Citrus Sinensis ID: 032394

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-
Protein Sequence
MGNTIGGRRKAKVMKIDGETIKLKTPIQASEVVKDYPGYVLLDSEAVKHFGIRAKPLEPRQQLKPKKVYFLVELPKLPDEEKITRRVRSGIQMSAKDRLECLMLSRRAVSDLTAVNVRSSHGSEVAPGTGDGSDEGQNEAA
Secondary Structure (PSIPRED)
ccccccccccEEEEEccccEEEEcccccHHHHHHHccccEEEcccccccccccccccccccccccccEEEEEEccccccHHHHHHHHHccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccEEEEEEEEccEEEEEccccEHHHHHHcccccEEEccHHHHHccEEccccccccccccccEEEEEEccccccccccccccccccEccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mgntiggrrKAKVMKIdgetiklktpiqasevvkdypgyvlldseavkhfgirakpleprqqlkpkkvyflvelpklpdeekiTRRVRSGIQMSAKDRLECLMLSRRAVSDLTAVNVrsshgsevapgtgdgsdegqneaa
Flexible Loop (DISEMBL)
mgntiggrrkakvmkidgetiklktpiqasevvKDYPGYVLLDSEAVKHFGirakpleprqqlkpkkvyflvelpklpdeekitrrvrsgiqmsakDRLECLMLSRRAVSDLTAvnvrsshgsevapgtgdgsdegqneaa
Low Complexity Region (SEG)
MGNTIGGRRKAKVMKIDGETIKLKTPIQASEVVKDYPGYVLLDSEAVKHFGIRAKPLEPRQQLKPKKVYFLVELPKLPDEEKITRRVRSGIQMSAKDRLECLMLSRRAVSDLTAVNVRSSHGSEVAPGTGDGSDEGQNEAA
Disordered region (IsUnstruct)
***************IDGETIKLKTPIQASEVVKDYPGYVLLDSEAVKHFGIRAKPL*****LKPKKVYFLVELPKL********************RLECLMLSRRAV********************************
Disordered Region (DISOPRED)
*G*****RRKAKVMKIDGETIKLKTPIQASEVVKDYPGYVLLDSEAVKHFGIRAKPLEPRQQLKPKKVYFLV*********************************************************************
Disordered Region (DISEMBL)
**********AKVMKIDGETIKLKTPIQASEVVKDYPGYVLLDSEAVKHFGIRAKPLEPRQQLKPKKVYFLVELPKLPDEEKITRRVRSGIQMSAKDRLECLMLSRRAVSDLTAVN*************************
Disordered Region (DISPRO)
***TIGGRRKAKVMKIDGETIKLKTPIQASEVVKDYPGYVLLDSEAVKHFGIRAKPLEPRQQLKPKKVYFLVELPKLPD*****************DRLECLMLS************************************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGNTIGGRRKAKVMKIDGETIKLKTPIQASEVVKDYPGYVLLDSEAVKHFGIRAKPLEPRQQLKPKKVYFLVELPKLPDEEKITRRVRSGIQMSAKDRLECLMLSRRAVSDLTAVNVRSSHGSEVAPGTGDGSDEGQNEAA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	141	2.2.26 [Sep-21-2011]
Q6NLC8	225	Uncharacterized protein A	yes	no	0.921	0.577	0.617	2e-39

>sp|Q6NLC8|Y1648_ARATH Uncharacterized protein At1g66480 OS=Arabidopsis thaliana GN=At1g66480 PE=1 SV=1

 Score =  160 bits (405), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 87/141 (61%), Positives = 99/141 (70%), Gaps = 11/141 (7%)

Query: 1   MGNTIGGRRK-AKVMKIDGETIKLKTPIQASEVVKDYPGYVLLDSEAVKHFGIRAKPLEP 59
           MGN+I  +RK AKVMKIDGET ++KTP+ A EV  DYPGYVLLDS+AVKHFG+R+KPLEP
Sbjct: 1   MGNSITVKRKRAKVMKIDGETFRIKTPVTAREVTADYPGYVLLDSQAVKHFGVRSKPLEP 60

