BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032398
(141 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q59YL9|ESF2_CANAL Pre-rRNA-processing protein ESF2 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=ESF2 PE=3 SV=2
Length = 320
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 36/48 (75%)
Query: 94 LLEEAAKADRCGICYLSRIPAHMDPVKLRQILSQYGEIQRIYLAPEDP 141
L +E + R G+CYLSR+P +M P KLR +LS++GEI R++L PEDP
Sbjct: 113 LAKEQKRIKRTGVCYLSRVPPYMKPAKLRSVLSRFGEIDRLFLKPEDP 160
>sp|Q4HZ47|ESF2_GIBZE Pre-rRNA-processing protein ESF2 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=ESF2 PE=3
SV=1
Length = 321
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 36/57 (63%)
Query: 85 IVKSKKKQRLLEEAAKADRCGICYLSRIPAHMDPVKLRQILSQYGEIQRIYLAPEDP 141
+ ++ K+ L+ A + G+ YLSRIP M P KLR +L YG I RI+LAPEDP
Sbjct: 98 VTRTLTKKNLVASEAAIKKSGVVYLSRIPPFMKPAKLRSLLEPYGTINRIFLAPEDP 154
>sp|O74362|ESF2_SCHPO Pre-rRNA-processing protein esf2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=esf2 PE=1 SV=1
Length = 334
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 30/37 (81%)
Query: 103 RCGICYLSRIPAHMDPVKLRQILSQYGEIQRIYLAPE 139
R G+ YLSRIP +M P KLRQILSQYG+I R+YL PE
Sbjct: 120 RSGVIYLSRIPPYMAPNKLRQILSQYGKIGRVYLTPE 156
>sp|Q6BSS5|ESF2_DEBHA Pre-rRNA-processing protein ESF2 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=ESF2 PE=3 SV=2
Length = 303
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 53/87 (60%), Gaps = 14/87 (16%)
Query: 55 ADVIGKEKELNLMEEGKQ-EELNLKKRRSQSIVKSKKKQRLLEEAAKADRCGICYLSRIP 113
D+I +E +E KQ + +NLKK + + K +KK + + G+CYLS+IP
Sbjct: 58 TDIIDEE----TIENSKQAKNINLKKLTPEQLAKEQKKIK---------KTGVCYLSKIP 104
Query: 114 AHMDPVKLRQILSQYGEIQRIYLAPED 140
+M P KLR +LS++G+I R++L PED
Sbjct: 105 PYMKPAKLRSVLSRFGKIDRLFLKPED 131
>sp|A3LVD5|ESF2_PICST Pre-rRNA-processing protein ESF2 OS=Scheffersomyces stipitis
(strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL
Y-11545) GN=ESF2 PE=3 SV=2
Length = 347
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 38/55 (69%)
Query: 86 VKSKKKQRLLEEAAKADRCGICYLSRIPAHMDPVKLRQILSQYGEIQRIYLAPED 140
+K ++L +E + R G+CYLSRIP +M P LR ILS++G+I R++L PED
Sbjct: 127 IKKLTSRQLQKEQKRIKRTGVCYLSRIPPYMKPATLRSILSRFGKIDRLFLKPED 181
>sp|Q2GZQ4|ESF2_CHAGB Pre-rRNA-processing protein ESF2 OS=Chaetomium globosum (strain
ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL
1970) GN=ESF2 PE=3 SV=2
Length = 332
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 35/57 (61%)
Query: 85 IVKSKKKQRLLEEAAKADRCGICYLSRIPAHMDPVKLRQILSQYGEIQRIYLAPEDP 141
+ K K+ L+ A + G+ YLSRIP M P KLR +L YG+I RI+L PEDP
Sbjct: 101 VSKPLAKKNLVASEAAIKKSGVVYLSRIPPFMKPAKLRSLLEPYGKINRIFLTPEDP 157
>sp|Q7S8W7|ESF2_NEUCR Pre-rRNA-processing protein esf-2 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=esf-2 PE=3 SV=1
Length = 340
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
Query: 88 SKKKQRLLEEAAKADRCGICYLSRIPAHMDPVKLRQILSQYGEIQRIYLAPEDP 141
+KK + EEA K + G+ Y+SR+P M P KLR +L YG++ RI+LAPEDP
Sbjct: 109 TKKNLIVTEEAIK--KSGVVYISRVPPFMTPAKLRSLLEPYGKLNRIFLAPEDP 160
>sp|Q6FWS2|ESF2_CANGA Pre-rRNA-processing protein ESF2 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=ESF2 PE=3 SV=1
Length = 309
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 30/38 (78%)
