BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032415
(141 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P49215|RS17_SOLLC 40S ribosomal protein S17 OS=Solanum lycopersicum GN=RPS17 PE=2
SV=3
Length = 144
Score = 228 bits (581), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 111/119 (93%), Positives = 117/119 (98%)
Query: 1 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
MGRVRTKTVKKSSRQVIERYYS+MTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR
Sbjct: 1 MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
Query: 61 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDQIEVDKETLDMLEALGMNEIPGLVR 119
IQKGPVRGISLKLQEEERERRMDFVPDESAIKTD IEVDKETLDML ALGM+++PG+V+
Sbjct: 61 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDLIEVDKETLDMLSALGMSDLPGVVK 119
>sp|Q9LZ17|RS174_ARATH 40S ribosomal protein S17-4 OS=Arabidopsis thaliana GN=RPS17D PE=2
SV=3
Length = 141
Score = 228 bits (581), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 114/135 (84%), Positives = 124/135 (91%), Gaps = 3/135 (2%)
Query: 1 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR
Sbjct: 1 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
Query: 61 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDQIEVDKETLDMLEALGMNEIPGLVRV 120
IQKGPVRGISLKLQEEERERRMDFVPDESAIKTD+I+VDKETL+ML +LGM++ PG+ V
Sbjct: 61 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLEMLASLGMSDTPGISAV 120
Query: 121 DP---VAPGVEFGRG 132
+P +AP FG G
Sbjct: 121 EPQQAMAPIAAFGGG 135
>sp|P49205|RS171_ARATH 40S ribosomal protein S17-1 OS=Arabidopsis thaliana GN=RPS17A PE=1
SV=3
Length = 141
Score = 224 bits (572), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 114/135 (84%), Positives = 123/135 (91%), Gaps = 3/135 (2%)
Query: 1 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR
Sbjct: 1 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
Query: 61 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDQIEVDKETLDMLEALGMNEIPGLVRV 120
IQKGPVRGISLKLQEEERERRMDFVPDESAIKTD+I+VDKETL+ML +LGM++ G+ V
Sbjct: 61 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLEMLASLGMSDTLGISAV 120
Query: 121 DP---VAPGVEFGRG 132
DP +AP FG G
Sbjct: 121 DPQQAMAPIPAFGGG 135
>sp|Q9SJ36|RS172_ARATH 40S ribosomal protein S17-2 OS=Arabidopsis thaliana GN=RPS17B PE=2
SV=3
Length = 140
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 112/133 (84%), Positives = 122/133 (91%), Gaps = 3/133 (2%)
Query: 1 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR
Sbjct: 1 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
Query: 61 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDQIEVDKETLDMLEALGMNEIPGLVRV 120
IQKGPVRGISLKLQEEERERRMDFVPDESAIKTD+I+VDKETL+ML +LGM++ G+ V
Sbjct: 61 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLEMLASLGMSDTSGISAV 120
Query: 121 DP---VAPGVEFG 130
+P +AP FG
Sbjct: 121 EPQQAMAPIAAFG 133
>sp|Q9SQZ1|RS173_ARATH 40S ribosomal protein S17-3 OS=Arabidopsis thaliana GN=RPS17C PE=2
SV=3
Length = 140
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 112/134 (83%), Positives = 123/134 (91%), Gaps = 4/134 (2%)
Query: 1 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR
Sbjct: 1 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
Query: 61 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDQIEVDKETLDMLEALGMNEIPGLVRV 120
IQKGPVRGISLKLQEEERERRMDFVPDESAIK D ++VDKETL+ML +LGM++I G+ +V
Sbjct: 61 IQKGPVRGISLKLQEEERERRMDFVPDESAIKIDDVKVDKETLEMLASLGMSDIAGISQV 120
Query: 121 D---PVAPGVEFGR 131
+ +AP V FGR
Sbjct: 121 ETQQAMAPAV-FGR 133
>sp|O42984|RS17A_SCHPO 40S ribosomal protein S17-A OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rps17a PE=3 SV=1
Length = 131
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/131 (64%), Positives = 108/131 (82%), Gaps = 2/131 (1%)