Query: 60  RQQLKPKKVYFLVELPKLPDEEKIT--------RRVRSGIQMSAKDRLECLMLSRRAVSD 111
            Q LKPKK YFLVELPKLP E            RRV SGI + AK+RL+ LMLSRR VSD
Sbjct: 61  NQTLKPKKTYFLVELPKLPPETTAVDTENKLPYRRVMSGIHVGAKERLDMLMLSRRTVSD 120

Query: 112 LTAVNVRSSHGSEVAPGTGDG 132
           +T    RS  G    P  G G
Sbjct: 121 VTI--GRSDGGDGFGPELGPG 139

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	141
225453134	171	PREDICTED: uncharacterized protein At1g6	0.921	0.760	0.696	5e-47
147810917	171	hypothetical protein VITISV_028979 [Viti	0.921	0.760	0.696	5e-47
224065162	216	predicted protein [Populus trichocarpa]	0.900	0.587	0.713	1e-45
224079451	216	predicted protein [Populus trichocarpa]	0.879	0.574	0.706	1e-43
225424195	231	PREDICTED: uncharacterized protein At1g6	0.794	0.484	0.787	2e-43
255570090	223	conserved hypothetical protein [Ricinus	0.943	0.596	0.649	3e-42
224111518	215	predicted protein [Populus trichocarpa]	0.900	0.590	0.664	2e-41
224099471	215	predicted protein [Populus trichocarpa]	0.794	0.520	0.716	8e-41
356551767	214	PREDICTED: uncharacterized protein At1g6	0.794	0.523	0.735	4e-39
356501049	214	PREDICTED: uncharacterized protein At1g6	0.794	0.523	0.726	7e-39

>gi|225453134|ref|XP_002271689.1| PREDICTED: uncharacterized protein At1g66480 [Vitis vinifera] gi|296087173|emb|CBI33547.3| unnamed protein product [Vitis vinifera]

 Score =  192 bits (487), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 92/132 (69%), Positives = 110/132 (83%), Gaps = 2/132 (1%)

Query: 1   MGNTIGGRRKAKVMKIDGETIKLKTPIQASEVVKDYPGYVLLDSEAVKHFGIRAKPLEPR 60
           MGN IGGR+KAKVMKIDG   KL+TP+++ EVV+DYPG+VLL+SEAVKHFGIRAKPL+P 
Sbjct: 1   MGNNIGGRKKAKVMKIDGTIFKLRTPVRSMEVVQDYPGHVLLESEAVKHFGIRAKPLQPH 60

Query: 61  QQLKPKKVYFLVELPKLPDEEKITRRVRSGIQMSAKDRLECLMLSRRAVSDLTAVNVRSS 120
           Q+LKPKK+YFL+ELP LP EEK  RR RS I MSAKDRLECLMLSRR+VSDL+   V+S+
Sbjct: 61  QELKPKKIYFLIELPTLPPEEKAHRRARSAINMSAKDRLECLMLSRRSVSDLSI--VKST 118

Query: 121 HGSEVAPGTGDG 132
           + +   PGT  G
Sbjct: 119 NVASDGPGTSAG 130

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147810917|emb|CAN65027.1| hypothetical protein VITISV_028979 [Vitis vinifera]

 Score =  192 bits (487), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 92/132 (69%), Positives = 110/132 (83%), Gaps = 2/132 (1%)

Query: 1   MGNTIGGRRKAKVMKIDGETIKLKTPIQASEVVKDYPGYVLLDSEAVKHFGIRAKPLEPR 60
           MGN IGGR+KAKVMKIDG   KL+TP+++ EVV+DYPG+VLL+SEAVKHFGIRAKPL+P 
Sbjct: 1   MGNNIGGRKKAKVMKIDGTIFKLRTPVRSMEVVQDYPGHVLLESEAVKHFGIRAKPLQPH 60

