~~~~~~l~~~a~~~-g~~v-i~DIsp~~l~ 76 (244)
T d1x7fa2 2 ERKLGISLYPEHSTKEKDMAYIS-AAARHGFSRIFTCLLSVN--RPKEEIVAEFKEIINHAKDN-NMEV-ILDVAPAVFD 76 (244)
T ss_dssp CCEEEEEECGGGSCHHHHHHHHH-HHHTTTEEEEEEEECCC----------HHHHHHHHHHHHT-TCEE-EEEECTTCC-
T ss_pred CceeEEEEccCCCCHHHHHHHHH-HHHHCCCCEEEecCccCC--CCHHHHHHHHHHHHHHHHHC-CCEE-EEEcCHHHHH
Confidence 34667531 1 1233334444 333566888887 3332 22234466677777776664 7531 1111
Q ss_pred EecCc-hhHHHHHHcCCcEEecCc
Q 032392 106 SMGMS-GDFEQAIEMGSTSVRIGS 128 (142)
Q Consensus 106 S~G~s-~~~~~a~~~g~t~VR~G~ 128 (142)
-.|.| .+.....+.|.+-+|.=-
T Consensus 77 ~lg~s~~dl~~~~~lGi~glRlD~ 100 (244)
T d1x7fa2 77 QLGISYSDLSFFAELGADGIRLDV 100 (244)
T ss_dssp -----CCCTHHHHHHTCSEEEESS
T ss_pred HhCCCHHHHHHHHHCCCCEEEEcC
Confidence 23444 234445677999999753
No 42
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.26 E-value=16 Score=20.78 Aligned_cols=53 Identities=11% Similarity=0.139 Sum_probs=26.2
Q ss_pred HHHHHHHhcCCCCceEEEEEeCCCCCCc-cC-CChhhHHHHHHHHHccCCCeeEeeE
Q 032392 13 HLDKAVSNLGRKPLKVLVQVNTSGEESK-SG-IDPSSCLGIVEHVRLRCPNLEFSGL 67 (142)
Q Consensus 13 ~l~~~a~~~~~~~~~v~I~v~tg~~~~R-~G-~~~~~~~~l~~~i~~~~~~l~l~Gl 67 (142)
.|.+...+.| ....|.|-.|..++.+| +| +..++..+....+. .+.+..+.|=
T Consensus 21 ~l~~~F~~~G-~i~~v~i~~d~~~~~~kg~afV~f~~~~~A~~ai~-~l~~~~i~g~ 75 (89)
T d2cqba1 21 VLHAAFIPFG-DITDIQIPLDYETEKHRGFAFVEFELAEDAAAAID-NMNESELFGR 75 (89)
T ss_dssp HHHHHHTTTS-CCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHH-HHTTEEETTE
T ss_pred HHHHHHhhCC-eEEecccccccccccccceeEEEECCHHHHHHHHH-HcCCCEECCE
Confidence 4455666667 56666554443332444 45 33333333333344 4446666664
No 43
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.69 E-value=21 Score=19.62 Aligned_cols=50 Identities=12% Similarity=0.203 Sum_probs=25.5
Q ss_pred HHHHHHHHhcCCCCceEEEEEeCCCCCCc-cCC----ChhhHHHHHHHHHccCCCeeEee
Q 032392 12 NHLDKAVSNLGRKPLKVLVQVNTSGEESK-SGI----DPSSCLGIVEHVRLRCPNLEFSG 66 (142)
Q Consensus 12 ~~l~~~a~~~~~~~~~v~I~v~tg~~~~R-~G~----~~~~~~~l~~~i~~~~~~l~l~G 66 (142)
+.|.++..+.| ....|.|--|...+.+| +|+ +++++...++.+ .+..+.|
T Consensus 17 ~~l~~~f~~~G-~v~~v~i~~~~~~~~~~g~afv~f~~~~~a~~a~~~l----~g~~~~g 71 (82)
T d1fxla1 17 EEFRSLFGSIG-EIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL----NGLRLQT 71 (82)
T ss_dssp HHHHHHHHTTS-CEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHH----TTCEETT
T ss_pred HHHHHHHHHhC-CcccccceeeccCCCceeeEEEEECCHHHHHHHHHHh----CCCEECC
Confidence 34566667777 66666555454332333 453 344444444444 3555544
No 44
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.63 E-value=28 Score=19.11 Aligned_cols=52 Identities=13% Similarity=-0.002 Sum_probs=28.8
Q ss_pred HHHHHHHhcCCCCceEEEEEeCCCCCCc-cC-CChhhHHHHHHHHHccCCCeeEee
Q 032392 13 HLDKAVSNLGRKPLKVLVQVNTSGEESK-SG-IDPSSCLGIVEHVRLRCPNLEFSG 66 (142)