Query: 1 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
MGRVRTKT K++SR VIE+YY R+TLDF TNK+I++EVAII SKRLRNKIAG++THLMKR
Sbjct: 1 MGRVRTKTTKRASRVVIEKYYPRLTLDFQTNKRIVDEVAIIASKRLRNKIAGYTTHLMKR 60
Query: 61 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDQIEVDKETLDMLEALGMNEIPGLVRV 120
IQ+GPVRGIS KLQEEERER+ +VP+ S ++ D++ VD++T DML++LG ++IP VRV
Sbjct: 61 IQRGPVRGISFKLQEEERERKDQYVPEVSELEVDRVNVDQDTKDMLKSLGYDQIP--VRV 118
Query: 121 DPVAPGVEFGR 131
AP F R
Sbjct: 119 LAPAPQERFRR 129
>sp|Q9P7J6|RS17B_SCHPO 40S ribosomal protein S17-B OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rps17b PE=1 SV=1
Length = 132
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 81/118 (68%), Positives = 102/118 (86%)
Query: 1 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
MGRVRTKT K++SR VIE+YY R+TLDF TNK+I++EVAII SKRLRNKIAG++THLMKR
Sbjct: 1 MGRVRTKTTKRASRVVIEKYYPRLTLDFQTNKRIVDEVAIIASKRLRNKIAGYTTHLMKR 60
Query: 61 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDQIEVDKETLDMLEALGMNEIPGLV 118
IQ+GPVRGIS KLQEEERER+ +VP+ S ++ D+I VD++T DML+ALG + IP +V
Sbjct: 61 IQRGPVRGISFKLQEEERERKDQYVPEVSELEKDKINVDQDTKDMLKALGYDSIPTVV 118
>sp|Q962R2|RS17_SPOFR 40S ribosomal protein S17 OS=Spodoptera frugiperda GN=RpS17 PE=2
SV=3
Length = 133
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/138 (59%), Positives = 106/138 (76%), Gaps = 6/138 (4%)
Query: 1 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
MGRVRTKTVKK+++ +IE+YY+R+TLDF TNK+I EE+AIIP+K LRNKIAGF+THLM+R
Sbjct: 1 MGRVRTKTVKKAAKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 60
Query: 61 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDQIEVDKETLDMLEALGMNEIPGLVRV 120
++ VRGIS+KLQEEERERR ++VP+ SA++ D IEVD +T DML+ L N I GL
Sbjct: 61 LRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLT 120
Query: 121 DPVAPGVEFGRGGFAGAR 138
P +GG+ G R
Sbjct: 121 QPAT------QGGYGGRR 132
>sp|Q967G1|RS17_THEAN 40S ribosomal protein S17 OS=Theileria annulata GN=RPS17 PE=2 SV=3
Length = 131
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 76/117 (64%), Positives = 101/117 (86%), Gaps = 1/117 (0%)
Query: 1 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
MGRVRTKTVK+++RQ++E+YY ++ LDF NKK+ EEVA+IPSKR+RNK+AGF THLM+R
Sbjct: 1 MGRVRTKTVKRAARQIVEKYYGKLGLDFQYNKKVAEEVALIPSKRMRNKVAGFITHLMRR 60
Query: 61 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDQIEVDKETLDMLEALGMNEIPGL 117
IQKGPVRGISLKLQEEERERRMD++P++S ++ I+VD++T DML L ++ +P L
Sbjct: 61 IQKGPVRGISLKLQEEERERRMDYIPEKSELEVPVIQVDQDTADMLNFLKIS-LPNL 116
>sp|Q4MYY1|RS17_THEPA 40S ribosomal protein S17 OS=Theileria parva GN=RPS17 PE=3 SV=3
Length = 130
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 76/117 (64%), Positives = 101/117 (86%), Gaps = 1/117 (0%)
Query: 1 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
MGRVRTKTVK+++RQ++E+YY ++ LDF NKK+ EEVA+IPSKR+RNK+AGF THLM+R
Sbjct: 1 MGRVRTKTVKRAARQIVEKYYGKLGLDFQYNKKVAEEVALIPSKRMRNKVAGFITHLMRR 60
Query: 61 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDQIEVDKETLDMLEALGMNEIPGL 117
IQKGPVRGISLKLQEEERERRMD++P++S ++ I+VD++T DML L ++ +P L
Sbjct: 61 IQKGPVRGISLKLQEEERERRMDYIPEKSELEVPVIQVDQDTADMLNFLKIS-LPNL 116
>sp|P27770|RS17_NEUCR 40S ribosomal protein S17 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=rps-17
PE=3 SV=1
Length = 146
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/146 (59%), Positives = 109/146 (74%), Gaps = 8/146 (5%)
Query: 1 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
MGRVRTKTVKKS++ +IERYY ++TLDF TNK+I +E+AII SKRLRNKIAG++THLMKR
Sbjct: 1 MGRVRTKTVKKSAKVIIERYYPKLTLDFETNKRICDEIAIIASKRLRNKIAGYTTHLMKR 60
Query: 61 IQKGPVRGISLKLQEEERERRMDFVPDESAI------KTDQIEVDKETLDMLEALGMNEI 114