Query: 61  QQLKPKKVYFLVELPKLPDEEKITRRVRSGIQMSAKDRLECLMLSRRAVSDLTAVNVRSS 120
           Q+LKPKK+YFL+ELP LP EEK  RR RS I MSAKDRLECLMLSRR+VSDL+   V+S+
Sbjct: 61  QELKPKKIYFLIELPTLPPEEKAHRRARSAINMSAKDRLECLMLSRRSVSDLSI--VKST 118

Query: 121 HGSEVAPGTGDG 132
           + +   PGT  G
Sbjct: 119 NVASDGPGTSAG 130

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224065162|ref|XP_002301695.1| predicted protein [Populus trichocarpa] gi|222843421|gb|EEE80968.1| predicted protein [Populus trichocarpa]

 Score =  187 bits (475), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 97/136 (71%), Positives = 112/136 (82%), Gaps = 9/136 (6%)

Query: 1   MGNTIGGRRKAKVMKIDGETIKLKTPIQASEVVKDYPGYVLLDSEAVKHFGIRAKPLEPR 60
           MGN +G  +KAKVMKI+GET KLKTP +AS+VVKDYPGYVLLDSEAVKHFGIRAKPLEP+
Sbjct: 1   MGNNLGRGKKAKVMKINGETFKLKTPARASDVVKDYPGYVLLDSEAVKHFGIRAKPLEPQ 60

Query: 61  QQLKPKKVYFLVELPKLPDEE--KITRRVRSGIQMSAKDRLECLMLSRRAVSDLTAVNVR 118
           Q+LK KK+YFLVELPK P+E+  + TRRV+SGI MSAKDRLECLMLSRR+VSD+    VR
Sbjct: 61  QELKAKKIYFLVELPKFPEEKDPRNTRRVQSGIHMSAKDRLECLMLSRRSVSDIPM--VR 118

Query: 119 SSHGSEVAPGTGDGSD 134
           SS G      T DG +
Sbjct: 119 SSSGQ-----TSDGPN 129

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224079451|ref|XP_002305871.1| predicted protein [Populus trichocarpa] gi|222848835|gb|EEE86382.1| predicted protein [Populus trichocarpa]

 Score =  180 bits (457), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 89/126 (70%), Positives = 106/126 (84%), Gaps = 2/126 (1%)

Query: 1   MGNTIGGRRKAKVMKIDGETIKLKTPIQASEVVKDYPGYVLLDSEAVKHFGIRAKPLEPR 60
           MGN IGG  KAKVM ++GET KLKTP +A EVVKDYPGYVLLDSEAVKHFGIRAKPLEP+
Sbjct: 1   MGNNIGGGNKAKVMLVNGETFKLKTPARAGEVVKDYPGYVLLDSEAVKHFGIRAKPLEPQ 60

Query: 61  QQLKPKKVYFLVELPKLPDEE--KITRRVRSGIQMSAKDRLECLMLSRRAVSDLTAVNVR 118
           Q+LK KK+YFL+ELP++P+E+  + TRRVRS I MSAK+RLE LML+RR+VSDL+ V   
Sbjct: 61  QELKAKKIYFLIELPQIPEEKDPRSTRRVRSAIHMSAKERLENLMLTRRSVSDLSMVRPS 120

Query: 119 SSHGSE 124
           SS  S+
Sbjct: 121 SSQTSD 126

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225424195|ref|XP_002284189.1| PREDICTED: uncharacterized protein At1g66480 [Vitis vinifera] gi|297737714|emb|CBI26915.3| unnamed protein product [Vitis vinifera]

 Score =  180 bits (457), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 89/113 (78%), Positives = 102/113 (90%), Gaps = 1/113 (0%)

