Query 032393
Match_columns 142
No_of_seqs 135 out of 1598
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 22:09:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032393.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032393hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iwl_A Copper transport protei 99.6 4.2E-15 1.4E-19 95.0 8.2 66 29-97 2-67 (68)
2 1cc8_A Protein (metallochapero 99.5 1.7E-13 5.8E-18 88.0 8.9 68 28-97 4-72 (73)
3 3dxs_X Copper-transporting ATP 99.5 2.7E-13 9.3E-18 86.9 8.4 68 28-96 1-71 (74)
4 4a4j_A Pacszia, cation-transpo 99.5 5.2E-13 1.8E-17 84.3 9.4 66 29-95 2-69 (69)
5 2crl_A Copper chaperone for su 99.4 3.1E-12 1.1E-16 87.9 10.5 73 27-101 17-89 (98)
6 3fry_A Probable copper-exporti 99.4 1.2E-12 4.1E-17 84.3 7.9 67 27-97 3-70 (73)
7 2roe_A Heavy metal binding pro 99.3 9.4E-12 3.2E-16 77.5 7.3 62 32-95 3-65 (66)
8 2xmw_A PACS-N, cation-transpor 99.3 4.6E-11 1.6E-15 74.2 9.1 66 29-95 3-70 (71)
9 2xmm_A SSR2857 protein, ATX1; 99.2 1.1E-11 3.8E-16 75.5 5.8 61 30-92 2-63 (64)
10 1mwy_A ZNTA; open-faced beta-s 99.2 6E-11 2E-15 75.0 9.4 67 28-95 2-69 (73)
11 1aw0_A Menkes copper-transport 99.2 5.5E-11 1.9E-15 74.2 8.9 66 29-95 3-71 (72)
12 1osd_A MERP, hypothetical prot 99.2 3.5E-11 1.2E-15 75.0 7.9 66 29-95 3-71 (72)
13 2l3m_A Copper-ION-binding prot 99.2 5E-11 1.7E-15 74.3 8.5 64 28-92 4-70 (71)
14 2g9o_A Copper-transporting ATP 99.2 6.2E-11 2.1E-15 79.3 8.9 69 30-99 4-78 (90)
15 1cpz_A Protein (COPZ); copper 99.2 6.6E-11 2.3E-15 72.8 8.2 63 32-95 3-68 (68)
16 3cjk_B Copper-transporting ATP 99.2 9.9E-11 3.4E-15 74.0 9.2 66 30-96 3-71 (75)
17 1fvq_A Copper-transporting ATP 99.2 8.1E-11 2.8E-15 73.4 7.9 66 30-96 3-70 (72)
18 2qif_A Copper chaperone COPZ; 99.2 1.7E-10 5.6E-15 70.3 9.1 63 29-92 2-67 (69)
19 2kt2_A Mercuric reductase; nme 99.2 7.1E-11 2.4E-15 73.4 7.3 63 32-95 3-67 (69)
20 1y3j_A Copper-transporting ATP 99.2 6.3E-11 2.1E-15 75.6 7.0 69 28-97 2-73 (77)
21 1q8l_A Copper-transporting ATP 99.2 8.7E-11 3E-15 76.9 7.8 70 28-98 8-80 (84)
22 1opz_A Potential copper-transp 99.2 1.6E-10 5.6E-15 72.3 8.4 68 27-95 4-74 (76)
23 1kvi_A Copper-transporting ATP 99.2 1.1E-10 3.6E-15 74.7 7.6 68 28-96 7-77 (79)
24 2ldi_A Zinc-transporting ATPas 99.2 1.3E-10 4.5E-15 71.5 7.3 65 28-93 2-69 (71)
25 2k2p_A Uncharacterized protein 99.2 6.3E-11 2.2E-15 79.2 6.3 64 27-92 20-84 (85)
26 1yjr_A Copper-transporting ATP 99.1 2E-10 6.8E-15 72.1 7.9 67 29-96 4-73 (75)
27 1yg0_A COP associated protein; 99.1 1.2E-10 4.2E-15 71.2 6.7 62 30-92 2-65 (66)
28 2kyz_A Heavy metal binding pro 99.1 9.9E-11 3.4E-15 73.1 5.6 62 30-95 2-64 (67)
29 1jww_A Potential copper-transp 99.1 2.7E-10 9.2E-15 72.5 7.8 68 29-97 3-73 (80)
30 2kkh_A Putative heavy metal tr 99.1 4.5E-10 1.5E-14 75.3 9.0 72 27-99 14-88 (95)
31 2ew9_A Copper-transporting ATP 99.1 3.8E-10 1.3E-14 80.0 8.5 66 29-95 80-148 (149)
32 1qup_A Superoxide dismutase 1 99.1 3.9E-10 1.3E-14 88.6 9.0 70 29-100 6-75 (222)
33 2ofg_X Zinc-transporting ATPas 99.1 6E-10 2E-14 77.5 8.9 68 27-95 6-76 (111)
34 1p6t_A Potential copper-transp 99.1 4.6E-10 1.6E-14 80.1 7.9 69 29-98 74-145 (151)
35 1jk9_B CCS, copper chaperone f 99.0 1.2E-09 4.2E-14 87.3 7.9 70 28-99 6-75 (249)
36 2rop_A Copper-transporting ATP 98.9 3.2E-09 1.1E-13 80.2 8.8 69 29-98 122-193 (202)
37 2ew9_A Copper-transporting ATP 98.9 6.1E-09 2.1E-13 73.7 8.7 68 28-96 3-73 (149)
38 2aj0_A Probable cadmium-transp 98.9 4E-09 1.4E-13 66.2 5.7 57 30-92 4-61 (71)
39 2rop_A Copper-transporting ATP 98.7 9.6E-08 3.3E-12 72.0 8.5 68 27-95 18-91 (202)
40 1p6t_A Potential copper-transp 98.5 3E-07 1E-11 65.3 8.1 64 28-92 5-71 (151)
41 3j09_A COPA, copper-exporting 98.5 2.3E-07 7.9E-12 83.3 8.7 64 29-93 2-68 (723)
42 2x3d_A SSO6206; unknown functi 91.3 1.1 3.8E-05 30.7 7.4 67 28-96 4-79 (96)
43 2raq_A Conserved protein MTH88 88.5 0.8 2.7E-05 31.5 4.9 67 28-96 6-80 (97)
44 3bpd_A Uncharacterized protein 87.8 0.83 2.8E-05 31.5 4.6 66 28-95 6-79 (100)
45 3cq1_A Putative uncharacterize 80.1 1.7 5.7E-05 29.2 3.5 35 30-64 42-82 (103)
46 3lno_A Putative uncharacterize 80.0 1.5 5.1E-05 29.9 3.2 36 30-65 45-87 (108)
47 1uwd_A Hypothetical protein TM 77.3 1.6 5.6E-05 29.2 2.7 35 30-64 43-83 (103)
48 4gwb_A Peptide methionine sulf 76.0 4.8 0.00016 30.0 5.2 46 40-85 9-71 (168)
49 1fvg_A Peptide methionine sulf 68.4 7 0.00024 29.9 4.7 46 40-85 50-116 (199)
50 3bqh_A PILB, peptide methionin 64.4 8.2 0.00028 29.4 4.3 46 40-85 9-75 (193)
51 2jsx_A Protein NAPD; TAT, proo 64.4 18 0.00063 24.1 5.7 46 40-85 16-61 (95)
52 1nwa_A Peptide methionine sulf 61.1 11 0.00039 28.8 4.6 46 40-85 32-94 (203)
53 1ff3_A Peptide methionine sulf 60.8 12 0.0004 28.9 4.7 46 40-85 49-115 (211)
54 2j89_A Methionine sulfoxide re 60.4 12 0.0004 29.9 4.7 46 40-85 101-167 (261)
55 3e0m_A Peptide methionine sulf 51.9 18 0.00063 29.5 4.6 46 40-85 9-73 (313)
56 3v4k_A DNA DC->DU-editing enzy 50.8 38 0.0013 25.9 6.1 63 29-97 100-163 (203)
57 2cpq_A FragIle X mental retard 47.6 57 0.002 21.6 5.9 60 24-85 10-73 (91)
58 2nyt_A Probable C->U-editing e 47.0 20 0.00069 26.9 3.9 61 30-96 84-146 (190)
59 3ady_A DOTD; 3-layer(BAB) sand 40.1 31 0.001 25.1 3.8 37 64-101 64-100 (148)
60 3gv1_A Disulfide interchange p 39.5 59 0.002 22.7 5.3 29 27-56 14-42 (147)
61 3lvj_C Sulfurtransferase TUSA; 36.9 78 0.0027 19.9 6.0 55 31-95 11-67 (82)
62 1jdq_A TM006 protein, hypothet 36.2 92 0.0031 20.5 6.1 56 31-96 27-84 (98)
63 3hz7_A Uncharacterized protein 33.2 50 0.0017 21.3 3.7 52 33-95 4-59 (87)
64 3pim_A Peptide methionine sulf 31.9 21 0.00073 26.9 1.9 47 36-85 25-100 (187)
65 1t1v_A SH3BGRL3, SH3 domain-bi 26.9 72 0.0024 19.9 3.6 33 30-63 3-40 (93)
66 3vow_A Probable DNA DC->DU-edi 26.4 35 0.0012 25.8 2.3 62 30-97 87-150 (190)
67 3gn3_A Putative protein-disulf 26.0 41 0.0014 24.2 2.6 26 27-52 14-42 (182)
68 2hiy_A Hypothetical protein; C 26.0 84 0.0029 23.1 4.3 47 45-93 26-76 (183)
69 2ko1_A CTR148A, GTP pyrophosph 24.7 1.2E+02 0.0041 18.2 5.0 32 30-61 46-77 (88)
70 3pro_C Alpha-lytic protease; P 22.4 92 0.0031 22.8 3.9 36 53-89 113-148 (166)
71 1je3_A EC005, hypothetical 8.6 21.1 1.1E+02 0.0039 20.1 3.8 55 31-95 28-84 (97)
72 3gmf_A Protein-disulfide isome 20.1 65 0.0022 23.7 2.7 20 26-45 14-33 (205)
No 1
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=99.60 E-value=4.2e-15 Score=95.01 Aligned_cols=66 Identities=29% Similarity=0.502 Sum_probs=62.6
Q ss_pred ceEEEEEeccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEeccCCCHHHHHHHHHhccCCcEEEcCC
Q 032393 29 PEIVLKVDMHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSGRKVELISP 97 (142)
Q Consensus 29 ~~i~lkV~M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~~vd~~~I~~~I~kk~G~~aelis~ 97 (142)
.++.|.|+|+|.+|+.+|+++|.+++|| ++.+|+.+++++|.+. +++..|..+|+ ++||.+.++++
T Consensus 2 ~~~~~~vgm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~-~~~~~i~~~i~-~~Gy~~~~~~~ 67 (68)
T 3iwl_A 2 PKHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESE-HSMDTLLATLK-KTGKTVSYLGL 67 (68)
T ss_dssp CEEEEEECCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEES-SCHHHHHHHHH-TTCSCEEEEEC
T ss_pred ceEEEEECcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEec-CCHHHHHHHHH-HcCCceEecCC
Confidence 4678889999999999999999999999 9999999999999997 89999999999 89999999986
No 2
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=99.49 E-value=1.7e-13 Score=87.96 Aligned_cols=68 Identities=22% Similarity=0.298 Sum_probs=62.8
Q ss_pred CceEEEEEeccchhHHHHHHHHhhCCC-CccEEEEecCCCEEEEeccCCCHHHHHHHHHhccCCcEEEcCC
Q 032393 28 TPEIVLKVDMHCEACARKVARALKGFE-GVDDITADSKASKVVVKGKTADPIKVCERLQKKSGRKVELISP 97 (142)
Q Consensus 28 ~~~i~lkV~M~C~~Ca~kIekaL~~i~-GV~~V~vd~~~~kVtV~g~~vd~~~I~~~I~kk~G~~aelis~ 97 (142)
+.++.|.|+|+|.+|+.+|+++|.+++ ||.++.+|+.+++++|.+. +++..|..+|. ++||.+.++++
T Consensus 4 m~~~~~~v~m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~-~~~~~i~~~i~-~~Gy~~~~~~~ 72 (73)
T 1cc8_A 4 IKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTT-LPYDFILEKIK-KTGKEVRSGKQ 72 (73)
T ss_dssp CEEEEEEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEES-SCHHHHHHHHH-TTSSCEEEEEE
T ss_pred ceEEEEEEeeECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEe-CCHHHHHHHHH-HhCCCceeeec
Confidence 456789999999999999999999999 9999999999999999987 89999999999 89999988753
No 3
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=99.46 E-value=2.7e-13 Score=86.89 Aligned_cols=68 Identities=22% Similarity=0.336 Sum_probs=61.6
Q ss_pred CceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcEEEcC
Q 032393 28 TPEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKVELIS 96 (142)
Q Consensus 28 ~~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~aelis 96 (142)
+.++.|.|. |+|.+|+.+|+++|++++||.++.+|+.+++++|.++ .+++..|..+|+ .+||.+.+++
T Consensus 1 M~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~ 71 (74)
T 3dxs_X 1 MRKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIE-DAGFEAEILA 71 (74)
T ss_dssp CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHH-HHTCEEEEEE
T ss_pred CcEEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HCCCceEEcc
Confidence 356789995 9999999999999999999999999999999999754 368999999999 8999998875
No 4
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=99.46 E-value=5.2e-13 Score=84.30 Aligned_cols=66 Identities=21% Similarity=0.468 Sum_probs=59.8
Q ss_pred ceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc-CCCHHHHHHHHHhccCCcEEEc
Q 032393 29 PEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK-TADPIKVCERLQKKSGRKVELI 95 (142)
Q Consensus 29 ~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~-~vd~~~I~~~I~kk~G~~aeli 95 (142)
