BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032400
(141 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P42749|UBC5_ARATH Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana GN=UBC5
PE=2 SV=2
Length = 185
Score = 212 bits (540), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 117/189 (61%), Positives = 128/189 (67%), Gaps = 52/189 (27%)
Query: 1 MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYP 60
MSSPSKRREMDLMKLMMSDYKVEMINDGMQEF+VEF+GPK+S Y+GGVWKIRVELPDAYP
Sbjct: 1 MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFFVEFSGPKDSIYEGGVWKIRVELPDAYP 60
Query: 61 YKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMF----------------------- 97
YKSPS+GF+ KIYHPNVDE+SGSVCLDVINQTWSPMF
Sbjct: 61 YKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPL 120
Query: 98 --------------------EFCEKYAKPEDIGGATEEKSSDDEELSEDEYAS-----SD 132
E+CEKYAKP TEE SSDD E+SEDEYAS D
Sbjct: 121 NGEAAALMMRDRPTYEQRVKEYCEKYAKPR---ADTEEMSSDD-EMSEDEYASDGDDEDD 176
Query: 133 EAVAGQPDP 141
A+AG+ DP
Sbjct: 177 VAIAGKLDP 185
>sp|P42748|UBC4_ARATH Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana GN=UBC4
PE=2 SV=2
Length = 187
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 117/191 (61%), Positives = 126/191 (65%), Gaps = 54/191 (28%)
Query: 1 MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYP 60
MSSPSKRREMD+MKLMMSDYKVE INDGMQEFYVEFNGPK+S YQGGVWKIRVELPDAYP
Sbjct: 1 MSSPSKRREMDMMKLMMSDYKVETINDGMQEFYVEFNGPKDSLYQGGVWKIRVELPDAYP 60
Query: 61 YKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMF----------------------- 97
YKSPS+GF+ KIYHPNVDELSGSVCLDVINQTWSPMF
Sbjct: 61 YKSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPL 120
Query: 98 --------------------EFCEKYAKPEDIGGATEEKSSDDEELSEDEYASSDE---- 133
E+CEKYAKP G E S DEELSE+EY S +E
Sbjct: 121 NGEAAALMMRDRPAYEQRVKEYCEKYAKP----GEGSEDKSSDEELSEEEYGSDNEDDDD 176
Query: 134 ---AVAGQPDP 141
A+AG+PDP
Sbjct: 177 DDVAIAGKPDP 187
>sp|P16577|UBC4_WHEAT Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum aestivum GN=UBC4
PE=1 SV=1
Length = 184
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 108/184 (58%), Positives = 121/184 (65%), Gaps = 43/184 (23%)
Query: 1 MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYP 60
MSSPSKRREMDLMKLMMSDYKV+MINDGM EF+V F+GPK+S YQGGVWK+RVEL +AYP
Sbjct: 1 MSSPSKRREMDLMKLMMSDYKVDMINDGMHEFFVHFHGPKDSIYQGGVWKVRVELTEAYP 60
Query: 61 YKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMF----------------------- 97
YKSPSIGF NKIYHPNVDE+SGSVCLDVINQTWSPMF
Sbjct: 61 YKSPSIGFTNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNIFEVFLPQLLLYPNPSDPL 120
Query: 98 --------------------EFCEKYAKPEDIGGATEEKSSDDEELSEDEYASSDEAVAG 137
E+CE+YAKPEDI EE+ SD+E + Y S DEA+ G
Sbjct: 121 NGEAASLMMRDKNAYENKVKEYCERYAKPEDISPEEEEEESDEELSDAEGYDSGDEAIMG 180
Query: 138 QPDP 141
DP
Sbjct: 181 HADP 184
>sp|P42750|UBC6_ARATH Ubiquitin-conjugating enzyme E2 6 OS=Arabidopsis thaliana GN=UBC6
PE=2 SV=2
Length = 183