Query: 1   MGNTIGGRRKAKVMKIDGETIKLKTPIQASEVVKDYPGYVLLDSEAVKHFGIRAKPLEPR 60
           MGN++GG++ AKVMKIDGE IKLKTP+ A EVVKDYPG+VLL+SEAVKHFGIRAKPLE +
Sbjct: 1   MGNSLGGKKIAKVMKIDGEVIKLKTPVYAGEVVKDYPGHVLLESEAVKHFGIRAKPLESQ 60

Query: 61  QQLKPKKVYFLVELPKLPDEEKITRRVRSGIQMSAKDRLECLMLSRRAVSDLT 113
           Q+LKPK++YFLVELPK   EEK+ RRVRSGI MSAKDRLE LMLSRR+VSDLT
Sbjct: 61  QELKPKRLYFLVELPK-GAEEKVPRRVRSGINMSAKDRLESLMLSRRSVSDLT 112

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255570090|ref|XP_002526007.1| conserved hypothetical protein [Ricinus communis] gi|223534654|gb|EEF36347.1| conserved hypothetical protein [Ricinus communis]

 Score =  176 bits (446), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 87/134 (64%), Positives = 106/134 (79%), Gaps = 1/134 (0%)

Query: 1   MGNTIGGRRKAKVMKIDGETIKLKTPIQASEVVKDYPGYVLLDSEAVKHFGIRAKPLEPR 60
           MGN++GGR+  KVMKI GET KLKTP++A EVV+DYPG+VLL+SEAVKH+G RAKPLE  
Sbjct: 1   MGNSLGGRKTVKVMKITGETFKLKTPVKAGEVVRDYPGHVLLESEAVKHYGTRAKPLEQH 60

Query: 61  QQLKPKKVYFLVELPKLPDEEKITRRVRSGIQMSAKDRLECLMLSRRAVSDLTAVNVRSS 120
           Q L  K++YFLVELPK P  EK+ RRVRSGIQMSAKDRLE LML+RR+VSDLT +   + 
Sbjct: 61  QDLVAKRLYFLVELPK-PPTEKVPRRVRSGIQMSAKDRLENLMLARRSVSDLTIMKNSAC 119

Query: 121 HGSEVAPGTGDGSD 134
             S +AP   + +D
Sbjct: 120 SSSGIAPDQENETD 133

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224111518|ref|XP_002315887.1| predicted protein [Populus trichocarpa] gi|222864927|gb|EEF02058.1| predicted protein [Populus trichocarpa]

 Score =  173 bits (438), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 85/128 (66%), Positives = 100/128 (78%), Gaps = 1/128 (0%)

Query: 1   MGNTIGGRRKAKVMKIDGETIKLKTPIQASEVVKDYPGYVLLDSEAVKHFGIRAKPLEPR 60
           MGN++G ++ AKVMKI GET K KTP++A EVVKDYPG+VLL+SEAVKH+GIRAKPLE  
Sbjct: 1   MGNSLGWKKTAKVMKISGETFKFKTPVKAGEVVKDYPGHVLLESEAVKHYGIRAKPLEAH 60

Query: 61  QQLKPKKVYFLVELPKLPDEEKITRRVRSGIQMSAKDRLECLMLSRRAVSDLTAVNVRSS 120
           Q L PK++YFLVELPK P  EK+ RRVRSGI MSAKDRLE LMLSRR+ SDL+ +   S 
Sbjct: 61  QDLVPKRLYFLVELPKTPT-EKVPRRVRSGINMSAKDRLESLMLSRRSTSDLSIMKPASI 119

Query: 121 HGSEVAPG 128
              E   G
Sbjct: 120 EAEEAKSG 127

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224099471|ref|XP_002311497.1| predicted protein [Populus trichocarpa] gi|222851317|gb|EEE88864.1| predicted protein [Populus trichocarpa]