+++.|.|+ |+|.+|+.+|+++|.+++||.++.+|+.+++++|.+. .+++..|..+|. .+||.+.++
T Consensus 2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~-~~Gy~~~~~ 69 (69)
T 4a4j_A 2 QTINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVE-RAGYHARVL 69 (69)
T ss_dssp EEEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTCCHHHHHHHHH-HTTCEEEEC
T ss_pred CEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHH-HcCCceEeC
Confidence 46789996 9999999999999999999999999999999999832 389999999999 899998864
No 5
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.39 E-value=3.1e-12 Score=87.88 Aligned_cols=73 Identities=23% Similarity=0.382 Sum_probs=66.7
Q ss_pred CCceEEEEEeccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEeccCCCHHHHHHHHHhccCCcEEEcCCCCCC
Q 032393 27 ETPEIVLKVDMHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSGRKVELISPLPKP 101 (142)
Q Consensus 27 ~~~~i~lkV~M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~~vd~~~I~~~I~kk~G~~aelis~~p~~ 101 (142)
...++.|.|+|+|.+|+.+|+++|.+++||.++.+|+.+++++|.+. +++..|..+|. ++||.+.++......
T Consensus 17 ~~~~~~l~V~m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~-~~~~~i~~~i~-~~Gy~~~~~~~~~~~ 89 (98)
T 2crl_A 17 TLCTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTT-LPSQEVQALLE-GTGRQAVLKGMGSGQ 89 (98)
T ss_dssp CCEEEEEEECCCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEES-SCHHHHHHHHH-TTTSCEEEEESCCCC
T ss_pred cceEEEEEEeeECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEe-CCHHHHHHHHH-HhCCceEEccCCCCc
Confidence 45667899999999999999999999999999999999999999987 89999999999 899999998876644
No 6
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=99.39 E-value=1.2e-12 Score=84.35 Aligned_cols=67 Identities=24% Similarity=0.390 Sum_probs=62.0
Q ss_pred CCceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEeccCCCHHHHHHHHHhccCCcEEEcCC
Q 032393 27 ETPEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSGRKVELISP 97 (142)
Q Consensus 27 ~~~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~~vd~~~I~~~I~kk~G~~aelis~ 97 (142)
.+.+++|.|. |+|.+|+.+|+++|.+ +||..+.+|+.+++++|.++ ++..|..+|+ .+||.+.++++
T Consensus 3 ~m~~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~--~~~~i~~~i~-~~Gy~~~~~~~ 70 (73)
T 3fry_A 3 SVEKIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE--DVDKYIKAVE-AAGYQAKLRSS 70 (73)
T ss_dssp CCEEEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG--GHHHHHHHHH-HTTCEEEECCS
T ss_pred ccEEEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC--CHHHHHHHHH-HcCCceEecCc
Confidence 4567899996 9999999999999999 99999999999999999987 8999999999 89999998874
No 7
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=99.29 E-value=9.4e-12 Score=77.46 Aligned_cols=62 Identities=32% Similarity=0.635 Sum_probs=57.1
Q ss_pred EEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEeccCCCHHHHHHHHHhccCCcEEEc
Q 032393 32 VLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSGRKVELI 95 (142)
Q Consensus 32 ~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~~vd~~~I~~~I~kk~G~~aeli 95 (142)
.|.|. |+|.+|+.+|+++|.+++||.++.+|+.+++++|.+. +++..|...|. .+||.+..+
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~-~~~~~i~~~i~-~~Gy~~~~~ 65 (66)
T 2roe_A 3 KLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGT-ADPKALVQAVE-EEGYKAEVL 65 (66)
T ss_dssp CEEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEECSC-CCHHHHHHHHH-TTTCEEEEC
T ss_pred EEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEECCC-CCHHHHHHHHH-HcCCCcEec
Confidence 58895 9999999999999999999999999999999999665 89999999999 899988765
No 8
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A
Probab=99.26 E-value=4.6e-11 Score=74.15 Aligned_cols=66 Identities=23% Similarity=0.476 Sum_probs=57.2
Q ss_pred ceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc-CCCHHHHHHHHHhccCCcEEEc
Q 032393 29 PEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK-TADPIKVCERLQKKSGRKVELI 95 (142)
Q Consensus 29 ~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~-~vd~~~I~~~I~kk~G~~aeli 95 (142)
..+.|.|. |+|.+|+..|+++|..++||.++.+|+.+++++|.++ .++...|...|. .+||.+.++
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~-~~G~~~~~~ 70 (71)
T 2xmw_A 3 QTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVE-RAGYHARVL 70 (71)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC---CHHHHHHHHH-HHTCEEEEE
T ss_pred cEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCHHHHHHHHH-HcCCCceeC
Confidence 35679996 9999999999999999999999999999999999754 267888999999 899987654
No 9
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=99.25 E-value=1.1e-11 Score=75.54 Aligned_cols=61 Identities=25% Similarity=0.432 Sum_probs=56.1
Q ss_pred eEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEeccCCCHHHHHHHHHhccCCcE
Q 032393 30 EIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSGRKV 92 (142)
Q Consensus 30 ~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~~vd~~~I~~~I~kk~G~~a 92 (142)
++.|.|. |+|.+|+.+|+++|..++||.++.+|+.+++++|.+. .+...|...|. .+||.+
T Consensus 2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~-~~~~~i~~~i~-~~G~~~ 63 (64)
T 2xmm_A 2 TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSA-LGEEQLRTAIA-SAGYEV 63 (64)
T ss_dssp CEEEECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEECS-SCHHHHHHHHH-HTTCCC
T ss_pred eEEEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEec-CCHHHHHHHHH-HcCCCC
Confidence 3578895 9999999999999999999999999999999999986 89999999999 899964
No 10
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A
Probab=99.25 E-value=6e-11 Score=74.98 Aligned_cols=67 Identities=31% Similarity=0.433 Sum_probs=58.3
Q ss_pred CceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEeccCCCHHHHHHHHHhccCCcEEEc
Q 032393 28 TPEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSGRKVELI 95 (142)
Q Consensus 28 ~~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~~vd~~~I~~~I~kk~G~~aeli 95 (142)
+.++.|.|. |+|.+|+..|+++|.+++||.++.+|+.+++++|.++......|...|. .+||.+...
T Consensus 2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~i~~~i~-~~Gy~~~~~ 69 (73)
T 1mwy_A 2 GTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQ-KAGYSLRDE 69 (73)
T ss_dssp CEEEEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHH-HHTCEEEEC
T ss_pred CeEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCHHHHHHHHH-HcCCccccc
Confidence 567789996 9999999999999999999999999999999999876224678889998 899987643
No 11
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A
Probab=99.24 E-value=5.5e-11 Score=74.16 Aligned_cols=66 Identities=21% Similarity=0.378 Sum_probs=58.4
Q ss_pred ceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcEEEc
Q 032393 29 PEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKVELI 95 (142)
Q Consensus 29 ~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~aeli 95 (142)
+.+.|.|. |+|.+|+..|+++|..++||.++.+|+.+++++|.++ .++...|...|. .+||.+.+.
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~ 71 (72)
T 1aw0_A 3 QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIE-DMGFDATLS 71 (72)
T ss_dssp EEEEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHTCEEEEC
T ss_pred eEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCcCCHHHHHHHHH-HCCCCcEeC
Confidence 45689995 9999999999999999999999999999999999764 257889999999 899987654
No 12
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A
Probab=99.24 E-value=3.5e-11 Score=75.04 Aligned_cols=66 Identities=23% Similarity=0.372 Sum_probs=58.2
Q ss_pred ceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcEEEc
Q 032393 29 PEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKVELI 95 (142)
Q Consensus 29 ~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~aeli 95 (142)
..+.|.|. |+|.+|+.+|+++|..++||.++.+|+.++.++|.++ .++...|...|. .+||.+.+.
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~ 71 (72)
T 1osd_A 3 QTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATA-DAGYPSSVK 71 (72)
T ss_dssp EEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHH-HTTCCCEEC
T ss_pred eEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-hcCCCeEec
Confidence 45789995 9999999999999999999999999999999999753 368889999999 899987653
No 13
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}
Probab=99.24 E-value=5e-11 Score=74.32 Aligned_cols=64 Identities=19% Similarity=0.416 Sum_probs=57.0
Q ss_pred CceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcE
Q 032393 28 TPEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKV 92 (142)
Q Consensus 28 ~~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~a 92 (142)
+.++.|.|. |+|.+|+..|+++|.+++||.++.+|+.+++++|.++ .++...|...|. .+||.+
T Consensus 4 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~ 70 (71)
T 2l3m_A 4 MEQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIE-DQGYDV 70 (71)
T ss_dssp EEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTSCHHHHHHHHH-HTTCEE
T ss_pred cEEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCCC
Confidence 456789996 9999999999999999999999999999999999743 368889999999 899975
No 14
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A
Probab=99.22 E-value=6.2e-11 Score=79.33 Aligned_cols=69 Identities=17% Similarity=0.366 Sum_probs=60.3
Q ss_pred eEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhcc---CCcEEEcCCCC
Q 032393 30 EIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKS---GRKVELISPLP 99 (142)
Q Consensus 30 ~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~---G~~aelis~~p 99 (142)
++.|.|. |+|.+|+.+|+++|..++||.++.+|+.+++++|.++ .+++..|..+|. .+ ||.+.++++..