IQ+GPVRGIS KLQEEERER+ +VP+ SA+ ++ Q++VD ET D+L+ LG + I
Sbjct: 61 IQRGPVRGISFKLQEEERERKDQYVPEVSALDFTQNSESGQLDVDTETKDLLKHLGFDSI 120
Query: 115 PGLVRVDPVAPGVEFGRGGFAGARRR 140
P V V PV RG G R R
Sbjct: 121 P--VNVIPVTQAQPVERGRRFGDRPR 144
>sp|Q9U9L1|RS17_ANOGA 40S ribosomal protein S17 OS=Anopheles gambiae GN=RpS17 PE=2 SV=3
Length = 131
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 82/127 (64%), Positives = 106/127 (83%), Gaps = 3/127 (2%)
Query: 1 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
MGRVRTKT+KK+S+ +IE+YY+R+T+DF TNK+I+EEVAIIP+K LRNKIAGF THLMKR
Sbjct: 1 MGRVRTKTIKKASKVIIEKYYTRLTMDFDTNKRIVEEVAIIPTKPLRNKIAGFVTHLMKR 60
Query: 61 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDQIEVDKETLDMLEALGMNEIPGLVRV 120
++ VRGIS+KLQEEERERR ++VPD SA++ D IEVD ET +ML+ L N I +V++
Sbjct: 61 LRHSQVRGISIKLQEEERERRDNYVPDVSALEQDIIEVDPETKEMLKHLDFNNI--VVQL 118
Query: 121 -DPVAPG 126
+P APG
Sbjct: 119 TNPTAPG 125
>sp|A5PK63|RS17_BOVIN 40S ribosomal protein S17 OS=Bos taurus GN=RPS17 PE=2 SV=1
Length = 135
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 79/129 (61%), Positives = 102/129 (79%), Gaps = 1/129 (0%)
Query: 1 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
MGRVRTKTVKK++R +IE+YY+R+ DFHTNK++ EE+AIIPSK+LRNKIAG+ THLMKR
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLDNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKR 60
Query: 61 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDQIEVDKETLDMLEALGMNEIPGLVRV 120
IQ+GPVRGIS+KLQEEERERR ++VP+ SA+ + IEVD +T +ML+ L + L
Sbjct: 61 IQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVT 120
Query: 121 DPVAPGVEF 129
P G+ F
Sbjct: 121 QPTV-GMNF 128
>sp|Q6QAP7|RS17_PIG 40S ribosomal protein S17 OS=Sus scrofa GN=RPS17 PE=2 SV=3
Length = 135
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 79/129 (61%), Positives = 102/129 (79%), Gaps = 1/129 (0%)
Query: 1 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
MGRVRTKTVKK++R +IE+YY+R+ DFHTNK++ EE+AIIPSK+LRNKIAG+ THLMKR
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKR 60
Query: 61 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDQIEVDKETLDMLEALGMNEIPGLVRV 120
IQ+GPVRGIS+KLQEEERERR ++VP+ SA+ + IEVD +T +ML+ L + L
Sbjct: 61 IQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVT 120
Query: 121 DPVAPGVEF 129
P G+ F
Sbjct: 121 QPTV-GMNF 128
>sp|P63276|RS17_MOUSE 40S ribosomal protein S17 OS=Mus musculus GN=Rps17 PE=1 SV=2
Length = 135
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 79/129 (61%), Positives = 102/129 (79%), Gaps = 1/129 (0%)
Query: 1 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
MGRVRTKTVKK++R +IE+YY+R+ DFHTNK++ EE+AIIPSK+LRNKIAG+ THLMKR
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKR 60
Query: 61 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDQIEVDKETLDMLEALGMNEIPGLVRV 120
IQ+GPVRGIS+KLQEEERERR ++VP+ SA+ + IEVD +T +ML+ L + L
Sbjct: 61 IQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVT 120
Query: 121 DPVAPGVEF 129
P G+ F
Sbjct: 121 QPTV-GMNF 128
>sp|P63275|RS17_FELCA 40S ribosomal protein S17 OS=Felis catus GN=RPS17 PE=2 SV=2
Length = 135
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 79/129 (61%), Positives = 102/129 (79%), Gaps = 1/129 (0%)
Query: 1 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
MGRVRTKTVKK++R +IE+YY+R+ DFHTNK++ EE+AIIPSK+LRNKIAG+ THLMKR
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKR 60
Query: 61 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDQIEVDKETLDMLEALGMNEIPGLVRV 120
IQ+GPVRGIS+KLQEEERERR ++VP+ SA+ + IEVD +T +ML+ L + L
Sbjct: 61 IQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVT 120
Query: 121 DPVAPGVEF 129
P G+ F
Sbjct: 121 QPTV-GMNF 128