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 89/152 (58%), Positives = 102/152 (67%), Gaps = 43/152 (28%)
Query: 1 MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYP 60
M+SPSKRREMD+MKLMMSDYKV+ +ND +Q FYV F+GP +S YQGGVWKI+VELP+AYP
Sbjct: 1 MASPSKRREMDMMKLMMSDYKVDTVNDDLQMFYVTFHGPTDSLYQGGVWKIKVELPEAYP 60
Query: 61 YKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMF----------------------- 97
YKSPS+GFVNKIYHPNVDE SG+VCLDVINQTWSPMF
Sbjct: 61 YKSPSVGFVNKIYHPNVDESSGAVCLDVINQTWSPMFDLINVFESFLPQLLLYPNPSDPF 120
Query: 98 --------------------EFCEKYAKPEDI 109
E+CEKYAKPE+I
Sbjct: 121 NGEAASLLMRDRAAYELKVKEYCEKYAKPEEI 152
>sp|Q9P7R4|UBC8_SCHPO Ubiquitin-conjugating enzyme E2 8 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubc8 PE=3 SV=1
Length = 184
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 71/103 (68%), Positives = 87/103 (84%)
Query: 1 MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYP 60
MSSP +R E D+MKL+MSDY+V ++ND MQEFYV F+GP E+ Y GG+WK+ VELP YP
Sbjct: 1 MSSPRRRIETDVMKLLMSDYEVTLVNDNMQEFYVRFHGPSETPYSGGIWKVHVELPSEYP 60
Query: 61 YKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFEFCEKY 103
+KSPSIGFVN+I+HPN+DELSGSVCLDVINQTWSPMF+ +
Sbjct: 61 WKSPSIGFVNRIFHPNIDELSGSVCLDVINQTWSPMFDMINIF 103
>sp|P28263|UBC8_YEAST Ubiquitin-conjugating enzyme E2-24 kDa OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBC8 PE=1 SV=2
Length = 218
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 65/100 (65%), Positives = 85/100 (85%)
Query: 1 MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYP 60
MSS +R E D+MKL+MSD++V++IND MQEF+V+F GPK++ Y+ GVW++ VELPD YP
Sbjct: 1 MSSSKRRIETDVMKLLMSDHQVDLINDSMQEFHVKFLGPKDTPYENGVWRLHVELPDNYP 60
Query: 61 YKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFEFC 100
YKSPSIGFVNKI+HPN+D SGS+CLDVIN TWSP+++
Sbjct: 61 YKSPSIGFVNKIFHPNIDIASGSICLDVINSTWSPLYDLI 100
>sp|P62257|UBE2H_MOUSE Ubiquitin-conjugating enzyme E2 H OS=Mus musculus GN=Ube2h PE=2
SV=1
Length = 183
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 58/106 (54%), Positives = 84/106 (79%), Gaps = 4/106 (3%)
Query: 1 MSSPS---KRREMDLMKLMMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPD 57
MSSPS +R + D++KL+ S ++V ++ G+ EF V+F GP+ + Y+GGVWK+RV+LPD
Sbjct: 1 MSSPSPGKRRMDTDVVKLIESKHEVTILG-GLNEFVVKFYGPQGTPYEGGVWKVRVDLPD 59
Query: 58 AYPYKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFEFCEKY 103
YP+KSPSIGF+NKI+HPN+DE SG+VCLDVINQTW+ +++ +
Sbjct: 60 KYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIF 105
>sp|P62256|UBE2H_HUMAN Ubiquitin-conjugating enzyme E2 H OS=Homo sapiens GN=UBE2H PE=1
SV=1
Length = 183
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 58/106 (54%), Positives = 84/106 (79%), Gaps = 4/106 (3%)
Query: 1 MSSPS---KRREMDLMKLMMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPD 57
MSSPS +R + D++KL+ S ++V ++ G+ EF V+F GP+ + Y+GGVWK+RV+LPD
Sbjct: 1 MSSPSPGKRRMDTDVVKLIESKHEVTILG-GLNEFVVKFYGPQGTPYEGGVWKVRVDLPD 59
Query: 58 AYPYKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFEFCEKY 103
YP+KSPSIGF+NKI+HPN+DE SG+VCLDVINQTW+ +++ +