T Consensus 4 ~~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~~~i~~~i~-~~g~Ggy~~~~~~~~~ 78 (90)
T 2g9o_A 4 TATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIE-AVSPGLYRVSITSEVE 78 (90)
T ss_dssp EEEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCTHHHHHHHH-TTSTTTCEEECCCCC-
T ss_pred EEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHH-hccCCCeEEEEeCCCc
Confidence 4679996 9999999999999999999999999999999999753 367889999999 89 59998887653
No 15
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=99.22 E-value=6.6e-11 Score=72.82 Aligned_cols=63 Identities=25% Similarity=0.538 Sum_probs=56.6
Q ss_pred EEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcEEEc
Q 032393 32 VLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKVELI 95 (142)
Q Consensus 32 ~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~aeli 95 (142)
.|.|. |+|.+|+..|+++|.+++||.++.+|+.+++++|.++ .++...|...|. .+||.+.++
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~ 68 (68)
T 1cpz_A 3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAIN-ELGYQAEVI 68 (68)
T ss_dssp EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-TTSSCEEEC
T ss_pred EEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCCcccC
Confidence 58895 9999999999999999999999999999999999754 368889999999 899988764
No 16
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A
Probab=99.21 E-value=9.9e-11 Score=73.99 Aligned_cols=66 Identities=15% Similarity=0.365 Sum_probs=58.5
Q ss_pred eEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcEEEcC
Q 032393 30 EIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKVELIS 96 (142)
Q Consensus 30 ~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~aelis 96 (142)
.+.|.|. |+|.+|+..|+++|..++||.++.+|+.+++++|.++ .++...|...|. .+||.+.+..
T Consensus 3 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~ 71 (75)
T 3cjk_B 3 SVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAID-DMGFDAVIHN 71 (75)
T ss_dssp EEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HTTCCEEEEE
T ss_pred EEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCceEeec
Confidence 4678995 9999999999999999999999999999999999754 357889999999 8999887653
No 17
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B
Probab=99.19 E-value=8.1e-11 Score=73.35 Aligned_cols=66 Identities=21% Similarity=0.421 Sum_probs=58.9
Q ss_pred eEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc-CCCHHHHHHHHHhccCCcEEEcC
Q 032393 30 EIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK-TADPIKVCERLQKKSGRKVELIS 96 (142)
Q Consensus 30 ~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~-~vd~~~I~~~I~kk~G~~aelis 96 (142)
++.|.|. |+|.+|+..|+++|.+++||.++.+|+.++.++|.++ .++...|...|. .+||.+.++.
T Consensus 3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~-~~G~~~~~~~ 70 (72)
T 1fvq_A 3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIE-DCGFDCEILR 70 (72)
T ss_dssp EEEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEECTTSCHHHHHHHHH-HHTCCEEEEE
T ss_pred EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHH-HCCCceEEcc
Confidence 5679995 9999999999999999999999999999999999753 368889999999 8999988764
No 18
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=99.19 E-value=1.7e-10 Score=70.33 Aligned_cols=63 Identities=22% Similarity=0.459 Sum_probs=55.7
Q ss_pred ceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcE
Q 032393 29 PEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKV 92 (142)
Q Consensus 29 ~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~a 92 (142)
....|.|. |+|.+|+..|+++|..++||.++.+|+.+++++|.++ .++...|...|. .+||.+
T Consensus 2 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~ 67 (69)
T 2qif_A 2 EQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIE-DQGYDV 67 (69)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HTTCEE
T ss_pred eEEEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCCc
Confidence 34679996 9999999999999999999999999999999999753 367889999999 899964
No 19
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A
Probab=99.18 E-value=7.1e-11 Score=73.37 Aligned_cols=63 Identities=24% Similarity=0.351 Sum_probs=56.2
Q ss_pred EEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc-CCCHHHHHHHHHhccCCcEEEc
Q 032393 32 VLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK-TADPIKVCERLQKKSGRKVELI 95 (142)
Q Consensus 32 ~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~-~vd~~~I~~~I~kk~G~~aeli 95 (142)
.|.|. |+|.+|+.+|+++|..++||.++.+|+.+++++|.++ ..+...|...|. .+||.+.+.
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~-~~Gy~~~~~ 67 (69)
T 2kt2_A 3 HLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGTSPDALTAAVA-GLGYKATLA 67 (69)
T ss_dssp CEEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTTSCHHHHHHHHH-TTTSEEECC
T ss_pred EEEECCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCHHHHHHHHH-HCCCceEeC
Confidence 58885 9999999999999999999999999999999999754 357889999999 899987654
No 20
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A
Probab=99.18 E-value=6.3e-11 Score=75.60 Aligned_cols=69 Identities=23% Similarity=0.397 Sum_probs=60.6
Q ss_pred CceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcEEEcCC
Q 032393 28 TPEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKVELISP 97 (142)
Q Consensus 28 ~~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~aelis~ 97 (142)
+.++.|.|. |+|.+|+..|+++|..++||.++.+|+.+++++|.++ .+++..|...|. .+||.+.++..
T Consensus 2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~ 73 (77)
T 1y3j_A 2 SSKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIR-ELGFGATVIEN 73 (77)
T ss_dssp CEEEEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTTTSCHHHHHHHHH-HHTSCEEEESC
T ss_pred CEEEEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCceEECCc
Confidence 456789995 9999999999999999999999999999999999754 367889999999 89999887653
No 21
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A
Probab=99.18 E-value=8.7e-11 Score=76.86 Aligned_cols=70 Identities=13% Similarity=0.258 Sum_probs=61.2
Q ss_pred CceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcEEEcCCC
Q 032393 28 TPEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKVELISPL 98 (142)
Q Consensus 28 ~~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~aelis~~ 98 (142)
...+.|.|. |+|.+|+.+|+++|..++||.++.+|+.+++++|.++ .++...|...|. .+||.+.++...
T Consensus 8 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~~ 80 (84)
T 1q8l_A 8 EVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIE-AMGFPAFVKKQP 80 (84)
T ss_dssp CEEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHH-HTTCCEECSCCT
T ss_pred ceEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCceEecCCc
Confidence 346789995 9999999999999999999999999999999999764 368889999999 899998776643
No 22
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A
Probab=99.17 E-value=1.6e-10 Score=72.32 Aligned_cols=68 Identities=29% Similarity=0.489 Sum_probs=59.6
Q ss_pred CCceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcEEEc
Q 032393 27 ETPEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKVELI 95 (142)
Q Consensus 27 ~~~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~aeli 95 (142)
++..+.|.|. |+|.+|+..|+++|..++||.++.+|+.++.++|.++ .++...|...|. .+||.+.++
T Consensus 4 ~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~ 74 (76)
T 1opz_A 4 EQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIE-KLGYHVVIE 74 (76)
T ss_dssp CCEEEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHH-HHTCEEECC
T ss_pred cceEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HCCCceecC
Confidence 4566789996 9999999999999999999999999999999999753 367889999999 899987654
No 23
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A
Probab=99.16 E-value=1.1e-10 Score=74.71 Aligned_cols=68 Identities=15% Similarity=0.349 Sum_probs=60.1
Q ss_pred CceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcEEEcC
Q 032393 28 TPEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKVELIS 96 (142)
Q Consensus 28 ~~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~aelis 96 (142)
...+.|.|. |+|.+|+.+|+++|..++||.++.+|+.+++++|.++ .++...|...|. .+||.+.+.+
T Consensus 7 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~ 77 (79)
T 1kvi_A 7 VNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAID-DMGFDAVIHN 77 (79)
T ss_dssp CEEEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTTTCCHHHHHHHHH-HHCCCEEECC
T ss_pred cEEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHH-HCCCceEecC
Confidence 456789995 9999999999999999999999999999999999754 357889999999 8999987764
No 24
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}
Probab=99.15 E-value=1.3e-10 Score=71.49 Aligned_cols=65 Identities=25% Similarity=0.462 Sum_probs=57.0
Q ss_pred CceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcEE
Q 032393 28 TPEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKVE 93 (142)
Q Consensus 28 ~~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~ae 93 (142)
+.++.|.|. |+|.+|+..|+++|..++||.++.+|+.+++++|.++ .++...|...|. .+||.+.
T Consensus 2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~ 69 (71)
T 2ldi_A 2 LKTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIA-ALGYTLA 69 (71)
T ss_dssp CEEEEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTTTCCTHHHHHHHH-TTTCEEE
T ss_pred cEEEEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCCcc
Confidence 445789996 9999999999999999999999999999999999754 357788999999 8999764
No 25
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}
Probab=99.15 E-value=6.3e-11 Score=79.20 Aligned_cols=64 Identities=23% Similarity=0.393 Sum_probs=58.0
Q ss_pred CCceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEeccCCCHHHHHHHHHhccCCcE
Q 032393 27 ETPEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSGRKV 92 (142)
Q Consensus 27 ~~~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~~vd~~~I~~~I~kk~G~~a 92 (142)
.+..+.|.|. |+|.+|+..|+++|..++||.++.+|+.+++++|.+. +++..|..+|. .+||.+
T Consensus 20 ~~~~~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~-~~~~~i~~~i~-~~Gy~~ 84 (85)
T 2k2p_A 20 QGAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGV-SDAAHIAEIIT-AAGYTP 84 (85)
T ss_dssp --CEEEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESC-CCHHHHHHHHH-HTTCCC
T ss_pred cccEEEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEec-CCHHHHHHHHH-HcCCCC
Confidence 4567789995 9999999999999999999999999999999999987 89999999999 899964
No 26
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A
Probab=99.14 E-value=2e-10 Score=72.08 Aligned_cols=67 Identities=19% Similarity=0.338 Sum_probs=58.1
Q ss_pred ceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcEEEcC
Q 032393 29 PEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKVELIS 96 (142)
Q Consensus 29 ~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~aelis 96 (142)
..+.|.|. |+|.+|+..|+++|..++||.++.+|+.+++++|.++ .+++..|...|. .+||.+.+..
