BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>032410
MDPRLCNVEEEVYEAHKNELEPTLAKRAEHYFTENRRVAKGLEAWKSGNSQDFGKLISAS
GSEPLIQLNEILQRAPGVFGARFSGAGFRGCCLALVDADRAEEAASYVRSEYFELQPELA
SQLNADSAVLICKPGDCARVI

High Scoring Gene Products

Symbol, full name Information P value
GalAK
AT3G10700
protein from Arabidopsis thaliana 3.7e-39
SO_0694
galactokinase
protein from Shewanella oneidensis MR-1 0.00018
galK
Galactokinase
protein from Vibrio cholerae O1 biovar El Tor str. N16961 0.00018
VC_1595
galactokinase
protein from Vibrio cholerae O1 biovar El Tor 0.00018
galK gene from Escherichia coli K-12 0.00029

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  032410
        (141 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2075730 - symbol:GalAK "galacturonic acid kina...   418  3.7e-39   1
TIGR_CMR|SO_0694 - symbol:SO_0694 "galactokinase" species...    99  0.00018   1
UNIPROTKB|Q9KRP1 - symbol:galK "Galactokinase" species:24...    99  0.00018   1
TIGR_CMR|VC_1595 - symbol:VC_1595 "galactokinase" species...    99  0.00018   1
UNIPROTKB|P0A6T3 - symbol:galK species:83333 "Escherichia...    97  0.00029   1


>TAIR|locus:2075730 [details] [associations]
            symbol:GalAK "galacturonic acid kinase" species:3702
            "Arabidopsis thaliana" [GO:0004335 "galactokinase activity"
            evidence=IEA;ISS;IDA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
            [GO:0005737 "cytoplasm" evidence=ISM;IEA] [GO:0006012 "galactose
            metabolic process" evidence=IEA] [GO:0008152 "metabolic process"
            evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
            [GO:0016773 "phosphotransferase activity, alcohol group as
            acceptor" evidence=IEA] [GO:0046835 "carbohydrate phosphorylation"
            evidence=IEA;IDA] [GO:0046396 "D-galacturonate metabolic process"
            evidence=IDA] [GO:0047912 "galacturonokinase activity"
            evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
            InterPro:IPR000705 InterPro:IPR006204 InterPro:IPR006206
            Pfam:PF00288 PIRSF:PIRSF000530 PRINTS:PR00473 PRINTS:PR00959
            PROSITE:PS00627 GO:GO:0005829 GO:GO:0005524 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0046872 EMBL:AC011560 EMBL:AC011708
            GO:GO:0006012 eggNOG:COG0153 Gene3D:3.30.230.10 InterPro:IPR020568
            InterPro:IPR014721 SUPFAM:SSF54211 InterPro:IPR013750 Pfam:PF08544
            KO:K00849 EMBL:FJ439676 EMBL:AY072103 EMBL:AY096732 IPI:IPI00522983
            RefSeq:NP_187681.2 UniGene:At.39881 HSSP:Q9R7D7
            ProteinModelPortal:Q8VYG2 SMR:Q8VYG2 STRING:Q8VYG2 PaxDb:Q8VYG2
            PRIDE:Q8VYG2 EnsemblPlants:AT3G10700.1 GeneID:820239
            KEGG:ath:AT3G10700 TAIR:At3g10700 HOGENOM:HOG000083795
            InParanoid:Q8VYG2 OMA:VRECHDA PhylomeDB:Q8VYG2 ProtClustDB:PLN02865
            Genevestigator:Q8VYG2 GO:GO:0047912 GO:GO:0046835 GO:GO:0046396
            Uniprot:Q8VYG2
        Length = 424

 Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
 Identities = 86/151 (56%), Positives = 103/151 (68%)

Query:     1 MDPRLCNVEEEVYEAHKNELEPTLAKRAEHYFTENRRVAKGLEAWKSGNSQDFGKLISAS 60
             ++P LCNVE  VYEAHK+EL+P LAKRAEHYF+EN RV KG EAW SGN ++FGKLISAS
Sbjct:   273 LEPTLCNVEHAVYEAHKHELKPVLAKRAEHYFSENMRVIKGREAWASGNLEEFGKLISAS 332

Query:    61 G----------SEPLIQLNEILQRAPXXXXXXXXXXXXXXCCLALVDADRAEEAASYVRS 110
             G          +EPLIQL +IL +AP              CCLA VDA++AE AASYV+ 
Sbjct:   333 GLSSIENYECGAEPLIQLYKILLKAPGVYGARFSGAGFRGCCLAFVDAEKAEAAASYVKD 392

Query:   111 EYFELQPELASQLNADSAVLICKPGDCARVI 141
             EY + QPE A+ LN    VLIC+ GD ARV+
Sbjct:   393 EYEKAQPEFANNLNGGKPVLICEAGDAARVL 423