Sbjct: 60 KYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIF 105
>sp|Q32LN1|UBE2H_BOVIN Ubiquitin-conjugating enzyme E2 H OS=Bos taurus GN=UBE2H PE=2 SV=1
Length = 183
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 58/106 (54%), Positives = 84/106 (79%), Gaps = 4/106 (3%)
Query: 1 MSSPS---KRREMDLMKLMMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPD 57
MSSPS +R + D++KL+ S ++V ++ G+ EF V+F GP+ + Y+GGVWK+RV+LPD
Sbjct: 1 MSSPSPGKRRMDTDVVKLIESKHEVTILG-GLNEFVVKFYGPQGTPYEGGVWKVRVDLPD 59
Query: 58 AYPYKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFEFCEKY 103
YP+KSPSIGF+NKI+HPN+DE SG+VCLDVINQTW+ +++ +
Sbjct: 60 KYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIF 105
>sp|Q94A97|UBC35_ARATH Ubiquitin-conjugating enzyme E2 35 OS=Arabidopsis thaliana GN=UBC35
PE=1 SV=1
Length = 153
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 27 DGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSVCL 86
D M+ F V GP +S Y+GGV+K+ + LP+ YP +P + F+ KIYHPN+D+L G +CL
Sbjct: 32 DNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL-GRICL 90
Query: 87 DVINQTWSPMFEF 99
D++ WSP +
Sbjct: 91 DILKDKWSPALQI 103
>sp|P52490|UBC13_YEAST Ubiquitin-conjugating enzyme E2 13 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBC13 PE=1 SV=1
Length = 153
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 26 NDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSVC 85
+D ++ F V GP++S Y+ G++++ + LPD YP ++P + F+ KIYHPN+D L G +C
Sbjct: 29 DDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDRL-GRIC 87
Query: 86 LDVINQTWSPMFEF 99
LDV+ WSP +
Sbjct: 88 LDVLKTNWSPALQI 101
>sp|Q9FZ48|UBC36_ARATH Ubiquitin-conjugating enzyme E2 36 OS=Arabidopsis thaliana GN=UBC36
PE=1 SV=1
Length = 153
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 27 DGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSVCL 86
+ M+ F V GP +S Y+GGV+K+ + LP+ YP +P + F+ KIYHPN+D+L G +CL
Sbjct: 32 ENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL-GRICL 90
Query: 87 DVINQTWSPMFEF 99
D++ WSP +
Sbjct: 91 DILKDKWSPALQI 103
>sp|P52486|UBCD4_DROME Ubiquitin-conjugating enzyme E2-22 kDa OS=Drosophila melanogaster
GN=UbcD4 PE=1 SV=2
Length = 199
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
Query: 6 KRREMDLMK---LMMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYK 62
KR ++M+ ++ K+E++ND E E GP ++ Y+GG + + +++P+ YP+
Sbjct: 10 KREFKEVMRSEEIVQCSIKIELVNDSWTELRGEIAGPPDTPYEGGKFVLEIKVPETYPFN 69
Query: 63 SPSIGFVNKIYHPNVDELSGSVCLDVINQTWS 94
P + F+ +I+HPN+ ++G++CLD++ W+
Sbjct: 70 PPKVRFITRIWHPNISSVTGAICLDILKDNWA 101
>sp|P35128|UBE2N_DROME Ubiquitin-conjugating enzyme E2 N OS=Drosophila melanogaster GN=ben
PE=2 SV=1
Length = 151
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 32 FYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSVCLDVINQ 91
F+V GP +S ++GGV+K+ + LP+ YP +P + F+ KIYHPN+D L G +CLDV+
Sbjct: 35 FHVIVTGPNDSPFEGGVFKLELFLPEDYPMSAPKVRFITKIYHPNIDRL-GRICLDVLKD 93
Query: 92 TWSPMFEF 99
WSP +
Sbjct: 94 KWSPALQI 101