 Score =  171 bits (433), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 81/113 (71%), Positives = 98/113 (86%), Gaps = 1/113 (0%)

Query: 1   MGNTIGGRRKAKVMKIDGETIKLKTPIQASEVVKDYPGYVLLDSEAVKHFGIRAKPLEPR 60
           MGNT+GG++ AKVMKI+GET K KTP++A +VVKDYPG+VLL+SEAVKH+GIRAKPLE  
Sbjct: 1   MGNTLGGKKTAKVMKINGETFKFKTPVKAGDVVKDYPGHVLLESEAVKHYGIRAKPLEAH 60

Query: 61  QQLKPKKVYFLVELPKLPDEEKITRRVRSGIQMSAKDRLECLMLSRRAVSDLT 113
           Q L PK++YFLVELP+ P  E++ RRVRSGI MSAKDRLE LMLSRR+ SDL+
Sbjct: 61  QDLVPKRLYFLVELPETPT-ERVPRRVRSGINMSAKDRLESLMLSRRSTSDLS 112

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356551767|ref|XP_003544245.1| PREDICTED: uncharacterized protein At1g66480-like [Glycine max]

 Score =  166 bits (419), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 86/117 (73%), Positives = 103/117 (88%), Gaps = 5/117 (4%)

Query: 1   MGNTIGGRRKAKVMKIDGETIKLKTPIQASEVVKDYPGYVLLDSEAVKHFGIRAKPLEPR 60
           MGNT+G  +K KVMK+DGET KLKTP +A++VVKDYPG+VLLDSEAVKHFG+RAKPLEP 
Sbjct: 1   MGNTMGRSKKTKVMKVDGETFKLKTPARANDVVKDYPGHVLLDSEAVKHFGLRAKPLEPY 60

Query: 61  QQLKPKKVYFLVELPKL-PDEEK--ITRRVR-SGIQ-MSAKDRLECLMLSRRAVSDL 112
           Q+LKPKK+YFLVELPK+ P+EEK  + RRVR SGI+ M+A DRLE LMLS+R+VSDL
Sbjct: 61  QELKPKKIYFLVELPKIQPEEEKTALPRRVRSSGIRGMNASDRLELLMLSKRSVSDL 117

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356501049|ref|XP_003519341.1| PREDICTED: uncharacterized protein At1g66480-like [Glycine max]

 Score =  165 bits (417), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 85/117 (72%), Positives = 104/117 (88%), Gaps = 5/117 (4%)

Query: 1   MGNTIGGRRKAKVMKIDGETIKLKTPIQASEVVKDYPGYVLLDSEAVKHFGIRAKPLEPR 60
           MGNT+G  +KAKVMK+DGET+KLKTP +A++VVKDYPG+VLLDSEAVKHFG+RAKPLEP 
Sbjct: 1   MGNTMGRSKKAKVMKVDGETLKLKTPARANDVVKDYPGHVLLDSEAVKHFGLRAKPLEPY 60

Query: 61  QQLKPKKVYFLVELPKL-PDEEK--ITRRVR-SGIQ-MSAKDRLECLMLSRRAVSDL 112
           Q+LKP K+YFLVELPK+ P+EEK  + RRVR SGI+ M+A DRL+ LMLS+R+VSDL
Sbjct: 61  QELKPTKIYFLVELPKIQPEEEKTALPRRVRSSGIRGMNASDRLQLLMLSKRSVSDL 117

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	141
TAIR|locus:2028942	225	AT1G66480 "AT1G66480" [Arabido	0.921	0.577	0.624	3.9e-37
TAIR|locus:504956263	195	AT1G71015 "AT1G71015" [Arabido	0.872	0.630	0.580	1.5e-33
TAIR|locus:2038776	215	At17.1 "AT2G01340" [Arabidopsi	0.773	0.506	0.637	2e-33
TAIR|locus:2156035	214	AT5G37840 "AT5G37840" [Arabido	0.808	0.532	0.623	4.2e-31
TAIR|locus:2079572	187	AT3G61920 "AT3G61920" [Arabido	0.659	0.497	0.306	0.00058