T Consensus 4 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~~ 73 (75)
T 1yjr_A 4 GVLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIE-SLGFEPSLVK 73 (75)
T ss_dssp CCEEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTTTTHHHHHHHHHH-HHHCEEEESS
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCCceeec
Confidence 34679996 9999999999999999999999999999999999764 246678899998 8999887654
No 27
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=99.14 E-value=1.2e-10 Score=71.19 Aligned_cols=62 Identities=26% Similarity=0.413 Sum_probs=54.7
Q ss_pred eEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc-CCCHHHHHHHHHhccCCcE
Q 032393 30 EIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK-TADPIKVCERLQKKSGRKV 92 (142)
Q Consensus 30 ~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~-~vd~~~I~~~I~kk~G~~a 92 (142)
++.|.|. |+|.+|+..|+++|..++||.++.+|+.+++++|.++ ..+...|...|. .+||.+
T Consensus 2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~-~~G~~~ 65 (66)
T 1yg0_A 2 KATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALL-DAGQEV 65 (66)
T ss_dssp EEEECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTCCHHHHHHHHH-HHTCCC
T ss_pred eEEEEECCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCCCCHHHHHHHHH-HcCCCc
Confidence 4578885 9999999999999999999999999999999999754 247888999998 899864
No 28
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}
Probab=99.12 E-value=9.9e-11 Score=73.09 Aligned_cols=62 Identities=27% Similarity=0.440 Sum_probs=54.7
Q ss_pred eEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEeccCCCHHHHHHHHHhccCCcEEEc
Q 032393 30 EIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSGRKVELI 95 (142)
Q Consensus 30 ~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~~vd~~~I~~~I~kk~G~~aeli 95 (142)
++.|.|. |+|.+|+.+|+++|.++ ||.++.+|+.+++++|.++ .+ ..|...|. .+||.+..+
T Consensus 2 ~~~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~-~~-~~i~~~i~-~~Gy~~~~~ 64 (67)
T 2kyz_A 2 RYVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETE-NL-DSVLKKLE-EIDYPVESY 64 (67)
T ss_dssp EEEEECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECS-CH-HHHHHHHH-TTTCCCCBC
T ss_pred eEEEEECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEEC-CH-HHHHHHHH-HcCCceeeE
Confidence 3578995 99999999999999999 9999999999999999887 45 88999998 899976543
No 29
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A
Probab=99.12 E-value=2.7e-10 Score=72.48 Aligned_cols=68 Identities=25% Similarity=0.428 Sum_probs=59.6
Q ss_pred ceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcEEEcCC
Q 032393 29 PEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKVELISP 97 (142)
Q Consensus 29 ~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~aelis~ 97 (142)
..+.|.|. |+|.+|+..|+++|..++||.++.+|+.++.++|.++ .++...|...|. .+||.+.++..
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~~~ 73 (80)
T 1jww_A 3 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVD-KLGYKLKLKGE 73 (80)
T ss_dssp EEEEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTTTCCHHHHHHHHH-HHTSEEEECCS
T ss_pred eEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCeEEecCc
Confidence 45679996 9999999999999999999999999999999999753 367888999998 89999877653
No 30
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}
Probab=99.11 E-value=4.5e-10 Score=75.28 Aligned_cols=72 Identities=14% Similarity=0.237 Sum_probs=62.9
Q ss_pred CCceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcEEEcCCCC
Q 032393 27 ETPEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKVELISPLP 99 (142)
Q Consensus 27 ~~~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~aelis~~p 99 (142)
.+..+.|.|. |+|.+|+..|+++|..++||.++.+|+..+.++|.++ .++...|...|. .+||.+.++..+.
T Consensus 14 ~~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~~~ 88 (95)
T 2kkh_A 14 KLQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKALN-EARLEANVRVNGE 88 (95)
T ss_dssp CSEEEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHTCCEEESCCCC
T ss_pred ceEEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHH-HcCCceEEecCCC
Confidence 4667889995 9999999999999999999999999999999999754 257889999999 8999988776543
No 31
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=99.09 E-value=3.8e-10 Score=80.05 Aligned_cols=66 Identities=21% Similarity=0.374 Sum_probs=59.3
Q ss_pred ceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcEEEc
Q 032393 29 PEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKVELI 95 (142)
Q Consensus 29 ~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~aeli 95 (142)
..+.|.|. |+|.+|+++|+++|.+++||.++.+|+.+++++|.++ .+++..|..+|. .+||.+.++
T Consensus 80 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~ 148 (149)
T 2ew9_A 80 GNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKIIE-EIGFHASLA 148 (149)
T ss_dssp SEEEEEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSCHHHHHHHHH-HHTCEEECC
T ss_pred ceeEEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCCHHHHHHHHH-hCCCceEec
Confidence 46789995 9999999999999999999999999999999999864 368899999999 899987654
No 32
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=99.08 E-value=3.9e-10 Score=88.61 Aligned_cols=70 Identities=20% Similarity=0.418 Sum_probs=63.9
Q ss_pred ceEEEEEeccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEeccCCCHHHHHHHHHhccCCcEEEcCCCCC
Q 032393 29 PEIVLKVDMHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSGRKVELISPLPK 100 (142)
Q Consensus 29 ~~i~lkV~M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~~vd~~~I~~~I~kk~G~~aelis~~p~ 100 (142)
.++.|.|+|+|.+|+.+|+++|.+++||.++.+|+.+++++|.+. +++..|..+|+ ++||.+.++...+.
T Consensus 6 ~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~-~~~~~I~~aI~-~~Gy~a~~~~~~~~ 75 (222)
T 1qup_A 6 YEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESS-VAPSTIINTLR-NCGKDAIIRGAGKP 75 (222)
T ss_dssp EEEEEECCCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEES-SCHHHHHHHHH-HTTCCCEEECCSCT
T ss_pred eEEEEEEccccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEecc-CCHHHHHHHHH-HcCCccccccCCCc
Confidence 456788889999999999999999999999999999999999987 89999999999 89999988876553
No 33
>2ofg_X Zinc-transporting ATPase; ferredoxin-like fold, beta-alpha-beta-BETA-alpha-beta, struc genomics, hydrolase, membrane protein; NMR {Synechocystis SP} PDB: 2ofh_X
Probab=99.08 E-value=6e-10 Score=77.52 Aligned_cols=68 Identities=19% Similarity=0.363 Sum_probs=60.1
Q ss_pred CCceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcEEEc
Q 032393 27 ETPEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKVELI 95 (142)
Q Consensus 27 ~~~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~aeli 95 (142)
.+.++.|.|. |+|.+|+.+|+++|..++||.++.+|+.+++++|.++ .++...|...|. .+||.+...
T Consensus 6 ~~~~~~l~v~Gm~C~~Ca~~Ie~~L~~~~GV~~v~v~~~~~~~~V~~~~~~~~~~~i~~~i~-~~Gy~~~~~ 76 (111)
T 2ofg_X 6 PLKTQQMQVGGMDCTSCKLKIEGSLERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIA-ALGYTLAEP 76 (111)
T ss_dssp CCEEEEEEESCCCGGGTHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTTCSHHHHHHHHH-TTTCCEECC
T ss_pred cceEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEECCCCEEEEEECCCCCCHHHHHHHHH-HcCCeeeec
Confidence 4667889995 9999999999999999999999999999999999754 357889999999 899987643
No 34
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=99.06 E-value=4.6e-10 Score=80.08 Aligned_cols=69 Identities=25% Similarity=0.414 Sum_probs=61.5
Q ss_pred ceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcEEEcCCC
Q 032393 29 PEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKVELISPL 98 (142)
Q Consensus 29 ~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~aelis~~ 98 (142)
..+.|.|. |+|.+|+++|+++|.+++||.++.+|+.+++++|.++ .+++..|..+|. .+||.+.+++..
T Consensus 74 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~~ 145 (151)
T 1p6t_A 74 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVD-KLGYKLKLKGEQ 145 (151)
T ss_dssp EEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHH-HHTCCEEESCSS
T ss_pred cccEEEecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECCCCCCHHHHHHHHH-HcCCCeEEcCcc
Confidence 45789995 9999999999999999999999999999999999753 368999999999 899999887654
No 35
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=98.97 E-value=1.2e-09 Score=87.26 Aligned_cols=70 Identities=21% Similarity=0.433 Sum_probs=63.5
Q ss_pred CceEEEEEeccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEeccCCCHHHHHHHHHhccCCcEEEcCCCC
Q 032393 28 TPEIVLKVDMHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSGRKVELISPLP 99 (142)
Q Consensus 28 ~~~i~lkV~M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~~vd~~~I~~~I~kk~G~~aelis~~p 99 (142)
..++.|.|.|+|.+|+.+|+++|.+++||.++.+|+.+++++|.+. +++..|..+|. .+||.+.++...+
T Consensus 6 ~~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~-~~~~~I~~aIe-~~Gy~a~~~~~~~ 75 (249)
T 1jk9_B 6 TYEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESS-VAPSTIINTLR-NCGKDAIIRGAGK 75 (249)
T ss_dssp CEEEEEECCCCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEES-SCHHHHHHHHH-TTTCCCEEEEESS
T ss_pred ceeEEEEEeeccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEecC-CCHHHHHHHHH-HhCCCcccccCCc
Confidence 3456788889999999999999999999999999999999999987 89999999999 8999998877544
No 36
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=98.94 E-value=3.2e-09 Score=80.24 Aligned_cols=69 Identities=16% Similarity=0.370 Sum_probs=59.8
Q ss_pred ceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcEEEcCCC
Q 032393 29 PEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKVELISPL 98 (142)
Q Consensus 29 ~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~aelis~~ 98 (142)
.++.|.|. |+|.+|+.+|+++|.+++||.++.+|+..++++|.++ .+++..|...|. .+||.+.++...
T Consensus 122 ~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~~ 193 (202)
T 2rop_A 122 STTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRAAIE-DMGFEASVVSES 193 (202)
T ss_dssp EEEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHTSCEEEC---
T ss_pred eEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHH-HcCCceEEcCCC
Confidence 45789995 9999999999999999999999999999999999753 368899999999 899999887653
No 37
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=98.91 E-value=6.1e-09 Score=73.70 Aligned_cols=68 Identities=21% Similarity=0.415 Sum_probs=60.0
Q ss_pred CceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcEEEcC
Q 032393 28 TPEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKVELIS 96 (142)
Q Consensus 28 ~~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~aelis 96 (142)
+.++.|.|. |+|.+|+..|+++|..++||.++.+|+.+++++|.++ ..++..|...|. .+||.+.++.
T Consensus 3 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~~ 73 (149)
T 2ew9_A 3 PQKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQ-DLGFEAAVME 73 (149)
T ss_dssp CEEEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHTCEEEECS
T ss_pred cEEEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcCCCCCHHHHHHHHh-cCCCceEeec
Confidence 567889995 9999999999999999999999999999999999753 367888999999 8999887654
No 38
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A
Probab=98.86 E-value=4e-09 Score=66.20 Aligned_cols=57 Identities=33% Similarity=0.598 Sum_probs=49.7
Q ss_pred eEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEeccCCCHHHHHHHHHhccCCcE
Q 032393 30 EIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSGRKV 92 (142)
Q Consensus 30 ~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~~vd~~~I~~~I~kk~G~~a 92 (142)
++.|.|. |+|.+|+..|+++|..++||.++.+|+..++++|.++ .+ ...|. .+||.+
T Consensus 4 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~-~~----~~~i~-~~Gy~~ 61 (71)
T 2aj0_A 4 KTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGE-AS----IQQVE-QAGAFE 61 (71)
T ss_dssp EEEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEES-CC----HHHHH-HHHTTT
T ss_pred EEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEec-Cc----HHHHH-HhCCCc
Confidence 5679996 9999999999999999999999999999999999887 44 45667 788753
No 39
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=98.65 E-value=9.6e-08 Score=72.00 Aligned_cols=68 Identities=22% Similarity=0.422 Sum_probs=56.4
Q ss_pred CCceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhcc---CCcEEEc
Q 032393 27 ETPEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKS---GRKVELI 95 (142)
Q Consensus 27 ~~~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~---G~~aeli 95 (142)
.+.++.|.|. |+|.+|+.+|+++|..++||.++.+|+..++++|.++ .+++..|...|. .+ ||.+.+.
