Query 032436
Match_columns 141
No_of_seqs 135 out of 1013
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 23:08:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032436.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032436hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gla_A Low molecular weight he 100.0 6.8E-30 2.3E-34 177.8 12.5 96 30-136 3-100 (100)
2 4fei_A Heat shock protein-rela 100.0 5.5E-29 1.9E-33 174.6 10.7 96 28-137 3-98 (102)
3 4eld_A MJ16.5-P1, small heat s 99.9 5.4E-27 1.9E-31 176.3 11.2 94 33-137 58-154 (161)
4 3aab_A Putative uncharacterize 99.9 1.1E-26 3.8E-31 167.6 9.8 94 31-137 24-119 (123)
5 1gme_A Heat shock protein 16.9 99.9 1.6E-26 5.5E-31 172.6 10.0 98 30-137 42-141 (151)
6 2wj5_A Heat shock protein beta 99.9 2.3E-25 7.8E-30 156.2 11.9 89 33-137 3-92 (101)
7 3l1e_A Alpha-crystallin A chai 99.9 6E-25 2E-29 155.4 13.5 89 32-136 3-92 (106)
8 3q9p_A Heat shock protein beta 99.9 2.5E-25 8.5E-30 151.7 10.9 84 36-134 2-85 (85)
9 2y1y_A Alpha-crystallin B chai 99.9 1.1E-23 3.9E-28 144.5 10.4 84 38-137 3-87 (90)
10 2klr_A Alpha-crystallin B chai 99.9 6.7E-23 2.3E-27 156.8 9.9 88 33-136 65-153 (175)
11 2bol_A TSP36, small heat shock 99.9 8.6E-23 2.9E-27 168.6 11.1 96 29-140 96-195 (314)
12 2bol_A TSP36, small heat shock 99.9 5.6E-22 1.9E-26 163.7 10.0 89 33-134 222-314 (314)
13 2xcm_C SGT1-like protein, cyto 99.1 2.3E-10 7.8E-15 77.2 7.9 81 32-136 3-83 (92)
14 1rl1_A Suppressor of G2 allele 99.1 2.7E-10 9.2E-15 80.1 8.5 81 32-136 10-90 (114)
15 2k8q_A Protein SHQ1; beta-sand 97.9 2.6E-05 8.8E-10 57.1 6.5 78 32-137 4-85 (134)
16 3eud_A Protein SHQ1; CS domain 97.8 0.00037 1.3E-08 49.7 11.1 79 32-138 18-100 (115)
17 3igf_A ALL4481 protein; two-do 97.7 6.8E-05 2.3E-09 62.7 7.4 69 33-132 299-368 (374)
18 1x5m_A Calcyclin-binding prote 97.7 0.0011 3.7E-08 47.1 12.7 81 32-136 21-105 (127)
19 1wh0_A Ubiquitin carboxyl-term 97.7 0.00032 1.1E-08 50.9 9.6 88 33-135 21-112 (134)
20 1wgv_A KIAA1068 protein; CS do 97.5 0.0018 6.3E-08 45.8 11.6 82 30-135 18-102 (124)
21 3qor_A Nuclear migration prote 97.4 0.0012 4.1E-08 46.7 9.3 81 28-135 13-97 (121)
22 1wfi_A Nuclear distribution ge 97.4 0.00095 3.3E-08 47.6 8.5 78 31-135 7-88 (131)
23 2o30_A Nuclear movement protei 97.3 0.0022 7.5E-08 45.8 9.5 75 31-133 4-79 (131)
24 1ejf_A Progesterone receptor P 97.2 0.0019 6.5E-08 45.8 8.4 78 33-135 5-82 (125)
25 2rh0_A NUDC domain-containing 97.1 0.0056 1.9E-07 45.3 10.4 76 32-135 14-91 (157)
26 2cg9_X CO-chaperone protein SB 96.9 0.00071 2.4E-08 48.8 3.5 84 32-135 7-98 (134)
27 2kmw_A Uncharacterized protein 96.4 0.0072 2.5E-07 44.4 6.3 77 32-135 5-82 (150)
28 3q9p_A Heat shock protein beta 77.6 3.3 0.00011 26.7 4.2 34 99-134 7-40 (85)
29 2op6_A Heat shock 70 kDa prote 73.9 13 0.00045 26.2 7.0 44 33-76 48-102 (152)
30 3h0x_A 78 kDa glucose-regulate 73.6 15 0.0005 26.3 7.2 44 33-76 48-102 (152)
31 4fei_A Heat shock protein-rela 72.0 6.5 0.00022 26.0 4.7 32 42-76 62-94 (102)
32 3dob_A Heat shock 70 kDa prote 70.4 13 0.00045 26.6 6.4 44 33-76 48-102 (152)
33 1q5l_A Chaperone protein DNAK; 69.4 16 0.00055 25.5 6.5 44 33-76 65-119 (135)
34 3gla_A Low molecular weight he 69.1 8.6 0.00029 25.1 4.8 31 42-75 65-96 (100)
35 3dqg_A Heat shock 70 kDa prote 68.2 18 0.00063 25.8 6.7 44 33-76 48-102 (151)
36 2y1y_A Alpha-crystallin B chai 67.3 6.3 0.00021 25.5 3.7 33 99-133 6-38 (90)
37 3l1e_A Alpha-crystallin A chai 65.6 7.5 0.00026 26.0 4.0 33 98-132 11-43 (106)
38 3n8e_A Stress-70 protein, mito 64.8 22 0.00077 26.2 6.8 44 33-76 68-122 (182)
39 2wj5_A Heat shock protein beta 63.3 7.9 0.00027 25.7 3.7 34 99-134 11-44 (101)
40 2cql_A OK/SW-CL.103, 60S ribos 61.0 8.3 0.00028 26.1 3.5 17 55-74 21-37 (100)
41 1u00_A HSC66, chaperone protei 60.3 32 0.0011 26.0 7.1 44 33-76 46-100 (227)
42 3aab_A Putative uncharacterize 57.8 17 0.0006 24.6 4.8 36 98-135 33-69 (123)
43 4eld_A MJ16.5-P1, small heat s 55.9 14 0.00049 26.3 4.3 35 98-134 65-99 (161)
44 1gme_A Heat shock protein 16.9 54.3 15 0.0005 26.2 4.0 33 41-76 104-137 (151)
45 2ayh_A 1,3-1,4-beta-D-glucan 4 53.9 53 0.0018 24.1 7.3 41 65-109 42-83 (214)
46 1rl6_A Protein (ribosomal prot 52.6 26 0.0009 26.0 5.3 45 55-133 12-56 (177)
47 3juu_A Porphyranase B; glycosi 51.3 40 0.0014 26.4 6.5 52 54-110 64-119 (280)
48 1nkw_E 50S ribosomal protein L 50.3 33 0.0011 26.3 5.7 46 54-133 39-84 (212)
49 2nwt_A UPF0165 protein AF_2212 49.0 9.1 0.00031 24.5 1.9 13 114-127 3-15 (69)
50 3j21_F 50S ribosomal protein L 48.5 30 0.001 25.8 5.1 51 44-131 8-58 (184)
51 4e81_A Chaperone protein DNAK; 47.7 33 0.0011 25.9 5.3 44 33-76 49-103 (219)
52 1rl1_A Suppressor of G2 allele 45.8 23 0.00078 23.5 3.7 34 40-76 53-87 (114)
53 3iln_A Laminarinase; jelly ROW 45.0 50 0.0017 25.1 6.0 49 54-109 46-96 (251)
54 1vq8_E 50S ribosomal protein L 44.9 37 0.0013 25.2 5.1 46 55-133 10-55 (178)
55 2klr_A Alpha-crystallin B chai 44.3 20 0.00067 26.4 3.5 33 99-133 73-105 (175)
56 3i4i_A 1,3-1,4-beta-glucanase; 43.3 1.1E+02 0.0036 23.3 7.8 44 65-109 60-103 (234)
57 2hyk_A Beta-1,3-glucanase; fam 40.9 74 0.0025 23.8 6.4 48 54-109 49-98 (245)
58 4ate_A Beta-porphyranase A; hy 40.6 49 0.0017 25.8 5.4 49 54-108 55-111 (266)
59 2gjh_A Designed protein; oblig 39.8 25 0.00084 21.3 2.7 20 54-76 32-51 (62)
60 3iz5_F 60S ribosomal protein L 39.7 69 0.0024 23.9 5.9 45 55-132 14-60 (190)
61 3rq0_A Glycosyl hydrolases fam 37.6 76 0.0026 24.8 6.1 38 66-108 96-134 (269)
62 4awd_A Beta-porphyranase; hydr 36.9 88 0.003 25.1 6.5 53 53-110 85-145 (324)
63 3v2d_H 50S ribosomal protein L 34.6 72 0.0024 23.6 5.2 44 54-131 12-55 (180)
64 1o4z_A Beta-agarase B; glycosi 34.2 83 0.0028 25.4 6.0 50 53-110 103-153 (346)
65 3oeq_A Frataxin homolog, mitoc 33.4 30 0.001 24.3 2.8 17 115-132 48-64 (123)
66 3u5e_H L8, RP24, YL11, 60S rib 33.3 91 0.0031 23.3 5.7 46 54-132 13-59 (191)
67 1ew4_A CYAY protein; friedreic 33.1 17 0.00058 24.8 1.4 17 115-132 29-45 (106)
68 2w39_A Putative laminarinase; 32.6 71 0.0024 25.2 5.3 45 65-109 48-94 (298)
69 4atf_A Beta-agarase B; hydrola 32.2 1E+02 0.0034 24.7 6.1 49 53-109 72-121 (308)
70 2lez_A Secreted effector prote 31.2 1E+02 0.0035 22.3 5.3 40 36-76 65-104 (145)
71 3azy_A Laminarinase; beta-jell 31.0 1.4E+02 0.0047 22.8 6.6 45 65-109 59-107 (272)
72 3bbo_I Ribosomal protein L6; l 31.0 29 0.00098 26.8 2.5 46 54-133 54-100 (223)
73 3o5s_A Beta-glucanase; glycosy 30.2 1.8E+02 0.0061 22.0 7.3 41 65-109 67-107 (238)
74 2dng_A Eukaryotic translation 27.7 16 0.00054 23.3 0.5 31 105-135 21-51 (103)
75 2vy0_A Endo-beta-1,3-glucanase 27.7 1.5E+02 0.0051 22.3 6.2 46 65-110 62-113 (264)
76 1yuw_A Heat shock cognate 71 k 27.0 1.4E+02 0.0046 25.3 6.4 44 33-76 439-493 (554)
77 2zkr_e 60S ribosomal protein L 25.9 77 0.0026 23.7 4.1 19 53-74 12-30 (192)
78 2kgs_A Uncharacterized protein 25.5 46 0.0016 23.1 2.7 25 49-76 2-26 (132)
79 2o30_A Nuclear movement protei 23.3 85 0.0029 21.4 3.7 32 98-130 13-44 (131)
80 3r8s_G 50S ribosomal protein L 23.0 40 0.0014 24.9 2.0 42 54-129 11-52 (176)
81 2j76_E EIF-4B, EIF4B, eukaryot 22.6 28 0.00096 22.1 1.0 29 106-134 26-54 (100)
82 1dyp_A Kappa-carrageenase; hyd 21.3 1.8E+02 0.0061 22.0 5.6 51 53-109 44-109 (271)
83 3t3l_A Frataxin, mitochondrial 20.9 47 0.0016 23.4 1.9 17 114-131 40-56 (129)
84 3k67_A Putative dehydratase AF 20.6 1.2E+02 0.0041 21.4 4.2 35 41-75 120-154 (159)
85 4b9q_A Chaperone protein DNAK; 20.2 1.5E+02 0.005 25.5 5.3 44 33-76 437-491 (605)
No 1
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=99.97 E-value=6.8e-30 Score=177.80 Aligned_cols=96 Identities=22% Similarity=0.307 Sum_probs=84.6
Q ss_pred CCcceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeccCCEEEEEEEEee--cccCCceeeEEEEeccccCCCeeEEEEEEC
Q 032436 30 PLGLYDIGVSDKAYLFRVSLPGARKDTSNLKCIIRRNGNVQIQGVMTE--GDVAKNSSKVYKMLQQQLCPPGEFTVSFSL 107 (141)
Q Consensus 30 ~~~~vDi~Et~~~y~v~~dLPGv~kedi~V~ve~~~~~~L~I~G~~~~--~~~~~~~~~~er~~~~~~~~~G~F~R~~~L 107 (141)
+.|++||+|++++|+|.++|||+++++|+|++ +++.|+|+|+++. +.....+++.||. +|+|+|+|.|
T Consensus 3 ~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~---~~~~L~I~g~~~~~~~~~~~~~~~~er~-------~g~f~r~~~L 72 (100)
T 3gla_A 3 WVPRVDIKEEVNHFVLYADLPGIDPSQIEVQM---DKGILSIRGERKSESSTETERFSRIERR-------YGSFHRRFAL 72 (100)
T ss_dssp SCCCEEEEECSSEEEEEEECTTSCGGGCEEEE---ETTEEEEEEEECCGGGSSGGGEEEECCC-------CEEEEEEEEC
T ss_pred ccCcEEEEECCCEEEEEEECCCCCHHHEEEEE---ECCEEEEEEEEcCcCccCCccEEEEeec-------ceEEEEEEEC
Confidence 55699999999999999999999999999999 8999999999983 2334567777776 9999999999
Q ss_pred CCCCCCCCceeEeCCCCEEEEEEeccCCC
Q 032436 108 PGPVDPRLFHPQFRQDGILEGVVMKHRKA 136 (141)
Q Consensus 108 P~~vd~~~I~A~~~~dGVL~I~vPK~~~~ 136 (141)
|.+||.++|+|+|+ ||||+|++||.+++
T Consensus 73 P~~vd~~~i~A~~~-~GvL~I~~pK~~~a 100 (100)
T 3gla_A 73 PDSADADGITAAGR-NGVLEIRIPKRPAA 100 (100)
T ss_dssp CTTBCTTSCEEEEE-TTEEEEEEEBC---
T ss_pred CCCcChHHeEEEEe-CCEEEEEEecCCCC
Confidence 99999999999999 99999999998764
No 2
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=99.96 E-value=5.5e-29 Score=174.60 Aligned_cols=96 Identities=19% Similarity=0.226 Sum_probs=86.6
Q ss_pred CCCCcceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeccCCEEEEEEEEeecccCCceeeEEEEeccccCCCeeEEEEEEC
Q 032436 28 APPLGLYDIGVSDKAYLFRVSLPGARKDTSNLKCIIRRNGNVQIQGVMTEGDVAKNSSKVYKMLQQQLCPPGEFTVSFSL 107 (141)
Q Consensus 28 ~p~~~~vDi~Et~~~y~v~~dLPGv~kedi~V~ve~~~~~~L~I~G~~~~~~~~~~~~~~er~~~~~~~~~G~F~R~~~L 107 (141)
+.+.|++||+|++++|+|.++|||++++||+|++ +++.|+|+|+++.+ ..+++.||. +|+|.|+|.|
T Consensus 3 g~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~---~~~~L~I~g~~~~~---~~~~~~er~-------~g~f~R~~~L 69 (102)
T 4fei_A 3 GPWTPAADWRDAGTHLDLLLDVPGVDAGTLALAE---DGGQLTVSGERPGT---EHLLRSERP-------SGRFVRELAF 69 (102)
T ss_dssp EECCCCEEEEEETTEEEEEEECTTCCGGGCEEEE---ETTEEEEEEEECCC---SSCSSCCSE-------EEEEEEEEEC
T ss_pred CcccCcEEEEEcCCEEEEEEECCCCchHhEEEEE---ECCEEEEEEEEecC---CCEEEEEEe-------ccEEEEEEEC
Confidence 4566799999999999999999999999999999 89999999998632 456777777 9999999999
Q ss_pred CCCCCCCCceeEeCCCCEEEEEEeccCCCC
Q 032436 108 PGPVDPRLFHPQFRQDGILEGVVMKHRKAG 137 (141)
Q Consensus 108 P~~vd~~~I~A~~~~dGVL~I~vPK~~~~~ 137 (141)
|..||.++|+|+|+ ||||+|++||.+++.