Query: 103 RCGICYLSRIPAHMDPVKLRQILSQYGEIQRIYLAPED 140
+ G+ YLSRIP +M P K+RQILS++GEI R++L ED
Sbjct: 112 KTGVVYLSRIPPYMKPAKMRQILSRFGEIDRLFLKRED 149
>sp|Q0UM32|ESF2_PHANO Pre-rRNA-processing protein ESF2 OS=Phaeosphaeria nodorum (strain
SN15 / ATCC MYA-4574 / FGSC 10173) GN=ESF2 PE=3 SV=1
Length = 326
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 98 AAKADRCGICYLSRIPAHMDPVKLRQILSQYGEIQRIYLAPE 139
A K D+ G+ YLSR+P M P LR +L+ YG + +I+L PE
Sbjct: 111 APKKDKSGVIYLSRVPPFMKPTVLRSLLTPYGAVGKIFLTPE 152
>sp|Q6CSP8|ESF2_KLULA Pre-rRNA-processing protein ESF2 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=ESF2 PE=3 SV=1
Length = 293
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 30/38 (78%)
Query: 103 RCGICYLSRIPAHMDPVKLRQILSQYGEIQRIYLAPED 140
+ G+ YLSR+P +M P KLRQIL+++GE+ R++L E+
Sbjct: 89 KTGVVYLSRVPPYMKPAKLRQILTRFGEVDRLFLKREE 126
>sp|Q75DA3|ESF2_ASHGO Pre-rRNA-processing protein ESF2 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=ESF2
PE=3 SV=1
Length = 314
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 30/38 (78%)
Query: 103 RCGICYLSRIPAHMDPVKLRQILSQYGEIQRIYLAPED 140
+ G+ YLS+IP +M P K+RQILS++G++ R++L ED
Sbjct: 114 KTGVVYLSKIPPYMKPAKMRQILSRFGDLDRLFLKRED 151
>sp|P53743|ESF2_YEAST Pre-rRNA-processing protein ESF2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ESF2 PE=1 SV=1
Length = 316
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 104 CGICYLSRIPAHMDPVKLRQILSQYGEIQRIYLAPED 140
G+ Y S IP +M P K+RQIL+++GE+ R++L ED
Sbjct: 113 TGVVYFSSIPPYMKPAKMRQILTRFGEVDRLFLKKED 149
>sp|Q6CFT1|ESF2_YARLI Pre-rRNA-processing protein ESF2 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=ESF2 PE=3 SV=1
Length = 324
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 21/127 (16%)
Query: 15 RKQRKKKENFLVEITGKTDEEDEASRVENNLKSNVAEIGEADVIGKEKELNLMEEGKQEE 74
R +KK ++F E+ GKTD+ D+ E + + E + V
Sbjct: 57 RTSKKKTKDFF-ELAGKTDDGDDEEEDEEDEEEEEEEKEKKPV----------------- 98
Query: 75 LNLKKRRSQSIVKSKKKQRLLEEAAKADRCGICYLSRIPAHMDPVKLRQILSQYGEIQRI 134
K +++ K K+ + + K + G+ Y SRIP MDP KLR +L ++G + RI
Sbjct: 99 ---KTSSTKAKTKPMTKEEIEKHNKKIAKTGVVYFSRIPPLMDPGKLRMLLQRFGIVDRI 155
Query: 135 YLAPEDP 141
YL PEDP
Sbjct: 156 YLVPEDP 162
>sp|Q54BL2|EFS2_DICDI Putative pre-rRNA-processing protein esf2 OS=Dictyostelium
discoideum GN=esf2 PE=3 SV=1
Length = 296
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 26/33 (78%)
Query: 105 GICYLSRIPAHMDPVKLRQILSQYGEIQRIYLA 137
GI YLS IP+ M P KL+Q+L++YG++ R++L
Sbjct: 110 GIIYLSTIPSRMKPAKLKQLLAKYGKVTRMHLV 142
>sp|Q4KLM5|ABT1_RAT Activator of basal transcription 1 OS=Rattus norvegicus GN=Abt1
PE=1 SV=1
Length = 268
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 105 GICYLSRIPAHMDPVKLRQILSQYGEIQRIYLAPEDP 141
GI YL +P P+ +R +LS YGE+ R++ EDP
Sbjct: 47 GIVYLGHVPPRFRPLHVRNLLSVYGEVGRVFFQAEDP 83
>sp|Q148M8|ABT1_BOVIN Activator of basal transcription 1 OS=Bos taurus GN=ABT1 PE=2 SV=1
Length = 275
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 105 GICYLSRIPAHMDPVKLRQILSQYGEIQRIYLAPED 140
GI YL IP P+ +R +LS YGE+ R++ ED
Sbjct: 46 GIVYLGHIPPRFRPLHVRNLLSAYGEVGRVFFQAED 81
>sp|Q9ULW3|ABT1_HUMAN Activator of basal transcription 1 OS=Homo sapiens GN=ABT1 PE=1
SV=1
Length = 272
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 105 GICYLSRIPAHMDPVKLRQILSQYGEIQRIYLAPED 140
GI YL IP P+ +R +LS YGE+ R++ ED