Q Consensus 13 ~l~~~a~~~~~~~~~v~I~v~tg~~~~R-~G-~~~~~~~~l~~~i~~~~~~l~l~G 66 (142)
.|.+...+.| ....|.|-.|..++.+| +| +......+....+. .+.+..+.|
T Consensus 16 ~l~~~F~~~G-~i~~v~i~~d~~tg~~~g~aFV~f~~~~~a~~ai~-~l~g~~~~g 69 (80)
T d1cvja1 16 MLYEKFSPAG-PILSIRVCRDMITRRSLGYAYVNFQQPADAERALD-TMNFDVIKG 69 (80)
T ss_dssp HHHHHHGGGS-CEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHT-TSTTCEETT
T ss_pred HHHHHHHHhC-CEeEEEEEecccccCCCCceEEEECCHHHHHHHHH-HcCCCEECC
Confidence 3455666667 66677666655433443 55 33344444445555 666777666
No 45
>d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma cruzi [TaxId: 5693]}
Probab=25.93 E-value=21 Score=21.93 Aligned_cols=51 Identities=12% Similarity=0.132 Sum_probs=21.1
Q ss_pred HHHHHHhcCCCCceEEEEEeCCCCCCc-cC-CChhhHHHHHHHHHccCCCeeEee
Q 032392 14 LDKAVSNLGRKPLKVLVQVNTSGEESK-SG-IDPSSCLGIVEHVRLRCPNLEFSG 66 (142)
Q Consensus 14 l~~~a~~~~~~~~~v~I~v~tg~~~~R-~G-~~~~~~~~l~~~i~~~~~~l~l~G 66 (142)
|.++..+.| ....|.|-.|-.++.+| +| |......+..+.+. .+.+..+.|
T Consensus 59 l~~~F~~~G-~i~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~-~lng~~~~g 111 (139)
T d1u6fa1 59 LRQLFERYG-PIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIA-GLNGFNILN 111 (139)
T ss_dssp HHHHHHHHS-CEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHH-HTTTEECSS
T ss_pred HHHHHHhhc-cccccccccccccccccceeeEEECCHHHHHHHHH-HhCCCEECC
Confidence 334444445 44445444443322344 44 23333333333344 444555544
No 46
>d3bypa1 d.52.9.1 (A:6-87) Putative Zinc transporter CzrB {Thermus thermophilus [TaxId: 274]}
Probab=25.84 E-value=13 Score=21.13 Aligned_cols=21 Identities=14% Similarity=0.161 Sum_probs=14.6
Q ss_pred CCChhhHHHHHHHHHccCCCee
Q 032392 42 GIDPSSCLGIVEHVRLRCPNLE 63 (142)
Q Consensus 42 G~~~~~~~~l~~~i~~~~~~l~ 63 (142)
|++++++.++.+.+. +.+..+
T Consensus 1 glp~e~~~~I~~~i~-~~~~~~ 21 (82)
T d3bypa1 1 GLPPEEVERIRAFLQ-ERIRGR 21 (82)
T ss_dssp CCCHHHHHHHHHHHH-HHHTTT
T ss_pred CcCHHHHHHHHHHHH-hCCCCC
Confidence 788888888777776 555333
No 47
>d1xrsb1 c.23.6.1 (B:102-261) D-lysine 5,6-aminomutase beta subunit KamE, C-terminal domain {Clostridium sticklandii [TaxId: 1511]}
Probab=25.70 E-value=77 Score=20.16 Aligned_cols=69 Identities=10% Similarity=0.020 Sum_probs=37.4
Q ss_pred HHHHHHHHccCCCeeEeeEeeecCCCCCCcHHHHHHHHHHHHHHHHHhCCCCCCCeEEecCchhHHHHHHcCCcEE
Q 032392 49 LGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSV 124 (142)
Q Consensus 49 ~~l~~~i~~~~~~l~l~Gl~th~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~lS~G~s~~~~~a~~~g~t~V 124 (142)
.++++.+. +. +..+.|+-+..++ .......+.++.+.|++. |....++.+-.|...+-..+.+.|.+.+
T Consensus 69 e~~v~~a~-e~-~~d~VglS~l~t~----~~~h~~~~~~~i~~l~~~-g~~d~v~vivGG~~~~~~~a~~~GaD~~ 137 (160)
T d1xrsb1 69 EDFIKKAV-EL-EADVLLVSQTVTQ----KNVHIQNMTHLIELLEAE-GLRDRFVLLCGGPRINNEIAKELGYDAG 137 (160)