T Consensus 70 P~~vd~~~i~A~~~-~GvL~I~lpK~~~~~ 98 (102)
T 4fei_A 70 PEPVRPASGVASLA-GGVLTVRFEKLRPTI 98 (102)
T ss_dssp SSCBCTTCCEEEEE-TTEEEEEEEBSSCCC
T ss_pred CCCcchhHcEEEEE-CCEEEEEEEccCccc
Confidence 99999999999999 999999999988753
No 3
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=99.94 E-value=5.4e-27 Score=176.29 Aligned_cols=94 Identities=17% Similarity=0.155 Sum_probs=84.1
Q ss_pred ceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeccCCEEEEEEEEee--cccCCceeeEEE-EeccccCCCeeEEEEEECCC
Q 032436 33 LYDIGVSDKAYLFRVSLPGARKDTSNLKCIIRRNGNVQIQGVMTE--GDVAKNSSKVYK-MLQQQLCPPGEFTVSFSLPG 109 (141)
Q Consensus 33 ~vDi~Et~~~y~v~~dLPGv~kedi~V~ve~~~~~~L~I~G~~~~--~~~~~~~~~~er-~~~~~~~~~G~F~R~~~LP~ 109 (141)
++||+|++++|+|.++|||++++||+|++ +++.|+|+|+++. +.....+++.|| . +|.|.|+|.||.
T Consensus 58 pvdi~e~~~~~~v~~dlPG~~~edi~V~~---~~~~L~I~g~~~~~~~~~~~~~~~~Er~~-------~g~f~R~~~LP~ 127 (161)
T 4eld_A 58 PISIIEGDQHIKVIAWLPGVNKEDIILNA---VGDTLEIRAKRSPLMITESERIIYSEIPE-------EEEIYRTIKLPA 127 (161)
T ss_dssp CEEEEECSSEEEEEEECTTCCGGGEEEEE---ETTEEEEEEECCCCCCCSSCEEEEECSCC-------CCEEEEEEECSS
T ss_pred ceeEEEeCCEEEEEEECCCCChHhEEEEE---ECCEEEEEEEEcccccCCCceEEEEEeec-------cccEEEEEECCC
Confidence 59999999999999999999999999999 8999999999873 223345666666 6 999999999999
Q ss_pred CCCCCCceeEeCCCCEEEEEEeccCCCC
Q 032436 110 PVDPRLFHPQFRQDGILEGVVMKHRKAG 137 (141)
Q Consensus 110 ~vd~~~I~A~~~~dGVL~I~vPK~~~~~ 137 (141)
+||.++|+|+|+ ||||+|++||.+.++
T Consensus 128 ~vd~~~i~A~~~-nGvL~I~lpK~~~~~ 154 (161)
T 4eld_A 128 TVKEENASAKFE-NGVLSVILPKAESSI 154 (161)
T ss_dssp CBCGGGCEEEEE-TTEEEEEEEBCGGGS
T ss_pred CcccccEEEEEE-CCEEEEEEEcCCCCC
Confidence 999999999999 999999999987753
No 4
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=99.94 E-value=1.1e-26 Score=167.55 Aligned_cols=94 Identities=11% Similarity=0.043 Sum_probs=84.8
Q ss_pred CcceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeccC-CEEEEEEEEeecccCCceeeEEEEeccccCCCeeEEEEEECCC
Q 032436 31 LGLYDIGVSDKAYLFRVSLPGARKDTSNLKCIIRRN-GNVQIQGVMTEGDVAKNSSKVYKMLQQQLCPPGEFTVSFSLPG 109 (141)
Q Consensus 31 ~~~vDi~Et~~~y~v~~dLPGv~kedi~V~ve~~~~-~~L~I~G~~~~~~~~~~~~~~er~~~~~~~~~G~F~R~~~LP~ 109 (141)
.|++||+|++++|+|.++|||++++||+|++ .+ +.|+|+|+++.+. ...|++.||. + +|.|+|.||.
T Consensus 24 ~P~~di~e~~~~~~v~~~lPG~~~edi~V~v---~~~~~L~I~g~~~~~~-~~~~~~~Er~-------~-~f~R~~~LP~ 91 (123)
T 3aab_A 24 YPPVDMYEEGGYLVVVADLAGFNKEKIKARV---SGQNELIIEAEREITE-PGVKYLTQRP-------K-YVRKVIRLPY 91 (123)
T ss_dssp CSCEEEEEETTEEEEEEECCSCCGGGCEEEE---ETTTEEEEEEECCCCC-CSCEEEECSC-------S-EEEEEEECSS
T ss_pred CCcEEEEEcCCEEEEEEECCCCCHHHEEEEE---eCCCEEEEEEEEeccC-CCeEEEEEEe-------E-EEEEEEECCC
Confidence 4589999999999999999999999999999 78 9999999987433 4567777776 8 9999999999
Q ss_pred CCCCCCc-eeEeCCCCEEEEEEeccCCCC
Q 032436 110 PVDPRLF-HPQFRQDGILEGVVMKHRKAG 137 (141)
Q Consensus 110 ~vd~~~I-~A~~~~dGVL~I~vPK~~~~~ 137 (141)
+||.++| +|+|+ ||||+|++||.+.++
T Consensus 92 ~vd~~~i~~A~~~-~GvL~I~lPK~~~~~ 119 (123)
T 3aab_A 92 NVAKDAEISGKYE-NGVLTIRIPIAGTSV 119 (123)
T ss_dssp EECTTCCCEEEEE-TTEEEEEEEGGGEEC
T ss_pred CcCcchhCeeEEc-CCEEEEEEEcCCCCc
Confidence 9999999 99999 999999999988765
No 5
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=99.94 E-value=1.6e-26 Score=172.63 Aligned_cols=98 Identities=19% Similarity=0.278 Sum_probs=84.9
Q ss_pred CCcceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeccCCEEEEEEEEee--cccCCceeeEEEEeccccCCCeeEEEEEEC
Q 032436 30 PLGLYDIGVSDKAYLFRVSLPGARKDTSNLKCIIRRNGNVQIQGVMTE--GDVAKNSSKVYKMLQQQLCPPGEFTVSFSL 107 (141)
Q Consensus 30 ~~~~vDi~Et~~~y~v~~dLPGv~kedi~V~ve~~~~~~L~I~G~~~~--~~~~~~~~~~er~~~~~~~~~G~F~R~~~L 107 (141)
+.+++||+|++++|+|.++|||++++||+|+++ +++.|+|+|+++. +.....|++.||. +|+|.|+|.|
T Consensus 42 ~~p~~di~e~~d~~~v~~dlPGv~kedI~V~v~--~~~~L~I~g~~~~~~~~~~~~~~~~Er~-------~g~F~R~~~L 112 (151)
T 1gme_A 42 ANARMDWKETPEAHVFKADLPGVKKEEVKVEVE--DGNVLVVSGERTKEKEDKNDKWHRVERS-------SGKFVRRFRL 112 (151)
T ss_dssp GGGCEEEEECSSEEEEEEECTTCCGGGEEEEEE--TTTEEEEEECCCCCCCCTTCEEEECCCC-------CCCEEEEEEC
T ss_pred cCCceEEEEcCCEEEEEEECCCCChHHEEEEEe--cCCEEEEEEEEccccccCCceEEEEeEe-------ccEEEEEEEC
Confidence 345899999999999999999999999999882 3579999999873 2234467766776 9999999999
Q ss_pred CCCCCCCCceeEeCCCCEEEEEEeccCCCC
Q 032436 108 PGPVDPRLFHPQFRQDGILEGVVMKHRKAG 137 (141)
Q Consensus 108 P~~vd~~~I~A~~~~dGVL~I~vPK~~~~~ 137 (141)
|.+||.++|+|+|+ ||||+|++||.+.++
T Consensus 113 P~~vd~~~i~A~~~-nGvL~I~lPK~~~~~ 141 (151)
T 1gme_A 113 LEDAKVEEVKAGLE-NGVLTVTVPKAEVKK 141 (151)
T ss_dssp SSCCCGGGCEEEEE-TTEEEEEEECCCCCT
T ss_pred CCCccccceEEEEE-CCEEEEEEEccCcCC
Confidence 99999999999999 999999999987653
No 6
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.93 E-value=2.3e-25 Score=156.23 Aligned_cols=89 Identities=13% Similarity=0.193 Sum_probs=77.5
Q ss_pred ceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeccCCEEEEEEEEeecccCCceeeEEEEeccccCCCeeEEEEEECCCCCC
Q 032436 33 LYDIGVSDKAYLFRVSLPGARKDTSNLKCIIRRNGNVQIQGVMTEGDVAKNSSKVYKMLQQQLCPPGEFTVSFSLPGPVD 112 (141)
Q Consensus 33 ~vDi~Et~~~y~v~~dLPGv~kedi~V~ve~~~~~~L~I~G~~~~~~~~~~~~~~er~~~~~~~~~G~F~R~~~LP~~vd 112 (141)
.+||+|++++|+|.++|||++++||+|++ +++.|+|+|++..+.....|++ .+|.|+|.||.+||
T Consensus 3 ~vdi~e~~~~~~v~~dlPG~~~edI~V~v---~~~~L~I~g~~~~~~~~~~~~~------------~eF~R~~~LP~~vd 67 (101)
T 2wj5_A 3 MAQVPTDPGYFSVLLDVKHFSPEEISVKV---VGDHVEVHARHEERPDEHGFIA------------REFHRRYRLPPGVD 67 (101)
T ss_dssp CCCCCCCSSCEEEEEECTTSCGGGEEEEE---ETTEEEEEEEEEECSSTTCCEE------------EEEEEEEECCTTBC
T ss_pred cEEEEEeCCEEEEEEECCCCcHHHeEEEE---ECCEEEEEEEEecccCCCCEEE------------EEEEEEEECCCCcC
Confidence 68999999999999999999999999999 8999999999874322223321 25999999999999
Q ss_pred CCCceeEe-CCCCEEEEEEeccCCCC
Q 032436 113 PRLFHPQF-RQDGILEGVVMKHRKAG 137 (141)
Q Consensus 113 ~~~I~A~~-~~dGVL~I~vPK~~~~~ 137 (141)
.++|+|+| + ||||+|++||.+.++
T Consensus 68 ~~~i~A~~s~-nGvL~I~lPK~~~~~ 92 (101)
T 2wj5_A 68 PAAVTSALSP-EGVLSIQATPASAQA 92 (101)
T ss_dssp TTCCEEEECT-TSEEEEEECBCCCCC
T ss_pred hhHCEEEECC-CCEEEEEEECCCcCC
Confidence 99999999 8 999999999987654
No 7
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.93 E-value=6e-25 Score=155.42 Aligned_cols=89 Identities=18% Similarity=0.262 Sum_probs=77.1
Q ss_pred cceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeccCCEEEEEEEEeecccCCceeeEEEEeccccCCCeeEEEEEECCCCC
Q 032436 32 GLYDIGVSDKAYLFRVSLPGARKDTSNLKCIIRRNGNVQIQGVMTEGDVAKNSSKVYKMLQQQLCPPGEFTVSFSLPGPV 111 (141)
Q Consensus 32 ~~vDi~Et~~~y~v~~dLPGv~kedi~V~ve~~~~~~L~I~G~~~~~~~~~~~~~~er~~~~~~~~~G~F~R~~~LP~~v 111 (141)
+..||+|++++|+|.++||||+++||+|++ +++.|+|+|++........|+ ..+|.|+|.||.+|
T Consensus 3 g~~~i~e~~~~~~v~~dlPG~~~edi~V~v---~~~~L~I~g~~~~~~~~~~~~------------~~eF~R~~~LP~~v 67 (106)
T 3l1e_A 3 GISEVRSDRDKFVIFLDVKHFSPEDLTVKV---QEDFVEIHGKHNERQDDHGYI------------SREFHRRYRLPSNV 67 (106)
T ss_dssp CSEEEEECSSEEEEEEECTTSCGGGEEEEE---ETTEEEEEEEEEEEETTTEEE------------EEEEEEEEECCTTB
T ss_pred CceEEEEcCCEEEEEEECCCCChHHEEEEE---ECCEEEEEEEEccccCCCCEE------------EEEEEEEEECCCCc
Confidence 368999999999999999999999999999 899999999986322222222 24699999999999
Q ss_pred CCCCceeEe-CCCCEEEEEEeccCCC
Q 032436 112 DPRLFHPQF-RQDGILEGVVMKHRKA 136 (141)
Q Consensus 112 d~~~I~A~~-~~dGVL~I~vPK~~~~ 136 (141)
|.++|+|+| + ||||+|++||.+++
T Consensus 68 d~~~i~A~~s~-~GvL~I~~PK~~~~ 92 (106)
T 3l1e_A 68 DQSALSCSLSA-DGMLTFSGPKIPSG 92 (106)
T ss_dssp CTTSCEEEECT-TSEEEEEEEBCCCC
T ss_pred ChhHcEEEECC-CCEEEEEEEccCcc
Confidence 999999999 8 99999999998875
No 8
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=99.93 E-value=2.5e-25 Score=151.66 Aligned_cols=84 Identities=18% Similarity=0.241 Sum_probs=70.3
Q ss_pred EEEcCCeEEEEEEcCCCCCCCeEEEEEeccCCEEEEEEEEeecccCCceeeEEEEeccccCCCeeEEEEEECCCCCCCCC
Q 032436 36 IGVSDKAYLFRVSLPGARKDTSNLKCIIRRNGNVQIQGVMTEGDVAKNSSKVYKMLQQQLCPPGEFTVSFSLPGPVDPRL 115 (141)
Q Consensus 36 i~Et~~~y~v~~dLPGv~kedi~V~ve~~~~~~L~I~G~~~~~~~~~~~~~~er~~~~~~~~~G~F~R~~~LP~~vd~~~ 115 (141)
+.|++++|.|.++||||+++||+|++ +++.|+|+|+++....... +.+|+|.|+|.||.+||+++
T Consensus 2 ~~E~~~~~~v~~dlPG~~~edi~V~v---~~~~L~I~g~~~~~~~~~~------------~~~~~F~R~~~LP~~vd~~~ 66 (85)
T 3q9p_A 2 GSHTADRWRVSLDVNHFAPDELTVKT---KDGVVEITGKHAARQDEHG------------YISRCFTRKYTLPPGVDPTQ 66 (85)
T ss_dssp -CCCCCEEEEEEECTTTCCSEEEEEE---ETTEEEEEEEEC-------------------CCCEEEEEEEECCTTCCGGG
T ss_pred ccCcCCEEEEEEECCCCChHHEEEEE---ECCEEEEEEEEccccCCCC------------EEEEEEEEEEECCCCcChHH
Confidence 46899999999999999999999999 8999999999873211111 12789999999999999999
Q ss_pred ceeEeCCCCEEEEEEeccC
Q 032436 116 FHPQFRQDGILEGVVMKHR 134 (141)
Q Consensus 116 I~A~~~~dGVL~I~vPK~~ 134 (141)
|+|+|+.||||+|++||.+
T Consensus 67 i~A~~~~~GvL~I~lPK~k 85 (85)
T 3q9p_A 67 VSSSLSPEGTLTVEAPMPK 85 (85)
T ss_dssp CEEEECTTSEEEEEEECCC
T ss_pred cEEEECCCCEEEEEEEcCC
Confidence 9999955999999999954
No 9
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=99.90 E-value=1.1e-23 Score=144.55 Aligned_cols=84 Identities=15% Similarity=0.288 Sum_probs=67.4
