BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>032416
MGNTIGGRRKAKVMKIDGETIKLKTPIQASEVVKDYPGYVLLDSEAVKHFGIRAKPLEPR
QQLKPKKVYFLVELPKLPDEEKITRRVRSGIQMSAKDRLECLMLSRRAVSDLTAVNVRSS
HGSEVAPGTGDGSDEGQNEAA

High Scoring Gene Products

Symbol, full name Information P value
AT1G66480 protein from Arabidopsis thaliana 3.9e-37
AT1G71015 protein from Arabidopsis thaliana 1.5e-33
At17.1
AT2G01340
protein from Arabidopsis thaliana 2.0e-33
AT5G37840 protein from Arabidopsis thaliana 4.2e-31
AT3G61920 protein from Arabidopsis thaliana 0.00058

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  032416
        (141 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2028942 - symbol:AT1G66480 "AT1G66480" species...   399  3.9e-37   1
TAIR|locus:504956263 - symbol:AT1G71015 "AT1G71015" speci...   365  1.5e-33   1
TAIR|locus:2038776 - symbol:At17.1 "AT2G01340" species:37...   364  2.0e-33   1
TAIR|locus:2156035 - symbol:AT5G37840 "AT5G37840" species...   342  4.2e-31   1
TAIR|locus:2079572 - symbol:AT3G61920 "AT3G61920" species...    97  0.00058   1


>TAIR|locus:2028942 [details] [associations]
            symbol:AT1G66480 "AT1G66480" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005886
            "plasma membrane" evidence=IDA] [GO:0009693 "ethylene biosynthetic
            process" evidence=RCA] EMBL:CP002684 GenomeReviews:CT485782_GR
            GO:GO:0005886 EMBL:AC074025 EMBL:BT011775 EMBL:BT012406
            EMBL:AK227786 IPI:IPI00546055 IPI:IPI00867963 RefSeq:NP_176821.2
            UniGene:At.17486 IntAct:Q6NLC8 STRING:Q6NLC8
            EnsemblPlants:AT1G66480.1 GeneID:842966 KEGG:ath:AT1G66480
            TAIR:At1g66480 eggNOG:NOG275238 HOGENOM:HOG000242814
            InParanoid:Q6NLC8 OMA:PERPPGI PhylomeDB:Q6NLC8
            ProtClustDB:CLSN2686948 Genevestigator:Q6NLC8 InterPro:IPR025322
            Pfam:PF14009 Uniprot:Q6NLC8
        Length = 225

 Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
 Identities = 88/141 (62%), Positives = 101/141 (71%)

Query:     1 MGNTIGGRRK-AKVMKIDGETIKLKTPIQASEVVKDYPGYVLLDSEAVKHFGIRAKPLEP 59
             MGN+I  +RK AKVMKIDGET ++KTP+ A EV  DYPGYVLLDS+AVKHFG+R+KPLEP
Sbjct:     1 MGNSITVKRKRAKVMKIDGETFRIKTPVTAREVTADYPGYVLLDSQAVKHFGVRSKPLEP 60

Query:    60 RQQLKPKKVYFLVELPKLPDE-------EKIT-RRVRSGIQMSAKDRLECLMLSRRAVSD 111
              Q LKPKK YFLVELPKLP E        K+  RRV SGI + AK+RL+ LMLSRR VSD
Sbjct:    61 NQTLKPKKTYFLVELPKLPPETTAVDTENKLPYRRVMSGIHVGAKERLDMLMLSRRTVSD 120

Query:   112 LTAVNVRSSHGSEVAPGTGDG 132
             +T    RS  G    P  G G
Sbjct:   121 VTIG--RSDGGDGFGPELGPG 139


>TAIR|locus:504956263 [details] [associations]
            symbol:AT1G71015 "AT1G71015" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC008148
            HOGENOM:HOG000242814 InterPro:IPR025322 Pfam:PF14009 EMBL:BT012172
            EMBL:AK220761 EMBL:AK220604 IPI:IPI00529764 RefSeq:NP_683488.1
            UniGene:At.45168 EnsemblPlants:AT1G71015.1 GeneID:843441
            KEGG:ath:AT1G71015 TAIR:At1g71015 eggNOG:NOG316483
            InParanoid:Q9SSJ7 OMA:RSGIQMS PhylomeDB:Q9SSJ7
            ProtClustDB:CLSN2917910 Genevestigator:Q9SSJ7 Uniprot:Q9SSJ7
        Length = 195

 Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
 Identities = 72/124 (58%), Positives = 97/124 (78%)

Query:     1 MGNTIGGRRKAKVMKIDGETIKLKTPIQASEVVKDYPGYVLLDSEAVKHFGIRAKPLEPR 60
             MGN++G ++ A +M I+GE+ KLKTP++A  VVKD+PG+VLL+SEAVK  GIRAKPLEP 
Sbjct:     1 MGNSLGTKKTATIMNINGESFKLKTPVEAGTVVKDFPGHVLLESEAVKRLGIRAKPLEPH 60

Query:    61 QQLKPKKVYFLVELPKLPDEEKITRRVRSGIQMSAKDRLECLMLSRRAVSDLTAVNVRSS 120
             Q L+ K++YF+VELP+   +E+  RRVRSGIQMSAK+RLE L LSRR+ SDL+ +  ++ 
Sbjct:    61 QNLESKRIYFMVELPRTW-KERTPRRVRSGIQMSAKERLENLKLSRRSSSDLSVMKKKTE 119