T ss_dssp HHHHHHHH-HT-TCSEEEEECCCCT----TSHHHHHHHHHHHHHHHT-TCGGGSEEEEECTTCCHHHHHTTTCSEE
T ss_pred HHHHHHHH-hc-CCCEEEEeecccc----cchhHHHHHHHHHHHHHc-CCCCceEEEEcCCCCCHHHHHHcCCCEE
Confidence 34555554 33 2566666544321 122344577778888886 7632234455554555555666677654
No 48
>d2cpza1 d.58.7.1 (A:383-484) CUG triplet repeat RNA-binding protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.64 E-value=24 Score=20.50 Aligned_cols=50 Identities=16% Similarity=0.218 Sum_probs=25.3
Q ss_pred HHHHHHHhcCCCCceEEEEEeCCCCCCc-cCC----ChhhHHHHHHHHHccCCCeeEeeE
Q 032392 13 HLDKAVSNLGRKPLKVLVQVNTSGEESK-SGI----DPSSCLGIVEHVRLRCPNLEFSGL 67 (142)
Q Consensus 13 ~l~~~a~~~~~~~~~v~I~v~tg~~~~R-~G~----~~~~~~~l~~~i~~~~~~l~l~Gl 67 (142)
.|.+.....| ....+.+..|-.++.+| +|+ +++++...++. +.+..+.|-
T Consensus 34 ~l~~~F~~~G-~i~~~~~~~~~~~g~~kG~afV~f~~~~~A~~Ai~~----lng~~~~g~ 88 (102)
T d2cpza1 34 DLLQMFMPFG-NVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQS----MNGFQIGMK 88 (102)
T ss_dssp HHHHHHGGGS-CCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHH----HTTCEETTE
T ss_pred HHHHHHHhhc-cccccceeeecccCCCccceEEEeCCHHHHHHHHHH----hCCCEECCE
Confidence 4555666666 56666666654433454 452 33444444443 335555553
No 49
>d1gq6a_ c.42.1.1 (A:) Proclavaminate amidino hydrolase {Streptomyces clavuligerus [TaxId: 1901]}
Probab=25.46 E-value=79 Score=21.90 Aligned_cols=29 Identities=21% Similarity=0.344 Sum_probs=21.5
Q ss_pred CCCCCCccCCChhhHHHHHHHHHccCCCeeEeeE
Q 032392 34 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGL 67 (142)
Q Consensus 34 tg~~~~R~G~~~~~~~~l~~~i~~~~~~l~l~Gl 67 (142)
||+ +.-.|+++.++.++++.+. +.++.|+
T Consensus 239 t~t-P~pgGL~~~e~~~i~~~l~----~~~~vg~ 267 (301)
T d1gq6a_ 239 TGT-PAPGGLLSREVLALLRCVG----DLKPVGF 267 (301)
T ss_dssp BSS-CCSSCBCHHHHHHHGGGGG----GSEEEEE
T ss_pred CCC-CCCCCCCHHHHHHHHHHHc----CCCeEEE
Confidence 455 6778999999888887665 3467787
No 50
>d1kkoa1 c.1.11.2 (A:161-411) beta-Methylaspartase {Citrobacter amalonaticus [TaxId: 35703]}
Probab=25.23 E-value=98 Score=21.17 Aligned_cols=98 Identities=18% Similarity=0.234 Sum_probs=53.6
Q ss_pred eEEEEEeCCC-CCCccCCChhhHHHHHHHHHccCCCeeEeeEeeecCCCCCCcHHHHHHHHHHHHHHHHHhCCCCCCCeE
Q 032392 27 KVLVQVNTSG-EESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCKALGMAEDQCEL 105 (142)
Q Consensus 27 ~v~I~v~tg~-~~~R~G~~~~~~~~l~~~i~~~~~~l~l~Gl~th~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~l 105 (142)
.+.|++|... ..-.+|.+++++.+.++.+.+....+. |+.=.+.+.....+.++.+..+.+.+... |.+ ++.+
T Consensus 72 ~~~i~iD~~~~~~~~~~~~~~~ai~~l~~L~~~~~~~~---l~IEqP~~~~~~~~d~~gl~~l~~~l~~~-g~~--vpI~ 145 (251)
T d1kkoa1 72 HPTLHIDVYGTIGLIFDMDPVRCAEYIASLEKEAQGLP---LYIEGPVDAGNKPDQIRMLTAITKELTRL-GSG--VKIV 145 (251)