Q ss_pred EcCCeEEEEEEcCCCCCCCeEEEEEeccCCEEEEEEEEeecccCCceeeEEEEeccccCCCeeEEEEEECCCCCCCCCce
Q 032436 38 VSDKAYLFRVSLPGARKDTSNLKCIIRRNGNVQIQGVMTEGDVAKNSSKVYKMLQQQLCPPGEFTVSFSLPGPVDPRLFH 117 (141)
Q Consensus 38 Et~~~y~v~~dLPGv~kedi~V~ve~~~~~~L~I~G~~~~~~~~~~~~~~er~~~~~~~~~G~F~R~~~LP~~vd~~~I~ 117 (141)
+++++|+|.++|||++++||+|++ +++.|+|+|++..+.....|+ ..+|+|+|.||.+||.++|+
T Consensus 3 ~~~~~~~v~~dlPG~~~edi~V~v---~~~~L~I~g~~~~~~~~~~~~------------~~ef~R~~~LP~~vd~~~i~ 67 (90)
T 2y1y_A 3 MEKDRFSVNLDVKHFSPEELKVKV---LGDVIEVHGKHEERQDEHGFI------------SREFHRKYRIPADVDPLTIT 67 (90)
T ss_dssp ---CCEEEEEECTTSCGGGEEEEE---ETTEEEEEEEEEEEECSSSEE------------EEEEEEEEECCTTBCGGGCE
T ss_pred cCCCEEEEEEECCCCcHHHeEEEE---ECCEEEEEEEEecccCCCCEE------------EEEEEEEEECCCCcChhHcE
Confidence 689999999999999999999999 899999999987332222332 23699999999999999999
Q ss_pred eEe-CCCCEEEEEEeccCCCC
Q 032436 118 PQF-RQDGILEGVVMKHRKAG 137 (141)
Q Consensus 118 A~~-~~dGVL~I~vPK~~~~~ 137 (141)
|+| + ||||+|++||.+.++
T Consensus 68 A~~~~-~GvL~I~~pK~~~~~ 87 (90)
T 2y1y_A 68 SSMSS-DGVLTVNGPRKQVSG 87 (90)
T ss_dssp EEECT-TSEEEEEECBC----
T ss_pred EEECC-CCEEEEEEEcCCCCC
Confidence 999 8 999999999987754
No 10
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=99.88 E-value=6.7e-23 Score=156.83 Aligned_cols=88 Identities=15% Similarity=0.277 Sum_probs=71.0
Q ss_pred ceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeccCCEEEEEEEEeecccCCceeeEEEEeccccCCCeeEEEEEECCCCCC
Q 032436 33 LYDIGVSDKAYLFRVSLPGARKDTSNLKCIIRRNGNVQIQGVMTEGDVAKNSSKVYKMLQQQLCPPGEFTVSFSLPGPVD 112 (141)
Q Consensus 33 ~vDi~Et~~~y~v~~dLPGv~kedi~V~ve~~~~~~L~I~G~~~~~~~~~~~~~~er~~~~~~~~~G~F~R~~~LP~~vd 112 (141)
.+||+|++++|+|.++|||+++|||+|++ .++.|+|+|++..+.....++ ..+|.|+|.||.+||
T Consensus 65 ~~dv~e~~d~~~v~~dlPG~~~edI~V~v---~~~~L~I~g~~~~~~~~~~~~------------~reF~R~~~LP~~Vd 129 (175)
T 2klr_A 65 LSEMRLEKDRFSVNLDVKHFSPEELKVKV---LGDVIEVHGKHEERQDEHGFI------------SREFHRKYRIPADVD 129 (175)
T ss_dssp ----CCCCSEEEEEECCSSCCGGGEEEEE---ETTEEEEEEEEEEEEETTEEE------------EEEEEEEEECTTTCC
T ss_pred ceEEEEcCCeEEEEEECCCCChHHEEEEE---ECCEEEEEEEEcccccCCceE------------EEEEEEEEECCCCcC
Confidence 58999999999999999999999999999 899999999987322222222 235999999999999
Q ss_pred CCCceeEe-CCCCEEEEEEeccCCC
Q 032436 113 PRLFHPQF-RQDGILEGVVMKHRKA 136 (141)
Q Consensus 113 ~~~I~A~~-~~dGVL~I~vPK~~~~ 136 (141)
.++|+|+| + ||||+|++||.+.+
T Consensus 130 ~~~i~A~~s~-dGvL~I~lPK~~~~ 153 (175)
T 2klr_A 130 PLTITSSLSS-DGVLTVNGPRKQVS 153 (175)
T ss_dssp TTTCEEEECT-TSCEEEEEECC---
T ss_pred hhHeEEEEcC-CCEEEEEEECCCCC
Confidence 99999999 8 99999999998764
No 11
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.88 E-value=8.6e-23 Score=168.61 Aligned_cols=96 Identities=14% Similarity=0.078 Sum_probs=83.9
Q ss_pred CCCcceeEEEcCC----eEEEEEEcCCCCCCCeEEEEEeccCCEEEEEEEEeecccCCceeeEEEEeccccCCCeeEEEE
Q 032436 29 PPLGLYDIGVSDK----AYLFRVSLPGARKDTSNLKCIIRRNGNVQIQGVMTEGDVAKNSSKVYKMLQQQLCPPGEFTVS 104 (141)
Q Consensus 29 p~~~~vDi~Et~~----~y~v~~dLPGv~kedi~V~ve~~~~~~L~I~G~~~~~~~~~~~~~~er~~~~~~~~~G~F~R~ 104 (141)
.+.+++||+|+++ +|+|.++|||++|++|+|++ +++.|+|+|+++.+.... |. +|+|.|+
T Consensus 96 ~~~p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v---~~~~L~I~ge~~~~~e~~------r~-------~g~F~R~ 159 (314)
T 2bol_A 96 ELDFLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKA---DKNKLVVRAQKSVACGDA------AM-------SESVGRS 159 (314)
T ss_dssp TTGGGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEE---ETTEEEEEECCBSSTTCC------CB-------CCCEEEE
T ss_pred cCCCccceEEcCCCCceEEEEEEECCCCchHHeEEEE---ECCEEEEEEEEeccCCCC------EE-------EEEEEEE
Confidence 3567999999999 99999999999999999999 899999999987322211 33 8999999
Q ss_pred EECCCCCCCCCceeEeCCCCEEEEEEeccCCCCCCC
Q 032436 105 FSLPGPVDPRLFHPQFRQDGILEGVVMKHRKAGKYL 140 (141)
Q Consensus 105 ~~LP~~vd~~~I~A~~~~dGVL~I~vPK~~~~~k~~ 140 (141)
|.||..||+++|+|+|+.||||+|++||.+++.+.|
T Consensus 160 ~~LP~~Vd~e~i~A~~~~nGVL~I~lPK~~~~~~~I 195 (314)
T 2bol_A 160 IPLPPSVDRNHIQATITTDDVLVIEAPVNEPNYKAI 195 (314)
T ss_dssp EECCTTBCGGGCEEEECSSSEEEEEEEBSSCCTTTE
T ss_pred EECCCCccccccEEEEeCCCEEEEEEeccCccccee
Confidence 999999999999999988999999999998876543
No 12
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.86 E-value=5.6e-22 Score=163.72 Aligned_cols=89 Identities=16% Similarity=0.215 Sum_probs=71.4
Q ss_pred ceeEEEcC---CeEEEEEEc-CCCCCCCeEEEEEeccCCEEEEEEEEeecccCCceeeEEEEeccccCCCeeEEEEEECC
Q 032436 33 LYDIGVSD---KAYLFRVSL-PGARKDTSNLKCIIRRNGNVQIQGVMTEGDVAKNSSKVYKMLQQQLCPPGEFTVSFSLP 108 (141)
Q Consensus 33 ~vDi~Et~---~~y~v~~dL-PGv~kedi~V~ve~~~~~~L~I~G~~~~~~~~~~~~~~er~~~~~~~~~G~F~R~~~LP 108 (141)
.++|.+++ ++|.|.++| ||++|+||+|++ ++|.|+|+|+++.+.. .+++.||. +|+|+|+|.||
T Consensus 222 ~~~i~e~~~~~~~~~v~~~ldPG~~~edi~V~v---~~~~LtI~ge~~~~~~--~~~~~Er~-------~g~F~R~~~LP 289 (314)
T 2bol_A 222 GLEIVTAEDGSKKIHLELKVDPHFAPKDVKVWA---KGNKVYVHGVTGKEEK--TENASHSE-------HREFYKAFVTP 289 (314)
T ss_dssp EEEEEECTTSCEEEEEEEECCTTCCGGGEEEEE---SSSEEEEEEEEC---------------------CEEEEEEEECS
T ss_pred CCcEEEecCCCcEEEEEEEcCCCCChHHeEEEE---ECCEEEEEEEEeccCC--ceEEEEEe-------eeEEEEEEECC
Confidence 46777765 689999999 999999999999 8999999999884322 46777887 99999999999
Q ss_pred CCCCCCCceeEeCCCCEEEEEEeccC
Q 032436 109 GPVDPRLFHPQFRQDGILEGVVMKHR 134 (141)
Q Consensus 109 ~~vd~~~I~A~~~~dGVL~I~vPK~~ 134 (141)
.+||+++|+|+|+ ||||+|++||.+
T Consensus 290 ~~vd~~~i~A~~~-dGvL~i~~Pk~~ 314 (314)
T 2bol_A 290 EVVDASKTQAEIV-DGLMVVEAPLFK 314 (314)
T ss_dssp SEECGGGCEEEEE-TTEEEEEEEEEC
T ss_pred CCcChHHeEEEEe-CCEEEEEEecCC
Confidence 9999999999999 999999999963
No 13
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=99.12 E-value=2.3e-10 Score=77.20 Aligned_cols=81 Identities=11% Similarity=0.010 Sum_probs=70.6
Q ss_pred cceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeccCCEEEEEEEEeecccCCceeeEEEEeccccCCCeeEEEEEECCCCC
Q 032436 32 GLYDIGVSDKAYLFRVSLPGARKDTSNLKCIIRRNGNVQIQGVMTEGDVAKNSSKVYKMLQQQLCPPGEFTVSFSLPGPV 111 (141)
Q Consensus 32 ~~vDi~Et~~~y~v~~dLPGv~kedi~V~ve~~~~~~L~I~G~~~~~~~~~~~~~~er~~~~~~~~~G~F~R~~~LP~~v 111 (141)
+.+|++++++.+.|.+.+||+.++++.|++ .++.|+|++... . -..|...+.|+..|
T Consensus 3 ~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~---~~~~l~v~~~~~---~-----------------~~~y~~~~~L~~~I 59 (92)
T 2xcm_C 3 YRHEYYQKPEEVVVTVFAKGIPKQNVNIDF---GEQILSVVIEVP---G-----------------EDAYYLQPRLFGKI 59 (92)
T ss_dssp SEEEEEEETTEEEEEEECCSCCGGGEEEEE---CSSBEEEEECCT---T-----------------SCCEEECCBBSSCB
T ss_pred ccccEEeCCCEEEEEEEECCCChHHeEEEE---ECCEEEEEEEcC---C-----------------CcEEEEeeEcCCcc
Confidence 378999999999999999999999999999 889999988531 0 12467788999999
Q ss_pred CCCCceeEeCCCCEEEEEEeccCCC
Q 032436 112 DPRLFHPQFRQDGILEGVVMKHRKA 136 (141)
Q Consensus 112 d~~~I~A~~~~dGVL~I~vPK~~~~ 136 (141)
+++..++.+. +|.|+|+|+|.++.
T Consensus 60 ~~~~s~~~~~-~~~l~i~L~K~~~~ 83 (92)
T 2xcm_C 60 IPDKCKYEVL-STKIEICLAKADII 83 (92)
T ss_dssp CGGGCEEEEC-SSCEEEEEEBSSSC
T ss_pred CchhEEEEEE-CCEEEEEEEcCCCC
Confidence 9999999999 99999999998753
No 14
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.12 E-value=2.7e-10 Score=80.09 Aligned_cols=81 Identities=11% Similarity=0.140 Sum_probs=71.0
Q ss_pred cceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeccCCEEEEEEEEeecccCCceeeEEEEeccccCCCeeEEEEEECCCCC
Q 032436 32 GLYDIGVSDKAYLFRVSLPGARKDTSNLKCIIRRNGNVQIQGVMTEGDVAKNSSKVYKMLQQQLCPPGEFTVSFSLPGPV 111 (141)
Q Consensus 32 ~~vDi~Et~~~y~v~~dLPGv~kedi~V~ve~~~~~~L~I~G~~~~~~~~~~~~~~er~~~~~~~~~G~F~R~~~LP~~v 111 (141)
+.+|++++++.+.|.+.+||++++++.|++ .++.|+|++.... -..|...+.|+..|
T Consensus 10 ~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~---~~~~l~v~~~~~~--------------------~~~y~~~~~L~~~I 66 (114)
T 1rl1_A 10 IKYDWYQTESQVVITLMIKNVQKNDVNVEF---SEKELSALVKLPS--------------------GEDYNLKLELLHPI 66 (114)
T ss_dssp CCEEEEECSSEEEEEECCCSCCGGGEEEEC---SSSCEEEEEECTT--------------------SSEEEEEECBSSCC
T ss_pred CCccEEeCCCEEEEEEEeCCCCHHHCEEEE---EcCEEEEEEEeCC--------------------CcEEEEEeeCCCcC
Confidence 379999999999999999999999999998 8899999986320 12577789999999
Q ss_pred CCCCceeEeCCCCEEEEEEeccCCC
Q 032436 112 DPRLFHPQFRQDGILEGVVMKHRKA 136 (141)
Q Consensus 112 d~~~I~A~~~~dGVL~I~vPK~~~~ 136 (141)
+++..++.+. +|.|+|+|+|.++.
T Consensus 67 ~~e~s~~~~~-~~~l~i~L~K~~~~ 90 (114)
T 1rl1_A 67 IPEQSTFKVL-STKIEIKLKKPEAV 90 (114)
T ss_dssp CGGGEEEEEC-SSSEEEEEECSSCC
T ss_pred CccccEEEEE-CCEEEEEEEcCCCC
Confidence 9999999999 99999999998753
No 15
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=97.90 E-value=2.6e-05 Score=57.10 Aligned_cols=78 Identities=12% Similarity=0.189 Sum_probs=63.8
Q ss_pred cceeEEEcCCeEEEEEEcCCCC--CCCeEEEEEeccCCEEEEEEEEeecccCCceeeEEEEeccccCCCeeEEEEEECCC
Q 032436 32 GLYDIGVSDKAYLFRVSLPGAR--KDTSNLKCIIRRNGNVQIQGVMTEGDVAKNSSKVYKMLQQQLCPPGEFTVSFSLPG 109 (141)
Q Consensus 32 ~~vDi~Et~~~y~v~~dLPGv~--kedi~V~ve~~~~~~L~I~G~~~~~~~~~~~~~~er~~~~~~~~~G~F~R~~~LP~ 109 (141)
|...|..+++..+|.+-+|.++ ..++++.+ ++..+.... -.|.-++.||.
