BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032409
(141 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q40359|ALFIN_MEDSA PHD finger protein Alfin1 OS=Medicago sativa GN=ALFIN-1 PE=1 SV=1
Length = 257
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 78/98 (79%), Positives = 84/98 (85%), Gaps = 3/98 (3%)
Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVVTGNAKQP 60
MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKN+RK+LFQMINDLPT+FE+ TG AKQ
Sbjct: 86 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNDRKRLFQMINDLPTVFELATGTAKQS 145
Query: 61 KDQSANHN---SSKSKSSGKSRPAESQTKAVKMSPPPK 95
KDQ HN +SK KSSGKSR +ESQTK VKMS P K
Sbjct: 146 KDQLTAHNNGSNSKYKSSGKSRQSESQTKGVKMSAPVK 183
>sp|Q8LA16|ALFL7_ARATH PHD finger protein ALFIN-LIKE 7 OS=Arabidopsis thaliana GN=AL7 PE=1
SV=1
Length = 252
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 82/96 (85%), Positives = 89/96 (92%), Gaps = 1/96 (1%)
Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVVTGNAKQP 60
MQEKDW+SLVAVHSDSWL++VAFYFGARFGFGKNERK+LFQMINDLPTIFEVVTGNAKQ
Sbjct: 85 MQEKDWISLVAVHSDSWLISVAFYFGARFGFGKNERKRLFQMINDLPTIFEVVTGNAKQS 144
Query: 61 KDQSANHNSSKSKSSGKS-RPAESQTKAVKMSPPPK 95
KDQSANHNSS+SKSSG R +ES TKA KMSPPP+
Sbjct: 145 KDQSANHNSSRSKSSGGKPRHSESHTKASKMSPPPR 180
>sp|Q8S8M9|ALFL6_ARATH PHD finger protein ALFIN-LIKE 6 OS=Arabidopsis thaliana GN=AL6 PE=2
SV=1
Length = 256
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 78/97 (80%), Positives = 87/97 (89%), Gaps = 2/97 (2%)
Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVVTGNAKQP 60
MQEKDW+SLVAVHSDSWLL+VAFYFGARFGFGKNERK+LFQMIN+LPTIFEVV+GNAKQ
Sbjct: 85 MQEKDWVSLVAVHSDSWLLSVAFYFGARFGFGKNERKRLFQMINELPTIFEVVSGNAKQS 144
Query: 61 KDQSANHNSSKSKSSG-KSRPAESQTKAVKM-SPPPK 95
KD S N+N+SKSK SG KSR +ES +K KM SPPPK
Sbjct: 145 KDLSVNNNNSKSKPSGVKSRQSESLSKVAKMSSPPPK 181
>sp|Q2R837|ALFL8_ORYSJ PHD finger protein ALFIN-LIKE 8 OS=Oryza sativa subsp. japonica
GN=Os11g0244800 PE=2 SV=1
Length = 254
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/97 (63%), Positives = 70/97 (72%), Gaps = 3/97 (3%)
Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVVTGNAKQP 60
M EKDWLSLVAVHSD+WLLAVAFYFGARFGF K RK+LF MIN+LPTI+EVVTG AK+
Sbjct: 83 MDEKDWLSLVAVHSDTWLLAVAFYFGARFGFDKESRKRLFSMINNLPTIYEVVTGTAKKQ 142
Query: 61 KDQSANHNSSKSKSSGK--SRPAESQTKAVKMSPPPK 95
+ S KS SG SR E ++ KM PPPK
Sbjct: 143 SKEKTPKTSGKSNKSGTKPSRQPEPNSRGPKM-PPPK 178
>sp|B8BJV8|ALFL8_ORYSI PHD finger protein ALFIN-LIKE 8 OS=Oryza sativa subsp. indica
GN=OsI_35671 PE=3 SV=1
Length = 254
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/97 (63%), Positives = 70/97 (72%), Gaps = 3/97 (3%)
Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVVTGNAKQP 60
M EKDWLSLVAVHSD+WLLAVAFYFGARFGF K RK+LF MIN+LPTI+EVVTG AK+
Sbjct: 83 MDEKDWLSLVAVHSDTWLLAVAFYFGARFGFDKESRKRLFSMINNLPTIYEVVTGTAKKQ 142
Query: 61 KDQSANHNSSKSKSSGK--SRPAESQTKAVKMSPPPK 95
+ S KS SG SR E ++ KM PPPK
Sbjct: 143 SKEKTPKTSGKSNKSGTKPSRQPEPNSRGPKM-PPPK 178
>sp|Q9M2B4|ALFL3_ARATH PHD finger protein ALFIN-LIKE 3 OS=Arabidopsis thaliana GN=AL3 PE=2
SV=1
Length = 250
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 71/90 (78%), Gaps = 1/90 (1%)
Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVVTGNAK-Q 59
+ EK+WLSLVA+HSD+WLL+V+FYFG+RF F K ERK+LF MIND+PTIFEVVTG AK +
Sbjct: 86 LSEKEWLSLVAIHSDAWLLSVSFYFGSRFSFHKEERKRLFNMINDVPTIFEVVTGMAKAK 145
Query: 60 PKDQSANHNSSKSKSSGKSRPAESQTKAVK 89
K +AN N +KSKS+ K R +E ++ K
Sbjct: 146 DKSSAANQNGNKSKSNSKVRTSEGKSSKTK 175
>sp|Q5XEM9|ALFL5_ARATH PHD finger protein ALFIN-LIKE 5 OS=Arabidopsis thaliana GN=AL5 PE=2
SV=1
Length = 260
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 55/88 (62%), Positives = 74/88 (84%), Gaps = 3/88 (3%)
Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVVTGNA-KQ 59
MQE++WLSLVAVHSD+WLL+V+FYFG+RFGF + +RK+LF MIN++PT++EVVTGNA KQ
Sbjct: 86 MQERNWLSLVAVHSDAWLLSVSFYFGSRFGFDRADRKRLFSMINEVPTVYEVVTGNAEKQ 145
Query: 60 PKDQ--SANHNSSKSKSSGKSRPAESQT 85
K+ SAN N ++SKS+ K R ES++
Sbjct: 146 TKEMPSSANQNGNRSKSNSKMRGLESKS 173
>sp|Q6Z7F4|ALFL7_ORYSJ PHD finger protein ALFIN-LIKE 7 OS=Oryza sativa subsp. japonica
GN=Os02g0564100 PE=2 SV=1
Length = 267
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 72/101 (71%), Gaps = 1/101 (0%)
Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVVTGNAKQP 60
M EKDWLSLVAVHSD+WLL+VAFYFGARFGF K R++LF MIN LPT++EVVTG AK+
Sbjct: 102 MIEKDWLSLVAVHSDAWLLSVAFYFGARFGFDKEARRRLFTMINGLPTVYEVVTGIAKKQ 161
Query: 61 KDQSANHNSSKSKSSGKSRPAESQTKAVKMSPPPKDDDDSG 101
S + S + S+ + S +K K P PKD++DSG
Sbjct: 162 TKVSNGSSKSNKSNPKPSKQSNSNSKPAK-PPQPKDEEDSG 201
>sp|B8ADZ3|ALFL7_ORYSI PHD finger protein ALFIN-LIKE 7 OS=Oryza sativa subsp. indica
GN=OsI_07694 PE=3 SV=1
Length = 267
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 72/101 (71%), Gaps = 1/101 (0%)
Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVVTGNAKQP 60
M EKDWLSLVAVHSD+WLL+VAFYFGARFGF K R++LF MIN LPT++EVVTG AK+
Sbjct: 102 MIEKDWLSLVAVHSDAWLLSVAFYFGARFGFDKEARRRLFTMINGLPTVYEVVTGIAKKQ 161
Query: 61 KDQSANHNSSKSKSSGKSRPAESQTKAVKMSPPPKDDDDSG 101
S + S + S+ + S +K K P PKD++DSG
Sbjct: 162 TKVSNGSSKSNKSNPKPSKQSNSNSKPAK-PPQPKDEEDSG 201
>sp|Q60DW3|ALFL5_ORYSJ PHD finger protein ALFIN-LIKE 5 OS=Oryza sativa subsp. japonica
GN=Os05g0419100 PE=2 SV=1
Length = 258