Sbjct: 46 GIVYLGHIPPRFRPLHVRNLLSAYGEVGRVFFQAED 81
>sp|Q5R9Y3|ABT1_PONAB Activator of basal transcription 1 OS=Pongo abelii GN=ABT1 PE=2
SV=1
Length = 272
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 105 GICYLSRIPAHMDPVKLRQILSQYGEIQRIYLAPED 140
GI YL IP P+ +R +LS YGE+ R++ ED
Sbjct: 46 GIVYLGHIPPRFRPLHVRNLLSAYGEVGRVFFQAED 81
>sp|Q9QYL7|ABT1_MOUSE Activator of basal transcription 1 OS=Mus musculus GN=Abt1 PE=2
SV=1
Length = 269
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 105 GICYLSRIPAHMDPVKLRQILSQYGEIQRIYLAPED 140
GI YL +P P+ +R +LS YGE+ R++ ED
Sbjct: 48 GIVYLGHVPPRFRPLHVRNLLSAYGEVGRVFFQAED 83
>sp|P0CL96|ESF2_CRYNJ Pre-rRNA-processing protein ESF2 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=ESF2 PE=3 SV=1
Length = 266
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 24/35 (68%)
Query: 101 ADRCGICYLSRIPAHMDPVKLRQILSQYGEIQRIY 135
A GI ++SR+P M P K+R ++ ++G+I ++Y
Sbjct: 62 AQTPGIVFISRVPPGMTPQKIRHLMGRWGDIGKVY 96
>sp|P0CL97|ESF2_CRYNB Pre-rRNA-processing protein ESF2 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=ESF2 PE=3 SV=1
Length = 266
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 24/35 (68%)
Query: 101 ADRCGICYLSRIPAHMDPVKLRQILSQYGEIQRIY 135
A GI ++SR+P M P K+R ++ ++G+I ++Y
Sbjct: 62 AQTPGIVFISRVPPGMTPQKIRHLMGRWGDIGKVY 96
>sp|Q4WZJ0|ESF2_ASPFU Pre-rRNA-processing protein esf2 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=esf2
PE=3 SV=2
Length = 361
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 100 KADRCGICYLSRIPAHMDPVKLRQILSQ--YGEIQRIYLAPEDP 141
K ++ G+ YLS +P ++ P L+ +L +G I +++L PE P
Sbjct: 144 KKNKTGVIYLSSLPPYLKPFALKSMLETRGFGPITKVFLTPEVP 187
>sp|A1DIN9|ESF2_NEOFI Pre-rRNA-processing protein esf2 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=esf2
PE=3 SV=1
Length = 365
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 100 KADRCGICYLSRIPAHMDPVKLRQILSQ--YGEIQRIYLAPEDP 141
K ++ G+ YLS +P ++ P L+ +L +G I +++L PE P
Sbjct: 144 KKNKTGVIYLSSLPPYLKPFALKSMLETRGFGPITKVFLTPEVP 187
>sp|Q2UB17|ESF2_ASPOR Pre-rRNA-processing protein esf2 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=esf2 PE=3 SV=1
Length = 335
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Query: 100 KADRCGICYLSRIPAHMDPVKLRQILS--QYGEIQRIYLAP 138
K ++ G+ YLS +P ++ P L+ +L +G I +++L+P
Sbjct: 122 KKNKTGVVYLSSLPPYLKPFALKSMLEARSFGPITKVFLSP 162
>sp|A2QJZ4|ESF2_ASPNC Pre-rRNA-processing protein esf2 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=esf2 PE=3 SV=1
Length = 304
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 104 CGICYLSRIPAHMDPVKLRQILS--QYGEIQRIYLAPE 139
G+ Y S +P ++ P L+ +L +G I R++L+PE
Sbjct: 104 TGVIYFSSLPPYLKPFALKNLLETRSFGPITRVFLSPE 141
>sp|A1C807|ESF2_ASPCL Pre-rRNA-processing protein esf2 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=esf2 PE=3 SV=1
Length = 368
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 100 KADRCGICYLSRIPAHMDPVKLRQILSQYG--EIQRIYLAPEDP 141
K ++ G+ YLS +P ++ P L+ +L G I +++L PE P
Sbjct: 143 KKNKTGVVYLSSLPPYLKPFALKSMLETRGFEPITKVFLTPEVP 186
>sp|Q99NH0|ANR17_MOUSE Ankyrin repeat domain-containing protein 17 OS=Mus musculus
GN=Ankrd17 PE=1 SV=2
Length = 2603
Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 16/87 (18%)
Query: 19 KKKENFLVEITGKTDEEDEASR--VENNLKSNVAEIGEADVIGKEKELNLMEEGKQEELN 76