T Consensus 4 P~F~itQd~e~viV~Ik~P~~~~~~sdiei~v---~~~~F~F~~-------------------------~PYyLRL~LP~ 55 (134)
T 2k8q_A 4 PRFSITQDEEFIFLKIFISNIRFSAVGLEIII---QENMIIFHL-------------------------SPYYLRLRFPH 55 (134)
T ss_dssp SEEEEEECSSEEEEEEECCSSCCCSSSCCCEE---CSSSEEECS-------------------------SSSCEEECCSS
T ss_pred ceEEEEECCCEEEEEEEcCccccCccccEEEE---eCCEEEEec-------------------------CCeEEEecCCC
Confidence 4678999999999999999999 88999888 655544322 24555799999
Q ss_pred CC-CCCCceeEeCC-CCEEEEEEeccCCCC
Q 032436 110 PV-DPRLFHPQFRQ-DGILEGVVMKHRKAG 137 (141)
Q Consensus 110 ~v-d~~~I~A~~~~-dGVL~I~vPK~~~~~ 137 (141)
.| +.+.-+|+|.. .|.|+|+|||..+.+
T Consensus 56 ~V~e~~~~kA~YD~d~~~~~VtLpK~~~Ge 85 (134)
T 2k8q_A 56 ELIDDERSTAQYDSKDECINVKVAKLNKNE 85 (134)
T ss_dssp CEECCSSCEEEEETTTTEEEEEEEESSTTC
T ss_pred eeecCCCcceeEeccCCEEEEEEeCCCCCC
Confidence 99 88999999983 699999999987754
No 16
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=97.81 E-value=0.00037 Score=49.67 Aligned_cols=79 Identities=11% Similarity=0.183 Sum_probs=63.6
Q ss_pred cceeEEEcCCeEEEEEEcCCCC--CCCeEEEEEeccCCEEEEEEEEeecccCCceeeEEEEeccccCCCeeEEEEEECCC
Q 032436 32 GLYDIGVSDKAYLFRVSLPGAR--KDTSNLKCIIRRNGNVQIQGVMTEGDVAKNSSKVYKMLQQQLCPPGEFTVSFSLPG 109 (141)
Q Consensus 32 ~~vDi~Et~~~y~v~~dLPGv~--kedi~V~ve~~~~~~L~I~G~~~~~~~~~~~~~~er~~~~~~~~~G~F~R~~~LP~ 109 (141)
|...|..+++..+|.+-+|-++ ..++++.+ ++....... -.|.-++.||.
T Consensus 18 P~F~itQDdefv~I~I~~p~ir~~a~~~ei~v---d~~~F~F~~-------------------------~PYyLRL~lP~ 69 (115)
T 3eud_A 18 PRFSITQDEEFIFLKIFISNIRFSAVGLEIII---QENMIIFHL-------------------------SPYYLRLRFPH 69 (115)
T ss_dssp CCEEEEECSSEEEEEEECCSCCCCSSSCEEEE---ETTEEEEEE-------------------------TTEEEEEECSS
T ss_pred CcEEEEECCCEEEEEEEcCceecccCccEEEE---eCCEEEEec-------------------------CCeEEEEecCc
Confidence 4789999999999999999877 67888888 666555443 24666799999
Q ss_pred CC-CCCCceeEeC-CCCEEEEEEeccCCCCC
Q 032436 110 PV-DPRLFHPQFR-QDGILEGVVMKHRKAGK 138 (141)
Q Consensus 110 ~v-d~~~I~A~~~-~dGVL~I~vPK~~~~~k 138 (141)
.+ +.+.-+|+|+ ++|.++|++||..+.+-
T Consensus 70 ~vved~~~~A~YD~d~g~~~v~lpK~~~GE~ 100 (115)
T 3eud_A 70 ELIDDERSTAQYDSKDECINVKVAKLNKNEY 100 (115)
T ss_dssp CEECSTTCEEEEETTTTEEEEEEEESSTTCC
T ss_pred ceecCCCcceEEeCCCcEEEEEEcCCcCCCc
Confidence 98 6678899997 46999999999887653
No 17
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=97.74 E-value=6.8e-05 Score=62.68 Aligned_cols=69 Identities=20% Similarity=0.287 Sum_probs=56.6
Q ss_pred ceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeccCCEEEEEEEEeecccCCceeeEEEEeccccCCCeeEEEEEECCCCCC
Q 032436 33 LYDIGVSDKAYLFRVSLPGARKDTSNLKCIIRRNGNVQIQGVMTEGDVAKNSSKVYKMLQQQLCPPGEFTVSFSLPGPVD 112 (141)
Q Consensus 33 ~vDi~Et~~~y~v~~dLPGv~kedi~V~ve~~~~~~L~I~G~~~~~~~~~~~~~~er~~~~~~~~~G~F~R~~~LP~~vd 112 (141)
++.|... .|.+++.|||++|++|++.- .++.|+|+. |.|+|.+.||....
T Consensus 299 ~~~i~~~--~~~~~l~lP~~~~~~~~l~~---~gdeL~v~~-------------------------g~~rR~i~LP~~L~ 348 (374)
T 3igf_A 299 PITIDTH--NRQVRLFLPGFDKKQVKLTQ---YGPEVTVEA-------------------------GDQRRNIFLPPALS 348 (374)
T ss_dssp SEEEETT--TTEEEEECTTCCGGGCEEEE---ETTEEEEEE-------------------------TTEEEEEECCTTTT
T ss_pred CEEEEec--cEEEEEECCCCCHHHeEEEE---ECCeEEEEE-------------------------CCEeecccCCHHHc
Confidence 4554333 89999999999999999987 788888864 78999999999765
Q ss_pred CC-CceeEeCCCCEEEEEEec
Q 032436 113 PR-LFHPQFRQDGILEGVVMK 132 (141)
Q Consensus 113 ~~-~I~A~~~~dGVL~I~vPK 132 (141)
-- -..|.|+ ||.|.|++-.
T Consensus 349 ~~~v~~A~~~-~~~L~i~~~~ 368 (374)
T 3igf_A 349 GRPITGAKFQ-NNYLIISFLE 368 (374)
T ss_dssp TCCEEEEEEE-TTEEEEEECC
T ss_pred CCCccccEEE-CCEEEEEEeh
Confidence 44 5689999 9999998743
No 18
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.73 E-value=0.0011 Score=47.15 Aligned_cols=81 Identities=12% Similarity=0.146 Sum_probs=66.7
Q ss_pred cceeEEEcCCeEEEEEEcCCC---CCCCeEEEEEeccCCEEEEEEEEeecccCCceeeEEEEeccccCCCeeEEEEEE-C
Q 032436 32 GLYDIGVSDKAYLFRVSLPGA---RKDTSNLKCIIRRNGNVQIQGVMTEGDVAKNSSKVYKMLQQQLCPPGEFTVSFS-L 107 (141)
Q Consensus 32 ~~vDi~Et~~~y~v~~dLPGv---~kedi~V~ve~~~~~~L~I~G~~~~~~~~~~~~~~er~~~~~~~~~G~F~R~~~-L 107 (141)
..++++.+.+...|.+.+||+ +++++.|++ ....|.|+..... .. .|.-.+. |
T Consensus 21 ~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~---~~~~l~v~~~~~~---~~-----------------~y~~~~~~L 77 (127)
T 1x5m_A 21 SNYGWDQSDKFVKIYITLTGVHQVPTENVQVHF---TERSFDLLVKNLN---GK-----------------SYSMIVNNL 77 (127)
T ss_dssp CSCEEEEETTEEEEEEECTTTTTSCTTSEEEEE---CSSEEEEEECSCS---SS-----------------CEEEEEECB
T ss_pred cEEEEEcCCCEEEEEEEeCCCCcCCccccEEEE---EcCEEEEEEEcCC---CC-----------------cEEEEhHHh
Confidence 378999999999999999999 899999998 8899999874211 11 2444674 8
Q ss_pred CCCCCCCCceeEeCCCCEEEEEEeccCCC
Q 032436 108 PGPVDPRLFHPQFRQDGILEGVVMKHRKA 136 (141)
Q Consensus 108 P~~vd~~~I~A~~~~dGVL~I~vPK~~~~ 136 (141)
-..|+++.-+.... ++-++|+|-|.+..
T Consensus 78 ~~~I~~e~S~~~v~-~~kVei~L~K~~~~ 105 (127)
T 1x5m_A 78 LKPISVEGSSKKVK-TDTVLILCRKKVEN 105 (127)
T ss_dssp SSCCCTTTCEEEEE-TTEEEEEEECSSSS
T ss_pred cCccCcccCEEEEe-CCEEEEEEEECCCC
Confidence 89999999999999 99999999998753
No 19
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=97.70 E-value=0.00032 Score=50.92 Aligned_cols=88 Identities=15% Similarity=0.132 Sum_probs=68.5
Q ss_pred ceeEEEc-CCeEEEEEEcCCCCCCCeEEEEEeccCCEEEEEEEEeecccCCceeeEEEEeccccCCCe---eEEEEEECC
Q 032436 33 LYDIGVS-DKAYLFRVSLPGARKDTSNLKCIIRRNGNVQIQGVMTEGDVAKNSSKVYKMLQQQLCPPG---EFTVSFSLP 108 (141)
Q Consensus 33 ~vDi~Et-~~~y~v~~dLPGv~kedi~V~ve~~~~~~L~I~G~~~~~~~~~~~~~~er~~~~~~~~~G---~F~R~~~LP 108 (141)
.+|++++ .+...|.+.++|+.++++.|.+ ..+.|+++........ -+.| -..| .|.-.+.|-
T Consensus 21 r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f---~~~~l~v~~~~~~~~~-l~~~----------~a~g~~~~y~~~~~L~ 86 (134)
T 1wh0_A 21 KNDSYEKGPDSVVVHVYVKEICRDTSRVLF---REQDFTLIFQTRDGNF-LRLH----------PGCGPHTTFRWQVKLR 86 (134)
T ss_dssp CEEEEEETTTEEEEEEECCSBCTTSCEEEE---CSSEEEEEECBCCHHH-HHHS----------TTCCTTSCEEEEEEBS
T ss_pred CeEEEcCCCCEEEEEEEeCCCCcccCEEEE---ECCEEEEEEEcCCCcc-cccc----------cccCcceeEEEecccc
Confidence 7999999 9999999999999999999999 8899999875321100 0000 0012 455678899
Q ss_pred CCCCCCCceeEeCCCCEEEEEEeccCC
Q 032436 109 GPVDPRLFHPQFRQDGILEGVVMKHRK 135 (141)
Q Consensus 109 ~~vd~~~I~A~~~~dGVL~I~vPK~~~ 135 (141)
..|+++.-+.... ++-++|+|.|.+.
T Consensus 87 ~~I~pe~S~~~v~-~~kIeI~L~K~e~ 112 (134)
T 1wh0_A 87 NLIEPEQCTFCFT-ASRIDICLRKRQS 112 (134)
T ss_dssp SCEEEEEEEEEEC-SSEEEEEEEESSS
T ss_pred ccCCchhCEEEEe-CCEEEEEEEECCC
Confidence 9999999999999 9999999999764
No 20
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=97.54 E-value=0.0018 Score=45.76 Aligned_cols=82 Identities=9% Similarity=0.040 Sum_probs=65.5
Q ss_pred CCcceeEEEcCCeEEEEEEcC-CC-CCCCeEEEEEeccCCEEEEEEEEeecccCCceeeEEEEeccccCCCeeEEEEEEC
Q 032436 30 PLGLYDIGVSDKAYLFRVSLP-GA-RKDTSNLKCIIRRNGNVQIQGVMTEGDVAKNSSKVYKMLQQQLCPPGEFTVSFSL 107 (141)
Q Consensus 30 ~~~~vDi~Et~~~y~v~~dLP-Gv-~kedi~V~ve~~~~~~L~I~G~~~~~~~~~~~~~~er~~~~~~~~~G~F~R~~~L 107 (141)
..+.+.+..+.+...|.+.|| |+ +++|+.|.+ ..+.|.|+.... .. . .+.-...|
T Consensus 18 ~~~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i---~~~~l~v~~~~~---~~--~---------------~~~~~~~L 74 (124)
T 1wgv_A 18 VRENYTWSQDYTDLEVRVPVPKHVVKGKQVSVAL---SSSSIRVAMLEE---NG--E---------------RVLMEGKL 74 (124)
T ss_dssp CCSSCEEEEETTEEEEEEECCTTCCSGGGEEEEE---CSSEEEEEEECS---SS--E---------------EEEEEEEB
T ss_pred cCCcEEEEEcccEEEEEEEcCCCCCchhheEEEE---EcCEEEEEEEcc---CC--C---------------ceEEcccc
Confidence 344799999999999999999 88 899999999 899999986421 00 0 11124679
Q ss_pred CCCCCCCCceeEeCCCC-EEEEEEeccCC
Q 032436 108 PGPVDPRLFHPQFRQDG-ILEGVVMKHRK 135 (141)
Q Consensus 108 P~~vd~~~I~A~~~~dG-VL~I~vPK~~~ 135 (141)
...|+++.-+-.++ +| .|+|+|-|.+.
T Consensus 75 ~~~I~~e~S~w~i~-~~k~v~i~L~K~~~ 102 (124)
T 1wgv_A 75 THKINTESSLWSLE-PGKCVLVNLSKVGE 102 (124)
T ss_dssp SSCBCTTTCEEEEC-TTSEEEEEECBSSS
T ss_pred cCcCCCcCCEEEEe-CCCEEEEEEEECCC
Confidence 99999999999999 88 49999999753
No 21
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=97.42 E-value=0.0012 Score=46.72 Aligned_cols=81 Identities=11% Similarity=0.016 Sum_probs=64.6
Q ss_pred CCCCcceeEEEcCCeEEEEEEcC-C--CCCCCeEEEEEeccCCEEEEEEEEeecccCCceeeEEEEeccccCCCeeEEEE
Q 032436 28 APPLGLYDIGVSDKAYLFRVSLP-G--ARKDTSNLKCIIRRNGNVQIQGVMTEGDVAKNSSKVYKMLQQQLCPPGEFTVS 104 (141)
Q Consensus 28 ~p~~~~vDi~Et~~~y~v~~dLP-G--v~kedi~V~ve~~~~~~L~I~G~~~~~~~~~~~~~~er~~~~~~~~~G~F~R~ 104 (141)
|-..+.+.+..|.+...|.+.|| | ++++|+.|.+ ..+.|.|... .. .+ .-.
T Consensus 13 G~~~~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i---~~~~l~v~~k--g~----~~-----------------~~~ 66 (121)
T 3qor_A 13 GADLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDI---QRRHLRVGLK--GQ----PA-----------------IID 66 (121)
T ss_dssp SCBCSSCEEEECSSEEEEEEECCCSSCCCGGGEEEEE---ETTEEEEEET--TS----CC-----------------SEE
T ss_pred CCcCCCEEEEEccceEEEEEECCCCCcccccceEEEE---EcCEEEEEEc--Cc----ce-----------------EEe
Confidence 33445799999999999999999 4 7999999999 7889988542 10 11 113
Q ss_pred EECCCCCCCCCceeEeCCCC-EEEEEEeccCC
Q 032436 105 FSLPGPVDPRLFHPQFRQDG-ILEGVVMKHRK 135 (141)
Q Consensus 105 ~~LP~~vd~~~I~A~~~~dG-VL~I~vPK~~~ 135 (141)
..|...|+++.-.-.++ +| .|+|+|-|.+.