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 54/81 (66%), Positives = 64/81 (79%), Gaps = 1/81 (1%)
Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVVTGNA-KQ 59
M EKDWL+LVAVHSDSWLLAVAFYF ARFGF K R++LF MIN+LPTIFEVVTG A KQ
Sbjct: 87 MNEKDWLALVAVHSDSWLLAVAFYFAARFGFDKEARRRLFNMINNLPTIFEVVTGAAKKQ 146
Query: 60 PKDQSANHNSSKSKSSGKSRP 80
K+++ N + +K S K +P
Sbjct: 147 TKEKAPNSTNKPNKPSSKMQP 167
>sp|A2Y4R8|ALFL5_ORYSI PHD finger protein ALFIN-LIKE 5 OS=Oryza sativa subsp. indica
GN=OsI_19996 PE=3 SV=1
Length = 258
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 54/81 (66%), Positives = 64/81 (79%), Gaps = 1/81 (1%)
Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVVTGNA-KQ 59
M EKDWL+LVAVHSDSWLLAVAFYF ARFGF K R++LF MIN+LPTIFEVVTG A KQ
Sbjct: 87 MNEKDWLALVAVHSDSWLLAVAFYFAARFGFDKEARRRLFNMINNLPTIFEVVTGAAKKQ 146
Query: 60 PKDQSANHNSSKSKSSGKSRP 80
K+++ N + +K S K +P
Sbjct: 147 TKEKAPNSTNKPNKPSSKMQP 167
>sp|Q6YTY3|ALFL9_ORYSJ PHD finger protein ALFIN-LIKE 9 OS=Oryza sativa subsp. japonica
GN=Os07g0608400 PE=2 SV=1
Length = 278
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 48/58 (82%), Positives = 55/58 (94%)
Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVVTGNAK 58
MQEKDWLS+VAVHSD+WLL+VAFYFGARFGF KN+RK+LF MINDLPTIFEVV+G +K
Sbjct: 83 MQEKDWLSMVAVHSDAWLLSVAFYFGARFGFDKNDRKRLFGMINDLPTIFEVVSGKSK 140
>sp|B8B8C5|ALFL9_ORYSI PHD finger protein ALFIN-LIKE 9 OS=Oryza sativa subsp. indica
GN=OsI_26819 PE=3 SV=1
Length = 277
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 48/58 (82%), Positives = 55/58 (94%)
Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVVTGNAK 58
MQEKDWLS+VAVHSD+WLL+VAFYFGARFGF KN+RK+LF MINDLPTIFEVV+G +K
Sbjct: 83 MQEKDWLSMVAVHSDAWLLSVAFYFGARFGFDKNDRKRLFGMINDLPTIFEVVSGKSK 140
>sp|A2WXR5|ALFL6_ORYSI PHD finger protein ALFIN-LIKE 6 OS=Oryza sativa subsp. indica
GN=OsI_04717 PE=3 SV=1
Length = 272
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 76/95 (80%), Gaps = 3/95 (3%)
Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVVTGNA-KQ 59
M EKDWL+LVAVHSDSWLL+VAFYFGARFGF + R++LF MIN+LPTIFEVVTG A KQ
Sbjct: 103 MNEKDWLALVAVHSDSWLLSVAFYFGARFGFDREARRRLFNMINNLPTIFEVVTGAAKKQ 162
Query: 60 PKDQSANHNSSKSKSSGKSRP-AESQTKAVKMSPP 93
K+++ N +S +K S K + AES++K+ K+S P
Sbjct: 163 AKEKTPNSSSKSNKPSSKVQSKAESRSKS-KLSAP 196
>sp|Q7F2Z1|ALFL6_ORYSJ PHD finger protein ALFIN-LIKE 6 OS=Oryza sativa subsp. japonica
GN=Os01g0887700 PE=2 SV=1
Length = 272
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 76/95 (80%), Gaps = 3/95 (3%)
Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVVTGNA-KQ 59
M EKDWL+LVAVHSDSWLL+VAFYFGARFGF + R++LF MIN+LPTIFEVVTG A KQ