T ss_dssp CCEEEEECTTHHHHHTTTCHHHHHHHHHHTGGGGTTSC---EEEECCCCCSSHHHHHHHHHHHHHHHHHH-TCC--CEEE
T ss_pred CcceeeccccccccccCCCHHHHHHHHHHHHHhcCCCc---eeecCCcccccchHHHHHHHHHHHHHhcc-CCC--ceEe
Confidence 3444555431 013567888888888888752322222 22111223333356777788888887766 654 4444
Q ss_pred ---EecCchhHHHHHHcCC-cEEecCccc
Q 032392 106 ---SMGMSGDFEQAIEMGS-TSVRIGSTI 130 (142)
Q Consensus 106 ---S~G~s~~~~~a~~~g~-t~VR~G~~i 130 (142)
|+-+..++..+++.+. +.|.+=..-
T Consensus 146 ~DE~~~t~~d~~~~i~~~a~d~v~iK~~k 174 (251)
T d1kkoa1 146 ADEWCNTYQDIVDFTDAGSCHMVQIKTPD 174 (251)
T ss_dssp ECTTCCSHHHHHHHHHTTCCSEEEECGGG
T ss_pred ccceeCCHHHHHHHHHhCCccceeccccc
Confidence 4444456666665544 777664443
No 51
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.02 E-value=25 Score=20.33 Aligned_cols=52 Identities=19% Similarity=0.262 Sum_probs=25.7
Q ss_pred HHHHHHHhcCCCCceEEEEEeCCCCCCc-cCC-ChhhHHHHHHHHHccCCCeeEee
Q 032392 13 HLDKAVSNLGRKPLKVLVQVNTSGEESK-SGI-DPSSCLGIVEHVRLRCPNLEFSG 66 (142)
Q Consensus 13 ~l~~~a~~~~~~~~~v~I~v~tg~~~~R-~G~-~~~~~~~l~~~i~~~~~~l~l~G 66 (142)
.|.+...+.| ....|.|-.+..++.+| +|+ ...+..+.-+.+. .+.+..+.|
T Consensus 24 ~l~~~f~~~G-~i~~v~i~~~~~tg~~~g~afV~f~~~~~a~~ai~-~l~~~~~~g 77 (104)
T d1p1ta_ 24 QLKDIFSEVG-PVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR-NLNGREFSG 77 (104)
T ss_dssp HHHHHHHTTS-CCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHH-HSSSBSCSS
T ss_pred HHHHhhhccc-cccccccccccceeccCCceEEEECCHHHHHHHHH-HcCCCEECC
Confidence 4455566667 66677666654332444 452 2333333333444 444555555
No 52
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=24.62 E-value=22 Score=20.07 Aligned_cols=50 Identities=14% Similarity=0.242 Sum_probs=24.1
Q ss_pred HHHHHHHHhcCCCCceEEEEEeCCCCCCc-cCC----ChhhHHHHHHHHHccCCCeeEee
Q 032392 12 NHLDKAVSNLGRKPLKVLVQVNTSGEESK-SGI----DPSSCLGIVEHVRLRCPNLEFSG 66 (142)
Q Consensus 12 ~~l~~~a~~~~~~~~~v~I~v~tg~~~~R-~G~----~~~~~~~l~~~i~~~~~~l~l~G 66 (142)
+.|.+...+.| ....|.|-.|..++.+| +|+ +.+++...++.+ .+..+.|
T Consensus 22 ~~l~~~F~~~G-~i~~v~i~~d~~tg~~~g~afV~f~~~~~A~~A~~~l----ng~~l~g 76 (88)
T d1rk8a_ 22 DEIQEKFCDYG-EIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEAL----NGAEIMG 76 (88)
T ss_dssp HHHHHHHGGGS-CEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHHH----TTCEETT
T ss_pred HHHHHHHHHcC-CcccccccccccccccccceeEEECCHHHHHHHHHHc----CCCEECC
Confidence 34555666667 55566555554332443 352 334444444433 3445544
No 53
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.32 E-value=17 Score=20.40 Aligned_cols=43 Identities=14% Similarity=0.232 Sum_probs=22.7
Q ss_pred HHHHHHHhcCCCCceEEEEEeCCCCCCc-cCC----ChhhHHHHHHHHH
Q 032392 13 HLDKAVSNLGRKPLKVLVQVNTSGEESK-SGI----DPSSCLGIVEHVR 56 (142)
Q Consensus 13 ~l~~~a~~~~~~~~~v~I~v~tg~~~~R-~G~----~~~~~~~l~~~i~ 56 (142)
.|.+..++.| ....|.|-.|..++.+| +|+ +++++...++.+.