T Consensus 67 g~L~~~I~~deS~w~i~-~~~~i~i~L~K~~~ 97 (121)
T 3qor_A 67 GELYNEVKVEESSWLIA-DGAVVTVHLEKINK 97 (121)
T ss_dssp EEBSSCBCGGGCEEEEE-TTTEEEEEEEBSSS
T ss_pred ccccccccccccEEEEc-CCCEEEEEEEECCC
Confidence 57889999999999999 98 99999999865
No 22
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=97.39 E-value=0.00095 Score=47.64 Aligned_cols=78 Identities=10% Similarity=-0.017 Sum_probs=63.9
Q ss_pred CcceeEEEcCCeEEEEEEcC-C--CCCCCeEEEEEeccCCEEEEEEEEeecccCCceeeEEEEeccccCCCeeEEEEEEC
Q 032436 31 LGLYDIGVSDKAYLFRVSLP-G--ARKDTSNLKCIIRRNGNVQIQGVMTEGDVAKNSSKVYKMLQQQLCPPGEFTVSFSL 107 (141)
Q Consensus 31 ~~~vDi~Et~~~y~v~~dLP-G--v~kedi~V~ve~~~~~~L~I~G~~~~~~~~~~~~~~er~~~~~~~~~G~F~R~~~L 107 (141)
.+.+.+..+.+...|.+.|| | ++++++.|.+ ..+.|.|+.. .. .+. . ...|
T Consensus 7 ~~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i---~~~~l~v~~k--g~----~~~----~-------------~~~L 60 (131)
T 1wfi_A 7 GPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDI---QRRHLRVGLK--GQ----PPV----V-------------DGEL 60 (131)
T ss_dssp CCSSEEEECSSEEEEEECCCCSSCCCTTSEEEEE---ETTEEEEEET--TS----CCS----B-------------CSCB
T ss_pred CCcEEEEecCCEEEEEEECCCCCcccccceEEEE---eCCEEEEEEC--Cc----eEE----E-------------eccc
Confidence 34789999999999999999 7 8999999999 8899999763 11 010 0 2467
Q ss_pred CCCCCCCCceeEeCCCC-EEEEEEeccCC
Q 032436 108 PGPVDPRLFHPQFRQDG-ILEGVVMKHRK 135 (141)
Q Consensus 108 P~~vd~~~I~A~~~~dG-VL~I~vPK~~~ 135 (141)
...|+++.-+-.++ +| .|+|+|-|.++
T Consensus 61 ~~~I~~e~s~w~i~-~~k~v~i~L~K~~~ 88 (131)
T 1wfi_A 61 YNEVKVEESSWLIE-DGKVVTVHLEKINK 88 (131)
T ss_dssp SSCBCSTTCEEEEE-TTTEEEEEEEBSSS
T ss_pred ccccccccCEEEEc-CCCEEEEEEEECCC
Confidence 88999999999999 98 99999999865
No 23
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=97.29 E-value=0.0022 Score=45.82 Aligned_cols=75 Identities=9% Similarity=0.073 Sum_probs=60.6
Q ss_pred CcceeEEEcCCeEEEEEEcC-CCCCCCeEEEEEeccCCEEEEEEEEeecccCCceeeEEEEeccccCCCeeEEEEEECCC
Q 032436 31 LGLYDIGVSDKAYLFRVSLP-GARKDTSNLKCIIRRNGNVQIQGVMTEGDVAKNSSKVYKMLQQQLCPPGEFTVSFSLPG 109 (141)
Q Consensus 31 ~~~vDi~Et~~~y~v~~dLP-Gv~kedi~V~ve~~~~~~L~I~G~~~~~~~~~~~~~~er~~~~~~~~~G~F~R~~~LP~ 109 (141)
.+.++++.+.+...|.+.|| |++++++.|.+ ..+.|.|+.. . . . .. ...|..
T Consensus 4 ~~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i---~~~~l~v~~~--g-----~---~-~~-------------~~~L~~ 56 (131)
T 2o30_A 4 EAKYTWDQELNEINIQFPVTGDADSSAIKIRM---VGKKICVKNQ--G-----E---I-VI-------------DGELLH 56 (131)
T ss_dssp -CCCEEEEETTEEEEEEECC---CCSCEEEEE---ETTEEEEEET--T-----E---E-EE-------------EEEBSS
T ss_pred CCcEEEEecCCEEEEEEECCCCCCccceEEEE---ECCEEEEEEC--C-----E---e-eE-------------cccccc
Confidence 45789999999999999996 99999999999 8899999762 0 0 0 11 367889
Q ss_pred CCCCCCceeEeCCCCEEEEEEecc
Q 032436 110 PVDPRLFHPQFRQDGILEGVVMKH 133 (141)
Q Consensus 110 ~vd~~~I~A~~~~dGVL~I~vPK~ 133 (141)
.|+++.-+-.+. +|-|+|+|-|.
T Consensus 57 ~I~~e~S~w~i~-~~kv~i~L~K~ 79 (131)
T 2o30_A 57 EVDVSSLWWVIN-GDVVDVNVTKK 79 (131)
T ss_dssp CEEEEEEEEEEE-TTEEEEEEEES
T ss_pred ccccccCEEEEe-CCEEEEEEEEC
Confidence 999999999999 88899999997
No 24
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=97.21 E-value=0.0019 Score=45.79 Aligned_cols=78 Identities=8% Similarity=-0.033 Sum_probs=64.1
Q ss_pred ceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeccCCEEEEEEEEeecccCCceeeEEEEeccccCCCeeEEEEEECCCCCC
Q 032436 33 LYDIGVSDKAYLFRVSLPGARKDTSNLKCIIRRNGNVQIQGVMTEGDVAKNSSKVYKMLQQQLCPPGEFTVSFSLPGPVD 112 (141)
Q Consensus 33 ~vDi~Et~~~y~v~~dLPGv~kedi~V~ve~~~~~~L~I~G~~~~~~~~~~~~~~er~~~~~~~~~G~F~R~~~LP~~vd 112 (141)
.++++.+.+...|.+.+|++ +++.|.+ ..+.|++++.... .. ..|.-.+.|-..|+
T Consensus 5 ~~~W~Qt~~~V~ltI~~~~~--~~~~V~~---~~~~l~~~~~~~~--~~-----------------~~y~~~l~L~~~I~ 60 (125)
T 1ejf_A 5 SAKWYDRRDYVFIEFCVEDS--KDVNVNF---EKSKLTFSCLGGS--DN-----------------FKHLNEIDLFHCID 60 (125)
T ss_dssp CEEEEECSSEEEEEECCTTE--EEEEEEE---ETTEEEEEEEETT--TT-----------------EEEEEEEEBSSCEE
T ss_pred ceeEEeCCCEEEEEEEecCC--CceEEEE---ECCEEEEEEEeCC--CC-----------------ceEEEEEEccceec
Confidence 69999999999999999996 5788888 7889999886311 00 12555788999999
Q ss_pred CCCceeEeCCCCEEEEEEeccCC
Q 032436 113 PRLFHPQFRQDGILEGVVMKHRK 135 (141)
Q Consensus 113 ~~~I~A~~~~dGVL~I~vPK~~~ 135 (141)
++.-+.... +.-++|+|.|.++
T Consensus 61 ~e~S~~~v~-~~kiei~L~K~~~ 82 (125)
T 1ejf_A 61 PNDSKHKRT-DRSILCCLRKGES 82 (125)
T ss_dssp EEEEEEEEC-SSCEEEEEEESST
T ss_pred cccCEEEEC-CCEEEEEEEECCC
Confidence 999999998 8889999999864
No 25
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=97.12 E-value=0.0056 Score=45.26 Aligned_cols=76 Identities=12% Similarity=0.037 Sum_probs=63.5
Q ss_pred cceeEEEcCCeEEEEEEcC-CCCCCCeEEEEEeccCCEEEEEEEEeecccCCceeeEEEEeccccCCCeeEEEEEECCCC
Q 032436 32 GLYDIGVSDKAYLFRVSLP-GARKDTSNLKCIIRRNGNVQIQGVMTEGDVAKNSSKVYKMLQQQLCPPGEFTVSFSLPGP 110 (141)
Q Consensus 32 ~~vDi~Et~~~y~v~~dLP-Gv~kedi~V~ve~~~~~~L~I~G~~~~~~~~~~~~~~er~~~~~~~~~G~F~R~~~LP~~ 110 (141)
+.+.+..+.+...|.+.|| |++++++.|.+ ..+.|.|+.. . . .. . ...|...
T Consensus 14 ~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i---~~~~L~v~~k--g-----~---~~-l-------------~g~L~~~ 66 (157)
T 2rh0_A 14 PWGQWYQTLEEVFIEVQVPPGTRAQDIQCGL---QSRHVALAVG--G-----R---EI-L-------------KGKLFDS 66 (157)
T ss_dssp SSEEEEECSSEEEEEEECCTTCCGGGEEEEE---CSSEEEEEET--T-----E---EE-E-------------EEEBSSC
T ss_pred CcEEEEecCCEEEEEEECCCCCcccceEEEE---ecCEEEEEEC--C-----E---EE-E-------------eeccccc
Confidence 4799999999999999998 89999999999 8899998762 0 0 01 1 3678899
Q ss_pred CCCCCceeEeCCCC-EEEEEEeccCC
Q 032436 111 VDPRLFHPQFRQDG-ILEGVVMKHRK 135 (141)
Q Consensus 111 vd~~~I~A~~~~dG-VL~I~vPK~~~ 135 (141)
|+++.-+-.++ +| .|+|+|-|.+.
T Consensus 67 I~~eeS~w~i~-~~k~v~I~L~K~~~ 91 (157)
T 2rh0_A 67 TIADEGTWTLE-DRKMVRIVLTKTKR 91 (157)
T ss_dssp BCGGGCEEEEE-CCCEEEEEEEBSSC
T ss_pred cCccccEEEEc-CCcEEEEEEEEcCC
Confidence 99999999999 88 59999999875
No 26
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=96.87 E-value=0.00071 Score=48.82 Aligned_cols=84 Identities=10% Similarity=0.076 Sum_probs=59.4
Q ss_pred cceeEEEcCCe-------EEEEEEcCCCCCCCeEEEEEeccCCEEEEEEEEeecccCCceeeEEEEeccccCCCeeEEEE
Q 032436 32 GLYDIGVSDKA-------YLFRVSLPGARKDTSNLKCIIRRNGNVQIQGVMTEGDVAKNSSKVYKMLQQQLCPPGEFTVS 104 (141)
Q Consensus 32 ~~vDi~Et~~~-------y~v~~dLPGv~kedi~V~ve~~~~~~L~I~G~~~~~~~~~~~~~~er~~~~~~~~~G~F~R~ 104 (141)
+.++++.+.+. +.|.+.+|+++ ++.|.+ ..+.|.+++.......+. - --.|.-.
T Consensus 7 p~~~W~Q~~~~~~~~k~~V~ltI~~~~~~--~~~V~~---~~~~l~~~~~~~~~~g~~-~-------------~~~y~~~ 67 (134)
T 2cg9_X 7 PQVAWAQRSSTTDPERNYVLITVSIADCD--APELTI---KPSYIELKAQSKPHVGDE-N-------------VHHYQLH 67 (134)
T ss_dssp ----CBCCCEEECCCSSEEEEECCCSSEE--SCCCCB---CSSEEEECCEEC---------------------CEEBCEE
T ss_pred CCEEEEeCCCCcCCcCCEEEEEEEecCCC--ceEEEE---ECCEEEEEEecccccCCc-c-------------CceEEEE
Confidence 46888888877 99999999984 777877 788999987642100000 0 0134557
Q ss_pred EECCCCCCCCCceeEeCCCCE-EEEEEeccCC
Q 032436 105 FSLPGPVDPRLFHPQFRQDGI-LEGVVMKHRK 135 (141)
Q Consensus 105 ~~LP~~vd~~~I~A~~~~dGV-L~I~vPK~~~ 135 (141)
+.|...|+++.-+..+. ++- ++|+|.|.+.
T Consensus 68 l~L~~~Idpe~S~~~v~-~~~~vei~L~K~~~ 98 (134)
T 2cg9_X 68 IDLYKEIIPEKTMHKVA-NGQHYFLKLYKKDL 98 (134)
T ss_dssp EECSSCCCSSSEEEEEC-CC--CEEEEEECSS
T ss_pred EEChhhccccccEEEEC-CCEEEEEEEEECCC
Confidence 89999999999999999 888 9999999873
No 27
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=96.42 E-value=0.0072 Score=44.41 Aligned_cols=77 Identities=16% Similarity=0.209 Sum_probs=61.2
Q ss_pred cceeEEEcCCeEEEEEEcCCCCCCCeEEEEEecc-CCEEEEEEEEeecccCCceeeEEEEeccccCCCeeEEEEEECCCC
Q 032436 32 GLYDIGVSDKAYLFRVSLPGARKDTSNLKCIIRR-NGNVQIQGVMTEGDVAKNSSKVYKMLQQQLCPPGEFTVSFSLPGP 110 (141)
Q Consensus 32 ~~vDi~Et~~~y~v~~dLPGv~kedi~V~ve~~~-~~~L~I~G~~~~~~~~~~~~~~er~~~~~~~~~G~F~R~~~LP~~ 110 (141)
+.++++.+.+.+.|.+.+|++ +++.|.+ . .+.|++++. . ... ..|.-.+.|=..
T Consensus 5 P~~~W~Qt~~~V~ltI~l~~~--~~v~V~~---~~~~~l~~~~~-~--~~~-----------------~~y~~~l~L~~~ 59 (150)
T 2kmw_A 5 PEVLWAQRSDKVYLTVALPDA--KDISVKC---EPQGLFSFSAL-G--AQG-----------------ERFEFSLELYGK 59 (150)
T ss_dssp CCEEEEECSSEEEEEECCSSE--EEEEECC---CTTEEEEEEEE-T--TTT-----------------EEEEEEEEBSSC
T ss_pred CcEEEEeCCCEEEEEEEeCCC--CceEEEE---ecCCEEEEEEE-c--CCC-----------------ceEEEEeEhhhc
Confidence 479999999999999999998 4677776 6 678999986 1 111 134557888899
Q ss_pred CCCCCceeEeCCCCEEEEEEeccCC
Q 032436 111 VDPRLFHPQFRQDGILEGVVMKHRK 135 (141)
Q Consensus 111 vd~~~I~A~~~~dGVL~I~vPK~~~ 135 (141)
|+++ -+.... ..-++|+|.|.++
T Consensus 60 Idpe-S~~~v~-~~kIei~L~K~e~ 82 (150)
T 2kmw_A 60 IMTE-YRKNVG-LRNIIFSIQKEER 82 (150)
T ss_dssp EEEE-EEEEEE-SSSEEEEEEECCS
T ss_pred cccc-ceEEec-CCEEEEEEEECCC
Confidence 9999 888888 7789999999764
No 28
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=77.63 E-value=3.3 Score=26.74 Aligned_cols=34 Identities=18% Similarity=0.271 Sum_probs=29.3
Q ss_pred eeEEEEEECCCCCCCCCceeEeCCCCEEEEEEeccC
Q 032436 99 GEFTVSFSLPGPVDPRLFHPQFRQDGILEGVVMKHR 134 (141)
Q Consensus 99 G~F~R~~~LP~~vd~~~I~A~~~~dGVL~I~vPK~~ 134 (141)
..|.-.+.||. ++.+.|+-.++ +|.|+|+--+.+
T Consensus 7 ~~~~v~~dlPG-~~~edi~V~v~-~~~L~I~g~~~~ 40 (85)
T 3q9p_A 7 DRWRVSLDVNH-FAPDELTVKTK-DGVVEITGKHAA 40 (85)
T ss_dssp CEEEEEEECTT-TCCSEEEEEEE-TTEEEEEEEEC-
T ss_pred CEEEEEEECCC-CChHHEEEEEE-CCEEEEEEEEcc
Confidence 46888999996 99999999999 999999976543
No 29
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=73.91 E-value=13 Score=26.19 Aligned_cols=44 Identities=14% Similarity=0.058 Sum_probs=33.9
Q ss_pred ceeEEEcC------CeEEEEEEcCCCCC-----CCeEEEEEeccCCEEEEEEEEe
Q 032436 33 LYDIGVSD------KAYLFRVSLPGARK-----DTSNLKCIIRRNGNVQIQGVMT 76 (141)
Q Consensus 33 ~vDi~Et~------~~y~v~~dLPGv~k-----edi~V~ve~~~~~~L~I~G~~~ 76 (141)
.+.|++.+ +.++=.+.|.|+.+ ..|+|.++++.+|.|.|++...