>sp|P63274|RS17_CRIGR 40S ribosomal protein S17 OS=Cricetulus griseus GN=RPS17 PE=2 SV=2
Length = 135
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 79/129 (61%), Positives = 102/129 (79%), Gaps = 1/129 (0%)
Query: 1 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
MGRVRTKTVKK++R +IE+YY+R+ DFHTNK++ EE+AIIPSK+LRNKIAG+ THLMKR
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKR 60
Query: 61 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDQIEVDKETLDMLEALGMNEIPGLVRV 120
IQ+GPVRGIS+KLQEEERERR ++VP+ SA+ + IEVD +T +ML+ L + L
Sbjct: 61 IQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVT 120
Query: 121 DPVAPGVEF 129
P G+ F
Sbjct: 121 QPTV-GMNF 128
>sp|P63273|RS17_CANFA 40S ribosomal protein S17 OS=Canis familiaris GN=RPS17 PE=2 SV=2
Length = 135
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 79/129 (61%), Positives = 102/129 (79%), Gaps = 1/129 (0%)
Query: 1 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
MGRVRTKTVKK++R +IE+YY+R+ DFHTNK++ EE+AIIPSK+LRNKIAG+ THLMKR
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKR 60
Query: 61 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDQIEVDKETLDMLEALGMNEIPGLVRV 120
IQ+GPVRGIS+KLQEEERERR ++VP+ SA+ + IEVD +T +ML+ L + L
Sbjct: 61 IQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVT 120
Query: 121 DPVAPGVEF 129
P G+ F
Sbjct: 121 QPTV-GMNF 128
>sp|Q7ZUB2|RS17_COTJA 40S ribosomal protein S17 OS=Coturnix coturnix japonica GN=RPS17
PE=2 SV=3
Length = 135
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 79/129 (61%), Positives = 102/129 (79%), Gaps = 1/129 (0%)
Query: 1 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
MGRVRTKTVKK++R +IE+YY+R+ DFHTNK++ EE+AIIPSK+LRNKIAG+ THLMKR
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKR 60
Query: 61 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDQIEVDKETLDMLEALGMNEIPGLVRV 120
IQ+GPVRGIS+KLQEEERERR ++VP+ SA+ + IEVD +T +ML+ L + L
Sbjct: 61 IQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVT 120
Query: 121 DPVAPGVEF 129
P G+ F
Sbjct: 121 QPTV-GMNF 128
>sp|P08636|RS17_CHICK 40S ribosomal protein S17 OS=Gallus gallus GN=RPS17 PE=2 SV=3
Length = 135
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 79/129 (61%), Positives = 102/129 (79%), Gaps = 1/129 (0%)
Query: 1 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
MGRVRTKTVKK++R +IE+YY+R+ DFHTNK++ EE+AIIPSK+LRNKIAG+ THLMKR
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKR 60
Query: 61 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDQIEVDKETLDMLEALGMNEIPGLVRV 120
IQ+GPVRGIS+KLQEEERERR ++VP+ SA+ + IEVD +T +ML+ L + L
Sbjct: 61 IQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVT 120
Query: 121 DPVAPGVEF 129
P G+ F
Sbjct: 121 QPTV-GMNF 128
>sp|Q90YQ6|RS17_ICTPU 40S ribosomal protein S17 OS=Ictalurus punctatus GN=rps17 PE=2 SV=3
Length = 134
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 79/129 (61%), Positives = 102/129 (79%), Gaps = 1/129 (0%)
Query: 1 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
MGRVRTKTVKK++R +IE+YY+R+ DFHTNK++ EE+AIIPSK+LRNKIAG+ THLMKR
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKR 60
Query: 61 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDQIEVDKETLDMLEALGMNEIPGLVRV 120
IQ+GPVRGIS+KLQEEERERR ++VP+ SA+ + IEVD +T +ML+ L + L
Sbjct: 61 IQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVT 120
Query: 121 DPVAPGVEF 129
P G+ F
Sbjct: 121 QPTV-GMNF 128
>sp|P08708|RS17_HUMAN 40S ribosomal protein S17 OS=Homo sapiens GN=RPS17 PE=1 SV=2
Length = 135
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 79/129 (61%), Positives = 102/129 (79%), Gaps = 1/129 (0%)
Query: 1 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
MGRVRTKTVKK++R +IE+YY+R+ DFHTNK++ EE+AIIPSK+LRNKIAG+ THLMKR
