STRING 9.05 
  AT5G38650 protein (Arabidopsis thaliana) - STRING network view
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
AT5G38650
proteasome maturation factor UMP1 family protein; proteasome maturation factor UMP1 family protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- cellular_component unknown; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 15 growth stages; CONTAINS InterPro DOMAIN/s- Proteasome maturation factor UMP1 (InterPro-IPR008012); BEST Arabidopsis thaliana protein match is- proteasome maturation factor UMP1 family protein (TAIR-AT1G67250.1); Has 161 Blast hits to 161 proteins in 51 species- Archae - 0; Bacteria - 0; Metazoa - 87; Fungi - 0; [...] (141 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
AT1G77710
unknown protein; INVOLVED IN- biological_process unknown; LOCATED IN- cellular_component unknow [...] (93 aa)
       0.587
PBF1
PBF1; peptidase/ threonine-type endopeptidase; Encodes 20S proteasome beta subunit PBF1 (PBF1). [...] (223 aa)
     0.575
AT1G77370
glutaredoxin, putative; glutaredoxin, putative; FUNCTIONS IN- electron carrier activity, arsena [...] (130 aa)
       0.546
PBD1
PBD1 (20S PROTEASOME BETA SUBUNIT D1); peptidase/ threonine-type endopeptidase; Encodes 20S pro [...] (204 aa)
      0.528
MBF1A
MBF1A (MULTIPROTEIN BRIDGING FACTOR 1A); DNA binding / transcription coactivator; One of three [...] (142 aa)
       0.523
AT5G67600
unknown protein; unknown protein; LOCATED IN- plasma membrane; EXPRESSED IN- 22 plant structure [...] (82 aa)
       0.516
AT1G65820
microsomal glutathione s-transferase, putative; microsomal glutathione s-transferase, putative; [...] (194 aa)
      0.514
PMSR3
PMSR3 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 3); oxidoreductase, acting on sulfur group of dono [...] (202 aa)
       0.506
AT2G04900
unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- N-term [...] (128 aa)
       0.505
AT5G01350
unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (72 aa)
       0.497
 
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Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
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