>sp|O13685|UBC13_SCHPO Ubiquitin-conjugating enzyme E2 13 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubc13 PE=1 SV=1
Length = 148
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Query: 27 DGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSVCL 86
D ++ F + GP++S+Y+GG + + + LPD YP P++ F+ KIYHPNVD+L G +CL
Sbjct: 29 DNLRYFKITMEGPQQSAYEGGKFHLELFLPDEYPMMPPNVRFLTKIYHPNVDKL-GRICL 87
Query: 87 DVINQTWSPMFEFCEKYAKPEDIGGATEEKSSDDEELSEDEYASSDEAVAG 137
+ + WSP + + + GA D ++++ + +A+A
Sbjct: 88 STLKKDWSPALQIRTVLLSIQALMGAPNPDDPLDNDVAKIWKENEPQAIAN 138
>sp|P61087|UBE2K_MOUSE Ubiquitin-conjugating enzyme E2 K OS=Mus musculus GN=Ube2k PE=1
SV=3
Length = 200
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 51/74 (68%)
Query: 21 KVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEL 80
KV+++++ E E GP ++ Y+GG +++ +++P+ YP+ P + F+ KI+HPN+ +
Sbjct: 28 KVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSV 87
Query: 81 SGSVCLDVINQTWS 94
+G++CLD++ W+
Sbjct: 88 TGAICLDILKDQWA 101
>sp|P61086|UBE2K_HUMAN Ubiquitin-conjugating enzyme E2 K OS=Homo sapiens GN=UBE2K PE=1
SV=3
Length = 200
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 51/74 (68%)
Query: 21 KVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEL 80
KV+++++ E E GP ++ Y+GG +++ +++P+ YP+ P + F+ KI+HPN+ +
Sbjct: 28 KVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSV 87
Query: 81 SGSVCLDVINQTWS 94
+G++CLD++ W+
Sbjct: 88 TGAICLDILKDQWA 101
>sp|P61085|UBE2K_BOVIN Ubiquitin-conjugating enzyme E2 K OS=Bos taurus GN=UBE2K PE=1 SV=3
Length = 200
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 51/74 (68%)
Query: 21 KVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEL 80
KV+++++ E E GP ++ Y+GG +++ +++P+ YP+ P + F+ KI+HPN+ +
Sbjct: 28 KVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSV 87
Query: 81 SGSVCLDVINQTWS 94
+G++CLD++ W+
Sbjct: 88 TGAICLDILKDQWA 101
>sp|Q5R7J6|UBE2N_PONAB Ubiquitin-conjugating enzyme E2 N OS=Pongo abelii GN=UBE2N PE=2
SV=1
Length = 152
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 32 FYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSVCLDVINQ 91
F+V GP++S ++GG +K+ + LP+ YP +P + F+ KIYHPNVD+L G +CLD++
Sbjct: 35 FHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKL-GRICLDILKD 93
Query: 92 TWSPMFEF 99
WSP +
Sbjct: 94 KWSPALQI 101
>sp|P61089|UBE2N_MOUSE Ubiquitin-conjugating enzyme E2 N OS=Mus musculus GN=Ube2n PE=1
SV=1
Length = 152
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 32 FYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSVCLDVINQ 91
F+V GP++S ++GG +K+ + LP+ YP +P + F+ KIYHPNVD+L G +CLD++
Sbjct: 35 FHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKL-GRICLDILKD 93
Query: 92 TWSPMFEF 99
WSP +
Sbjct: 94 KWSPALQI 101
>sp|P61088|UBE2N_HUMAN Ubiquitin-conjugating enzyme E2 N OS=Homo sapiens GN=UBE2N PE=1
SV=1
Length = 152
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 32 FYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSVCLDVINQ 91
F+V GP++S ++GG +K+ + LP+ YP +P + F+ KIYHPNVD+L G +CLD++