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKR 60
Query: 61 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDQIEVDKETLDMLEALGMNEIPGLVRV 120
IQ+GPVRGIS+KLQEEERERR ++VP+ SA+ + IEVD +T +ML+ L + L
Sbjct: 61 IQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVT 120
Query: 121 DPVAPGVEF 129
P G+ F
Sbjct: 121 QPTV-GMNF 128
>sp|P0CW22|RS17L_HUMAN 40S ribosomal protein S17-like OS=Homo sapiens GN=RPS17L PE=3 SV=1
Length = 135
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 79/129 (61%), Positives = 102/129 (79%), Gaps = 1/129 (0%)
Query: 1 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
MGRVRTKTVKK++R +IE+YY+R+ DFHTNK++ EE+AIIPSK+LRNKIAG+ THLMKR
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKR 60
Query: 61 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDQIEVDKETLDMLEALGMNEIPGLVRV 120
IQ+GPVRGIS+KLQEEERERR ++VP+ SA+ + IEVD +T +ML+ L + L
Sbjct: 61 IQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVT 120
Query: 121 DPVAPGVEF 129
P G+ F
Sbjct: 121 QPTV-GMNF 128
>sp|P04644|RS17_RAT 40S ribosomal protein S17 OS=Rattus norvegicus GN=Rps17 PE=1 SV=3
Length = 135
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/129 (61%), Positives = 101/129 (78%), Gaps = 1/129 (0%)
Query: 1 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
MGRVRTKTVKK++R +IE+YY+R+ DFHTNK++ EE+AIIPSK LRNKIAG+ THLMKR
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKNLRNKIAGYVTHLMKR 60
Query: 61 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDQIEVDKETLDMLEALGMNEIPGLVRV 120
IQ+GPVRGIS+KLQEEERERR ++VP+ SA+ + IEVD +T +ML+ L + L
Sbjct: 61 IQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVT 120
Query: 121 DPVAPGVEF 129
P G+ F
Sbjct: 121 QPTV-GMNF 128
>sp|P17704|RS17_DROME 40S ribosomal protein S17 OS=Drosophila melanogaster GN=RpS17 PE=2
SV=2
Length = 131
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/131 (61%), Positives = 101/131 (77%), Gaps = 2/131 (1%)
Query: 1 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
MGRVRTKTVKK+++ +IE+YY+R+TLDFHTNK+I EEVAIIP+K LRNKIAG+ THLM R
Sbjct: 1 MGRVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGR 60
Query: 61 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDQIEVDKETLDMLEALGMNEIPGLVRV 120
++ VRGIS+KLQEEERERR ++VP SA++ D IEVD +T +ML+ L + I GL
Sbjct: 61 LRHSQVRGISIKLQEEERERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLT 120
Query: 121 DPVAPGVEFGR 131
P FGR
Sbjct: 121 QPNTNN--FGR 129
>sp|P02407|RS17A_YEAST 40S ribosomal protein S17-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPS17A PE=1 SV=1
Length = 136
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 71/115 (61%), Positives = 95/115 (82%), Gaps = 4/115 (3%)
Query: 1 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
MGRVRTKTVK++S+ +IERYY ++TLDF TNK++ +E+A I SKRLRNKIAG++THLMKR
Sbjct: 1 MGRVRTKTVKRASKALIERYYPKLTLDFQTNKRLCDEIATIQSKRLRNKIAGYTTHLMKR 60
Query: 61 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDQ----IEVDKETLDMLEALGM 111
IQKGPVRGIS KLQEEERER+ +VP+ SA+ + + VD +T D++++LG+
Sbjct: 61 IQKGPVRGISFKLQEEERERKDQYVPEVSALDLSRSNGVLNVDNQTSDLVKSLGL 115
>sp|P14127|RS17B_YEAST 40S ribosomal protein S17-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPS17B PE=1 SV=1
Length = 136
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 71/115 (61%), Positives = 95/115 (82%), Gaps = 4/115 (3%)
Query: 1 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
MGRVRTKTVK++S+ +IERYY ++TLDF TNK++ +E+A I SKRLRNKIAG++THLMKR
Sbjct: 1 MGRVRTKTVKRASKALIERYYPKLTLDFQTNKRLCDEIATIQSKRLRNKIAGYTTHLMKR 60
Query: 61 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDQ----IEVDKETLDMLEALGM 111
IQKGPVRGIS KLQEEERER+ +VP+ SA+ + + VD +T D++++LG+