T Consensus 48 ~i~v~qGe~~~~~~n~~lg~~~l~gipp~p~G~~~I~V~f~id~nGiL~V~a~d~ 102 (152)
T 2op6_A 48 SIVIYEGERPMVMDNHKLGNFDVTGIPPAPRGVPQIEVTFEIDVNGILHVSAEDK 102 (152)
T ss_dssp EEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCSCEEEEEEECTTSCEEEEEEET
T ss_pred EEEEEEeCCccCccCCEeEEEEEECCCCCCCCCceEEEEEEECCCcEEEEEEEEe
Confidence 56777754 56677788887754 2589999999999999999743
No 30
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=73.56 E-value=15 Score=26.28 Aligned_cols=44 Identities=14% Similarity=0.217 Sum_probs=34.7
Q ss_pred ceeEEEc------CCeEEEEEEcCCCCCC-----CeEEEEEeccCCEEEEEEEEe
Q 032436 33 LYDIGVS------DKAYLFRVSLPGARKD-----TSNLKCIIRRNGNVQIQGVMT 76 (141)
Q Consensus 33 ~vDi~Et------~~~y~v~~dLPGv~ke-----di~V~ve~~~~~~L~I~G~~~ 76 (141)
.+.||+. ++.++=.+.|.|+.+- .|+|.++++.+|.|.|++...
T Consensus 48 ~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~~I~Vtf~iD~nGiL~V~a~d~ 102 (152)
T 3h0x_A 48 MIKVYEGERAMSKDNNLLGKFELTGIPPAPRGVPQIEVTFALDANGILKVSATDK 102 (152)
T ss_dssp EEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCSCEEEEEEECTTSEEEEEEEET
T ss_pred eeeEEEcCccccccCcEEEEEEEeCCCCCCCCCceEEEEEEEcCCCEEEEEEEEc
Confidence 5667774 4567778888888652 599999999999999999864
No 31
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=71.98 E-value=6.5 Score=26.00 Aligned_cols=32 Identities=9% Similarity=0.171 Sum_probs=26.7
Q ss_pred eEEEEEEcC-CCCCCCeEEEEEeccCCEEEEEEEEe
Q 032436 42 AYLFRVSLP-GARKDTSNLKCIIRRNGNVQIQGVMT 76 (141)
Q Consensus 42 ~y~v~~dLP-Gv~kedi~V~ve~~~~~~L~I~G~~~ 76 (141)
.|.-.+.|| +++.+.++-++ .||.|+|.-.+.
T Consensus 62 ~f~R~~~LP~~vd~~~i~A~~---~~GvL~I~lpK~ 94 (102)
T 4fei_A 62 RFVRELAFPEPVRPASGVASL---AGGVLTVRFEKL 94 (102)
T ss_dssp EEEEEEECSSCBCTTCCEEEE---ETTEEEEEEEBS
T ss_pred EEEEEEECCCCcchhHcEEEE---ECCEEEEEEEcc
Confidence 455577899 69999999998 899999998765
No 32
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=70.36 E-value=13 Score=26.62 Aligned_cols=44 Identities=16% Similarity=0.117 Sum_probs=33.5
Q ss_pred ceeEEEc------CCeEEEEEEcCCCCC-----CCeEEEEEeccCCEEEEEEEEe
Q 032436 33 LYDIGVS------DKAYLFRVSLPGARK-----DTSNLKCIIRRNGNVQIQGVMT 76 (141)
Q Consensus 33 ~vDi~Et------~~~y~v~~dLPGv~k-----edi~V~ve~~~~~~L~I~G~~~ 76 (141)
.+.||+. ++.++=.+.|.|+.+ ..|+|.++++.+|.|.|++...
T Consensus 48 ~I~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~~IeVtf~iD~nGiL~Vsa~d~ 102 (152)
T 3dob_A 48 SIQVYEGERAMTRDNHRLGTFELSGIPPAPRGVPQIEVTFNIDANGILNVSAEDK 102 (152)
T ss_dssp EEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCCCEEEEEEECTTCCEEEEEEET
T ss_pred EEEEEEcCccccccCceeEEEEEeCCCCCCCCCceEEEEEEeCCCCeEEEEEEEc
Confidence 4566764 456677788877764 2599999999999999999864
No 33
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=69.42 E-value=16 Score=25.53 Aligned_cols=44 Identities=11% Similarity=0.110 Sum_probs=34.6
Q ss_pred ceeEEEcC------CeEEEEEEcCCCCC-----CCeEEEEEeccCCEEEEEEEEe
Q 032436 33 LYDIGVSD------KAYLFRVSLPGARK-----DTSNLKCIIRRNGNVQIQGVMT 76 (141)
Q Consensus 33 ~vDi~Et~------~~y~v~~dLPGv~k-----edi~V~ve~~~~~~L~I~G~~~ 76 (141)
.+.|+|.+ +.++=.+.|.|+.+ ..|+|.++++.+|.|.|++...
T Consensus 65 ~I~VyqGe~~~~~~n~~Lg~f~l~gipp~p~G~~~IeVtf~iD~nGiL~V~a~d~ 119 (135)
T 1q5l_A 65 TIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDK 119 (135)
T ss_dssp EEEEEECCSSSCSSSEEEEEEECCCCCSCCSSSCCEEEEEEECTTSEEEEEEEET
T ss_pred EEEEEEeCCcccccCcEEEEEEEeCCCCCCCceeEEEEEEEECCCCEEEEEEEEC
Confidence 57777753 56777888888764 2599999999999999999754
No 34
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=69.09 E-value=8.6 Score=25.06 Aligned_cols=31 Identities=29% Similarity=0.359 Sum_probs=26.6
Q ss_pred eEEEEEEcCC-CCCCCeEEEEEeccCCEEEEEEEE
Q 032436 42 AYLFRVSLPG-ARKDTSNLKCIIRRNGNVQIQGVM 75 (141)
Q Consensus 42 ~y~v~~dLPG-v~kedi~V~ve~~~~~~L~I~G~~ 75 (141)
.|.-.+.||. ++.+.++-++ .||.|+|.-.+
T Consensus 65 ~f~r~~~LP~~vd~~~i~A~~---~~GvL~I~~pK 96 (100)
T 3gla_A 65 SFHRRFALPDSADADGITAAG---RNGVLEIRIPK 96 (100)
T ss_dssp EEEEEEECCTTBCTTSCEEEE---ETTEEEEEEEB
T ss_pred EEEEEEECCCCcChHHeEEEE---eCCEEEEEEec
Confidence 5777899995 9999999998 89999998754
No 35
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=68.18 E-value=18 Score=25.80 Aligned_cols=44 Identities=18% Similarity=0.115 Sum_probs=32.7
Q ss_pred ceeEEEc------CCeEEEEEEcCCCCC-----CCeEEEEEeccCCEEEEEEEEe
Q 032436 33 LYDIGVS------DKAYLFRVSLPGARK-----DTSNLKCIIRRNGNVQIQGVMT 76 (141)
Q Consensus 33 ~vDi~Et------~~~y~v~~dLPGv~k-----edi~V~ve~~~~~~L~I~G~~~ 76 (141)
.+.||+. ++.++=.+.|.|+.+ ..|+|.++++.+|.|.|++...
T Consensus 48 ~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~~IeVtf~iD~nGiL~Vsa~d~ 102 (151)
T 3dqg_A 48 QIKVFQGEREMATSNKLLGQFSLVGIPPAPRGVPQVEVTFDIDANGIVNVSARDR 102 (151)
T ss_dssp EEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCSCEEEEEEECTTSEEEEEEEET
T ss_pred EEEEEEcCCcccccCcEEEEEEEeCCCCCCCCCcEEEEEEEeccCcEEEEEEEEc
Confidence 4566764 345666777766654 2599999999999999999864
No 36
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=67.31 E-value=6.3 Score=25.53 Aligned_cols=33 Identities=12% Similarity=0.227 Sum_probs=28.7
Q ss_pred eeEEEEEECCCCCCCCCceeEeCCCCEEEEEEecc
Q 032436 99 GEFTVSFSLPGPVDPRLFHPQFRQDGILEGVVMKH 133 (141)
Q Consensus 99 G~F~R~~~LP~~vd~~~I~A~~~~dGVL~I~vPK~ 133 (141)
..|.-.+.||. ++.+.|+-.+. +|.|+|+--+.
T Consensus 6 ~~~~v~~dlPG-~~~edi~V~v~-~~~L~I~g~~~ 38 (90)
T 2y1y_A 6 DRFSVNLDVKH-FSPEELKVKVL-GDVIEVHGKHE 38 (90)
T ss_dssp CCEEEEEECTT-SCGGGEEEEEE-TTEEEEEEEEE
T ss_pred CEEEEEEECCC-CcHHHeEEEEE-CCEEEEEEEEe
Confidence 46888999995 99999999999 99999987654
No 37
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=65.56 E-value=7.5 Score=26.05 Aligned_cols=33 Identities=9% Similarity=0.166 Sum_probs=28.9
Q ss_pred CeeEEEEEECCCCCCCCCceeEeCCCCEEEEEEec
Q 032436 98 PGEFTVSFSLPGPVDPRLFHPQFRQDGILEGVVMK 132 (141)
Q Consensus 98 ~G~F~R~~~LP~~vd~~~I~A~~~~dGVL~I~vPK 132 (141)
-..|.-.+.||. ++.+.|+-.+. +|.|+|+--+
T Consensus 11 ~~~~~v~~dlPG-~~~edi~V~v~-~~~L~I~g~~ 43 (106)
T 3l1e_A 11 RDKFVIFLDVKH-FSPEDLTVKVQ-EDFVEIHGKH 43 (106)
T ss_dssp SSEEEEEEECTT-SCGGGEEEEEE-TTEEEEEEEE
T ss_pred CCEEEEEEECCC-CChHHEEEEEE-CCEEEEEEEE
Confidence 457888999996 99999999999 9999999754
No 38
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=64.82 E-value=22 Score=26.23 Aligned_cols=44 Identities=16% Similarity=0.138 Sum_probs=33.8
Q ss_pred ceeEEEcC------CeEEEEEEcCCCCC-----CCeEEEEEeccCCEEEEEEEEe
Q 032436 33 LYDIGVSD------KAYLFRVSLPGARK-----DTSNLKCIIRRNGNVQIQGVMT 76 (141)
Q Consensus 33 ~vDi~Et~------~~y~v~~dLPGv~k-----edi~V~ve~~~~~~L~I~G~~~ 76 (141)
.+.||+.+ +.++=.+.|.|+.+ ..|+|.++++.+|.|.|++...
T Consensus 68 ~I~VyqGE~~~~~dn~~LG~f~l~gipp~p~G~~~IeVtf~iD~nGiL~VsA~d~ 122 (182)
T 3n8e_A 68 EIKVCQGEREMAGDNKLLGQFTLIGIPPAPRGVPQIEVTFDIDANGIVHVSAKDK 122 (182)
T ss_dssp EEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCSCEEEEEEECTTCCEEEEEEET
T ss_pred EEEEEEcCccccccCceEEEEEEcCCCCCCCCCeeEEEEEEEecCCEEEEEEEEc
Confidence 56677744 45677788877764 2499999999999999999854
No 39
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=63.29 E-value=7.9 Score=25.68 Aligned_cols=34 Identities=15% Similarity=0.181 Sum_probs=29.2
Q ss_pred eeEEEEEECCCCCCCCCceeEeCCCCEEEEEEeccC
Q 032436 99 GEFTVSFSLPGPVDPRLFHPQFRQDGILEGVVMKHR 134 (141)
Q Consensus 99 G~F~R~~~LP~~vd~~~I~A~~~~dGVL~I~vPK~~ 134 (141)
..|.-.+.||. ++.+.|+-.+. +|.|+|+--+..
T Consensus 11 ~~~~v~~dlPG-~~~edI~V~v~-~~~L~I~g~~~~ 44 (101)
T 2wj5_A 11 GYFSVLLDVKH-FSPEEISVKVV-GDHVEVHARHEE 44 (101)
T ss_dssp SCEEEEEECTT-SCGGGEEEEEE-TTEEEEEEEEEE
T ss_pred CEEEEEEECCC-CcHHHeEEEEE-CCEEEEEEEEec
Confidence 46888899995 99999999999 999999876643
No 40
>2cql_A OK/SW-CL.103, 60S ribosomal protein L9; N-terminal domain, alpha and beta (A+B), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.141.1.1
Probab=61.04 E-value=8.3 Score=26.07 Aligned_cols=17 Identities=12% Similarity=0.380 Sum_probs=14.8
Q ss_pred CCeEEEEEeccCCEEEEEEE
Q 032436 55 DTSNLKCIIRRNGNVQIQGV 74 (141)
Q Consensus 55 edi~V~ve~~~~~~L~I~G~ 74 (141)
++++|++ +++.++|+|.
T Consensus 21 ~gV~V~i---~~~~VtVKGP 37 (100)
T 2cql_A 21 ENVDITL---KGRTVIVKGP 37 (100)
T ss_dssp SSCEEEE---ETTEEEEEET
T ss_pred CCCEEEE---eCCEEEEECC
Confidence 6788988 8899999995
No 41
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=60.27 E-value=32 Score=25.99 Aligned_cols=44 Identities=11% Similarity=0.147 Sum_probs=33.7
Q ss_pred ceeEEEcC------CeEEEEEEcCCCCC-----CCeEEEEEeccCCEEEEEEEEe
Q 032436 33 LYDIGVSD------KAYLFRVSLPGARK-----DTSNLKCIIRRNGNVQIQGVMT 76 (141)
Q Consensus 33 ~vDi~Et~------~~y~v~~dLPGv~k-----edi~V~ve~~~~~~L~I~G~~~ 76 (141)
.+.|++.+ +.++=.+.|.|+.+ ..|+|+++++.+|.|.|++...
T Consensus 46 ~i~v~qGe~~~~~~n~~Lg~f~l~gi~~~p~G~~~I~Vtf~iD~nGiL~V~a~d~ 100 (227)
T 1u00_A 46 SIHVMQGERELVQDCRSLARFALRGIPALPAGGAHIRVTFQVDADGLLSVTAMEK 100 (227)
T ss_dssp EEEEEECSSSBGGGSEEEEEEEECCCCCCSTTCSCEEEEEEECTTCCEEEEEEET
T ss_pred EEEEEecCCccCCCCCEEEEEEEeCCCCCCCCceEEEEEEEECCCCcEEEEeecc
Confidence 56777754 56677788887754 2599999999999999998743
No 42
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=57.81 E-value=17 Score=24.63 Aligned_cols=36 Identities=14% Similarity=0.101 Sum_probs=31.1
Q ss_pred CeeEEEEEECCCCCCCCCceeEeCCC-CEEEEEEeccCC
Q 032436 98 PGEFTVSFSLPGPVDPRLFHPQFRQD-GILEGVVMKHRK 135 (141)
Q Consensus 98 ~G~F~R~~~LP~~vd~~~I~A~~~~d-GVL~I~vPK~~~ 135 (141)
-..|.-.+.||. ++.+.|+-.+. + |.|+|+--+...
T Consensus 33 ~~~~~v~~~lPG-~~~edi~V~v~-~~~~L~I~g~~~~~ 69 (123)
T 3aab_A 33 GGYLVVVADLAG-FNKEKIKARVS-GQNELIIEAEREIT 69 (123)
T ss_dssp TTEEEEEEECCS-CCGGGCEEEEE-TTTEEEEEEECCCC
T ss_pred CCEEEEEEECCC-CCHHHEEEEEe-CCCEEEEEEEEecc
Confidence 467888999996 89999999999 8 999999876543
No 43
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=55.92 E-value=14 Score=26.32 Aligned_cols=35 Identities=20% Similarity=0.091 Sum_probs=30.1
Q ss_pred CeeEEEEEECCCCCCCCCceeEeCCCCEEEEEEeccC
Q 032436 98 PGEFTVSFSLPGPVDPRLFHPQFRQDGILEGVVMKHR 134 (141)
Q Consensus 98 ~G~F~R~~~LP~~vd~~~I~A~~~~dGVL~I~vPK~~ 134 (141)
-..|.-.+.||. ++.+.|+-.++ +|.|+|+--+..