Sbjct: 103 MNEKDWLALVAVHSDSWLLSVAFYFGARFGFDREARRRLFNMINNLPTIFEVVTGAAKKQ 162
Query: 60 PKDQSANHNSSKSKSSGKSRP-AESQTKAVKMSPP 93
K+++ N +S +K S K + AES++K+ K+S P
Sbjct: 163 AKEKTPNSSSKSNKPSSKVQSKAESRSKS-KLSAP 196
>sp|Q7XUW3|ALFL4_ORYSJ PHD finger protein ALFIN-LIKE 4 OS=Oryza sativa subsp. japonica
GN=Os04g0444900 PE=2 SV=2
Length = 256
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 50/77 (64%), Positives = 61/77 (79%), Gaps = 2/77 (2%)
Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVVTGNAKQP 60
MQEKDWLSL+AVHSDSWLL+VAFYFGARFGF K R++LF M + LPT+FEVV+G
Sbjct: 90 MQEKDWLSLIAVHSDSWLLSVAFYFGARFGFDKKARERLFMMTSSLPTVFEVVSGGVNT- 148
Query: 61 KDQSANHNSSKSKSSGK 77
+ ++AN SSK+KS K
Sbjct: 149 QSKTAN-GSSKNKSGSK 164
>sp|A2XTW9|ALFL4_ORYSI PHD finger protein ALFIN-LIKE 4 OS=Oryza sativa subsp. indica
GN=OsI_16049 PE=3 SV=1
Length = 256
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 50/77 (64%), Positives = 61/77 (79%), Gaps = 2/77 (2%)
Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVVTGNAKQP 60
MQEKDWLSL+AVHSDSWLL+VAFYFGARFGF K R++LF M + LPT+FEVV+G
Sbjct: 90 MQEKDWLSLIAVHSDSWLLSVAFYFGARFGFDKKARERLFMMTSSLPTVFEVVSGGVNT- 148
Query: 61 KDQSANHNSSKSKSSGK 77
+ ++AN SSK+KS K
Sbjct: 149 QSKTAN-GSSKNKSGSK 164
>sp|Q9SRM4|ALFL2_ARATH PHD finger protein ALFIN-LIKE 2 OS=Arabidopsis thaliana GN=AL2 PE=2
SV=1
Length = 246
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 65/87 (74%), Gaps = 3/87 (3%)
Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVVTGNAKQP 60
MQ KDWLSLVAVHSD WLL+V+FYFGAR +NERK+LF +INDLPT+F+VVTG
Sbjct: 86 MQRKDWLSLVAVHSDCWLLSVSFYFGAR--LNRNERKRLFSLINDLPTLFDVVTGRKAMK 143
Query: 61 KDQSANHNSSKSKSSGKSRPAESQTKA 87
++ ++ + SKS+ +G R + QTK+
Sbjct: 144 DNKPSSDSGSKSR-NGTKRSIDGQTKS 169
>sp|Q9FFF5|ALFL1_ARATH PHD finger protein ALFIN-LIKE 1 OS=Arabidopsis thaliana GN=AL1 PE=1
SV=1
Length = 241
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 60/87 (68%), Gaps = 3/87 (3%)
Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVVTGNAKQP 60
MQ KDWLSLVAVHSD WLL+V+ YFGAR +NERK+LF +INDLPT+FEVVTG K
Sbjct: 84 MQRKDWLSLVAVHSDCWLLSVSSYFGAR--LNRNERKRLFSLINDLPTLFEVVTGR-KPI 140
Query: 61 KDQSANHNSSKSKSSGKSRPAESQTKA 87
KD + + +G R E QTK+
Sbjct: 141 KDGKPSMDLGSKSRNGVKRSIEGQTKS 167
>sp|Q75IR6|ALFL1_ORYSJ PHD finger protein ALFIN-LIKE 1 OS=Oryza sativa subsp. japonica
GN=Os05g0163100 PE=2 SV=1
Length = 258
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 62/78 (79%), Gaps = 3/78 (3%)
Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVVTGNAK-Q 59
M +DWL+LVAVHSDSWL++VAFY+ AR +N+RK+LF M+NDLPT++EVV+G+ + +
Sbjct: 99 MNRRDWLALVAVHSDSWLVSVAFYYAAR--LNRNDRKRLFGMMNDLPTVYEVVSGSRQSK 156