Sbjct: 61 IQKGPVRGISFKLQEEERERKDQYVPEVSALDLSRSNGVLNVDNQTSDLVKSLGL 115
>sp|O01692|RS17_CAEEL 40S ribosomal protein S17 OS=Caenorhabditis elegans GN=rps-17 PE=3
SV=2
Length = 130
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 74/115 (64%), Positives = 94/115 (81%), Gaps = 3/115 (2%)
Query: 1 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
M RVRTKTVKK+SR +IE+YY+RMT DFH NK++ +EVAII SK LRNKIAG+ THLM+R
Sbjct: 1 MSRVRTKTVKKASRVLIEKYYTRMTNDFHNNKRVCDEVAIIGSKPLRNKIAGYITHLMRR 60
Query: 61 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDQ---IEVDKETLDMLEALGMN 112
I++GPVRGIS+KLQEEERERR +++P+ S + Q I+VD +T DML+A G N
Sbjct: 61 IERGPVRGISIKLQEEERERRDNYMPEISTVDPSQLTSIKVDTDTSDMLKAAGFN 115
>sp|P42520|RS17_DICDI 40S ribosomal protein S17 OS=Dictyostelium discoideum GN=rps17 PE=3
SV=2
Length = 135
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 72/122 (59%), Positives = 99/122 (81%), Gaps = 1/122 (0%)
Query: 1 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
MGRVRTKT+K++S+ +IE++Y R+T DF TNK+ +++A IPSKRLRNKIAGF THLM+R
Sbjct: 1 MGRVRTKTIKRASKLLIEKHYPRLTNDFDTNKRTCDKLAKIPSKRLRNKIAGFCTHLMRR 60
Query: 61 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDQIEVDKETLDMLEA-LGMNEIPGLVR 119
I GPVRGIS KLQEEERE+R ++VP ESAIKT+++++D++ +ML++ L IP +
Sbjct: 61 IANGPVRGISYKLQEEEREKRDNYVPQESAIKTNEVKIDRDVEEMLKSTLEFPTIPQIHV 120
Query: 120 VD 121
VD
Sbjct: 121 VD 122
>sp|Q8SSF9|RS17_ENCCU 40S ribosomal protein S17 OS=Encephalitozoon cuniculi (strain
GB-M1) GN=RPS17 PE=1 SV=1
Length = 120
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 74/110 (67%)
Query: 1 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
MG VR K VK+++R + E+Y+ R+ F N ++++VA++ SK+L+N+IAG+ T L K+
Sbjct: 1 MGCVRNKIVKRAARTIAEKYFQRLDSTFDHNLLVVQDVAVVQSKKLKNEIAGYLTSLYKK 60
Query: 61 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDQIEVDKETLDMLEALG 110
I KG + +K EEERER+ + +P ES + D +EVD T++M++ G
Sbjct: 61 ILKGTYNKVYIKSHEEERERKENVIPKESMLDVDCVEVDDVTMEMIKRYG 110
>sp|P54026|RS17E_METJA 30S ribosomal protein S17e OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 /
NBRC 100440) GN=rps17e PE=3 SV=2
Length = 62
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 48/62 (77%)
Query: 1 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
MGR+R +K+++ ++I++Y T DF TNK++LEEVA I +KRLRN+IAG+ TH M++
Sbjct: 1 MGRIRQTLIKRTAMELIKKYRDLFTTDFETNKRVLEEVAQISTKRLRNRIAGYITHKMRQ 60
Query: 61 IQ 62
+Q
Sbjct: 61 LQ 62
>sp|A6UVG8|RS17E_META3 30S ribosomal protein S17e OS=Methanococcus aeolicus (strain
Nankai-3 / ATCC BAA-1280) GN=rps17e PE=3 SV=1
Length = 63
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 46/61 (75%)
Query: 1 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
MGR+R +K++ ++E+Y R+T DF TNKK+++EVA I +KRLRN++AG+ T MK+
Sbjct: 1 MGRIRQTFIKRAGEDLVEKYEDRLTTDFETNKKVIDEVAEIATKRLRNRVAGYVTKKMKK 60
Query: 61 I 61
+
Sbjct: 61 V 61
>sp|Q8TUZ3|RS17E_METKA 30S ribosomal protein S17e OS=Methanopyrus kandleri (strain AV19
/ DSM 6324 / JCM 9639 / NBRC 100938) GN=rps17e PE=3
SV=1
Length = 70
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 43/59 (72%)
Query: 1 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMK 59
MG+VR VK+ +R+++E+Y +T DF NKK++E VA +K+LRN IAG+ THLM+
Sbjct: 1 MGKVRPTFVKRPAREIVEKYEEYLTTDFEHNKKVVEIVARPKTKKLRNMIAGYVTHLMR 59
>sp|A3DMZ6|RS17E_STAMF 30S ribosomal protein S17e OS=Staphylothermus marinus (strain
ATCC 43588 / DSM 3639 / F1) GN=rps17e PE=3 SV=1
Length = 68
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 50/74 (67%), Gaps = 9/74 (12%)
Query: 1 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
MG+VRTK VK+++R+++E+Y + T DF NKK++ ++ SK+LRN+IAG+ THL+
Sbjct: 1 MGKVRTKIVKRTARELLEKYPNLFTRDFEHNKKVVSKLIETKSKKLRNQIAGYITHLV-- 58
Query: 61 IQKGPVRGISLKLQ 74
GI LK Q