Sbjct: 35 FHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKL-GRICLDILKD 93
Query: 92 TWSPMFEF 99
WSP +
Sbjct: 94 KWSPALQI 101
>sp|Q0P5K3|UBE2N_BOVIN Ubiquitin-conjugating enzyme E2 N OS=Bos taurus GN=UBE2N PE=2 SV=1
Length = 152
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 32 FYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSVCLDVINQ 91
F+V GP++S ++GG +K+ + LP+ YP +P + F+ KIYHPNVD+L G +CLD++
Sbjct: 35 FHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKL-GRICLDILKD 93
Query: 92 TWSPMFEF 99
WSP +
Sbjct: 94 KWSPALQI 101
>sp|Q9EQX9|UBE2N_RAT Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus GN=Ube2n
PE=1 SV=1
Length = 152
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 32 FYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSVCLDVINQ 91
F+V GP++S ++GG +K+ + LP+ YP +P + F+ KIYHPNVD+L G +CLD++
Sbjct: 35 FHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKL-GRICLDILKD 93
Query: 92 TWSPMFEF 99
WSP +
Sbjct: 94 KWSPALQI 101
>sp|Q4R4I1|UBE2N_MACFA Ubiquitin-conjugating enzyme E2 N OS=Macaca fascicularis GN=UBE2N
PE=2 SV=1
Length = 152
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 32 FYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSVCLDVINQ 91
F+V GP++S ++GG +K+ + LP+ YP +P + F+ KIYHPNVD+ SG +CLD++
Sbjct: 35 FHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDK-SGRICLDILKD 93
Query: 92 TWSPMFEF 99
WSP +
Sbjct: 94 KWSPALQI 101
>sp|O74810|UBC1_SCHPO Ubiquitin-conjugating enzyme E2 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubc1 PE=3 SV=2
Length = 217
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 58/105 (55%)
Query: 21 KVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEL 80
+V IND + F GP+ + Y+GG + + +E+P YP++ P + F KIYHPNV
Sbjct: 25 QVWTINDDISHLKGMFRGPEGTPYEGGYFVVDIEIPIDYPFRPPKMNFDTKIYHPNVSSQ 84
Query: 81 SGSVCLDVINQTWSPMFEFCEKYAKPEDIGGATEEKSSDDEELSE 125
+G++CLD++ WSP++ + + E + D ++++
Sbjct: 85 TGAICLDILKDQWSPVYTMKSALISLQSLLCTPEPSNPQDAQVAQ 129
>sp|D3ZDK2|UB2D1_RAT Ubiquitin-conjugating enzyme E2 D1 OS=Rattus norvegicus GN=Ube2d1
PE=1 SV=1
Length = 147
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D + + GP +S+YQGGV+ + V P YP+K P I F KIYHPN++ +GS+
Sbjct: 26 VGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMF 97
CLD++ WSP
Sbjct: 85 CLDILRSQWSPAL 97
>sp|P61080|UB2D1_MOUSE Ubiquitin-conjugating enzyme E2 D1 OS=Mus musculus GN=Ube2d1 PE=2
SV=1
Length = 147
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D + + GP +S+YQGGV+ + V P YP+K P I F KIYHPN++ +GS+
Sbjct: 26 VGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMF 97
CLD++ WSP
Sbjct: 85 CLDILRSQWSPAL 97
>sp|P51668|UB2D1_HUMAN Ubiquitin-conjugating enzyme E2 D1 OS=Homo sapiens GN=UBE2D1 PE=1
SV=1
Length = 147
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D + + GP +S+YQGGV+ + V P YP+K P I F KIYHPN++ +GS+
Sbjct: 26 VGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMF 97
CLD++ WSP
Sbjct: 85 CLDILRSQWSPAL 97
>sp|Q2TA10|UB2D1_BOVIN Ubiquitin-conjugating enzyme E2 D1 OS=Bos taurus GN=UBE2D1 PE=2