T Consensus 22 ~L~~~F~~~G-~v~~v~i~~d~~~g~~kg~afV~f~~~~~a~~Ai~~ln 69 (85)
T d1fxla2 22 ELEQLFSQYG-RIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLN 69 (85)
T ss_dssp HHHHHHGGGS-CEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHT
T ss_pred HHHHHHHHhC-CccccccccccccccCCCeeEEEEcCHHHHHHHHHHhC
Confidence 3555666667 56666555554333444 552 4455555555553
No 54
>d1i60a_ c.1.15.4 (A:) Hypothetical protein IolI {Bacillus subtilis [TaxId: 1423]}
Probab=24.29 E-value=93 Score=20.58 Aligned_cols=48 Identities=15% Similarity=0.272 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEEeCCCCCCccCC-ChhhHHHHHHHHHccCCCeeE
Q 032392 9 KIANHLDKAVSNLGRKPLKVLVQVNTSGEESKSGI-DPSSCLGIVEHVRLRCPNLEF 64 (142)
Q Consensus 9 ~~~~~l~~~a~~~~~~~~~v~I~v~tg~~~~R~G~-~~~~~~~l~~~i~~~~~~l~l 64 (142)
+.++.+.+.|++.| +.+.++. .+. ...++ +++++..+++.+ ..|++.+
T Consensus 123 ~~l~~l~~~a~~~G---v~l~lE~-~~~--~~~~~~~~~~~~~ll~~v--~~~~vg~ 171 (278)
T d1i60a_ 123 DVLTELSDIAEPYG---VKIALEF-VGH--PQCTVNTFEQAYEIVNTV--NRDNVGL 171 (278)
T ss_dssp HHHHHHHHHHGGGT---CEEEEEC-CCC--TTBSSCSHHHHHHHHHHH--CCTTEEE
T ss_pred HHHHHHHHHHHHhC---Ceeeeee-ccc--cccccCCHHHHHHHHHHh--hcccccc
Confidence 34555666666766 5666662 231 12333 556777777777 3455443
No 55
>d2fiqa1 c.1.10.7 (A:1-420) Putative tagatose 6-phosphate kinase 1 GatZ {Escherichia coli [TaxId: 562]}
Probab=23.42 E-value=1.4e+02 Score=22.31 Aligned_cols=101 Identities=15% Similarity=0.137 Sum_probs=56.8
Q ss_pred eEecCC--HHHHHHHHHHHHhcCCCCceEEEEEeC---CCCCCccCCChhhHHHHHHHHHc--cCC--CeeEeeEeeecC
Q 032392 2 VEGVGN--EKIANHLDKAVSNLGRKPLKVLVQVNT---SGEESKSGIDPSSCLGIVEHVRL--RCP--NLEFSGLMTIGM 72 (142)
Q Consensus 2 i~svds--~~~~~~l~~~a~~~~~~~~~v~I~v~t---g~~~~R~G~~~~~~~~l~~~i~~--~~~--~l~l~Gl~th~~ 72 (142)
|.||+| +..+++.=+.|.+. ..+|+|+-.. +...+=+|+.|.++.+.+..+.+ .+| +|-+.|= |++
T Consensus 16 i~SvCsa~p~Vi~Aal~~a~~~---~~pvlieAT~NQVnq~GGYtGmtp~dF~~~V~~iA~~~g~~~~~iiLggD--HlG 90 (420)
T d2fiqa1 16 ICSVCSAHPLVIEAALAFDRNS---TRKVLIEATSNQVNQFGGYTGMTPADFREFVFAIADKVGFARERIILGGD--HLG 90 (420)
T ss_dssp EEEECCCCHHHHHHHHHHTTTS---CCCEEEEEETTTBSTTCTTTTBCHHHHHHHHHHHHHHHTCCGGGEEEEEE--EES
T ss_pred eeeeCCCCHHHHHHHHHHHHhc---CCCEEEEecccccccCCCCCCCCHHHHHHHHHHHHHHcCCchhhEEEecC--CCC
Confidence 455554 44555555555554 3678887542 11123467999999988887741 343 3444442 444
Q ss_pred C---CCCCcHHHHHHHHHHHHHHHHHhCCCCCCCeE--EecCc
Q 032392 73 P---DYTSTPENFRTLLNCRAEVCKALGMAEDQCEL--SMGMS 110 (142)
Q Consensus 73 ~---~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~l--S~G~s 110 (142)
. -..+..++.+.-..++...-++ |++ .-|| ||+-.
T Consensus 91 P~~Wq~~~~~~AM~~a~~li~~~v~a-GF~--kIHiD~Sm~ca 130 (420)
T d2fiqa1 91 PNCWQQENVDAAMEKSVELVKAYVRA-GFS--KIHLDASMSCA 130 (420)
T ss_dssp SGGGTTSBHHHHHHHHHHHHHHHHHT-TCC--EEEECCCSCCB
T ss_pred ChhhcCCCHHHHHHHHHHHHHHHHHc-CCC--EEEecCCcCCC
Confidence 2 1222345666666666655555 876 5666 66544
No 56
>d1woha_ c.42.1.1 (A:) Agmatinase {Deinococcus radiodurans [TaxId: 1299]}
Probab=23.05 E-value=1.1e+02 Score=21.00 Aligned_cols=36 Identities=17% Similarity=0.227 Sum_probs=25.6
Q ss_pred CCCCCCccCCChhhHHHHHHHHHccCCCeeEeeE--eeecCC
Q 032392 34 TSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGL--MTIGMP 73 (142)
Q Consensus 34 tg~~~~R~G~~~~~~~~l~~~i~~~~~~l~l~Gl--~th~~~ 73 (142)
||+ ..-.|++++++.++++.+. ..+ ++.|+ .-+.+.