Sbjct: 59 -------GIKLKRQ 65
>sp|A9A655|RS17E_METM6 30S ribosomal protein S17e OS=Methanococcus maripaludis (strain
C6 / ATCC BAA-1332) GN=rps17e PE=3 SV=1
Length = 63
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 44/62 (70%)
Query: 1 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
MGR+R +K++ ++IE++ + T DF NKK +EEVA+I +K LRN+IAG+ T +K+
Sbjct: 1 MGRIRQTFIKRTGEELIEKFADKFTSDFEENKKAVEEVAMISTKTLRNRIAGYVTAKVKK 60
Query: 61 IQ 62
+
Sbjct: 61 MN 62
>sp|A6VJN0|RS17E_METM7 30S ribosomal protein S17e OS=Methanococcus maripaludis (strain
C7 / ATCC BAA-1331) GN=rps17e PE=3 SV=1
Length = 63
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 44/62 (70%)
Query: 1 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
MGR+R +K++ ++IE++ + T DF NKK +EEVA+I +K LRN++AG+ T +K+
Sbjct: 1 MGRIRQTFIKRTGEELIEKFADKFTSDFEENKKAVEEVAMISTKTLRNRVAGYVTAKVKK 60
Query: 61 IQ 62
+
Sbjct: 61 MN 62
>sp|A4FYQ2|RS17E_METM5 30S ribosomal protein S17e OS=Methanococcus maripaludis (strain
C5 / ATCC BAA-1333) GN=rps17e PE=3 SV=1
Length = 63
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 44/62 (70%)
Query: 1 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
MGR+R +K++ ++IE++ + T DF NKK +EEVA+I +K LRN++AG+ T +K+
Sbjct: 1 MGRIRQTFIKRTGEELIEKFADKFTSDFEENKKAVEEVAMISTKTLRNRVAGYVTAKVKK 60
Query: 61 IQ 62
+
Sbjct: 61 MN 62
>sp|Q6LZP7|RS17E_METMP 30S ribosomal protein S17e OS=Methanococcus maripaludis (strain
S2 / LL) GN=rps17e PE=3 SV=1
Length = 63
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 44/62 (70%)
Query: 1 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
MGR+R +K++ ++IE++ + T DF NKK +EEVA+I +K LRN+IAG+ T +K+
Sbjct: 1 MGRIRQTFIKRTGEELIEKFADKFTSDFEENKKAVEEVAMISTKPLRNRIAGYVTAKVKK 60
Query: 61 IQ 62
+
Sbjct: 61 MN 62
>sp|A1RTI5|RS17E_PYRIL 30S ribosomal protein S17e OS=Pyrobaculum islandicum (strain DSM
4184 / JCM 9189) GN=rps17e PE=3 SV=1
Length = 71
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 44/62 (70%)
Query: 1 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
MGRV+ K +K +R+++E Y + T F NKK + ++A IPSK +RNK+AG+ T L+KR
Sbjct: 1 MGRVKPKYIKSLARRLLETYPDKFTDSFEENKKAVAQLADIPSKTVRNKVAGYITRLVKR 60
Query: 61 IQ 62
++
Sbjct: 61 LK 62
>sp|A4WH03|RS17E_PYRAR 30S ribosomal protein S17e OS=Pyrobaculum arsenaticum (strain DSM
13514 / JCM 11321) GN=rps17e PE=3 SV=1
Length = 71
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 41/60 (68%)
Query: 1 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
MGRV+ K +K + +++E Y R T F NKK + E+A IPSK +RNK+AG+ T L+KR
Sbjct: 1 MGRVKPKYIKSLAEKLLETYPDRFTDSFEENKKAVAELAEIPSKTVRNKVAGYITRLIKR 60
>sp|A3MS42|RS17E_PYRCJ 30S ribosomal protein S17e OS=Pyrobaculum calidifontis (strain
JCM 11548 / VA1) GN=rps17e PE=3 SV=1
Length = 71
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 41/60 (68%)
Query: 1 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
MGRV+ K +K + +++E Y R T F NKK + E+A IPSK +RNK+AG+ T L+KR
Sbjct: 1 MGRVKPKFIKSLAEKLLEAYPDRFTESFKENKKAVAELADIPSKTVRNKVAGYITRLVKR 60
>sp|A6US72|RS17E_METVS 30S ribosomal protein S17e OS=Methanococcus vannielii (strain SB
/ ATCC 35089 / DSM 1224) GN=rps17e PE=3 SV=1
Length = 63
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 43/62 (69%)
Query: 1 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
MGR+R +K++ ++IE++ + T DF NKK +EEVA I +K LRN+IAG+ T +K+
Sbjct: 1 MGRIRQTFIKRTGEELIEKFAGKFTSDFEANKKAVEEVARISTKTLRNRIAGYITAKVKK 60
Query: 61 IQ 62
+
Sbjct: 61 MN 62
>sp|Q2NHW6|RS17E_METST 30S ribosomal protein S17e OS=Methanosphaera stadtmanae (strain
DSM 3091) GN=rps17e PE=3 SV=1
Length = 60
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 44/60 (73%)
Query: 1 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
