BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032423
(141 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7XUR3|FUCO1_ORYSJ Putative alpha-L-fucosidase 1 OS=Oryza sativa subsp. japonica
GN=Os04g0560400 PE=3 SV=2
Length = 517
Score = 137 bits (346), Expect = 1e-32, Method: Composition-based stats.
Identities = 59/128 (46%), Positives = 89/128 (69%), Gaps = 1/128 (0%)
Query: 1 MKEDIYTYWAPEENHSDWTLLINLQEPVSFNVLQVQEPIHMGQRISRFHLDILNEERKWK 60
++E IY+YWAPEE S W +L +L + SFNV+Q+QEPI MGQR+ +F ++IL +E W+
Sbjct: 375 LQESIYSYWAPEEGQSSWEMLFDLGQSASFNVIQLQEPIQMGQRVIKFRVEILVDEL-WQ 433
Query: 61 KVINGTTVGYQRLLQFPTVKSQQLRFVIDKSRAEPLISHLGIYMDKFSTVSSMSDSTSQT 120
++ GTT+GY+RL QFP V+ Q L+ ID +RA+PLIS G++ D FS S+ + +
Sbjct: 434 TIVEGTTIGYKRLFQFPVVEGQFLKLSIDGARADPLISFFGVFTDSFSVTYSLENHEKPS 493
Query: 121 SLNGSHIL 128
+N S ++
Sbjct: 494 VVNSSEVI 501
>sp|Q8GW72|FUCO1_ARATH Alpha-L-fucosidase 1 OS=Arabidopsis thaliana GN=FUC1 PE=1 SV=2
Length = 506
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 59/113 (52%), Positives = 87/113 (76%), Gaps = 2/113 (1%)
Query: 1 MKEDIYTYWAPEENHSDWTLLINLQEPVSFNVLQVQEPIHMGQRISRFHLDILNE-ERKW 59
++E + YWAPEEN ++W L + ++ VSFNVL+++EPIHMGQRI+ FHL+ +W
Sbjct: 373 LEEGLDKYWAPEENQNEWVLYLEFKDLVSFNVLEIREPIHMGQRIASFHLETRKTGSGEW 432
Query: 60 KKVINGTTVGYQRLLQF-PTVKSQQLRFVIDKSRAEPLISHLGIYMDKFSTVS 111
++V++GTTVG +RLL+F V+S+ L+ V+DK+R +PLIS+LG+YMDKFS S
Sbjct: 433 ERVVSGTTVGNKRLLRFLNVVESRSLKLVVDKARTDPLISYLGLYMDKFSGSS 485
>sp|Q54F23|HTR7A_DICDI HEAT repeat-containing protein 7A homolog OS=Dictyostelium discoideum
GN=heatr7a PE=4 SV=1
Length = 1647
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 61 KVINGTTVGYQRLLQFPTVKSQQLRFVIDKSRAEPLISHLGIYMDKFSTVSSMSDSTSQT 120
K + G+ G Q L F T S + + K+R E LI ++ I + T +M TS+T
Sbjct: 1063 KFLEGSIKGLQDLQAFSTNGSCIIINGLIKTRGEELIEYVPILVKGLLT--AMEGITSET 1120
Query: 121 SLNGSHILQKSMSNHSEIAAI 141
++NG+ + +S++NH I +
Sbjct: 1121 TMNGTLVSLRSLANHHLIPVL 1141
>sp|Q7N8V5|SURA_PHOLL Chaperone SurA OS=Photorhabdus luminescens subsp. laumondii (strain
TT01) GN=surA PE=3 SV=1
Length = 433
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/71 (22%), Positives = 39/71 (54%)
Query: 61 KVINGTTVGYQRLLQFPTVKSQQLRFVIDKSRAEPLISHLGIYMDKFSTVSSMSDSTSQT 120
+ + G +G+ RL + PT+ ++QL+ + P+ S +G ++ K + + + + + T
Sbjct: 224 QALKGGNMGWSRLQELPTLFAEQLQLAQKGAVVGPIRSGVGFHILKVNDIRGGNPTIAVT 283
Query: 121 SLNGSHILQKS 131
++ HIL ++
Sbjct: 284 EVHARHILLRT 294
>sp|Q6FJW0|IRS4_CANGA Increased rDNA silencing protein 4 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=IRS4 PE=3 SV=1
Length = 870
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 14/127 (11%)
Query: 19 TLLINLQEPVSFNVLQVQEPIHMGQRISRFHLDILNEERKWKKVINGTTVG--------Y 70
T+ ++ EP + L+ P +M I + ++E RK V+NG+
Sbjct: 238 TIKGSVSEPNTVTPLRQNSPSNMDDIIQKMEAVDIDEGRKNSFVMNGSGDSVDSLKPNVV 297