SV=1
Length = 147
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D + + GP +S+YQGGV+ + V P YP+K P I F KIYHPN++ +GS+
Sbjct: 26 VGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMF 97
CLD++ WSP
Sbjct: 85 CLDILRSQWSPAL 97
>sp|Q86K32|UBE2N_DICDI Probable ubiquitin-conjugating enzyme E2 N OS=Dictyostelium
discoideum GN=ube2n PE=3 SV=2
Length = 154
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 26 NDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSVC 85
D + F V +GP +S ++GGV+ + + L D YP +P + F+ KIYHPN+D+L G +C
Sbjct: 29 TDNFRYFKVAISGPLDSPFEGGVFNLELFLTDDYPMSAPKVRFLTKIYHPNIDKL-GRIC 87
Query: 86 LDVINQTWSPMFEF 99
LD++ WSP +
Sbjct: 88 LDILKDKWSPALQI 101
>sp|Q9VTY6|UBE2C_DROME Ubiquitin-conjugating enzyme E2 C OS=Drosophila melanogaster GN=vih
PE=1 SV=1
Length = 178
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 60/97 (61%), Gaps = 4/97 (4%)
Query: 5 SKRREMDLMKLMMSDYK-VEMINDGMQEF-YV-EFNGPKESSYQGGVWKIRVELPDAYPY 61
SKR +LM LMM++ + + DG F +V GP+ + Y G +++ ++ P++YPY
Sbjct: 34 SKRLHKELMNLMMANERGISAFPDGENIFKWVGTIAGPRNTVYSGQTYRLSLDFPNSYPY 93
Query: 62 KSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFE 98
+P + F+ +HPNVD L G++CLD++ WS +++
Sbjct: 94 AAPVVKFLTSCFHPNVD-LQGAICLDILKDKWSALYD 129
>sp|P61078|UB2D3_RAT Ubiquitin-conjugating enzyme E2 D3 OS=Rattus norvegicus GN=Ube2d3
PE=2 SV=1
Length = 147
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D M + GP +S YQGGV+ + + P YP+K P + F +IYHPN++ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFEF 99
CLD++ WSP
Sbjct: 85 CLDILRSQWSPALTI 99
>sp|Q5R4V7|UB2D3_PONAB Ubiquitin-conjugating enzyme E2 D3 OS=Pongo abelii GN=UBE2D3 PE=2
SV=1
Length = 147
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D M + GP +S YQGGV+ + + P YP+K P + F +IYHPN++ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFEF 99
CLD++ WSP
Sbjct: 85 CLDILRSQWSPALTI 99
>sp|P61079|UB2D3_MOUSE Ubiquitin-conjugating enzyme E2 D3 OS=Mus musculus GN=Ube2d3 PE=1
SV=1
Length = 147
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D M + GP +S YQGGV+ + + P YP+K P + F +IYHPN++ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFEF 99
CLD++ WSP
Sbjct: 85 CLDILRSQWSPALTI 99
>sp|Q4R5N4|UB2D3_MACFA Ubiquitin-conjugating enzyme E2 D3 OS=Macaca fascicularis
GN=UBE2D3 PE=2 SV=1
Length = 147
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D M + GP +S YQGGV+ + + P YP+K P + F +IYHPN++ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFEF 99
CLD++ WSP
Sbjct: 85 CLDILRSQWSPALTI 99
>sp|P61077|UB2D3_HUMAN Ubiquitin-conjugating enzyme E2 D3 OS=Homo sapiens GN=UBE2D3 PE=1
SV=1
Length = 147
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D M + GP +S YQGGV+ + + P YP+K P + F +IYHPN++ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFEF 99
CLD++ WSP
Sbjct: 85 CLDILRSQWSPALTI 99
>sp|Q06AA9|UB2D2_PIG Ubiquitin-conjugating enzyme E2 D2 OS=Sus scrofa GN=UBE2D2 PE=2
SV=1
Length = 147
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D M + GP +S YQGGV+ + + P YP+K P + F +IYHPN++ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFEF 99