Query:   121 HGSE 124
                E
Sbjct:   120 VNDE 123


>TAIR|locus:2038776 [details] [associations]
            symbol:At17.1 "AT2G01340" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005886
            "plasma membrane" evidence=IDA] [GO:0009624 "response to nematode"
            evidence=IEP] GO:GO:0005886 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0009624 HOGENOM:HOG000242814 InterPro:IPR025322 Pfam:PF14009
            EMBL:BT021987 EMBL:BT025275 EMBL:AK226497 IPI:IPI00516747
            RefSeq:NP_178243.2 UniGene:At.13541 UniGene:At.63381
            UniGene:At.70733 EnsemblPlants:AT2G01340.1 GeneID:814662
            KEGG:ath:AT2G01340 TAIR:At2g01340 eggNOG:NOG327687
            InParanoid:Q52K81 OMA:HYGARAK PhylomeDB:Q52K81
            ProtClustDB:CLSN2917975 Genevestigator:Q52K81 Uniprot:Q52K81
        Length = 215

 Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
 Identities = 72/113 (63%), Positives = 94/113 (83%)

Query:     1 MGNTIGGRRKAKVMKIDGETIKLKTPIQASEVVKDYPGYVLLDSEAVKHFGIRAKPLEPR 60
             MGN++GG++  KVMKIDGET KLKTP+ A EV+KD+PG+VLLDSE+VKH+G RAKPLE +
Sbjct:     1 MGNSLGGKKTTKVMKIDGETFKLKTPVTAEEVLKDFPGHVLLDSESVKHYGARAKPLEAK 60

Query:    61 QQLKPKKVYFLVELPKLPDEEKITRRVRSGIQMSAKDRLECLMLSRRAVSDLT 113
             Q+L+ K++YF+VE    P +E   RRVRSGI +SAK+RLE LML+RR+ SDL+
Sbjct:    61 QRLEAKRLYFVVE----PVKECPPRRVRSGIHVSAKERLESLMLARRSSSDLS 109


>TAIR|locus:2156035 [details] [associations]
            symbol:AT5G37840 "AT5G37840" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002688 GenomeReviews:BA000015_GR
            ProtClustDB:CLSN2686948 InterPro:IPR025322 Pfam:PF14009
            EMBL:BT012530 EMBL:BT014829 IPI:IPI00521938 RefSeq:NP_198600.1
            UniGene:At.30460 PRIDE:Q6NL13 EnsemblPlants:AT5G37840.1
            GeneID:833762 KEGG:ath:AT5G37840 TAIR:At5g37840 eggNOG:NOG273176
            InParanoid:Q6NL13 OMA:CVARDQG PhylomeDB:Q6NL13
            Genevestigator:Q6NL13 Uniprot:Q6NL13
        Length = 214

 Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
 Identities = 73/117 (62%), Positives = 86/117 (73%)

Query:     1 MGNTIGGRR-KAKVMKIDGETIKLKTPIQASEVVKDYPGYVLLDSEAVKHFGIRAKPLEP 59
             MGNTI  RR K KVMKIDG+  +LKTP+ AS+  K+YPG+VLLDSE VK  G+RAKPLEP
Sbjct:     1 MGNTIMVRRNKVKVMKIDGDIFRLKTPVTASDATKEYPGFVLLDSETVKRLGVRAKPLEP 60

Query:    60 RQQLKPKKVYFLVELPKLPDEEKIT-RRVRSG-IQMSAKDRLECLMLSRRAVSDLTA 114
              Q LKP   YFLV+LP +    K+  RRV SG I + AK+RLE LMLSRR VSD+ A
Sbjct:    61 NQILKPNHTYFLVDLPPVDKRNKLPYRRVMSGNIHVGAKERLEMLMLSRRTVSDVGA 117


>TAIR|locus:2079572 [details] [associations]
            symbol:AT3G61920 "AT3G61920" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] EMBL:CP002686 GenomeReviews:BA000014_GR
            EMBL:AL138642 InterPro:IPR025322 Pfam:PF14009 EMBL:AY062598
            EMBL:BT006567 IPI:IPI00532852 PIR:T47984 RefSeq:NP_191751.1
            UniGene:At.27290 IntAct:Q9M273 EnsemblPlants:AT3G61920.1
            GeneID:825365 KEGG:ath:AT3G61920 TAIR:At3g61920 eggNOG:NOG307574
            HOGENOM:HOG000090453 InParanoid:Q9M273 OMA:EFITNEF PhylomeDB:Q9M273
            ProtClustDB:CLSN2679328 Genevestigator:Q9M273 Uniprot:Q9M273
        Length = 187

 Score = 97 (39.2 bits), Expect = 0.00058, P = 0.00058
 Identities = 34/111 (30%), Positives = 56/111 (50%)

Query:     1 MGNTI----GGRRKA--------KVMKIDGETIKLKTPIQASEVVKDYPGYVLLDSEAVK 48
             MGN +    GG RK         KV+  +G  ++L  PI A  +  ++PG+V+ DS +++
Sbjct:     1 MGNCVFKGNGGSRKLYDKDDSLIKVVTPNGGVMELHPPIFAEFITNEFPGHVIHDSLSLR 60

Query:    49 HFGIRAKPLEPRQQLKPKKVYFLVELPKLPDEEKITRRVRSGIQMSAKDRL 99
             H    + PL   ++L P  +Y+L  LP L      T ++ S  Q+S   R+
Sbjct:    61 H---SSPPLLHGEELFPGNIYYL--LP-LSSSAAATAQLDSSDQLSTPYRM 105


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.313   0.133   0.366    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      141       141   0.00091  102 3  11 23  0.36    32
                                                     30  0.47    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  514 (55 KB)
  Total size of DFA:  109 KB (2075 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.73u 0.14s 13.87t   Elapsed:  00:00:00
  Total cpu time:  13.73u 0.14s 13.87t   Elapsed:  00:00:00
  Start:  Sat May 11 04:30:42 2013   End:  Sat May 11 04:30:42 2013

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