T Consensus 239 tgt-p~pgGl~~~e~~~~l~~l~-~~~--~v~g~DivE~~P~ 276 (303)
T d1woha_ 239 TSS-PEPDGLTYAQGMKILAAAA-ANN--TVVGLDLVELAPN 276 (303)
T ss_dssp BSS-CCSSCBCHHHHHHHHHHHH-HHS--EEEEEEEECBCGG
T ss_pred CCC-CCCCCCCHHHHHHHHHHHh-ccC--CEEEEEEEEECCC
Confidence 455 6788999999999999987 554 45555 445443
No 57
>d1twda_ c.1.30.1 (A:) Copper homeostasis protein CutC {Shigella flexneri [TaxId: 623]}
Probab=22.95 E-value=1.1e+02 Score=21.02 Aligned_cols=28 Identities=29% Similarity=0.407 Sum_probs=17.9
Q ss_pred CChhhHHHHHHHHHccCCCeeEeeE-eeec
Q 032392 43 IDPSSCLGIVEHVRLRCPNLEFSGL-MTIG 71 (142)
Q Consensus 43 ~~~~~~~~l~~~i~~~~~~l~l~Gl-~th~ 71 (142)
-+.+|+....+.+. .+..+-..|+ +...
T Consensus 66 Ys~~E~~~M~~di~-~~k~~G~dGvV~G~L 94 (247)
T d1twda_ 66 YSDGEFAAILEDVR-TVRELGFPGLVTGVL 94 (247)
T ss_dssp CCHHHHHHHHHHHH-HHHHTTCSEEEECCB
T ss_pred CCHHHHHHHHHHHH-HHHHcCCCeEEEEEE
Confidence 36677777777776 5556667777 4344
No 58
>d3bofa2 c.1.26.1 (A:1-300) Cobalamin-dependent methionine synthase MetH, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=22.89 E-value=1.1e+02 Score=20.86 Aligned_cols=63 Identities=11% Similarity=0.149 Sum_probs=39.2
Q ss_pred eEecCCHHHHHHHHHHHHhcCCCCceEEEEEeCCC-CCCccCCChhhHHHHHHHHHccCCCeeEeeEeee
Q 032392 2 VEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSG-EESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTI 70 (142)
Q Consensus 2 i~svds~~~~~~l~~~a~~~~~~~~~v~I~v~tg~-~~~R~G~~~~~~~~l~~~i~~~~~~l~l~Gl~th 70 (142)
..|+.|.++++.+-+.+++.+ +++.+.+.+..+. +....|.+++ +.+..+. .. ++...|+.+.
T Consensus 145 ~ET~~~~~E~~~~~~~~~~~~-~~~~~~~s~~~~~~g~~~~G~~~~---~~~~~~~-~~-~~~~~~inc~ 208 (300)
T d3bofa2 145 FETFSDILELKAAVLAAREVS-RDVFLIAHMTFDEKGRSLTGTDPA---NFAITFD-EL-DIDALGINCS 208 (300)
T ss_dssp EEEECCHHHHHHHHHHHHHHC-SSSCEEEEECCCTTSCCTTCCCHH---HHHHHHH-TS-SCSEEEEESS
T ss_pred eeeeecHHHHHHHHHhHHhhc-cccceEEEEEecCCCCcccccchh---HHHhhhc-cc-ccchHhhccc
Confidence 468899999999988888876 6766655554331 1345565544 3444444 43 3666666543
No 59
>d2akja2 d.58.36.1 (A:22-174) Ferredoxin--nitrite reductase, NIR {Spinach (Spinacia oleracea) [TaxId: 3562]}
Probab=22.72 E-value=40 Score=21.62 Aligned_cols=47 Identities=15% Similarity=0.148 Sum_probs=20.8
Q ss_pred CHHHHHHHHHHHHhcCCCCceEEEEEeCCCCCCccCCChhhHHHHHHHHH
Q 032392 7 NEKIANHLDKAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVR 56 (142)
Q Consensus 7 s~~~~~~l~~~a~~~~~~~~~v~I~v~tg~~~~R~G~~~~~~~~l~~~i~ 56 (142)
+.+++..|+++|.+.| ..-. |++-|.....=.||..+++.++++.+.