Query: 60 PKDQSANHNSSKSKSSGK 77
+D+S NSS++K S K
Sbjct: 157 ERDRSGMDNSSRNKISSK 174
>sp|A2Y0Q2|ALFL1_ORYSI PHD finger protein ALFIN-LIKE 1 OS=Oryza sativa subsp. indica
GN=OsI_18576 PE=3 SV=1
Length = 258
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 62/78 (79%), Gaps = 3/78 (3%)
Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVVTGNAK-Q 59
M +DWL+LVAVHSDSWL++VAFY+ AR +N+RK+LF M+NDLPT++EVV+G+ + +
Sbjct: 99 MNRRDWLALVAVHSDSWLVSVAFYYAAR--LNRNDRKRLFGMMNDLPTVYEVVSGSRQSK 156
Query: 60 PKDQSANHNSSKSKSSGK 77
+D+S NSS++K S K
Sbjct: 157 ERDRSGMDNSSRNKISSK 174
>sp|Q84TV4|ALFL3_ORYSJ PHD finger protein ALFIN-LIKE 3 OS=Oryza sativa subsp. japonica
GN=Os03g0818300 PE=2 SV=1
Length = 247
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 60/86 (69%), Gaps = 4/86 (4%)
Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVVTGNAKQP 60
M +DWLSLVAVHSDSWL++VAF+F AR NERK+LF MINDLPT++E + + K
Sbjct: 89 MNRRDWLSLVAVHSDSWLVSVAFFFAAR--LNGNERKRLFNMINDLPTVYEALV-DRKHV 145
Query: 61 KDQSANHNSSKSKSSGKSRPAESQTK 86
+D+S +S KSK S K R E Q K
Sbjct: 146 RDRSGVDSSGKSKHSTK-RTGEGQVK 170
>sp|B8AMA8|ALFL3_ORYSI PHD finger protein ALFIN-LIKE 3 OS=Oryza sativa subsp. indica
GN=OsI_14081 PE=3 SV=2
Length = 247
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 60/86 (69%), Gaps = 4/86 (4%)
Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVVTGNAKQP 60
M +DWLSLVAVHSDSWL++VAF+F AR NERK+LF MINDLPT++E + + K
Sbjct: 89 MNRRDWLSLVAVHSDSWLVSVAFFFAAR--LNGNERKRLFNMINDLPTVYEALV-DRKHV 145
Query: 61 KDQSANHNSSKSKSSGKSRPAESQTK 86
+D+S +S KSK S K R E Q K
Sbjct: 146 RDRSGVDSSGKSKHSTK-RTGEGQVK 170
>sp|Q8H383|ALFL2_ORYSJ PHD finger protein ALFIN-LIKE 2 OS=Oryza sativa subsp. japonica
GN=Os07g0233300 PE=2 SV=1
Length = 244
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/97 (51%), Positives = 63/97 (64%), Gaps = 5/97 (5%)
Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVVTGNAKQP 60
M +DWLSLVAVHSDSWLL+VAF+FGAR NERK+LF +IND PT+ E ++
Sbjct: 87 MHRRDWLSLVAVHSDSWLLSVAFFFGAR--LNGNERKRLFSLINDHPTVLEALSDRKHGR 144
Query: 61 KDQSANHNSSKSKSSGKSRPAESQTKAVKMSPPPKDD 97
++S N SKS+ SGK R + QTK + P DD
Sbjct: 145 DNKSGADNGSKSRHSGK-RANDVQTKTSR--PAVVDD 178
>sp|B8B8I3|ALFL2_ORYSI PHD finger protein ALFIN-LIKE 2 OS=Oryza sativa subsp. indica
GN=OsI_25444 PE=3 SV=1
Length = 244
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/97 (51%), Positives = 63/97 (64%), Gaps = 5/97 (5%)
Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVVTGNAKQP 60
M +DWLSLVAVHSDSWLL+VAF+FGAR NERK+LF +IND PT+ E ++
Sbjct: 87 MHRRDWLSLVAVHSDSWLLSVAFFFGAR--LNGNERKRLFSLINDHPTVLEALSDRKHGR 144