T Consensus 18 ~~~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~~~gg~~v~~~ 91 (202)
T 2rop_A 18 HVVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAIE-ALPPGNFKVSLP 91 (202)
T ss_dssp --CEEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHT-TSSSSCSEEEC-
T ss_pred ccEEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HhccCCeEEEec
Confidence 4567889996 9999999999999999999999999999999999754 367888999998 77 3665433
No 40
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=98.55 E-value=3e-07 Score=65.28 Aligned_cols=64 Identities=30% Similarity=0.510 Sum_probs=55.3
Q ss_pred CceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcE
Q 032393 28 TPEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKV 92 (142)
Q Consensus 28 ~~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~a 92 (142)
.....|.|. |+|.+|+..|++.|..++||.++.+++..++++|.++ ..+...|...+. .+||.+
T Consensus 5 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~ 71 (151)
T 1p6t_A 5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIE-KLGYHV 71 (151)
T ss_dssp CEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHH-HHTCEE
T ss_pred ceEEEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcCCcCCHHHHHHHHH-HcCCcc
Confidence 345679996 9999999999999999999999999999999998643 357888999998 899864
No 41
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=98.53 E-value=2.3e-07 Score=83.25 Aligned_cols=64 Identities=19% Similarity=0.378 Sum_probs=58.0
Q ss_pred ceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc--CCCHHHHHHHHHhccCCcEE
Q 032393 29 PEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGK--TADPIKVCERLQKKSGRKVE 93 (142)
Q Consensus 29 ~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~--~vd~~~I~~~I~kk~G~~ae 93 (142)
.++.|.|+ |+|.+|+.+|+++|.+++||.++.+|+.+++++|.++ .++++.|..+|. .+||.+.
T Consensus 2 m~~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~~~~i~~ai~-~~Gy~~~ 68 (723)
T 3j09_A 2 MERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIE-DLGYGVV 68 (723)
T ss_dssp CCEEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHCCEES
T ss_pred eeEEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCCHHHHHHHHH-hcCCccc
Confidence 35789996 9999999999999999999999999999999999754 368999999999 8999874
No 42
>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}
Probab=91.25 E-value=1.1 Score=30.67 Aligned_cols=67 Identities=15% Similarity=0.326 Sum_probs=49.1
Q ss_pred CceEEEEEe--ccchhHHHHHHHHhhCCCCccEEEEec-----CCC--EEEEeccCCCHHHHHHHHHhccCCcEEEcC
Q 032393 28 TPEIVLKVD--MHCEACARKVARALKGFEGVDDITADS-----KAS--KVVVKGKTADPIKVCERLQKKSGRKVELIS 96 (142)
Q Consensus 28 ~~~i~lkV~--M~C~~Ca~kIekaL~~i~GV~~V~vd~-----~~~--kVtV~g~~vd~~~I~~~I~kk~G~~aelis 96 (142)
..+++|.|. +|-+.-. .+-..|..++||..|++.. .+. +++|.|+.++.+.|.++|. .+|-.++-+.
T Consensus 4 irRlVLDVlKP~h~P~iv-d~A~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~~idfd~I~~~IE-~~Gg~IHSID 79 (96)
T 2x3d_A 4 IRRLVLDVLKPIRGTSIV-DLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGTSLNFDDIRKMLE-EEGCAIHSID 79 (96)
T ss_dssp EEEEEEEEEEESSSSCHH-HHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEESSCCHHHHHHHHH-HTTCEEEEEE
T ss_pred eEEEEEEcccCCCCCCHH-HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHH-HcCCeEEeee
Confidence 456777773 5666655 6778899999988877654 444 3455687799999999999 8998776543
No 43
>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1
Probab=88.55 E-value=0.8 Score=31.46 Aligned_cols=67 Identities=16% Similarity=0.295 Sum_probs=47.3
Q ss_pred CceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEec-----CCCEE--EEeccCCCHHHHHHHHHhccCCcEEEcC
Q 032393 28 TPEIVLKVD-MHCEACARKVARALKGFEGVDDITADS-----KASKV--VVKGKTADPIKVCERLQKKSGRKVELIS 96 (142)
Q Consensus 28 ~~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~-----~~~kV--tV~g~~vd~~~I~~~I~kk~G~~aelis 96 (142)
..+++|.|. -|-+.-. .+-..|..++||..|++.. .+..+ +|.|+.++.+.|..+|. .+|-.++-+.
T Consensus 6 irRlVLDVlKPh~p~i~-d~A~~l~~~~gV~gVnItv~EvD~eTe~lkitiEG~~id~d~I~~~IE-~~Gg~IHSID 80 (97)
T 2raq_A 6 LIRIVLDILKPHEPIIP-EYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIE-SYGGSIHSVD 80 (97)
T ss_dssp EEEEEEEEECCSCSCHH-HHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHH-HTTCEEEEEE
T ss_pred ceEEEEEecCCCCCCHH-HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHH-HcCCeEEeee
Confidence 456777774 4544443 5667788889987776544 44444 45687799999999999 8998776543
No 44
>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1
Probab=87.77 E-value=0.83 Score=31.52 Aligned_cols=66 Identities=20% Similarity=0.243 Sum_probs=47.1
Q ss_pred CceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEec-----CCC--EEEEeccCCCHHHHHHHHHhccCCcEEEc
Q 032393 28 TPEIVLKVD-MHCEACARKVARALKGFEGVDDITADS-----KAS--KVVVKGKTADPIKVCERLQKKSGRKVELI 95 (142)
Q Consensus 28 ~~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~-----~~~--kVtV~g~~vd~~~I~~~I~kk~G~~aeli 95 (142)
..+++|.|. -|-+.-. .+-..|..++||..|++.. .+. +++|.|+.+|.+.|.++|. .+|-.++-+
T Consensus 6 iRRlVLDVlKPh~P~iv-dlA~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~dIdfd~I~~~IE-~~GgvIHSI 79 (100)
T 3bpd_A 6 LRRLVLDVLKPHEPKTI-VFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIE-DMGGVIHSV 79 (100)
T ss_dssp EEEEEEEEEEESCSCHH-HHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHH-TTTCEEEEE
T ss_pred ceEEEEEecCCCCCCHH-HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHH-HcCCeEEee
Confidence 456777774 4444443 6778899999988876654 444 3445687799999999999 899776644
No 45
>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A*
Probab=80.07 E-value=1.7 Score=29.24 Aligned_cols=35 Identities=17% Similarity=0.477 Sum_probs=26.9
Q ss_pred eEEEEEeccchhHH------HHHHHHhhCCCCccEEEEecC
Q 032393 30 EIVLKVDMHCEACA------RKVARALKGFEGVDDITADSK 64 (142)
Q Consensus 30 ~i~lkV~M~C~~Ca------~kIekaL~~i~GV~~V~vd~~ 64 (142)
.+.+.+.+++++|. ..|+.+|..++||.+|.+++.
T Consensus 42 ~V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~V~V~l~ 82 (103)
T 3cq1_A 42 RAYVRMTLTTPGCPLHDSLGEAVRQALSRLPGVEEVEVEVT 82 (103)
T ss_dssp EEEEEECCSSSSCCSSCHHHHHHHHHHHTSTTCCEEEEEEC
T ss_pred EEEEEEEECCCCCcHHHHHHHHHHHHHHhCCCceeEEEEEe
Confidence 45566667777774 578999999999999988753
No 46
>3lno_A Putative uncharacterized protein; alpha-beta fold, structural genomics, center for structural genomics of infectious diseases, csgid; 2.10A {Bacillus anthracis} SCOP: d.52.8.0
Probab=80.04 E-value=1.5 Score=29.88 Aligned_cols=36 Identities=19% Similarity=0.363 Sum_probs=26.9
Q ss_pred eEEEEEeccchhH------HHHHHHHh-hCCCCccEEEEecCC
Q 032393 30 EIVLKVDMHCEAC------ARKVARAL-KGFEGVDDITADSKA 65 (142)
Q Consensus 30 ~i~lkV~M~C~~C------a~kIekaL-~~i~GV~~V~vd~~~ 65 (142)
.+.+.+.+++++| ...|+.+| ..++||.+|.|++..
T Consensus 45 ~V~V~ltlt~p~cp~~~~i~~~i~~al~~~l~Gv~~V~V~l~~ 87 (108)
T 3lno_A 45 NAVITMTMTSIGCPMAGQIVSDVKKVLSTNVPEVNEIEVNVVW 87 (108)
T ss_dssp CEEEEECCSCTTCTTHHHHHHHHHHHHHHHCTTCCCEEEEECC
T ss_pred eEEEEEEECCCCCcHHHHHHHHHHHHHHHhCCCCceEEEEEEe
Confidence 4566666666666 55788889 899999988877643
No 47
>1uwd_A Hypothetical protein TM0487; similar to PAAD protein, alpha/beta fold,structural genomics joint center for structural genomics, JCSG; NMR {Thermotoga maritima} SCOP: d.52.8.2 PDB: 1wcj_A
Probab=77.33 E-value=1.6 Score=29.22 Aligned_cols=35 Identities=20% Similarity=0.464 Sum_probs=25.6
Q ss_pred eEEEEEeccchhHH------HHHHHHhhCCCCccEEEEecC
Q 032393 30 EIVLKVDMHCEACA------RKVARALKGFEGVDDITADSK 64 (142)
Q Consensus 30 ~i~lkV~M~C~~Ca------~kIekaL~~i~GV~~V~vd~~ 64 (142)
.+.+.+.+++++|. ..|+.+|..++||.+|.+++.
T Consensus 43 ~V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~v~V~l~ 83 (103)
T 1uwd_A 43 NVKVLMTMTTPMCPLAGMILSDAEEAIKKIEGVNNVEVELT 83 (103)
T ss_dssp EEEEEECCSSSCCSSHHHHHHHHHHHHHTSSSCCEEEEEEC
T ss_pred EEEEEEEECCCCCcHHHHHHHHHHHHHHhCCCcceEEEEEe
Confidence 45566666666654 468889999999999988753
No 48
>4gwb_A Peptide methionine sulfoxide reductase MSRA 3; structural genomics, protein structure initiative, nysgrc, R PSI-biology; 1.20A {Sinorhizobium meliloti}
Probab=76.04 E-value=4.8 Score=30.05 Aligned_cols=46 Identities=9% Similarity=0.110 Sum_probs=36.5
Q ss_pred hhHHHHHHHHhhCCCCccEEEEecCCC---------------EEEEecc--CCCHHHHHHHHH
Q 032393 40 EACARKVARALKGFEGVDDITADSKAS---------------KVVVKGK--TADPIKVCERLQ 85 (142)
Q Consensus 40 ~~Ca~kIekaL~~i~GV~~V~vd~~~~---------------kVtV~g~--~vd~~~I~~~I~ 85 (142)
.||=+-++..+.+++||.++.+-..+| .|.|+.+ .++...|++...