T Consensus 65 ~~~~~v~~dlPG-~~~edi~V~~~-~~~L~I~g~~~~ 99 (161)
T 4eld_A 65 DQHIKVIAWLPG-VNKEDIILNAV-GDTLEIRAKRSP 99 (161)
T ss_dssp SSEEEEEEECTT-CCGGGEEEEEE-TTEEEEEEECCC
T ss_pred CCEEEEEEECCC-CChHhEEEEEE-CCEEEEEEEEcc
Confidence 356788899997 89999999999 999999977655
No 44
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=54.33 E-value=15 Score=26.18 Aligned_cols=33 Identities=15% Similarity=0.186 Sum_probs=28.1
Q ss_pred CeEEEEEEcC-CCCCCCeEEEEEeccCCEEEEEEEEe
Q 032436 41 KAYLFRVSLP-GARKDTSNLKCIIRRNGNVQIQGVMT 76 (141)
Q Consensus 41 ~~y~v~~dLP-Gv~kedi~V~ve~~~~~~L~I~G~~~ 76 (141)
..|.-.+.|| +|+.+.|+-++ .+|.|+|.-.+.
T Consensus 104 g~F~R~~~LP~~vd~~~i~A~~---~nGvL~I~lPK~ 137 (151)
T 1gme_A 104 GKFVRRFRLLEDAKVEEVKAGL---ENGVLTVTVPKA 137 (151)
T ss_dssp CCEEEEEECSSCCCGGGCEEEE---ETTEEEEEEECC
T ss_pred cEEEEEEECCCCccccceEEEE---ECCEEEEEEEcc
Confidence 4577788999 69999999988 899999998765
No 45
>2ayh_A 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolase (glucanase); 1.60A {Hybrid} SCOP: b.29.1.2 PDB: 1byh_A 1glh_A 1u0a_A* 1mac_A 1gbg_A
Probab=53.85 E-value=53 Score=24.13 Aligned_cols=41 Identities=12% Similarity=0.126 Sum_probs=26.9
Q ss_pred cC-CEEEEEEEEeecccCCceeeEEEEeccccCCCeeEEEEEECCC
Q 032436 65 RN-GNVQIQGVMTEGDVAKNSSKVYKMLQQQLCPPGEFTVSFSLPG 109 (141)
Q Consensus 65 ~~-~~L~I~G~~~~~~~~~~~~~~er~~~~~~~~~G~F~R~~~LP~ 109 (141)
.+ |.|.|+..+... ..+ ..-|.+.+..+.||.|+-+++||.
T Consensus 42 ~~~G~L~i~~~~~~~---~~~-~s~~i~S~~~f~yG~~E~r~k~p~ 83 (214)
T 2ayh_A 42 TNDGKLKLGLTSSAY---NKF-DCAEYRSTNIYGYGLYEVSMKPAK 83 (214)
T ss_dssp CTTSCEEEEEEEEET---TEE-EEEEEEESSCBCSEEEEEEEECCC
T ss_pred cCCCEEEEEEecCCC---Cce-eeEEEEECCeEeeEEEEEEEEcCC
Confidence 56 999999876532 112 122333344567999999999995
No 46
>1rl6_A Protein (ribosomal protein L6); RNA-binding protein, gentamicin resistance, alpha/beta protein; 2.00A {Geobacillus stearothermophilus} SCOP: d.141.1.1 d.141.1.1 PDB: 1giy_H 1ml5_h* 1c04_B 1yl3_H 2b66_H 2b9n_H 2b9p_H 1eg0_J 487d_J
Probab=52.57 E-value=26 Score=25.97 Aligned_cols=45 Identities=13% Similarity=0.223 Sum_probs=32.6
Q ss_pred CCeEEEEEeccCCEEEEEEEEeecccCCceeeEEEEeccccCCCeeEEEEEECCCCCCCCCceeEeCCCCEEEEEEecc
Q 032436 55 DTSNLKCIIRRNGNVQIQGVMTEGDVAKNSSKVYKMLQQQLCPPGEFTVSFSLPGPVDPRLFHPQFRQDGILEGVVMKH 133 (141)
Q Consensus 55 edi~V~ve~~~~~~L~I~G~~~~~~~~~~~~~~er~~~~~~~~~G~F~R~~~LP~~vd~~~I~A~~~~dGVL~I~vPK~ 133 (141)
++++|++ +++.++|+|. -|+.+|.| |.. |+...+ ||.|.++.|..
T Consensus 12 ~gV~V~i---~~~~VtVkGp-----------------------kG~L~~~~--~~~-----v~i~~~-~~~l~v~~~~~ 56 (177)
T 1rl6_A 12 AGVTVTV---NGNTVTVKGP-----------------------KGELTRTF--HPD-----MTITVE-GNVITVTRPSD 56 (177)
T ss_dssp TTCEEEE---ETTEEEEEET-----------------------TEEEEEEC--CTT-----CEEEEE-TTEEEEECSCC
T ss_pred CCCEEEE---eCCEEEEECC-----------------------CeEEEEEc--CCC-----EEEEEe-CCEEEEEcCCC
Confidence 6788888 8899999995 46666655 443 455678 99988876544
No 47
>3juu_A Porphyranase B; glycoside hydrolase family GH16, beta-sandwich fold, jelly roll, sugar binding protein, hydrolase-carbohydrate complex; HET: MES GOL; 1.80A {Zobellia galactanivorans}
Probab=51.29 E-value=40 Score=26.40 Aligned_cols=52 Identities=13% Similarity=0.064 Sum_probs=32.7
Q ss_pred CCCeEEEEEeccCCEEEEEEEEeecc---cCCcee-eEEEEeccccCCCeeEEEEEECCCC
Q 032436 54 KDTSNLKCIIRRNGNVQIQGVMTEGD---VAKNSS-KVYKMLQQQLCPPGEFTVSFSLPGP 110 (141)
Q Consensus 54 kedi~V~ve~~~~~~L~I~G~~~~~~---~~~~~~-~~er~~~~~~~~~G~F~R~~~LP~~ 110 (141)
++++. + .+|.|+|.+.+.... ....+. ..-|.+.+..+.||.|+-+++||..
T Consensus 64 ~~nv~--v---~~G~L~I~a~~~~~~~~~~g~~~~~~sg~i~s~~~~~yG~~E~r~k~p~g 119 (280)
T 3juu_A 64 AENIS--L---NNGSLQITTTMLPEPIVKNNKTYTHGGGYVGSRNGMTYGYYECEMKANKT 119 (280)
T ss_dssp GGGEE--E---ETTEEEEECEEEEEEEEETTEEEEEEEEEEEESSCBSSEEEEEEEECCSS
T ss_pred hhheE--E---ECCEEEEEEEcCCCccccCCCeEEEEEEEEEEecceeCEEEEEEEEcCCC
Confidence 45554 4 689999999875211 111121 1234444556679999999999973
No 48
>1nkw_E 50S ribosomal protein L6; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1sm1_E*
Probab=50.32 E-value=33 Score=26.27 Aligned_cols=46 Identities=15% Similarity=0.218 Sum_probs=32.2
Q ss_pred CCCeEEEEEeccCCEEEEEEEEeecccCCceeeEEEEeccccCCCeeEEEEEECCCCCCCCCceeEeCCCCEEEEEEecc
Q 032436 54 KDTSNLKCIIRRNGNVQIQGVMTEGDVAKNSSKVYKMLQQQLCPPGEFTVSFSLPGPVDPRLFHPQFRQDGILEGVVMKH 133 (141)
Q Consensus 54 kedi~V~ve~~~~~~L~I~G~~~~~~~~~~~~~~er~~~~~~~~~G~F~R~~~LP~~vd~~~I~A~~~~dGVL~I~vPK~ 133 (141)
+++++|++ +++.++|+|. -|+.++.| +.. |+...+ ||.|.|+.+..
T Consensus 39 P~gV~V~i---~~~~VtVKGP-----------------------kG~L~~~~--~~~-----v~i~~e-~~~i~v~~~~~ 84 (212)
T 1nkw_E 39 PSGVTVNA---QDGVFKVKGP-----------------------KGELTVPY--NTE-----LTVRQD-GDQLLVERPSD 84 (212)
T ss_pred CCCcEEEE---eCCEEEEECC-----------------------CEEEEEEC--CCC-----eEEEEE-CCEEEEEcCCC
Confidence 37788888 7899999996 35555555 433 455677 88888876654
No 49
>2nwt_A UPF0165 protein AF_2212; HOMO dimer protein, GFT structural genomics, PSI-2, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: b.129.2.2
Probab=49.02 E-value=9.1 Score=24.51 Aligned_cols=13 Identities=8% Similarity=0.675 Sum_probs=11.3
Q ss_pred CCceeEeCCCCEEE
Q 032436 114 RLFHPQFRQDGILE 127 (141)
Q Consensus 114 ~~I~A~~~~dGVL~ 127 (141)
..|.|.|+ ||||.
T Consensus 3 k~IeAiYE-nGVfk 15 (69)
T 2nwt_A 3 KIIEAVYE-NGVFK 15 (69)
T ss_dssp CCEEEEEE-TTEEE
T ss_pred ceEEEEEE-CCEEe
Confidence 35899999 99996
No 50
>3j21_F 50S ribosomal protein L6P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=48.45 E-value=30 Score=25.83 Aligned_cols=51 Identities=20% Similarity=0.219 Sum_probs=34.8
Q ss_pred EEEEEcCCCCCCCeEEEEEeccCCEEEEEEEEeecccCCceeeEEEEeccccCCCeeEEEEEECCCCCCCCCceeEeCCC
Q 032436 44 LFRVSLPGARKDTSNLKCIIRRNGNVQIQGVMTEGDVAKNSSKVYKMLQQQLCPPGEFTVSFSLPGPVDPRLFHPQFRQD 123 (141)
Q Consensus 44 ~v~~dLPGv~kedi~V~ve~~~~~~L~I~G~~~~~~~~~~~~~~er~~~~~~~~~G~F~R~~~LP~~vd~~~I~A~~~~d 123 (141)
.-.+++| ++++|++ .++.++|+|. -|+.+|.|+-| .++-.++ +
T Consensus 8 ~~~I~IP----~gV~v~i---~~~~V~VkGp-----------------------kG~L~~~~~~~------~v~i~~~-~ 50 (184)
T 3j21_F 8 REEVEIP----EGVEVTV---EGYKVKVKGP-----------------------KGELEREFFWP------GIQIFTE-D 50 (184)
T ss_dssp EEEEECC----SSCEEEE---SSSEEEEECS-----------------------SCEEEEECCCT------TCEEEEE-T
T ss_pred eEEEeCC----CCcEEEE---eCCEEEEEcC-----------------------CeEEEEEecCC------cEEEEEe-C
Confidence 3456666 7889988 8899999995 45555555422 2455677 8
Q ss_pred CEEEEEEe
Q 032436 124 GILEGVVM 131 (141)
Q Consensus 124 GVL~I~vP 131 (141)
+.|.|..+
T Consensus 51 ~~l~v~~~ 58 (184)
T 3j21_F 51 GNVVIYKD 58 (184)
T ss_dssp TEEEEECS
T ss_pred CEEEEEEC
Confidence 88888753
No 51
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=47.65 E-value=33 Score=25.91 Aligned_cols=44 Identities=11% Similarity=0.110 Sum_probs=32.2
Q ss_pred ceeEEEcC------CeEEEEEEcCCCCC-----CCeEEEEEeccCCEEEEEEEEe
Q 032436 33 LYDIGVSD------KAYLFRVSLPGARK-----DTSNLKCIIRRNGNVQIQGVMT 76 (141)
Q Consensus 33 ~vDi~Et~------~~y~v~~dLPGv~k-----edi~V~ve~~~~~~L~I~G~~~ 76 (141)
.+.||+.+ +.++=.+.|.|+.+ ..|+|+++++.+|.|.|++...
T Consensus 49 ~I~VyqGe~~~~~dn~~Lg~f~l~gipp~p~G~~~IeVtf~iD~nGiL~V~a~d~ 103 (219)
T 4e81_A 49 TIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDK 103 (219)
T ss_dssp EEEEEESSCSBGGGSEEEEEEEEECCCCCSTTCSCEEEEEEECTTCCEEEEEEET
T ss_pred EEEEEEcCCcccccCCEEEEEEEeCCCCCCCCCceEEEEEEeCCCCCEeeeeecc
Confidence 56677754 34566667766654 2599999999999999999864
No 52
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=45.77 E-value=23 Score=23.47 Aligned_cols=34 Identities=15% Similarity=0.207 Sum_probs=28.2
Q ss_pred CCeEEEEEEcCC-CCCCCeEEEEEeccCCEEEEEEEEe
Q 032436 40 DKAYLFRVSLPG-ARKDTSNLKCIIRRNGNVQIQGVMT 76 (141)
Q Consensus 40 ~~~y~v~~dLPG-v~kedi~V~ve~~~~~~L~I~G~~~ 76 (141)
+..|.+.++|+| +.+++....+ .++.|.|.=...
T Consensus 53 ~~~y~~~~~L~~~I~~e~s~~~~---~~~~l~i~L~K~ 87 (114)
T 1rl1_A 53 GEDYNLKLELLHPIIPEQSTFKV---LSTKIEIKLKKP 87 (114)
T ss_dssp SSEEEEEECBSSCCCGGGEEEEE---CSSSEEEEEECS
T ss_pred CcEEEEEeeCCCcCCccccEEEE---ECCEEEEEEEcC
Confidence 568999999998 8889999888 788888876543
No 53
>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus}
Probab=45.01 E-value=50 Score=25.13 Aligned_cols=49 Identities=12% Similarity=0.217 Sum_probs=29.2
Q ss_pred CCCeEEEEEeccCCEEEEEEEEeecccCCceeeEEEEec--cccCCCeeEEEEEECCC
Q 032436 54 KDTSNLKCIIRRNGNVQIQGVMTEGDVAKNSSKVYKMLQ--QQLCPPGEFTVSFSLPG 109 (141)
Q Consensus 54 kedi~V~ve~~~~~~L~I~G~~~~~~~~~~~~~~er~~~--~~~~~~G~F~R~~~LP~ 109 (141)
++++. + ++|.|+|.+.+..-.. ..+ ..-|... ...+.||.|+-+++||.
T Consensus 46 ~~nv~--v---~~G~L~i~~~~~~~~~-~~~-tS~~i~t~~~~~~~yG~~e~r~k~p~ 96 (251)
T 3iln_A 46 IENAR--V---GGGVLIIEARRESYEG-REY-TSARLVTRGKASWTYGRFEIRARLPS 96 (251)
T ss_dssp TTTEE--E---ETTEEEEEEEEEEETT-EEE-EECEEECTTTCCBSSEEEEEEEECCC
T ss_pred CcCEE--E---ECCEEEEEEEeccCCC-CCE-EEEEEEECCcccccceEEEEEEEccC
Confidence 56554 4 6899999997652101 111 1122222 23456999999999996
No 54
>1vq8_E 50S ribosomal protein L6P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.141.1.1 d.141.1.1 PDB: 1vq4_E* 1vq5_E* 1vq6_E* 1vq7_E* 1s72_E* 1vq9_E* 1vqk_E* 1vql_E* 1vqm_E* 1vqn_E* 1vqo_E* 1vqp_E* 1yhq_E* 1yi2_E* 1yij_E* 1yit_E* 1yj9_E* 1yjn_E* 1yjw_E* 2otj_E* ...
Probab=44.88 E-value=37 Score=25.23 Aligned_cols=46 Identities=7% Similarity=-0.009 Sum_probs=32.5
Q ss_pred CCeEEEEEeccCCEEEEEEEEeecccCCceeeEEEEeccccCCCeeEEEEEECCCCCCCCCceeEeCCCCEEEEEEecc
Q 032436 55 DTSNLKCIIRRNGNVQIQGVMTEGDVAKNSSKVYKMLQQQLCPPGEFTVSFSLPGPVDPRLFHPQFRQDGILEGVVMKH 133 (141)
Q Consensus 55 edi~V~ve~~~~~~L~I~G~~~~~~~~~~~~~~er~~~~~~~~~G~F~R~~~LP~~vd~~~I~A~~~~dGVL~I~vPK~ 133 (141)
++++|++ +++.++|+|. -|+.+|.|. +. .++-..+ ||.|.+..|..