Query: 71 QRLLQFPTVKSQQLRFVIDK--SRAEPLISHLGIY-MDKFSTVSSMSDSTSQ---TSLNG 124
+R ++ P+ + + IDK S EP + G + FS +SS+ D +S T + G
Sbjct: 298 RRPMRTPSGRRVRPPSPIDKIGSIQEPHLESTGFNDQNDFSEMSSLIDGSSSEDITKIRG 357
Query: 125 SHILQKS 131
S I ++S
Sbjct: 358 SGIRERS 364
>sp|A2ASS6|TITIN_MOUSE Titin OS=Mus musculus GN=Ttn PE=1 SV=1
Length = 35213
Score = 30.0 bits (66), Expect = 4.8, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 42 GQRISRFHLDILNEERKWKKVINGTTVGY 70
G RI+ + +D L EE KW++V+ ++ Y
Sbjct: 21701 GSRITGYVVDFLTEENKWQRVMKSLSLQY 21729
>sp|Q8R0S4|CACB4_MOUSE Voltage-dependent L-type calcium channel subunit beta-4 OS=Mus
musculus GN=Cacnb4 PE=1 SV=2
Length = 519
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 61 KVINGTTVGYQRLLQFPTVKSQQLRFVIDKSRAEPLISHLGIYMDKFSTVSSMSDSTSQT 120
K +N V +L Q P + ++D+++ E HLG Y++ + + S ST T
Sbjct: 354 KHLNVQLVAADKLAQCPP---EMFDVILDENQLEDACEHLGEYLEAYWRATHTSSSTPMT 410
Query: 121 SLNGSHILQKSMS 133
L G ++ ++S
Sbjct: 411 PLLGRNVGSTALS 423
>sp|P16100|IDH_AZOVI Isocitrate dehydrogenase [NADP] OS=Azotobacter vinelandii GN=icd
PE=1 SV=5
Length = 741
Score = 29.6 bits (65), Expect = 6.1, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 32 VLQVQEPIHMGQRISRFHLDILNEERKWKKVI-----NGTTVGYQRLLQFPTVKSQQL 84
+++V +PI GQ +S F+ D L + + K I NG Y R+ P K +++
Sbjct: 258 MMKVSDPIMFGQIVSEFYKDALTKHAEVLKQIGFDVNNGIGDLYARIKTLPEAKQKEI 315
>sp|Q8U1S6|CMR2_PYRFU CRISPR system Cmr subunit Cmr2 OS=Pyrococcus furiosus (strain ATCC
43587 / DSM 3638 / JCM 8422 / Vc1) GN=cmr2 PE=1 SV=1
Length = 871
Score = 29.6 bits (65), Expect = 6.3, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 50 LDILNEERKWKKVINGTTVGYQR---LLQFPTVKSQQLRFVI-DKSRAEPLISHLG 101
L I N E + KK+++ + Y R + Q + S+ RF+I K EP+I LG
Sbjct: 20 LKIENHEERSKKILSSGNIQYSRTDKVKQADALSSKTQRFIIRTKENKEPVIDFLG 75
>sp|Q8DVD3|SYI_STRMU Isoleucine--tRNA ligase OS=Streptococcus mutans serotype c (strain
ATCC 700610 / UA159) GN=ileS PE=3 SV=1
Length = 930
Score = 28.9 bits (63), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 85 RFVIDKSRAEPLISHLGIYMDKFSTVSSMSDSTSQTSLNGSHI 127
RF D + L +H GI +D+ T+ D+ + +NG H+
Sbjct: 276 RFAWDNPQV--LATHKGIELDRIVTIHPWDDNVEELVMNGDHV 316
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.130 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,205,943
Number of Sequences: 539616
Number of extensions: 1717929
Number of successful extensions: 3841
Number of sequences better than 100.0: 15
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 3832
Number of HSP's gapped (non-prelim): 15
length of query: 141
length of database: 191,569,459
effective HSP length: 105
effective length of query: 36
effective length of database: 134,909,779
effective search space: 4856752044
effective search space used: 4856752044
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)