+ E+ + E GK E ++ + +E N + E+ AD + KEK EELN
Sbjct: 798 QSPESIVEEAQGKLTELEQRIKEAIEKNAQLQSLELAHADQLTKEK---------IEELN 848
Query: 77 LKKRRSQSIVKSKKKQRLLEEAAKADR 103
K R + I +KKQ++LEE K +R
Sbjct: 849 --KTREEQI---QKKQKILEELQKVER 870
>sp|P53927|NOP15_YEAST Ribosome biogenesis protein 15 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=NOP15 PE=1 SV=1
Length = 220
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 8/63 (12%)
Query: 75 LNLKKRRSQSIVKSKKKQRLLEEAAKADRCGICYLSRIPAHMDPVKLRQILSQYGEIQRI 134
LN KK+ ++ K K ++ LEE + GI Y+SR+P +L + +Q+G+++ +
Sbjct: 69 LNPKKQANE---KKSKDKKTLEEYS-----GIIYVSRLPHGFHEKELSKYFAQFGDLKEV 120
Query: 135 YLA 137
LA
Sbjct: 121 RLA 123
>sp|O75179|ANR17_HUMAN Ankyrin repeat domain-containing protein 17 OS=Homo sapiens
GN=ANKRD17 PE=1 SV=3
Length = 2603
Score = 31.6 bits (70), Expect = 1.7, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 16/87 (18%)
Query: 19 KKKENFLVEITGKTDEEDEASR--VENNLKSNVAEIGEADVIGKEKELNLMEEGKQEELN 76
+ E+ + E GK E ++ + +E N + E+ AD + KEK EELN
Sbjct: 802 QSPESIVEEAQGKLTELEQRIKEAIEKNAQLQSLELAHADQLTKEK---------IEELN 852
Query: 77 LKKRRSQSIVKSKKKQRLLEEAAKADR 103
K R + I +KKQ++LEE K +R
Sbjct: 853 --KTREEQI---QKKQKILEELQKVER 874
>sp|O74978|YQL5_SCHPO Uncharacterized RNA-binding protein C1827.05c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPCC1827.05c PE=4 SV=1
Length = 276
Score = 29.3 bits (64), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 13/72 (18%)
Query: 66 LMEEGKQEELNLKKRRSQSIVKSKKKQRLLEEAAKADRCGICYLSRIPAHMDPVKLRQIL 125
+M+ G+ E +KK+ S++ KKK G+ Y+ R+P ++R
Sbjct: 79 IMDLGEDAEKTIKKKVSENKNLQKKK-------------GVLYVGRLPHGFYEKQMRMYF 125
Query: 126 SQYGEIQRIYLA 137
SQ+G + R+ ++
Sbjct: 126 SQFGPVLRLRMS 137
>sp|Q6ZV73|FGD6_HUMAN FYVE, RhoGEF and PH domain-containing protein 6 OS=Homo sapiens
GN=FGD6 PE=1 SV=2
Length = 1430
Score = 29.3 bits (64), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 12 RSERKQRKKKENFLVEITGKTDEEDEASR--VENNLKSNVAEIGEADVIGKEKELNLMEE 69
R+ R R+K + E T + D +S EN+LK N + +V+ K+++++ M+
Sbjct: 321 RTARLLRQKCVDTPSESTEEPGNSDSSSSCLTENSLKINKISVLHQNVLCKQEQVDKMKL 380
Query: 70 GKQEELNLKKRR-SQSIVKSKK 90
G + ELN++ +Q +V S+K
Sbjct: 381 GNKSELNMESNSDAQDLVNSQK 402
>sp|Q5ADP6|SUS1_CANAL Protein SUS1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876)
GN=SUS1 PE=3 SV=1
Length = 119
Score = 28.9 bits (63), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 24/41 (58%)
Query: 30 GKTDEEDEASRVENNLKSNVAEIGEADVIGKEKELNLMEEG 70
T ++DE ++++ ++ N+ G D+I K+ +L L E G
Sbjct: 5 NSTQQQDELDQIKSKIQDNLISSGNYDIINKQLKLQLYESG 45
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.129 0.346
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,558,292
Number of Sequences: 539616
Number of extensions: 1970545
Number of successful extensions: 12500
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 150
Number of HSP's successfully gapped in prelim test: 482
Number of HSP's that attempted gapping in prelim test: 11379
Number of HSP's gapped (non-prelim): 1399
length of query: 141
length of database: 191,569,459
effective HSP length: 105
effective length of query: 36
effective length of database: 134,909,779
effective search space: 4856752044
effective search space used: 4856752044
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 55 (25.8 bits)