TAIR|locus:2028942 AT1G66480 "AT1G66480" [Arabidopsis thaliana (taxid:3702)]

 Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
 Identities = 88/141 (62%), Positives = 101/141 (71%)

Query:     1 MGNTIGGRRK-AKVMKIDGETIKLKTPIQASEVVKDYPGYVLLDSEAVKHFGIRAKPLEP 59
             MGN+I  +RK AKVMKIDGET ++KTP+ A EV  DYPGYVLLDS+AVKHFG+R+KPLEP
Sbjct:     1 MGNSITVKRKRAKVMKIDGETFRIKTPVTAREVTADYPGYVLLDSQAVKHFGVRSKPLEP 60

Query:    60 RQQLKPKKVYFLVELPKLPDE-------EKIT-RRVRSGIQMSAKDRLECLMLSRRAVSD 111
              Q LKPKK YFLVELPKLP E        K+  RRV SGI + AK+RL+ LMLSRR VSD
Sbjct:    61 NQTLKPKKTYFLVELPKLPPETTAVDTENKLPYRRVMSGIHVGAKERLDMLMLSRRTVSD 120

Query:   112 LTAVNVRSSHGSEVAPGTGDG 132
             +T    RS  G    P  G G
Sbjct:   121 VTIG--RSDGGDGFGPELGPG 139

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

TAIR|locus:504956263 AT1G71015 "AT1G71015" [Arabidopsis thaliana (taxid:3702)]

 Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
 Identities = 72/124 (58%), Positives = 97/124 (78%)

Query:     1 MGNTIGGRRKAKVMKIDGETIKLKTPIQASEVVKDYPGYVLLDSEAVKHFGIRAKPLEPR 60
             MGN++G ++ A +M I+GE+ KLKTP++A  VVKD+PG+VLL+SEAVK  GIRAKPLEP 
Sbjct:     1 MGNSLGTKKTATIMNINGESFKLKTPVEAGTVVKDFPGHVLLESEAVKRLGIRAKPLEPH 60

Query:    61 QQLKPKKVYFLVELPKLPDEEKITRRVRSGIQMSAKDRLECLMLSRRAVSDLTAVNVRSS 120
             Q L+ K++YF+VELP+   +E+  RRVRSGIQMSAK+RLE L LSRR+ SDL+ +  ++ 
Sbjct:    61 QNLESKRIYFMVELPRTW-KERTPRRVRSGIQMSAKERLENLKLSRRSSSDLSVMKKKTE 119

Query:   121 HGSE 124
                E
Sbjct:   120 VNDE 123

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2038776 At17.1 "AT2G01340" [Arabidopsis thaliana (taxid:3702)]

 Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
 Identities = 72/113 (63%), Positives = 94/113 (83%)

Query:     1 MGNTIGGRRKAKVMKIDGETIKLKTPIQASEVVKDYPGYVLLDSEAVKHFGIRAKPLEPR 60
             MGN++GG++  KVMKIDGET KLKTP+ A EV+KD+PG+VLLDSE+VKH+G RAKPLE +
Sbjct:     1 MGNSLGGKKTTKVMKIDGETFKLKTPVTAEEVLKDFPGHVLLDSESVKHYGARAKPLEAK 60

Query:    61 QQLKPKKVYFLVELPKLPDEEKITRRVRSGIQMSAKDRLECLMLSRRAVSDLT 113
             Q+L+ K++YF+VE    P +E   RRVRSGI +SAK+RLE LML+RR+ SDL+
Sbjct:    61 QRLEAKRLYFVVE----PVKECPPRRVRSGIHVSAKERLESLMLARRSSSDLS 109

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0009624 "response to nematode" evidence=IEP

