Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>032426
MASIRSFGKWTVDHQICPQHTTIQAKQAVVSIPISRRAAAILISSLPFSVISLPKCSEAR
ERRNKKAIPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVGLNFKVEFQRYIIIVFTFS
VVLPRTNVTRHLNCGVETQIL

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  032426
        (141 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2030502 - symbol:AT1G20810 "AT1G20810" species...   238  4.4e-20   1
UNIPROTKB|Q0E4I6 - symbol:Os02g0117600 "Peptidyl-prolyl c...   176  1.6e-13   1


>TAIR|locus:2030502 [details] [associations]
            symbol:AT1G20810 "AT1G20810" species:3702 "Arabidopsis
            thaliana" [GO:0000413 "protein peptidyl-prolyl isomerization"
            evidence=IBA] [GO:0003755 "peptidyl-prolyl cis-trans isomerase
            activity" evidence=ISS;IBA] [GO:0005528 "FK506 binding"
            evidence=ISS;IBA] [GO:0006457 "protein folding" evidence=IEA]
            [GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0009543
            "chloroplast thylakoid lumen" evidence=ISS;IDA] [GO:0016020
            "membrane" evidence=IBA] [GO:0018208 "peptidyl-proline
            modification" evidence=IBA] [GO:0031977 "thylakoid lumen"
            evidence=IDA] InterPro:IPR001179 Pfam:PF00254 PROSITE:PS50059
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009507 GO:GO:0006457
            GO:GO:0016020 EMBL:AC069251 GO:GO:0031977 KO:K01802 GO:GO:0003755
            GO:GO:0009543 HOGENOM:HOG000154887 GO:GO:0005528 InterPro:IPR023566
            PANTHER:PTHR10516 EMBL:AK117407 EMBL:BT005089 IPI:IPI00523910
            PIR:E86340 RefSeq:NP_173504.1 UniGene:At.41686
            ProteinModelPortal:Q9LM71 SMR:Q9LM71 STRING:Q9LM71 PaxDb:Q9LM71
            PRIDE:Q9LM71 EnsemblPlants:AT1G20810.1 GeneID:838672
            KEGG:ath:AT1G20810 TAIR:At1g20810 eggNOG:NOG246660
            InParanoid:Q9LM71 OMA:DNPNGLF PhylomeDB:Q9LM71
            ProtClustDB:CLSN2679433 Genevestigator:Q9LM71 GermOnline:AT1G20810
            Uniprot:Q9LM71
        Length = 232

 Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
 Identities = 59/113 (52%), Positives = 77/113 (68%)

Query:     1 MASIRSFGKWTVD-HQICPQHTTI-QAKQA-----VV--SIPISRR-AAAILISSLPFS- 49
             MASI S  +W  + H   P+ T+I +A Q+     VV  S+PISRR A+ IL+SS+P + 
Sbjct:     1 MASISSLHRWASNQHSRLPRITSISEADQSRPINQVVAFSVPISRRDASIILLSSIPLTS 60

Query:    50 -VISLPKCSEARERRNKKAIPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQV 101
               +  P  SEARERR++K IPLE+Y T  +GLK+YDI EGKGPVA +GST QV
Sbjct:    61 FFVLTPSSSEARERRSRKVIPLEEYSTGPEGLKFYDIEEGKGPVATEGSTAQV 113


>UNIPROTKB|Q0E4I6 [details] [associations]
            symbol:Os02g0117600 "Peptidyl-prolyl cis-trans isomerase"
            species:39947 "Oryza sativa Japonica Group" [GO:0000413 "protein
            peptidyl-prolyl isomerization" evidence=ISS] [GO:0003755
            "peptidyl-prolyl cis-trans isomerase activity" evidence=ISS]
            [GO:0005528 "FK506 binding" evidence=ISS] [GO:0016020 "membrane"
            evidence=ISS] [GO:0018208 "peptidyl-proline modification"
            evidence=ISS] InterPro:IPR001179 Pfam:PF00254 PROSITE:PS50059
            GO:GO:0009507 GO:GO:0006457 GO:GO:0016020 GO:GO:0031977
            EMBL:AP008208 KO:K01802 GO:GO:0003755 GO:GO:0005528
            InterPro:IPR023566 PANTHER:PTHR10516 ProtClustDB:CLSN2679433
            RefSeq:NP_001045688.2 UniGene:Os.79794 STRING:Q0E4I6 GeneID:4328090
            KEGG:osa:4328090 Gramene:Q0E4I6 Uniprot:Q0E4I6
        Length = 234

 Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
 Identities = 38/66 (57%), Positives = 46/66 (69%)

Query:    36 RRAAAILISSLPFSVISLPKCSEARERRNKKAIPLEDYHTTSDGLKYYDIVEGKGPVAQK 95
             RRAAA L+S+  F +   P    AR  R +  + LEDY T+ DGLKYYD+VEGKGP A+K
Sbjct:    53 RRAAAQLLSAAGFLIAVSPPSLAAR--RGRMVVSLEDYVTSPDGLKYYDLVEGKGPTAEK 110

Query:    96 GSTVQV 101
             GSTVQV
Sbjct:   111 GSTVQV 116


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.135   0.395    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      141       141   0.00091  102 3  11 22  0.40    31
                                                     30  0.47    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  581 (62 KB)
  Total size of DFA:  132 KB (2083 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.14u 0.13s 13.27t   Elapsed:  00:00:01
  Total cpu time:  13.14u 0.13s 13.27t   Elapsed:  00:00:01
  Start:  Sat May 11 05:00:55 2013   End:  Sat May 11 05:00:56 2013

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