T Consensus 9 gGCFWg~E~~f~~l~GV~~t~~GYagG~~~nPtY~~v~~HaE~V~V~yDp~~isy~~LL~~F~ 71 (168)
T 4gwb_A 9 GGCFWGMQDLIRKLPGVIETRVGYTGGDVPNATYRNHGTHAEGIEIIFDPERISYRRILELFF 71 (168)
T ss_dssp ESCHHHHHHHHTTSTTEEEEEEEEESSSCTTCBTTBCTTCEEEEEEEECTTTCCHHHHHHHHH
T ss_pred ccCccchHHHHhcCCCeEEEEEEcCCCcCCCCcccccCceEEEEEEEECCCCCCHHHHHHHHH
Confidence 366677788899999999999998766 5566654 589999998775
No 49
>1fvg_A Peptide methionine sulfoxide reductase; oxidoreductase; 1.60A {Bos taurus} SCOP: d.58.28.1 PDB: 1fva_A 2l90_A*
Probab=68.40 E-value=7 Score=29.91 Aligned_cols=46 Identities=13% Similarity=0.040 Sum_probs=35.2
Q ss_pred hhHHHHHHHHhhCCCCccEEEEecCCCE-------------------EEEecc--CCCHHHHHHHHH
Q 032393 40 EACARKVARALKGFEGVDDITADSKASK-------------------VVVKGK--TADPIKVCERLQ 85 (142)
Q Consensus 40 ~~Ca~kIekaL~~i~GV~~V~vd~~~~k-------------------VtV~g~--~vd~~~I~~~I~ 85 (142)
.||-+-++..+.+++||.++.+-+.+|. |.|..+ .++...|++...
T Consensus 50 gGCFWg~E~~F~~l~GV~~t~vGYagG~~~nPtY~~Vcsg~TGHaEaV~V~yDp~~isy~~LL~~F~ 116 (199)
T 1fvg_A 50 MGCFWGAERKFWTLKGVYSTQVGFAGGYTPNPTYKEVCSGKTGHAEVVRVVFQPEHISFEELLKVFW 116 (199)
T ss_dssp ESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHH
T ss_pred cCCeeeeHHHHhhCCCeEEEEeeccCCCCCCCChhheecCCCCCeEEEEEEECCCcCCHHHHHHHHH
Confidence 3555666777889999999999886664 566654 578899998876
No 50
>3bqh_A PILB, peptide methionine sulfoxide reductase MSRA/MSRB; methionine sulfoxide reductase A, oxidized form, elect transport; 1.95A {Neisseria meningitidis} PDB: 3bqe_A 3bqf_A* 3bqg_A
Probab=64.44 E-value=8.2 Score=29.38 Aligned_cols=46 Identities=13% Similarity=0.137 Sum_probs=34.8
Q ss_pred hhHHHHHHHHhhCCCCccEEEEecCCCE-------------------EEEecc--CCCHHHHHHHHH
Q 032393 40 EACARKVARALKGFEGVDDITADSKASK-------------------VVVKGK--TADPIKVCERLQ 85 (142)
Q Consensus 40 ~~Ca~kIekaL~~i~GV~~V~vd~~~~k-------------------VtV~g~--~vd~~~I~~~I~ 85 (142)
.||-+-++..+.+++||.++.+-+.+|. |.|+.+ .++...|++...
T Consensus 9 gGCFWg~E~~F~~~~GV~~t~vGYagG~~~nPtY~~Vc~g~tGHaEaV~V~yDp~~isy~~LL~~f~ 75 (193)
T 3bqh_A 9 GGCFWGLEAYFQRIDGVVDAVSGYANGNTKNPSYEDVSYRHTGHAETVKVTYDADKLSLDDILQYFF 75 (193)
T ss_dssp ESCHHHHHHHHHTSTTEEEEEEEEESCSSSSCCHHHHHHSCCCCEEEEEEEEETTTCCHHHHHHHHH
T ss_pred cCCeeehHHHHhcCCCEEEEEEeccCCcCCCCChheeecCCCCCeEEEEEEECCCcCCHHHHHHHHH
Confidence 3566666778889999999999886654 555543 578899998776
No 51
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=64.40 E-value=18 Score=24.08 Aligned_cols=46 Identities=13% Similarity=0.308 Sum_probs=30.9
Q ss_pred hhHHHHHHHHhhCCCCccEEEEecCCCEEEEeccCCCHHHHHHHHH
Q 032393 40 EACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQ 85 (142)
Q Consensus 40 ~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~~vd~~~I~~~I~ 85 (142)
++=...|..+|.+++|+.-..++...|++.|+-..-+...+.+.|.
T Consensus 16 p~~~~~V~~~L~~ipgvEi~~~~~~~GkiVV~iEa~~~~~l~~~i~ 61 (95)
T 2jsx_A 16 SERISDISTQLNAFPGCEVAVSDAPSGQLIVVVEAEDSETLIQTIE 61 (95)
T ss_dssp TTSHHHHHHHHTTSTTEEEEEEETTTTEEEEEEEESSHHHHHHHHH
T ss_pred CCCHHHHHHHHHCCCCeEEEEecCCCCCEEEEEEeCCHHHHHHHHH
Confidence 4567899999999999954455666788877522135555555443
No 52
>1nwa_A Peptide methionine sulfoxide reductase MSRA; oxidoreductase, product complex, structural genomics, PSI, protein structure initiative; 1.50A {Mycobacterium tuberculosis} SCOP: d.58.28.1
Probab=61.09 E-value=11 Score=28.82 Aligned_cols=46 Identities=13% Similarity=0.094 Sum_probs=34.5
Q ss_pred hhHHHHHHHHhhCCCCccEEEEecCCC---------------EEEEecc--CCCHHHHHHHHH
Q 032393 40 EACARKVARALKGFEGVDDITADSKAS---------------KVVVKGK--TADPIKVCERLQ 85 (142)
Q Consensus 40 ~~Ca~kIekaL~~i~GV~~V~vd~~~~---------------kVtV~g~--~vd~~~I~~~I~ 85 (142)
.||-+-++..+.+++||.++.+-+.+| .|.|+.+ .++...|++...
T Consensus 32 gGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtYe~~G~HaEaV~V~yDp~~iSy~~LL~~Ff 94 (203)
T 1nwa_A 32 GGCFWGLQDLIRNQPGVVSTRVGYSGGNIPNATYRNHGTHAEAVEIIFDPTVTDYRTLLEFFF 94 (203)
T ss_dssp ESCHHHHHHHHTTSTTEEEEEEEEESSSCSSCCSSCCTTCEEEEEEEECTTTCCHHHHHHHHH
T ss_pred cCCeeeeHHHHhcCCCeEEEEeeecCCCCCCCChhhcCCceEEEEEEECCCcCCHHHHHHHHH
Confidence 355555677889999999999988665 3455554 578899998876
No 53
>1ff3_A Peptide methionine sulfoxide reductase; alpha beta roll, PMSR, MSRA, oxidoreductase; 1.90A {Escherichia coli} SCOP: d.58.28.1 PDB: 2gt3_A 2iem_A
Probab=60.76 E-value=12 Score=28.90 Aligned_cols=46 Identities=13% Similarity=0.018 Sum_probs=34.8
Q ss_pred hhHHHHHHHHhhCCCCccEEEEecCCC-------------------EEEEecc--CCCHHHHHHHHH
Q 032393 40 EACARKVARALKGFEGVDDITADSKAS-------------------KVVVKGK--TADPIKVCERLQ 85 (142)
Q Consensus 40 ~~Ca~kIekaL~~i~GV~~V~vd~~~~-------------------kVtV~g~--~vd~~~I~~~I~ 85 (142)
.||-+-++..+.+++||.++.+-+.+| .|.|..+ .++...|++...
T Consensus 49 gGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtY~~VcsG~TGHaEaV~V~yDp~~isy~~LL~~F~ 115 (211)
T 1ff3_A 49 MGXFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVFW 115 (211)
T ss_dssp CSSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHH
T ss_pred cCCeEEehhhHhcCCCeEEEEeeecCCCCCCCChhhccCCCCCceEEEEEEECCCcCCHHHHHHHHH
Confidence 355566677788999999999988654 2556654 578899998886
No 54
>2j89_A Methionine sulfoxide reductase A; MSRA, poplar, oxidoreductase; 1.7A {Populus trichocarpa}
Probab=60.36 E-value=12 Score=29.89 Aligned_cols=46 Identities=17% Similarity=0.132 Sum_probs=35.0
Q ss_pred hhHHHHHHHHhhCCCCccEEEEecCCCE-------------------EEEecc--CCCHHHHHHHHH
Q 032393 40 EACARKVARALKGFEGVDDITADSKASK-------------------VVVKGK--TADPIKVCERLQ 85 (142)
Q Consensus 40 ~~Ca~kIekaL~~i~GV~~V~vd~~~~k-------------------VtV~g~--~vd~~~I~~~I~ 85 (142)
.||-+-++..+.+++||.++.+-+.+|. |.|..+ .++...|++...
T Consensus 101 gGCFWgvE~~F~~l~GV~~t~vGYaGG~t~nPTYeeVcsG~TGHaEaV~V~YDP~~ISy~~LL~~Fw 167 (261)
T 2j89_A 101 AGCFWGVELAFQRVPGVTKTEVGYTQGLLHNPTYEDVCTGTTNHNEVVRVQYDPKECSFDTLIDVLW 167 (261)
T ss_dssp ESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHTTCSCCEEEEEEEECTTTSCHHHHHHHHH
T ss_pred cCCeeeeHHHHhhCCCeEEEEeeecCCCCCCCChhhcccCCCCCeEEEEEEECCCcCCHHHHHHHHH
Confidence 3555666777889999999999886664 666654 578888988776
No 55
>3e0m_A Peptide methionine sulfoxide reductase MSRA/MSRB 1; fusion, msrab, linker, hinge, cell membrane, membrane, multifunctional enzyme, oxidoreductase; 2.40A {Streptococcus pneumoniae}
Probab=51.94 E-value=18 Score=29.46 Aligned_cols=46 Identities=11% Similarity=0.065 Sum_probs=36.3
Q ss_pred hhHHHHHHHHhhCCCCccEEEEecCCCE-----------------EEEecc--CCCHHHHHHHHH
Q 032393 40 EACARKVARALKGFEGVDDITADSKASK-----------------VVVKGK--TADPIKVCERLQ 85 (142)
Q Consensus 40 ~~Ca~kIekaL~~i~GV~~V~vd~~~~k-----------------VtV~g~--~vd~~~I~~~I~ 85 (142)
.||-+-++..+.+++||.++.+-..+|. |.|+.+ .++...|++...
T Consensus 9 gGCFWg~E~~F~~l~GV~~t~~GYagG~~~nPtY~~Vc~TGHaEaV~V~yDp~~isy~~LL~~f~ 73 (313)
T 3e0m_A 9 GGCFWGLEEYFSRISGVLETSVGYANGQVETTNYQLLKETDHAETVQVIYDEKEVSLREILLYYF 73 (313)
T ss_dssp CSCHHHHHHHHTTSTTEEEEEEEEESCSSSCCCTTTHHHHTCEEEEEEEECTTTSCHHHHHHHHH
T ss_pred cCCchhhHHHHhhCCCeEEeecccCCCCCCCCChhhhccCCCeEEEEEEECCCcCCHHHHHHHHH
Confidence 4666777888999999999999987664 566654 589999988776
No 56
>3v4k_A DNA DC->DU-editing enzyme apobec-3G; antiviral defense, HOST-virus interaction, hydrola metal-binding, nucleus; HET: DNA; 1.38A {Homo sapiens} PDB: 3v4j_A* 3ir2_A* 2kem_A* 2jyw_A* 2kbo_A* 3e1u_A* 3iqs_A*
Probab=50.82 E-value=38 Score=25.88 Aligned_cols=63 Identities=14% Similarity=0.261 Sum_probs=41.0
Q ss_pred ceEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEeccCCCHHHHHHHHHhccCCcEEEcCC
Q 032393 29 PEIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSGRKVELISP 97 (142)
Q Consensus 29 ~~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~~vd~~~I~~~I~kk~G~~aelis~ 97 (142)
..++.-|+ --|..|+.+|-.-|...++|. .. +-..++--. . -+-.+=+..|. .+|-++.+.+.