TAIR|locus:2156035 AT5G37840 "AT5G37840" [Arabidopsis thaliana (taxid:3702)]

 Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
 Identities = 73/117 (62%), Positives = 86/117 (73%)

Query:     1 MGNTIGGRR-KAKVMKIDGETIKLKTPIQASEVVKDYPGYVLLDSEAVKHFGIRAKPLEP 59
             MGNTI  RR K KVMKIDG+  +LKTP+ AS+  K+YPG+VLLDSE VK  G+RAKPLEP
Sbjct:     1 MGNTIMVRRNKVKVMKIDGDIFRLKTPVTASDATKEYPGFVLLDSETVKRLGVRAKPLEP 60

Query:    60 RQQLKPKKVYFLVELPKLPDEEKIT-RRVRSG-IQMSAKDRLECLMLSRRAVSDLTA 114
              Q LKP   YFLV+LP +    K+  RRV SG I + AK+RLE LMLSRR VSD+ A
Sbjct:    61 NQILKPNHTYFLVDLPPVDKRNKLPYRRVMSGNIHVGAKERLEMLMLSRRTVSDVGA 117

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2079572 AT3G61920 "AT3G61920" [Arabidopsis thaliana (taxid:3702)]

 Score = 97 (39.2 bits), Expect = 0.00058, P = 0.00058
 Identities = 34/111 (30%), Positives = 56/111 (50%)

Query:     1 MGNTI----GGRRKA--------KVMKIDGETIKLKTPIQASEVVKDYPGYVLLDSEAVK 48
             MGN +    GG RK         KV+  +G  ++L  PI A  +  ++PG+V+ DS +++
Sbjct:     1 MGNCVFKGNGGSRKLYDKDDSLIKVVTPNGGVMELHPPIFAEFITNEFPGHVIHDSLSLR 60

Query:    49 HFGIRAKPLEPRQQLKPKKVYFLVELPKLPDEEKITRRVRSGIQMSAKDRL 99
             H    + PL   ++L P  +Y+L  LP L      T ++ S  Q+S   R+
Sbjct:    61 H---SSPPLLHGEELFPGNIYYL--LP-LSSSAAATAQLDSSDQLSTPYRM 105


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.313   0.133   0.366    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      141       141   0.00091  102 3  11 23  0.36    32
                                                     30  0.47    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  514 (55 KB)
  Total size of DFA:  109 KB (2075 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.76u 0.16s 13.92t   Elapsed:  00:00:01
  Total cpu time:  13.76u 0.16s 13.92t   Elapsed:  00:00:01
  Start:  Sat May 11 03:46:25 2013   End:  Sat May 11 03:46:26 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00022371001 SubName- Full=Chromosome chr14 scaffold_26, whole genome shotgun sequence; (171 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	141
pfam14009	181	pfam14009, DUF4228, Domain of unknown function (DU	6e-20

>gnl|CDD|222492 pfam14009, DUF4228, Domain of unknown function (DUF4228)

 Score = 80.5 bits (199), Expect = 6e-20
 Identities = 35/148 (23%), Positives = 62/148 (41%), Gaps = 13/148 (8%)

Query: 1   MGNTI-------GGRRKAKVMKIDGETIKLKTPIQASEVVKDYPGYVLLDSEAVKHFGIR 53
           MGN +       G     KV+  DG+  +   P+ A+E++ +YPG+ + DS++  + G R
Sbjct: 1   MGNCLSCCLAPSGAAATVKVVHPDGKVREYSRPVTAAELMLEYPGHFVCDSDS-LYIGRR 59

Query: 54  AKPLEPRQQLKPKKVYFLVELPKLPDEEKITRRVRSGIQMSAKDRLECLMLSRRAVSDLT 113
              L P  +L+  ++YFL+   +L     +  +  + +  SA   L+     R + S  +
Sbjct: 60  IPALPPDDELERGQLYFLLPAERLQ--SVLAAKDMASLASSASSALKSASAKRSSSSRPS 117