MG +RT VK+++++++E + + DF NK+++ E + + +K LRN+IAG++THL+++
Sbjct: 1 MGNIRTTFVKRTAKELLELHGDKFNSDFENNKQVVAEYSTVSTKHLRNQIAGYATHLLEQ 60
>sp|Q8ZYF4|RS17E_PYRAE 30S ribosomal protein S17e OS=Pyrobaculum aerophilum (strain ATCC
51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827)
GN=rps17e PE=3 SV=1
Length = 71
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 41/60 (68%)
Query: 1 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
MGRVR + +K +++E Y + T +F NKK + E+A IPSK +RNK+AG+ T L+KR
Sbjct: 1 MGRVRPRYIKSLGEKLLEMYPDKFTDNFEENKKAVAELADIPSKTVRNKVAGYITRLVKR 60
>sp|B1YA34|RS17E_PYRNV 30S ribosomal protein S17e OS=Pyrobaculum neutrophilum (strain
DSM 2338 / JCM 9278 / V24Sta) GN=rps17e PE=3 SV=1
Length = 71
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 41/60 (68%)
Query: 1 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
MGRVR + +K +++E Y R T F NKK + ++A IPSKR+RN++AG+ T L+KR
Sbjct: 1 MGRVRPRYIKSLGDKLLEMYPDRFTDSFEENKKAVAQLADIPSKRVRNRVAGYITRLVKR 60
>sp|O26894|RS17E_METTH 30S ribosomal protein S17e OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=rps17e PE=1 SV=1
Length = 62
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 43/60 (71%)
Query: 1 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
MG +RT VK+ ++++IE + + T DF TNKK++EE + + +K LRNKIAG+ T ++ +
Sbjct: 1 MGNIRTSFVKRIAKEMIETHPGKFTDDFDTNKKLVEEFSTVSTKHLRNKIAGYITRIISQ 60
>sp|A8A954|RS17E_IGNH4 30S ribosomal protein S17e OS=Ignicoccus hospitalis (strain
KIN4/I / DSM 18386 / JCM 14125) GN=rps17e PE=3 SV=1
Length = 74
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 42/59 (71%)
Query: 1 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMK 59
MG+VR VK+++R++++ Y T DF NKK++ ++ + SK+LRN+IAG+ THL K
Sbjct: 1 MGKVRINVVKRTARKLLQMYPDLFTRDFEHNKKVVSQLIEVNSKKLRNQIAGYITHLKK 59
>sp|Q9YA67|RS17E_AERPE 30S ribosomal protein S17e OS=Aeropyrum pernix (strain ATCC
700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
GN=rps17e PE=3 SV=1
Length = 74
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 43/58 (74%)
Query: 1 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLM 58
MG+VR + VK+++R+++E+Y T DF NK+++ ++ SK+LRN+IAG+ THL+
Sbjct: 1 MGKVRIRLVKRTARKLLEKYPDLFTGDFEHNKRVVSQLIEYRSKKLRNQIAGYITHLV 58
>sp|C6A4W3|RS17E_THESM 30S ribosomal protein S17e OS=Thermococcus sibiricus (strain MM
739 / DSM 12597) GN=rps17e PE=3 SV=1
Length = 67
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 45/66 (68%)
Query: 1 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
MG ++ +K+++R++ +RY + T DF NKK +EE+ I SK +RN+IAG+ T L++
Sbjct: 1 MGNIKQGFIKRTARELFDRYPNEFTRDFEHNKKKVEELTNITSKTMRNRIAGYVTRLVRL 60
Query: 61 IQKGPV 66
++G +
Sbjct: 61 KEEGKI 66
>sp|Q5JDC7|RS17E_PYRKO 30S ribosomal protein S17e OS=Pyrococcus kodakaraensis (strain
ATCC BAA-918 / JCM 12380 / KOD1) GN=rps17e PE=3 SV=1
Length = 67
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 45/66 (68%)
Query: 1 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
MG ++ +K+++R++ +RY + T DF NKK++ E+ + SK +RN+IAG+ T L++
Sbjct: 1 MGNIKQTFIKRTARELFDRYPDKFTRDFEHNKKMVAELTNVTSKTIRNRIAGYITRLVRM 60
Query: 61 IQKGPV 66
++G +
Sbjct: 61 KEEGKI 66
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.138 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,641,504
Number of Sequences: 539616
Number of extensions: 1887077
Number of successful extensions: 5840
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 5740
Number of HSP's gapped (non-prelim): 117
length of query: 141
length of database: 191,569,459
effective HSP length: 105
effective length of query: 36
effective length of database: 134,909,779
effective search space: 4856752044
effective search space used: 4856752044
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)