T Consensus 100 Y~vTwy~SWSPC~~CA~~v~~FL~~~~~v~-L~--If~aRLY~~-~-~~~~~gLr~L~-~aG~~v~iM~~ 163 (203)
T 3v4k_A 100 YRVTCFTSWSPCFSCAQEMAKFISKNKHVS-LC--IKTARIYDD-Q-GRCQEGLRTLA-EAGAKISIMTY 163 (203)
T ss_pred EEEEEEEeCCChHHHHHHHHHHHhhCCCeE-EE--EEEEeeccc-C-chHHHHHHHHH-HCCCeEEecCH
Confidence 44555666 669999999999999998873 32 222222222 2 23445566666 68988887774
No 57
>2cpq_A FragIle X mental retardation syndrome related protein 1, isoform B'; KH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.51.1.1
Probab=47.59 E-value=57 Score=21.58 Aligned_cols=60 Identities=13% Similarity=0.075 Sum_probs=39.1
Q ss_pred ccCCCceEEEEEe---ccch-hHHHHHHHHhhCCCCccEEEEecCCCEEEEeccCCCHHHHHHHHH
Q 032393 24 KEEETPEIVLKVD---MHCE-ACARKVARALKGFEGVDDITADSKASKVVVKGKTADPIKVCERLQ 85 (142)
Q Consensus 24 ~~~~~~~i~lkV~---M~C~-~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~~vd~~~I~~~I~ 85 (142)
+-......+|.|+ +.+- |=..+.-+.|....|+.+++++-.+++|+|.|. +.+.+..++.
T Consensus 10 ~~~~~~i~~i~I~~dkIg~vIG~gGk~Ik~I~e~tGv~~IdI~eddG~V~I~g~--~~ea~~~A~~ 73 (91)
T 2cpq_A 10 QLAAAFHEEFVVREDLMGLAIGTHGSNIQQARKVPGVTAIELDEDTGTFRIYGE--SADAVKKARG 73 (91)
T ss_dssp SSSCSEEEEEECCHHHHHHHHTTTTHHHHHHHTSTTEEEEEEETTTTEEEEEES--SHHHHHHHHH
T ss_pred hccCceEEEEEEChHHhhhhcCCCcHHHHHHHHHhCCeEEEEEcCCCEEEEEEC--CHHHHHHHHH
Confidence 3344555677774 3331 223455666777789976888877799999985 6666655555
No 58
>2nyt_A Probable C->U-editing enzyme apobec-2; cytidine deaminase, zinc-ION binding, hydrolase; 2.50A {Homo sapiens} PDB: 2rpz_A
Probab=46.97 E-value=20 Score=26.88 Aligned_cols=61 Identities=15% Similarity=0.325 Sum_probs=41.0
Q ss_pred eEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEec-cCCCHHHHHHHHHhccCCcEEEcC
Q 032393 30 EIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKG-KTADPIKVCERLQKKSGRKVELIS 96 (142)
Q Consensus 30 ~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g-~~vd~~~I~~~I~kk~G~~aelis 96 (142)
.+++-|. -.|..|+..|-.+|+..+||..|.+-.. ..+ +.-+...-+..|+ .+|-.+..+.
T Consensus 84 g~TlYvTlePC~~Ca~aIi~al~~~~gI~rVV~~~~-----d~~~~~p~~~~g~~~L~-~aGI~V~~~~ 146 (190)
T 2nyt_A 84 NVTWYVSSSPCAACADRIIKTLSKTKNLRLLILVGR-----LFMWEEPEIQAALKKLK-EAGCKLRIMK 146 (190)
T ss_pred CeEEEEEcChHHHHHHHHHHhhhhcCCccEEEEEee-----cCCcCChHHHHHHHHHH-HCCCEEEEec
Confidence 5677777 6699999999999999999976654211 011 0011235567777 8998877654
No 59
>3ady_A DOTD; 3-layer(BAB) sandwich, MTH1598-like, proton transport; 2.00A {Legionella pneumophila}
Probab=40.12 E-value=31 Score=25.13 Aligned_cols=37 Identities=11% Similarity=0.143 Sum_probs=30.5
Q ss_pred CCCEEEEeccCCCHHHHHHHHHhccCCcEEEcCCCCCC
Q 032393 64 KASKVVVKGKTADPIKVCERLQKKSGRKVELISPLPKP 101 (142)
Q Consensus 64 ~~~kVtV~g~~vd~~~I~~~I~kk~G~~aelis~~p~~ 101 (142)
.+.++++.+. -+.+.++..|.+..||+..+.+..|+-
T Consensus 64 ~~~~vs~dW~-Gp~eelL~~LA~~~Gy~f~v~G~rpal 100 (148)
T 3ady_A 64 LQARASVDWS-GPIEELTARIAKAAHFRFRVLGKSPSV 100 (148)
T ss_dssp GGCEEEEEEE-EEHHHHHHHHHHHTTCEEEEESCCCSS
T ss_pred cccEEEEEee-CCHHHHHHHHHHHcCceEEeccCCCCC
Confidence 4577888877 689999999998999999988876644
No 60
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=39.53 E-value=59 Score=22.67 Aligned_cols=29 Identities=14% Similarity=0.387 Sum_probs=19.3
Q ss_pred CCceEEEEEeccchhHHHHHHHHhhCCCCc
Q 032393 27 ETPEIVLKVDMHCEACARKVARALKGFEGV 56 (142)
Q Consensus 27 ~~~~i~lkV~M~C~~Ca~kIekaL~~i~GV 56 (142)
+..+++.-.+..|+.|. ++...|..+..|
T Consensus 14 a~~~vv~f~D~~Cp~C~-~~~~~l~~l~~v 42 (147)
T 3gv1_A 14 GKLKVAVFSDPDCPFCK-RLEHEFEKMTDV 42 (147)
T ss_dssp CCEEEEEEECTTCHHHH-HHHHHHTTCCSE
T ss_pred CCEEEEEEECCCChhHH-HHHHHHhhcCce
Confidence 34444444579999999 556678777444
No 61
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=36.93 E-value=78 Score=19.90 Aligned_cols=55 Identities=7% Similarity=0.088 Sum_probs=38.3
Q ss_pred EEEEE-eccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc-CCCHHHHHHHHHhccCCcEEEc
Q 032393 31 IVLKV-DMHCEACARKVARALKGFEGVDDITADSKASKVVVKGK-TADPIKVCERLQKKSGRKVELI 95 (142)
Q Consensus 31 i~lkV-~M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~-~vd~~~I~~~I~kk~G~~aeli 95 (142)
.++.+ ++.|+.-.-++.++|..++.- +.+.|..+ ......|...++ ..||.+...
T Consensus 11 ~~lD~rGl~CP~Pvl~~kkal~~l~~G---------~~l~V~~dd~~a~~di~~~~~-~~G~~~~~~ 67 (82)
T 3lvj_C 11 HTLDALGLRCPEPVMMVRKTVRNMQPG---------ETLLIIADDPATTRDIPGFCT-FMEHELVAK 67 (82)
T ss_dssp EEEECTTCCTTHHHHHHHHHHHTSCTT---------CEEEEEECCTTHHHHHHHHHH-HTTCEEEEE
T ss_pred EEEECCCCCCCHHHHHHHHHHHhCCCC---------CEEEEEECCccHHHHHHHHHH-HCCCEEEEE
Confidence 45666 499999999999999987422 22333322 245667888888 899987654
No 62
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=36.18 E-value=92 Score=20.51 Aligned_cols=56 Identities=21% Similarity=0.185 Sum_probs=39.6
Q ss_pred EEEEE-eccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc-CCCHHHHHHHHHhccCCcEEEcC
Q 032393 31 IVLKV-DMHCEACARKVARALKGFEGVDDITADSKASKVVVKGK-TADPIKVCERLQKKSGRKVELIS 96 (142)
Q Consensus 31 i~lkV-~M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~-~vd~~~I~~~I~kk~G~~aelis 96 (142)
.+|.+ ++.|+.-.-++.++|..++.- +.+.|..+ ......|...++ ..||.+....
T Consensus 27 ~~LD~rGl~CP~Pvl~tkkaL~~l~~G---------e~L~Vl~dd~~a~~dI~~~~~-~~G~~v~~~e 84 (98)
T 1jdq_A 27 KTLDVRGEVCPVPDVETKRALQNMKPG---------EILEVWIDYPMSKERIPETVK-KLGHEVLEIE 84 (98)
T ss_dssp EEEECSSCCSSHHHHHHHHHHHTCCTT---------CEEEEEESSCTHHHHHHHHHH-HSSCCEEEEE
T ss_pred EEEeCCCCCCCHHHHHHHHHHHhCCCC---------CEEEEEECCccHHHHHHHHHH-HCCCEEEEEE
Confidence 45677 499999999999999987432 23344322 245678888888 8999876543
No 63
>3hz7_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Desulfitobacterium hafniense}
Probab=33.20 E-value=50 Score=21.30 Aligned_cols=52 Identities=15% Similarity=0.196 Sum_probs=37.0
Q ss_pred EEE-eccchhHHHHHHHHhhCCC--CccEEEEecCCCEEEEecc-CCCHHHHHHHHHhccCCcEEEc
Q 032393 33 LKV-DMHCEACARKVARALKGFE--GVDDITADSKASKVVVKGK-TADPIKVCERLQKKSGRKVELI 95 (142)
Q Consensus 33 lkV-~M~C~~Ca~kIekaL~~i~--GV~~V~vd~~~~kVtV~g~-~vd~~~I~~~I~kk~G~~aeli 95 (142)
|.+ ++.|+.-.-++.++|..++ | +.+.|..+ ..+...|...++ ..||.+...
T Consensus 4 lD~rGl~CP~Pvl~~kkal~~l~~~G----------~~L~V~~dd~~a~~dI~~~~~-~~G~~v~~~ 59 (87)
T 3hz7_A 4 IDALGQVCPIPVIRAKKALAELGEAG----------GVVTVLVDNDISRQNLQKMAE-GMGYQSEYL 59 (87)
T ss_dssp EECTTCCTTHHHHHHHHHHHTTGGGC----------CEEEEEESSHHHHHHHHHHHH-HHTCEEEEE
T ss_pred EEcCCCCCCHHHHHHHHHHHhccCCC----------CEEEEEECCccHHHHHHHHHH-HCCCEEEEE
Confidence 555 4899999999999999983 4 23344332 245567888888 899987554
No 64
>3pim_A Peptide methionine sulfoxide reductase; methionine-S-sulfoxide reductase, oxidoreductase; 1.90A {Saccharomyces cerevisiae} PDB: 3pil_A 3pin_B
Probab=31.85 E-value=21 Score=26.93 Aligned_cols=47 Identities=6% Similarity=0.051 Sum_probs=31.9
Q ss_pred eccchhHHHHHHHHhhCC--CCccEEEEecCCC--E-----------------------EEEecc--CCCHHHHHHHHH
Q 032393 36 DMHCEACARKVARALKGF--EGVDDITADSKAS--K-----------------------VVVKGK--TADPIKVCERLQ 85 (142)
Q Consensus 36 ~M~C~~Ca~kIekaL~~i--~GV~~V~vd~~~~--k-----------------------VtV~g~--~vd~~~I~~~I~ 85 (142)
.+-|-=|. +..+.++ +||.++.+-+.+| . |.|+.+ .++...|++...