Query: 61 KDQSANHNSSKSKSSGKSRPAESQTKAVKMSPPPKDD 97
++S N SKS+ SGK R + QTK + P DD
Sbjct: 145 DNKSGADNGSKSRHSGK-RANDVQTKTSR--PAVVDD 178
>sp|O81488|ALFL4_ARATH PHD finger protein ALFIN-LIKE 4 OS=Arabidopsis thaliana GN=AL4 PE=1
SV=2
Length = 255
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/63 (79%), Positives = 55/63 (87%), Gaps = 1/63 (1%)
Query: 1 MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVVTGNA-KQ 59
M EKDWLSLVAVHSD+WLLAVAF+FGARFGF K +RK+LF M+NDLPTIFEVV G A KQ
Sbjct: 85 MAEKDWLSLVAVHSDAWLLAVAFFFGARFGFDKADRKRLFNMVNDLPTIFEVVAGTAKKQ 144
Query: 60 PKD 62
KD
Sbjct: 145 GKD 147
>sp|Q869L3|MDN1_DICDI Midasin OS=Dictyostelium discoideum GN=mdn1 PE=3 SV=2
Length = 5900
Score = 30.8 bits (68), Expect = 2.5, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Query: 53 VTGNAKQPKDQSANHNSSKSKSSGKSRPAESQT---KAVKMSPPPKDDDDSGMKKRKMMN 109
V+ ++ KD+S N+ + P+E+ T K +K PPP+ KK+K ++
Sbjct: 5318 VSNTDEEMKDESNQDNADDDSGMTQPTPSENDTGALKNLKSQPPPQSSAQQPPKKQKQVD 5377
Query: 110 RAP 112
P
Sbjct: 5378 PNP 5380
>sp|A5GF83|RIMP_GEOUR Ribosome maturation factor RimP OS=Geobacter uraniireducens (strain
Rf4) GN=rimP PE=3 SV=1
Length = 159
Score = 28.9 bits (63), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Query: 61 KDQSANHNSSKSKSSGKSRPAES-------QTKAVKM---SPPPKDDDDSGMKKRKMMNR 110
+D + H S + S G RP + + + VK+ P P DD+G K++ +
Sbjct: 68 EDVISEHYSLEVSSPGIDRPLKKVEDFQRFKGRLVKIRTFEPLP---DDAGNKRKTFLGE 124
Query: 111 APPVEHAGITMALTNSGSAAISVRNGSTANV 141
+E+ + +AL +AAI + AN+
Sbjct: 125 LKGIENGVVLVALKEGQNAAIPFEKVAKANL 155
>sp|Q8CI33|C19L1_MOUSE CWF19-like protein 1 OS=Mus musculus GN=Cwf19l1 PE=2 SV=2
Length = 537
Score = 28.9 bits (63), Expect = 9.7, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Query: 22 AFYFGARFGFGKNERKKLFQMINDLPTIFEVVTGNAKQPKDQSAN--HNSSKSKSSGKSR 79
A F A G E+KK + +P V KQP D + N +S K + GK
Sbjct: 220 ATRFIALANVGNPEKKKYLYAFSIVPMKLMAVAELVKQPPDVTENPYRDSGKQAAGGKHI 279
Query: 80 PAESQTKAVK 89
PA + A +
Sbjct: 280 PAPQEESACQ 289
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.124 0.354
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,531,716
Number of Sequences: 539616
Number of extensions: 1816511
Number of successful extensions: 6336
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 63
Number of HSP's that attempted gapping in prelim test: 6178
Number of HSP's gapped (non-prelim): 183
length of query: 141
length of database: 191,569,459
effective HSP length: 105
effective length of query: 36
effective length of database: 134,909,779
effective search space: 4856752044
effective search space used: 4856752044
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 55 (25.8 bits)