T Consensus 97 t~~Ql~~ladiA~~yg-~~G~--l~lTtRQniql~gI~~~dl~~i~~~L~ 143 (153)
T d2akja2 97 TSEQTRYLASVIKKYG-KDGC--ADVTTRQNWQIRGVVLPDVPEIIKGLE 143 (153)
T ss_dssp EHHHHHHHHHHHHTTG-GGCC--EEECTTSCEEEEEECGGGHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHC-CCCc--EeeCCCceEEecCCCHHHHHHHHHHHH
Confidence 4455555555555543 1111 233333222223455555555555554
No 60
>d1q7sa_ c.131.1.1 (A:) Bit1 (Cgi-147) {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.41 E-value=80 Score=19.13 Aligned_cols=31 Identities=23% Similarity=0.162 Sum_probs=22.4
Q ss_pred eEecCCHHHHHHHHHHHHhcCCCCceEEEEEeCC
Q 032392 2 VEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTS 35 (142)
Q Consensus 2 i~svds~~~~~~l~~~a~~~~~~~~~v~I~v~tg 35 (142)
+..++|.+.+..|.+.|.+.| ++.++=.|.|
T Consensus 55 vl~v~~e~~l~~l~~~a~~~~---l~~~~i~DAG 85 (117)
T d1q7sa_ 55 VVKAPDEETLIALLAHAKMLG---LTVSLIQDAG 85 (117)
T ss_dssp EEEESSHHHHHHHHHHHHHTT---CCEEEEEECS
T ss_pred EEecCCHHHHHHHHHHHHHCC---CCEEEEEcCC
Confidence 456888999999999888876 4455545555
No 61
>d1vkma_ c.138.1.1 (A:) Hypothetical protein TM1464 {Thermotoga maritima [TaxId: 2336]}
Probab=21.44 E-value=51 Score=23.61 Aligned_cols=44 Identities=5% Similarity=0.069 Sum_probs=36.7
Q ss_pred CCHHHHHHHHHHHHhcCCCCceEEEEEeCCCCCCccCCChhhHHHHHH
Q 032392 6 GNEKIANHLDKAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVE 53 (142)
Q Consensus 6 ds~~~~~~l~~~a~~~~~~~~~v~I~v~tg~~~~R~G~~~~~~~~l~~ 53 (142)
+|++.+..+.++..+.| .+|--|-|--| .-+.|++.+++..+.+
T Consensus 37 ~N~~~a~~~e~~vr~~G--a~PAtiai~~G--~~~vGl~~~ele~la~ 80 (292)
T d1vkma_ 37 EAIELFRRAKEISREKG--FQLAVIGILKG--KIVAGMSEEELEAMMR 80 (292)
T ss_dssp HHHHHHHHHHHHHHHHT--CEEEEEEEETT--EEEESCCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHCC--CcceeEEEECC--eeeecCCHHHHHHHhh
Confidence 57899999999999987 57777788888 6899999988877765
No 62
>d2u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.94 E-value=22 Score=19.91 Aligned_cols=52 Identities=6% Similarity=0.049 Sum_probs=25.0
Q ss_pred HHHHHHHhcCCCCceEEEEEeCCCCCCc-cCC-ChhhHHHHHHHHHccCCCeeEee
Q 032392 13 HLDKAVSNLGRKPLKVLVQVNTSGEESK-SGI-DPSSCLGIVEHVRLRCPNLEFSG 66 (142)
Q Consensus 13 ~l~~~a~~~~~~~~~v~I~v~tg~~~~R-~G~-~~~~~~~l~~~i~~~~~~l~l~G 66 (142)
.|.+..++.| ....|.|-.|..++.+| +|+ ...+..+....+. .+.+..+.|
T Consensus 17 ~l~~~F~~~G-~v~~v~i~~d~~tg~~rg~aFV~f~~~~~A~~a~~-~l~~~~l~g 70 (85)
T d2u2fa_ 17 QVKELLTSFG-PLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIA-GLNGMQLGD 70 (85)
T ss_dssp HHHHHHTSSS-CEEEEEEECCCSSSCCCCEEEEEESSSHHHHHHHH-TSSSCCCSS
T ss_pred HHHHHHHhcC-ccceEEeeccccccccceeEEEEECCHHHHHHHHH-HhCCCEECC
Confidence 3455666667 66666555543322333 452 2233333333444 555555555
No 63
>d3erja1 c.131.1.1 (A:2-117) Hypothetical protein AF2095 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=20.79 E-value=59 Score=19.76 Aligned_cols=31 Identities=16% Similarity=0.088 Sum_probs=23.4
Q ss_pred eEecCCHHHHHHHHHHHHhcCCCCceEEEEEeCC
Q 032392 2 VEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTS 35 (142)
Q Consensus 2 i~svds~~~~~~l~~~a~~~~~~~~~v~I~v~tg 35 (142)
+..++|.+.+..|.+.|.+.| ++.++=.|.|
T Consensus 51 vl~v~~e~~L~~l~~~a~~~~---l~~~~i~DAG 81 (116)
T d3erja1 51 VLKVKSLEELLGIKHKAESLG---LVTGLVQDAG 81 (116)
T ss_dssp EEEESSHHHHHHHHHHHHHHT---CCEEEECCTT
T ss_pred EEEeCCHHHHHHHHHHHHHCC---CCEEEEEcCC
Confidence 456889999999999998876 5565555544
No 64
>d1o0ya_ c.1.10.1 (A:) Deoxyribose-phosphate aldolase DeoC {Thermotoga maritima [TaxId: 2336]}
Probab=20.64 E-value=1.3e+02 Score=20.74 Aligned_cols=41 Identities=15% Similarity=-0.074 Sum_probs=23.2
Q ss_pred HHHHHHHHHHhcCCCCceEEEEEeCCCCCCccCCChhhHHHHHHHHH
Q 032392 10 IANHLDKAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVR 56 (142)
Q Consensus 10 ~~~~l~~~a~~~~~~~~~v~I~v~tg~~~~R~G~~~~~~~~l~~~i~ 56 (142)
+..+..+++.+.| .. + |+|+++-...|..++++.-+.+.+.