>TIGR_CMR|SO_0694 [details] [associations]
            symbol:SO_0694 "galactokinase" species:211586 "Shewanella
            oneidensis MR-1" [GO:0004335 "galactokinase activity" evidence=ISS]
            [GO:0006012 "galactose metabolic process" evidence=ISS]
            InterPro:IPR000705 InterPro:IPR006203 InterPro:IPR006204
            InterPro:IPR006206 Pfam:PF00288 PIRSF:PIRSF000530 PRINTS:PR00473
            PRINTS:PR00959 PROSITE:PS00627 GO:GO:0005524 GO:GO:0005737
            EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0006012
            Gene3D:3.30.230.10 InterPro:IPR019539 InterPro:IPR020568
            InterPro:IPR014721 Pfam:PF10509 SUPFAM:SSF54211
            HOGENOM:HOG000241100 KO:K00849 GO:GO:0004335 TIGRFAMs:TIGR00131
            HSSP:Q9R7D7 RefSeq:NP_716327.1 ProteinModelPortal:Q8EIY3
            GeneID:1168554 KEGG:son:SO_0694 PATRIC:23521070 OMA:TENRRTQ
            ProtClustDB:CLSK905887 Uniprot:Q8EIY3
        Length = 381

 Score = 99 (39.9 bits), Expect = 0.00018, P = 0.00018
 Identities = 32/126 (25%), Positives = 51/126 (40%)

Query:    14 EAHKNELEPTLAKRAEHYFTENRRVAKGLEAWKSGNSQDFGKLISASGSE-------PLI 66
             E+ KN+L+ TL +RA+H  TEN+R      A +  N   F  L++ S           L 
Sbjct:   252 ESAKNKLDETLYRRAKHVVTENKRTQSAARALEQNNISKFSLLMAQSHQSLRDDFEVTLP 311

Query:    67 QLNEILQRAPXXXXXXXXXXXXXXCCLALVDADRAEEAASYVRSEYFELQPELASQLNAD 126
             + + ++                  C +ALVD +  +   S V   +FE       Q   D
Sbjct:   312 EFDTLVDIVSQVIGERGGIRMTDGCVVALVDHELTDAVVSAVEQAFFE-------QTGID 364

Query:   127 SAVLIC 132
             + V +C
Sbjct:   365 ATVYLC 370


>UNIPROTKB|Q9KRP1 [details] [associations]
            symbol:galK "Galactokinase" species:243277 "Vibrio cholerae
            O1 biovar El Tor str. N16961" [GO:0004335 "galactokinase activity"
            evidence=ISS] [GO:0006012 "galactose metabolic process"
            evidence=ISS] HAMAP:MF_00246 InterPro:IPR000705 InterPro:IPR006203
            InterPro:IPR006204 InterPro:IPR006206 InterPro:IPR022963
            Pfam:PF00288 PIRSF:PIRSF000530 PRINTS:PR00473 PRINTS:PR00959
            PROSITE:PS00627 UniPathway:UPA00214 GO:GO:0005524 GO:GO:0005737
            EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006012
            eggNOG:COG0153 Gene3D:3.30.230.10 InterPro:IPR019539
            InterPro:IPR020568 InterPro:IPR014721 Pfam:PF10509 SUPFAM:SSF54211
            InterPro:IPR013750 Pfam:PF08544 KO:K00849 OMA:MPCAINY
            ProtClustDB:PRK05101 GO:GO:0004335 InterPro:IPR019741
            TIGRFAMs:TIGR00131 PROSITE:PS00106 PIR:F82181 RefSeq:NP_231235.1
            ProteinModelPortal:Q9KRP1 DNASU:2613849 GeneID:2613849
            KEGG:vch:VC1595 PATRIC:20082245 Uniprot:Q9KRP1
        Length = 386

 Score = 99 (39.9 bits), Expect = 0.00018, P = 0.00018
 Identities = 20/46 (43%), Positives = 28/46 (60%)

Query:    15 AHKNELEPTLAKRAEHYFTENRRVAKGLEAWKSGNSQDFGKLISAS 60
             A + EL+P +AKRA H  TEN R     +A + GN    G+L++AS
Sbjct:   253 AKQAELDPVVAKRARHVITENERTLHAAQALREGNMPRLGELMAAS 298