CLD++ WSP
Sbjct: 85 CLDILRSQWSPALTI 99
>sp|P62840|UB2D2_XENLA Ubiquitin-conjugating enzyme E2 D2 OS=Xenopus laevis GN=ube2d2
PE=1 SV=1
Length = 147
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D M + GP +S YQGGV+ + + P YP+K P + F +IYHPN++ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFEF 99
CLD++ WSP
Sbjct: 85 CLDILRSQWSPALTI 99
>sp|P62839|UB2D2_RAT Ubiquitin-conjugating enzyme E2 D2 OS=Rattus norvegicus GN=Ube2d2
PE=1 SV=1
Length = 147
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D M + GP +S YQGGV+ + + P YP+K P + F +IYHPN++ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFEF 99
CLD++ WSP
Sbjct: 85 CLDILRSQWSPALTI 99
>sp|P62838|UB2D2_MOUSE Ubiquitin-conjugating enzyme E2 D2 OS=Mus musculus GN=Ube2d2 PE=1
SV=1
Length = 147
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D M + GP +S YQGGV+ + + P YP+K P + F +IYHPN++ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFEF 99
CLD++ WSP
Sbjct: 85 CLDILRSQWSPALTI 99
>sp|P62837|UB2D2_HUMAN Ubiquitin-conjugating enzyme E2 D2 OS=Homo sapiens GN=UBE2D2 PE=1
SV=1
Length = 147
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D M + GP +S YQGGV+ + + P YP+K P + F +IYHPN++ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFEF 99
CLD++ WSP
Sbjct: 85 CLDILRSQWSPALTI 99
>sp|Q1RMX2|UB2D2_BOVIN Ubiquitin-conjugating enzyme E2 D2 OS=Bos taurus GN=UBE2D2 PE=2
SV=1
Length = 147
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D M + GP +S YQGGV+ + + P YP+K P + F +IYHPN++ +GS+
Sbjct: 26 VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFEF 99
CLD++ WSP
Sbjct: 85 CLDILRSQWSPALTI 99
>sp|P35129|UBC2_CAEEL Ubiquitin-conjugating enzyme E2 2 OS=Caenorhabditis elegans
GN=let-70 PE=1 SV=1
Length = 147
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D + + GP ES YQGGV+ + + P YP+K P + F +IYHPN++ +GS+
Sbjct: 26 VGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFEF 99
CLD++ WSP
Sbjct: 85 CLDILRSQWSPALTI 99
>sp|Q9Y2X8|UB2D4_HUMAN Ubiquitin-conjugating enzyme E2 D4 OS=Homo sapiens GN=UBE2D4 PE=1
SV=1
Length = 147
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D + + GP +S YQGGV+ + + P YP+K P + F KIYHPN++ +GS+
Sbjct: 26 VGDDLFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTKIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMF 97
CLD++ WSP
Sbjct: 85 CLDILRSQWSPAL 97
>sp|Q9FI61|UBC27_ARATH Ubiquitin-conjugating enzyme E2 27 OS=Arabidopsis thaliana GN=UBC27
PE=2 SV=1
Length = 192
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%)
Query: 26 NDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSVC 85
+D + GP + Y+GG ++I + +PD YP++ P + F K++HPN+ SG++C
Sbjct: 29 SDNLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFEPPKMQFSTKVWHPNISSQSGAIC 88
Query: 86 LDVINQTWSPMFEFCEKYAKPEDIGGATEEKSSDDEELSE 125
LD++ WSP + + A E K D ++E
Sbjct: 89 LDILKDQWSPALTLKTALVSIQALLSAPEPKDPQDAVVAE 128
>sp|P25867|UBCD1_DROME Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster
GN=eff PE=2 SV=1