T Consensus 166 e~~~a~~ia~~aG---ad-f--vKTSTGf~~~gat~e~V~~m~~~~~ 206 (251)
T d1o0ya_ 166 EKIAACVISKLAG---AH-F--VKTSTGFGTGGATAEDVHLMKWIVG 206 (251)
T ss_dssp HHHHHHHHHHHTT---CS-E--EECCCSSSSCCCCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhC---cc-e--eeccCCCCCCCcCHHHHHHHHHHhC
Confidence 3445666666666 22 2 4455545666778777655554444
No 65
>d2masa_ c.70.1.1 (A:) Inosine-uridine nucleoside N-ribohydrolase, IU-NH {Crithidia fasciculata [TaxId: 5656]}
Probab=20.27 E-value=80 Score=21.97 Aligned_cols=26 Identities=15% Similarity=0.215 Sum_probs=19.9
Q ss_pred hhHHHHHHHHHccCCCeeEeeEeeecCC
Q 032392 46 SSCLGIVEHVRLRCPNLEFSGLMTIGMP 73 (142)
Q Consensus 46 ~~~~~l~~~i~~~~~~l~l~Gl~th~~~ 73 (142)
+++..++-.+ ..|.+++.||-+..+.
T Consensus 13 DDa~Al~~al--~~p~vel~gIt~v~GN 38 (313)
T d2masa_ 13 DDAVAILLAH--GNPEIELLAITTVVGN 38 (313)
T ss_dssp HHHHHHHHHH--HCTTEEEEEEEECSSS
T ss_pred HHHHHHHHHh--hCCCcEEEEEEEccCC
Confidence 6776666655 5788999999887764
No 66
>d1rlka_ c.131.1.1 (A:) Hypothetical protein TA0108 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=20.22 E-value=77 Score=19.18 Aligned_cols=31 Identities=10% Similarity=0.148 Sum_probs=22.1
Q ss_pred eEecCCHHHHHHHHHHHHhcCCCCceEEEEEeCC
Q 032392 2 VEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTS 35 (142)
Q Consensus 2 i~svds~~~~~~l~~~a~~~~~~~~~v~I~v~tg 35 (142)
+..++|.+.+..|.+.|.+.| ++.++=.|.|
T Consensus 54 vl~v~~e~~L~~l~~~a~~~~---l~~~~v~DAG 84 (116)
T d1rlka_ 54 VVKVNDLDEIMEIKRMADSMG---IVNEIVQDRG 84 (116)
T ss_dssp EEEESSHHHHHHHHHHHHHHT---CCEEEEECCC
T ss_pred EEEeCCHHHHHHHHHHHHHCC---CCEEEEECCC
Confidence 456888999999999888876 4454444544
No 67
>d1eepa_ c.1.5.1 (A:) Inosine monophosphate dehydrogenase (IMPDH) {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]}
Probab=20.18 E-value=78 Score=23.17 Aligned_cols=40 Identities=18% Similarity=0.229 Sum_probs=28.4
Q ss_pred HHHHHHHHHHhCCCCCCCeEEecCchhHHHH---HHcCCcEEecCcc
Q 032392 86 LNCRAEVCKALGMAEDQCELSMGMSGDFEQA---IEMGSTSVRIGST 129 (142)
Q Consensus 86 ~~~~~~l~~~~g~~~~~~~lS~G~s~~~~~a---~~~g~t~VR~G~~ 129 (142)
.++...+++.+ .+ ..+.+|+-.+++.+ .+.|.+-||+|..
T Consensus 180 ~~~i~~ik~~~-~~---v~vIaGNV~T~e~a~~L~~~GaD~VkVGiG 222 (388)
T d1eepa_ 180 IELIKKIKTKY-PN---LDLIAGNIVTKEAALDLISVGADCLKVGIG 222 (388)
T ss_dssp HHHHHHHHHHC-TT---CEEEEEEECSHHHHHHHHTTTCSEEEECSS
T ss_pred HHHHHHHHHHC-CC---CceeeccccCHHHHHHHHhcCCCeeeeccc
Confidence 45566677653 33 45777888887765 5889999999975
Done!