Query: 114 AVNVRSSHGSEVAPGTGDGSDEGQNEAA 141
            V         V       S E   E  
Sbjct: 118 PVR---KSDGGVVRVKVVVSKEELEELL 142

This domain is found in plants. The function is not known. Length = 181

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	141
PF14009	181	DUF4228: Domain of unknown function (DUF4228)	99.96

>PF14009 DUF4228: Domain of unknown function (DUF4228)

Probab=99.96  E-value=5e-30  Score=192.75  Aligned_cols=79  Identities=37%  Similarity=0.708  Sum_probs=74.8

Q ss_pred             CCCCCCC-------CCceEEEccCCcEEEecCCccHHHHHhhCCCcEEEcCccccccCccccCCCCCCCCCCCCeEEEee
Q 032394            1 MGNTIGG-------RRKAKVMKIDGETIKLKTPIQASEVVKDYPGYVLLDSEAVKHFGIRAKPLEPRQQLKPKKVYFLVE   73 (141)
Q Consensus         1 MGN~~s~-------~~~aKVI~~DG~v~e~~~PvtA~eVm~e~PghfVc~S~~l~~~g~r~~~L~aDeeL~~G~iYFLLP   73 (141)
                      ||||++.       .+++|||++||+|++|+.||+|+|||++||+||||+++.+ +++.++++|++|++|++|++|||||
T Consensus         1 MGn~~~~~~~~~~~~~~vkvv~~~G~v~~~~~pv~a~evm~~~P~h~v~~~~~~-~~~~~~~~l~~d~~L~~G~~Y~llP   79 (181)
T PF14009_consen    1 MGNCVSCCLASSSSAATVKVVHPDGKVEEFKRPVTAAEVMLENPGHFVCDSDSF-RFGRRIKPLPPDEELQPGQIYFLLP   79 (181)
T ss_pred             CCCcccccccccCCCceEEEEcCCCcEEEeCCCcCHHHHHHHCCCCEEeccccc-cCCCcccCCCccCeecCCCEEEEEE
Confidence            9999963       5899999999999999999999999999999999999998 8999999999999999999999999


Q ss_pred             cCCCCCc
Q 032394           74 LPKLPDE   80 (141)
Q Consensus        74 l~rl~~~   80 (141)
                      +++++..
T Consensus        80 ~~~~~~~   86 (181)
T PF14009_consen   80 MSRLQSV   86 (181)
T ss_pred             ccccCcc
Confidence            9998753

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	141
d1tkea1	62	Threonyl-tRNA synthetase (ThrRS), N-terminal 'addi	83.13

>d1tkea1 d.15.10.1 (A:1-62) Threonyl-tRNA synthetase (ThrRS), N-terminal 'additional' domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: beta-Grasp (ubiquitin-like)
superfamily: TGS-like
family: TGS domain
domain: Threonyl-tRNA synthetase (ThrRS), N-terminal 'additional' domain
species: Escherichia coli [TaxId: 562]

Probab=83.13  E-value=0.49  Score=28.69  Aligned_cols=25  Identities=16%  Similarity=0.236  Sum_probs=22.5

Q ss_pred             eEEEccCCcEEEecCCccHHHHHhh
Q 032394           11 AKVMKIDGETIKLKTPIQASEVVKD   35 (141)
Q Consensus        11 aKVI~~DG~v~e~~~PvtA~eVm~e   35 (141)
                      ++|..+||++++|...+|+.|+..+
T Consensus         2 ~~ItlPDG~~~~~~~g~T~~diA~~   26 (62)
T d1tkea1           2 PVITLPDGSQRHYDHAVSPMDVALD   26 (62)
T ss_dssp             CEEECTTSCEEECSSCBCHHHHHHH
T ss_pred             CEEECCCCCEEEcCCCCCHHHHHHH
Confidence            4677799999999999999999877