T Consensus 25 agGCFWg~---E~~F~~l~g~GV~~t~~GYagG~~~~~n~~~~PtY~~Vc~g~TGHaEaV~V~yDp~~isy~~LL~~Ff 100 (187)
T 3pim_A 25 ACGCFWGT---EHMYRKYLNDRIVDCKVGYANGEESKKDSPSSVSYKRVCGGDTDFAEVLQVSYNPKVITLRELTDFFF 100 (187)
T ss_dssp ESSCHHHH---HHHHHHHHGGGSSEEEEEEEEECCC---------CSCBTTBCTTCEEEEEEEECTTTSCHHHHHHHHT
T ss_pred ecCCchhh---HHHHHHhcCCCeEEEEeeecCCcccCCCCCCCCchhhhccCCCCCeEEEEEEECCccCCHHHHHHHHH
Confidence 45555555 5555556 7999999888666 2 445543 578889998886
No 65
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=26.86 E-value=72 Score=19.87 Aligned_cols=33 Identities=15% Similarity=0.099 Sum_probs=21.9
Q ss_pred eEEEEEeccchhHH-----HHHHHHhhCCCCccEEEEec
Q 032393 30 EIVLKVDMHCEACA-----RKVARALKGFEGVDDITADS 63 (142)
Q Consensus 30 ~i~lkV~M~C~~Ca-----~kIekaL~~i~GV~~V~vd~ 63 (142)
.+++-..-.|+.|. .++.+.|... ||.-..+|+
T Consensus 3 ~v~ly~~~~C~~c~~~~~~~~ak~~L~~~-~i~~~~~di 40 (93)
T 1t1v_A 3 GLRVYSTSVTGSREIKSQQSEVTRILDGK-RIQYQLVDI 40 (93)
T ss_dssp CEEEEECSSCSCHHHHHHHHHHHHHHHHT-TCCCEEEET
T ss_pred CEEEEEcCCCCCchhhHHHHHHHHHHHHC-CCceEEEEC
Confidence 34444457899996 6788888764 775555554
No 66
>3vow_A Probable DNA DC->DU-editing enzyme apobec-3C; antiviral deffense, HOST-virus interaction, metal- HIV-1 VIF, BET, single domain, sivagm, hydrolase; 2.15A {Homo sapiens} PDB: 3vm8_A
Probab=26.38 E-value=35 Score=25.80 Aligned_cols=62 Identities=19% Similarity=0.216 Sum_probs=38.9
Q ss_pred eEEEEEe-ccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEec-cCCCHHHHHHHHHhccCCcEEEcCC
Q 032393 30 EIVLKVD-MHCEACARKVARALKGFEGVDDITADSKASKVVVKG-KTADPIKVCERLQKKSGRKVELISP 97 (142)
Q Consensus 30 ~i~lkV~-M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g-~~vd~~~I~~~I~kk~G~~aelis~ 97 (142)
.|+.-|+ -.|..|+..|-.-|...++|. ..|- . ..+.. ..-+-..=+..|. .+|-++.+.+.
T Consensus 87 ~VTwy~SwSPC~~CA~~va~FL~~~~~v~-L~If--~--aRLY~~~~~~~q~gLr~L~-~~G~~v~iM~~ 150 (190)
T 3vow_A 87 QVTWYTSWSPCPDCAGEVAEFLARHSNVN-LTIF--T--ARLYYFQYPCYQEGLRSLS-QEGVAVEIMDY 150 (190)
T ss_dssp EEEEEEEECCCHHHHHHHHHHHHHCTTEE-EEEE--E--EECTTTTSHHHHHHHHHHH-HHTCEEEECCH
T ss_pred EEEEEEeCCchHHHHHHHHHHHHhCCCeE-EEEE--E--EecccccCchHHHHHHHHH-HCCCcEEEeCh
Confidence 4566666 669999999999999988873 2221 1 11111 1012234456676 78988888774
No 67
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=26.05 E-value=41 Score=24.23 Aligned_cols=26 Identities=8% Similarity=0.115 Sum_probs=17.8
Q ss_pred CCceEEEEEeccchhHHHH---HHHHhhC
Q 032393 27 ETPEIVLKVDMHCEACARK---VARALKG 52 (142)
Q Consensus 27 ~~~~i~lkV~M~C~~Ca~k---IekaL~~ 52 (142)
++.+++.-.+..|+.|+.- +...|..
T Consensus 14 a~vtiv~f~D~~Cp~C~~~~~~~~~~l~~ 42 (182)
T 3gn3_A 14 GPRLFEVFLEPTCPFSVKAFFKLDDLLAQ 42 (182)
T ss_dssp CSEEEEEEECTTCHHHHHHHTTHHHHHHH
T ss_pred CCEEEEEEECCCCHhHHHHHHHHHHHHHH
Confidence 4566666668999999974 4444544
No 68
>2hiy_A Hypothetical protein; COG3797, structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GOL; 1.40A {Streptococcus pneumoniae} SCOP: d.356.1.1
Probab=25.96 E-value=84 Score=23.07 Aligned_cols=47 Identities=4% Similarity=0.092 Sum_probs=34.1
Q ss_pred HHHHHhhCCCCccEEEEecCCCEEEEeccCCCHHHH----HHHHHhccCCcEE
Q 032393 45 KVARALKGFEGVDDITADSKASKVVVKGKTADPIKV----CERLQKKSGRKVE 93 (142)
Q Consensus 45 kIekaL~~i~GV~~V~vd~~~~kVtV~g~~vd~~~I----~~~I~kk~G~~ae 93 (142)
.+...|..+ |..+|..-+.+|-|.+..+ .+.+.| .+.|.+.+|+.+.
T Consensus 26 dLr~~l~~l-Gf~~V~TyI~SGNvvF~s~-~~~~~l~~~ie~~l~~~fg~~v~ 76 (183)
T 2hiy_A 26 ELRQELTNL-GLEKVESYINSGNIFFTSI-DSKAQLVEKLETFFAVHYPFIQS 76 (183)
T ss_dssp HHHHHHHHH-TCEEEEEETTTTEEEEEEC-SCHHHHHHHHHHHHHHHCTTCCC
T ss_pred HHHHHHHHc-CCccceEEEecCCEEEecC-CCHHHHHHHHHHHHHHhcCCCCC
Confidence 455556665 8899999999999999876 465554 4555567898753
No 69
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=24.75 E-value=1.2e+02 Score=18.18 Aligned_cols=32 Identities=13% Similarity=0.100 Sum_probs=22.2
Q ss_pred eEEEEEeccchhHHHHHHHHhhCCCCccEEEE
Q 032393 30 EIVLKVDMHCEACARKVARALKGFEGVDDITA 61 (142)
Q Consensus 30 ~i~lkV~M~C~~Ca~kIekaL~~i~GV~~V~v 61 (142)
.+.|.+......-...+...|++++||.+|..
T Consensus 46 ~~~i~v~~~~~~~l~~l~~~L~~~~~V~~v~~ 77 (88)
T 2ko1_A 46 TCNLMIFVKNTDKLTTLMDKLRKVQGVFTVER 77 (88)
T ss_dssp EEEEEEEESSHHHHHHHHHHHTTCTTEEEEEE
T ss_pred EEEEEEEECCHHHHHHHHHHHhcCCCceEEEE
Confidence 34455555555566788889999999987644
No 70
>3pro_C Alpha-lytic protease; Pro region, foldase, protein folding, serine protease, hydro hydrolase inhibitor complex; HET: AES; 1.80A {Lysobacter enzymogenes} SCOP: d.52.1.1 d.52.1.1 PDB: 2pro_A* 4pro_C
Probab=22.35 E-value=92 Score=22.81 Aligned_cols=36 Identities=25% Similarity=0.308 Sum_probs=24.5
Q ss_pred CCCccEEEEecCCCEEEEeccCCCHHHHHHHHHhccC
Q 032393 53 FEGVDDITADSKASKVVVKGKTADPIKVCERLQKKSG 89 (142)
Q Consensus 53 i~GV~~V~vd~~~~kVtV~g~~vd~~~I~~~I~kk~G 89 (142)
-.||.++.||..+++|.|+.+.-........+. .+|
T Consensus 113 ~~~v~~W~VD~~tN~VVV~a~~~~~~aa~~f~~-~AG 148 (166)
T 3pro_C 113 LDGVQSWYVDPRSNAVVVKVDDGATDAGVDFVA-LSG 148 (166)
T ss_dssp CTTEEEEEEEGGGTEEEEEEETTCHHHHHHHHH-HHT
T ss_pred CCCCceEEEeCCCCeEEEEeCCCChHHHHHHHH-HhC
Confidence 356889999999999999754234444434444 566
No 71
>1je3_A EC005, hypothetical 8.6 kDa protein in AMYA-FLIE intergenic region; mixed alpha-beta structure, structural genomics; NMR {Escherichia coli} SCOP: d.68.3.3
Probab=21.08 E-value=1.1e+02 Score=20.05 Aligned_cols=55 Identities=15% Similarity=0.047 Sum_probs=36.9
Q ss_pred EEEEE-eccchhHHHHHHHHhhCCCCccEEEEecCCCEEEEecc-CCCHHHHHHHHHhccCCcEEEc
Q 032393 31 IVLKV-DMHCEACARKVARALKGFEGVDDITADSKASKVVVKGK-TADPIKVCERLQKKSGRKVELI 95 (142)
Q Consensus 31 i~lkV-~M~C~~Ca~kIekaL~~i~GV~~V~vd~~~~kVtV~g~-~vd~~~I~~~I~kk~G~~aeli 95 (142)
.+|.+ ++.|+.-.-++.++|..++.- +.+.|..+ ......|...++ ..||.+...
T Consensus 28 ~~LD~rGl~CP~PvlktkkaL~~l~~G---------e~L~Vl~dd~~a~~dIp~~~~-~~G~~v~~~ 84 (97)
T 1je3_A 28 YRLDMVGEPCPYPAVATLEAMPQLKKG---------EILEVVSDCPQSINNIPLDAR-NHGYTVLDI 84 (97)
T ss_dssp EEECSBCCSSSSSTHHHHHHTTTCCSS---------CEEEEEEBCSSSSCHHHHHHH-HHTCSEEEE
T ss_pred eEEeCCCCCCCHHHHHHHHHHHcCCCC---------CEEEEEECCcchHHHHHHHHH-HCCCEEEEE
Confidence 34555 489999999999999987432 22333221 245567888888 899987654
No 72
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=20.14 E-value=65 Score=23.67 Aligned_cols=20 Identities=20% Similarity=0.365 Sum_probs=14.8
Q ss_pred CCCceEEEEEeccchhHHHH
Q 032393 26 EETPEIVLKVDMHCEACARK 45 (142)
Q Consensus 26 ~~~~~i~lkV~M~C~~Ca~k 45 (142)
+++.+++.-.+..|+.|..-
T Consensus 14 ~a~vtivef~D~~Cp~C~~~ 33 (205)
T 3gmf_A 14 AAKLRLVEFVSYTCPHCSHF 33 (205)
T ss_dssp TCSEEEEEEECTTCHHHHHH
T ss_pred CCCeEEEEEECCCCHHHHHH
Confidence 35566666668999999964
Done!