>TIGR_CMR|VC_1595 [details] [associations]
            symbol:VC_1595 "galactokinase" species:686 "Vibrio cholerae
            O1 biovar El Tor" [GO:0004335 "galactokinase activity"
            evidence=ISS] [GO:0006012 "galactose metabolic process"
            evidence=ISS] HAMAP:MF_00246 InterPro:IPR000705 InterPro:IPR006203
            InterPro:IPR006204 InterPro:IPR006206 InterPro:IPR022963
            Pfam:PF00288 PIRSF:PIRSF000530 PRINTS:PR00473 PRINTS:PR00959
            PROSITE:PS00627 UniPathway:UPA00214 GO:GO:0005524 GO:GO:0005737
            EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006012
            eggNOG:COG0153 Gene3D:3.30.230.10 InterPro:IPR019539
            InterPro:IPR020568 InterPro:IPR014721 Pfam:PF10509 SUPFAM:SSF54211
            InterPro:IPR013750 Pfam:PF08544 KO:K00849 OMA:MPCAINY
            ProtClustDB:PRK05101 GO:GO:0004335 InterPro:IPR019741
            TIGRFAMs:TIGR00131 PROSITE:PS00106 PIR:F82181 RefSeq:NP_231235.1
            ProteinModelPortal:Q9KRP1 DNASU:2613849 GeneID:2613849
            KEGG:vch:VC1595 PATRIC:20082245 Uniprot:Q9KRP1
        Length = 386

 Score = 99 (39.9 bits), Expect = 0.00018, P = 0.00018
 Identities = 20/46 (43%), Positives = 28/46 (60%)

Query:    15 AHKNELEPTLAKRAEHYFTENRRVAKGLEAWKSGNSQDFGKLISAS 60
             A + EL+P +AKRA H  TEN R     +A + GN    G+L++AS
Sbjct:   253 AKQAELDPVVAKRARHVITENERTLHAAQALREGNMPRLGELMAAS 298


>UNIPROTKB|P0A6T3 [details] [associations]
            symbol:galK species:83333 "Escherichia coli K-12"
            [GO:0004335 "galactokinase activity" evidence=IEA;IMP;IDA]
            [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0033499 "galactose
            catabolic process via UDP-galactose" evidence=IMP] [GO:0046835
            "carbohydrate phosphorylation" evidence=IEA] [GO:0000287 "magnesium
            ion binding" evidence=IDA] [GO:0016310 "phosphorylation"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] HAMAP:MF_00246
            InterPro:IPR000705 InterPro:IPR006203 InterPro:IPR006204
            InterPro:IPR006206 InterPro:IPR022963 Pfam:PF00288
            PIRSF:PIRSF000530 PRINTS:PR00473 PRINTS:PR00959 PROSITE:PS00627
            UniPathway:UPA00214 GO:GO:0005524 GO:GO:0005737 GO:GO:0000287
            EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
            GenomeReviews:U00096_GR eggNOG:COG0153 Gene3D:3.30.230.10
            InterPro:IPR019539 InterPro:IPR020568 InterPro:IPR014721
            Pfam:PF10509 SUPFAM:SSF54211 InterPro:IPR013750 Pfam:PF08544
            GO:GO:0033499 EMBL:X02306 EMBL:U13636 PIR:B23044 RefSeq:NP_415278.1
            RefSeq:YP_489030.1 ProteinModelPortal:P0A6T3 SMR:P0A6T3
            PRIDE:P0A6T3 EnsemblBacteria:EBESCT00000001753
            EnsemblBacteria:EBESCT00000001754 EnsemblBacteria:EBESCT00000001755
            EnsemblBacteria:EBESCT00000016992 GeneID:12932717 GeneID:945358
            KEGG:ecj:Y75_p0730 KEGG:eco:b0757 PATRIC:32116715 EchoBASE:EB0358
            EcoGene:EG10363 HOGENOM:HOG000241100 KO:K00849 OMA:MPCAINY
            ProtClustDB:PRK05101 BioCyc:EcoCyc:GALACTOKIN-MONOMER
            BioCyc:ECOL316407:JW0740-MONOMER BioCyc:MetaCyc:GALACTOKIN-MONOMER
            SABIO-RK:P0A6T3 Genevestigator:P0A6T3 GO:GO:0004335
            InterPro:IPR019741 TIGRFAMs:TIGR00131 PROSITE:PS00106
            Uniprot:P0A6T3
        Length = 382

 Score = 97 (39.2 bits), Expect = 0.00029, P = 0.00029
 Identities = 21/58 (36%), Positives = 33/58 (56%)

Query:     3 PRLCNVEEEVYEAHKNELEPTLAKRAEHYFTENRRVAKGLEAWKSGNSQDFGKLISAS 60
             P L +V  E + A  +EL+P +AKR  H  TEN R  +   A + G+ +  G+L++ S
Sbjct:   240 PALRDVTIEEFNAVAHELDPIVAKRVRHILTENARTVEAASALEQGDLKRMGELMAES 297


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.131   0.379    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      141       127   0.00091  102 3  11 22  0.42    31
                                                     29  0.40    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  583 (62 KB)
  Total size of DFA:  134 KB (2084 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.20u 0.20s 12.40t   Elapsed:  00:00:01
  Total cpu time:  12.20u 0.20s 12.40t   Elapsed:  00:00:01
  Start:  Sat May 11 04:22:46 2013   End:  Sat May 11 04:22:47 2013

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