Length = 147
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D + + GP +S YQGGV+ + + P YP+K P + F +IYHPN++ +GS+
Sbjct: 26 VGDDLFHWQATIMGPPDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGSI 84
Query: 85 CLDVINQTWSPMFEF 99
CLD++ WSP
Sbjct: 85 CLDILRSQWSPALTI 99
>sp|P15732|UBC5_YEAST Ubiquitin-conjugating enzyme E2-16 kDa OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBC5 PE=1 SV=1
Length = 148
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 25 INDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSV 84
+ D + + GP +S Y GGV+ + + P YP+K P + F KIYHPN++ SG++
Sbjct: 27 VGDDLYHWQASIMGPSDSPYAGGVFFLSIHFPTDYPFKPPKVNFTTKIYHPNINS-SGNI 85
Query: 85 CLDVINQTWSPMFEF 99
CLD++ WSP
Sbjct: 86 CLDILKDQWSPALTL 100
>sp|Q95044|UBE2C_SPISO Ubiquitin-conjugating enzyme E2 C OS=Spisula solidissima GN=UBE2C
PE=1 SV=1
Length = 177
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 4/99 (4%)
Query: 3 SPSKRREMDLMKLMMS-DYKVEMINDG--MQEFYVEFNGPKESSYQGGVWKIRVELPDAY 59
S SKR + +L L+MS D + DG + ++ +GPK++ Y+ +K+ +E P Y
Sbjct: 30 SVSKRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDY 89
Query: 60 PYKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFE 98
PYK P + F +HPNVD+ SG++CLD++ + W+ ++
Sbjct: 90 PYKPPVVKFTTPCWHPNVDQ-SGNICLDILKENWTASYD 127
>sp|Q94490|UBCB_DICDI Ubiquitin conjugating enzyme E2 B OS=Dictyostelium discoideum
GN=ubcB PE=1 SV=1
Length = 148
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 11 DLMKLMMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAYPYKSPSIGFVN 70
D++K S +++D +Q++ GP+ S ++ GV+ + +++P YP+K P++ F
Sbjct: 13 DMLKTPPSWCSAHLVDDNLQKWKATVQGPEGSPFEKGVFSMDIDIPADYPFKPPTLKFTT 72
Query: 71 KIYHPNVDELSGSVCLDVINQTWSPMFEFCE 101
KIYHPN+ G++C +V + TWSP + +
Sbjct: 73 KIYHPNIKTSDGAICAEVFS-TWSPQLKILD 102
>sp|P35134|UBC11_ARATH Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana
GN=UBC11 PE=2 SV=2
Length = 148
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 1 MSSPSKRREM-DLMKLMMSDYKVEMINDGMQEFYVEFNGPKESSYQGGVWKIRVELPDAY 59
M+S +E+ DL K S+ + + M + GP ES Y GGV+ + + P Y
Sbjct: 1 MASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDY 60
Query: 60 PYKSPSIGFVNKIYHPNVDELSGSVCLDVINQTWSPMFEF 99
P+K P + F K+YHPN++ +GS+CLD++ + WSP
Sbjct: 61 PFKPPKVSFKTKVYHPNINS-NGSICLDILKEQWSPALTI 99
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.131 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,949,008
Number of Sequences: 539616
Number of extensions: 2487873
Number of successful extensions: 7296
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 297
Number of HSP's successfully gapped in prelim test: 52
Number of HSP's that attempted gapping in prelim test: 6816
Number of HSP's gapped (non-prelim): 378
length of query: 141
length of database: 191,569,459
effective HSP length: 105
effective length of query: 36
effective length of database: 134,909,779
effective search space: 4856752044
effective search space used: 4856752044
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 55 (25.8 bits)