T Consensus 10 ~gV~v~i---~~~~vtVkGp-----------------------kG~L~~~~~-~~-----~v~i~~~-~~~i~v~~~~~ 55 (178)
T 1vq8_E 10 EDVDAEQ---DHLDITVEGD-----------------------NGSVTRRLW-YP-----DIDVSVD-GDTVVIESDED 55 (178)
T ss_dssp TTCEEEE---ETTEEEEEET-----------------------TEEEEEECC-CT-----TCEEEEE-TTEEEEECSCC
T ss_pred CCCEEEE---eCCEEEEECC-----------------------CeEEEEEEE-CC-----eEEEEEE-CCEEEEEcCCC
Confidence 6788888 8899999995 455655553 22 3456678 89888876654
No 55
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=44.33 E-value=20 Score=26.37 Aligned_cols=33 Identities=12% Similarity=0.227 Sum_probs=28.3
Q ss_pred eeEEEEEECCCCCCCCCceeEeCCCCEEEEEEecc
Q 032436 99 GEFTVSFSLPGPVDPRLFHPQFRQDGILEGVVMKH 133 (141)
Q Consensus 99 G~F~R~~~LP~~vd~~~I~A~~~~dGVL~I~vPK~ 133 (141)
..|.-.+.||. ++.+.|+-++. +|.|+|+--+.
T Consensus 73 d~~~v~~dlPG-~~~edI~V~v~-~~~L~I~g~~~ 105 (175)
T 2klr_A 73 DRFSVNLDVKH-FSPEELKVKVL-GDVIEVHGKHE 105 (175)
T ss_dssp SEEEEEECCSS-CCGGGEEEEEE-TTEEEEEEEEE
T ss_pred CeEEEEEECCC-CChHHEEEEEE-CCEEEEEEEEc
Confidence 46777899995 99999999999 99999987553
No 56
>3i4i_A 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 1.89A {Uncultured murine large bowel bacteriuorganism_taxid}
Probab=43.25 E-value=1.1e+02 Score=23.29 Aligned_cols=44 Identities=9% Similarity=0.033 Sum_probs=27.8
Q ss_pred cCCEEEEEEEEeecccCCceeeEEEEeccccCCCeeEEEEEECCC
Q 032436 65 RNGNVQIQGVMTEGDVAKNSSKVYKMLQQQLCPPGEFTVSFSLPG 109 (141)
Q Consensus 65 ~~~~L~I~G~~~~~~~~~~~~~~er~~~~~~~~~G~F~R~~~LP~ 109 (141)
.+|.|+|++.+........+. .-|.+.+..+.||.|+-+++||.
T Consensus 60 ~~G~L~l~~~~~~~~~~~~~t-s~~i~S~~~~~yG~~e~r~K~~~ 103 (234)
T 3i4i_A 60 KDGILNLSITDDMPSSSKPYA-GAEYRTRDKFGYGLYQVRMKPAK 103 (234)
T ss_dssp ETTEEEEEEEECCTTCSSSEE-EEEEEESSCBCSEEEEEEEECCC
T ss_pred ECCEEEEEEEccCCCCCCCEE-EEEEEEeCceeCEEEEEEEEecC
Confidence 579999998764211112222 22333444467999999999985
No 57
>2hyk_A Beta-1,3-glucanase; family 16, beta-jelly roll, bacterial endo-beta-1,3-glucanas hydrolase; 1.30A {Nocardiopsis SP} PDB: 3atg_A
Probab=40.87 E-value=74 Score=23.81 Aligned_cols=48 Identities=21% Similarity=0.266 Sum_probs=29.3
Q ss_pred CCCeEEEEEeccCCEEEEEEEEeecccCCceeeEEEEeccc--cCCCeeEEEEEECCC
Q 032436 54 KDTSNLKCIIRRNGNVQIQGVMTEGDVAKNSSKVYKMLQQQ--LCPPGEFTVSFSLPG 109 (141)
Q Consensus 54 kedi~V~ve~~~~~~L~I~G~~~~~~~~~~~~~~er~~~~~--~~~~G~F~R~~~LP~ 109 (141)
++++.|+ .+|.|.|++.+... ..+ ..-|.+.++ .+.+|.|+-+++||.
T Consensus 49 ~~n~~v~----~~G~L~I~~~~~~~---~~~-~S~~i~S~~~f~~~yG~~E~r~klp~ 98 (245)
T 2hyk_A 49 RANSALD----GNGNLVITARQEAD---GGY-TSARLTTQNKVQPQYGRVEASIQIPR 98 (245)
T ss_dssp TTTEEEC----SSSCEEEEEEECTT---SCE-EECEEECTTTCCCCSEEEEEEEECCC
T ss_pred ccceEEe----cCCEEEEEEEecCC---CCE-EEEEEEccCcccccCCeEEEEEEcCC
Confidence 5666431 34999999876531 111 222333333 456899999999996
No 58
>4ate_A Beta-porphyranase A; hydrolase, AGAR degradation; 1.10A {Zobellia galactanivorans} PDB: 3ilf_A*
Probab=40.63 E-value=49 Score=25.77 Aligned_cols=49 Identities=10% Similarity=0.209 Sum_probs=28.9
Q ss_pred CCCeEEEEEeccCCEEEEEEEEeeccc-------CCceeeEEEEeccccCCCe-eEEEEEECC
Q 032436 54 KDTSNLKCIIRRNGNVQIQGVMTEGDV-------AKNSSKVYKMLQQQLCPPG-EFTVSFSLP 108 (141)
Q Consensus 54 kedi~V~ve~~~~~~L~I~G~~~~~~~-------~~~~~~~er~~~~~~~~~G-~F~R~~~LP 108 (141)
++++. + .+|.|+|.+.+..+.. ...| ..-|..++..+.+| .|+-+++||
T Consensus 55 ~~Nv~--v---~dG~L~I~a~~~~~~~~~~~~~~~~~y-~s~~i~s~~~~~~G~~~e~r~k~p 111 (266)
T 4ate_A 55 KGNAF--V---SDGFLNLRSTLRKEPSSVQDPFKDIWV-DAAAAVSKTKAQPGYYYEARFKAS 111 (266)
T ss_dssp TTSEE--E---ETTEEEEECEESSCGGGSSCTTTSCCE-EECEEEEEEEECTTCEEEEEEECC
T ss_pred hhhEE--E---eCCcEEEEEEecCCCcccccCCCCccE-EEEEEEEeCcCcCCeEEEEEEEcC
Confidence 46554 5 6899999998752110 1112 11222223335689 799999998
No 59
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=39.75 E-value=25 Score=21.31 Aligned_cols=20 Identities=15% Similarity=0.330 Sum_probs=17.1
Q ss_pred CCCeEEEEEeccCCEEEEEEEEe
Q 032436 54 KDTSNLKCIIRRNGNVQIQGVMT 76 (141)
Q Consensus 54 kedi~V~ve~~~~~~L~I~G~~~ 76 (141)
-.||+|.+ ++++++++|+-.
T Consensus 32 yndinvtw---dgdtvtvegqle 51 (62)
T 2gjh_A 32 YNDINVTW---DGDTVTVEGQLE 51 (62)
T ss_dssp CCSCEEEE---CSSCEEEEEECC
T ss_pred cccceeEE---cCCEEEEEeEEc
Confidence 46899999 899999999865
No 60
>3iz5_F 60S ribosomal protein L9 (L6P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_F
Probab=39.75 E-value=69 Score=23.94 Aligned_cols=45 Identities=16% Similarity=0.120 Sum_probs=31.3
Q ss_pred CCeEEEEEeccCCEEEEEEEEeecccCCceeeEEEEeccccCCCeeEEEEEECCCCCCCCCceeEe--CCCCEEEEEEec
Q 032436 55 DTSNLKCIIRRNGNVQIQGVMTEGDVAKNSSKVYKMLQQQLCPPGEFTVSFSLPGPVDPRLFHPQF--RQDGILEGVVMK 132 (141)
Q Consensus 55 edi~V~ve~~~~~~L~I~G~~~~~~~~~~~~~~er~~~~~~~~~G~F~R~~~LP~~vd~~~I~A~~--~~dGVL~I~vPK 132 (141)
++++|++ .++.++|+|. -|+..|.|+- . .++-.+ + ++.|.|..+-
T Consensus 14 ~gV~v~i---~~~~V~VkGP-----------------------kG~L~~~~~~-~-----~v~i~~~~~-~~~l~v~~~~ 60 (190)
T 3iz5_F 14 EGVTVQV---AAKVVTVEGP-----------------------RGKLTRNFKH-L-----NLDFQLLEG-GRKLQVDAWF 60 (190)
T ss_dssp TTCEEEE---ETTEEEEEET-----------------------TEEEEEECCC-T-----TEEEEEETT-TTEEEEEESC
T ss_pred CCCEEEE---eCCEEEEECC-----------------------CceEEEEccC-C-----cEEEEEEcC-CCEEEEEECC
Confidence 7889988 8899999995 4555555531 1 244455 6 8998888654
No 61
>3rq0_A Glycosyl hydrolases family protein 16; structural genomics, PSI-biology; HET: PG4 211; 2.02A {Mycobacterium smegmatis}
Probab=37.58 E-value=76 Score=24.85 Aligned_cols=38 Identities=11% Similarity=0.093 Sum_probs=25.4
Q ss_pred CCEEEEEEEEeecccCCceeeEEEEeccccCCCee-EEEEEECC
Q 032436 66 NGNVQIQGVMTEGDVAKNSSKVYKMLQQQLCPPGE-FTVSFSLP 108 (141)
Q Consensus 66 ~~~L~I~G~~~~~~~~~~~~~~er~~~~~~~~~G~-F~R~~~LP 108 (141)
+|.|+|.+.+.. ..+ ..-|.+....+.+|. |+-+++||
T Consensus 96 ~G~L~I~a~~~~----~~~-~Sgri~sk~~~~yG~~~E~r~Klp 134 (269)
T 3rq0_A 96 KSNLVIRAAKDG----DTY-YSAKLASVWEGGAGHTWEARIKFN 134 (269)
T ss_dssp SSCEEEEEEEET----TEE-EEEEEEESSCBCSSEEEEEEEEEE
T ss_pred CCEEEEEEEcCC----CCE-EEEEEEEeeeccCCeEEEEEEECC
Confidence 899999998651 111 222333344566898 99999999
No 62
>4awd_A Beta-porphyranase; hydrolase; 2.40A {Bacteroides plebeius}
Probab=36.91 E-value=88 Score=25.12 Aligned_cols=53 Identities=6% Similarity=0.040 Sum_probs=32.6
Q ss_pred CCCCeEEEEEeccCCEEEEEEEEeec-----cc-CCceee-EEEEecccc-CCCeeEEEEEECCCC
Q 032436 53 RKDTSNLKCIIRRNGNVQIQGVMTEG-----DV-AKNSSK-VYKMLQQQL-CPPGEFTVSFSLPGP 110 (141)
Q Consensus 53 ~kedi~V~ve~~~~~~L~I~G~~~~~-----~~-~~~~~~-~er~~~~~~-~~~G~F~R~~~LP~~ 110 (141)
+++++. + ++|.|+|.+.+... .. ...|.. .-|.+.+.. +.||.|+-+++||..
T Consensus 85 ~~~Nv~--v---~dG~L~I~a~~~~~~~~~~G~~~~~ytsasg~i~Sk~~~~~yG~~E~r~Klp~~ 145 (324)
T 4awd_A 85 KAENVS--V---KKGCLRIINTVLSPTEGLDGKPGDKYRLAGGAVASVKNQAHYGYYETRMKASLT 145 (324)
T ss_dssp CGGGEE--E---ETTEEEEECEEEEEEECGGGCBSSSEEEEECEEEESCCCBCSEEEEEEEECCSS
T ss_pred cchhEE--E---ECCEEEEEEEeCCCCcccCCcccccEEEEEEEEEECCccccCcEEEEEEECCCC
Confidence 456654 4 68999999987621 11 012321 113333333 779999999999974
No 63
>3v2d_H 50S ribosomal protein L6; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_F 2hgj_H 2hgq_H 2hgu_H 1vsa_F 2j03_H 2jl6_H 2jl8_H 2v47_H 2v49_H 2wdi_H 2wdj_H 2wdl_H 2wdn_H 2wh2_H 2wh4_H 2wrj_H 2wrl_H 2wro_H 2wrr_H ...
Probab=34.59 E-value=72 Score=23.58 Aligned_cols=44 Identities=16% Similarity=0.301 Sum_probs=30.9
Q ss_pred CCCeEEEEEeccCCEEEEEEEEeecccCCceeeEEEEeccccCCCeeEEEEEECCCCCCCCCceeEeCCCCEEEEEEe
Q 032436 54 KDTSNLKCIIRRNGNVQIQGVMTEGDVAKNSSKVYKMLQQQLCPPGEFTVSFSLPGPVDPRLFHPQFRQDGILEGVVM 131 (141)
Q Consensus 54 kedi~V~ve~~~~~~L~I~G~~~~~~~~~~~~~~er~~~~~~~~~G~F~R~~~LP~~vd~~~I~A~~~~dGVL~I~vP 131 (141)
+++++|++ .++.++|+|. -|+..|.| |.. ++-.++ ++.|.|..+
T Consensus 12 P~gV~v~i---~~~~v~VkGp-----------------------kG~L~~~~--~~~-----v~i~~~-~~~l~v~~~ 55 (180)
T 3v2d_H 12 PKGVSVEV---APGRVKVKGP-----------------------KGELEVPV--SPE-----MRVVVE-EGVVRVERP 55 (180)
T ss_dssp CTTCEEEE---ETTEEEEECS-----------------------SCEEEEEC--CTT-----SEEEEE-TTEEEEECS
T ss_pred CCCcEEEE---eCCEEEEEeC-----------------------CcEEEEEe--CCC-----EEEEEE-CCEEEEEEC
Confidence 37889988 8899999995 35555555 333 455577 888888743
No 64
>1o4z_A Beta-agarase B; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: EPE; 2.30A {Zobellia galactanivorans} SCOP: b.29.1.2
Probab=34.22 E-value=83 Score=25.36 Aligned_cols=50 Identities=8% Similarity=0.090 Sum_probs=30.9
Q ss_pred CCCCeEEEEEeccCCEEEEEEEEeecccCCceeeEEEEeccccCCCe-eEEEEEECCCC
Q 032436 53 RKDTSNLKCIIRRNGNVQIQGVMTEGDVAKNSSKVYKMLQQQLCPPG-EFTVSFSLPGP 110 (141)
Q Consensus 53 ~kedi~V~ve~~~~~~L~I~G~~~~~~~~~~~~~~er~~~~~~~~~G-~F~R~~~LP~~ 110 (141)
+++++ .+ .+|.|+|++.+.... ..+ ..-|...+..+.|| .|+-+++||..
T Consensus 103 ~~~Nv--~v---~dG~L~I~a~~~~g~--~~~-tSg~i~Sk~~f~YGr~vEaRaKlp~g 153 (346)
T 1o4z_A 103 KRDRS--YV---ADGELKMWATRKPGS--DKI-NMGCITSKTRVVYPVYIEARAKVMNS 153 (346)
T ss_dssp CGGGE--EE---ETTEEEEECEECTTS--SCE-EECEEEESSCBCSSEEEEEEEECCSS
T ss_pred cccCE--EE---ECCEEEEEEEecCCC--CcE-EeeEEEeCccEeCCeEEEEEEEecCC
Confidence 34555 45 689999999875211 112 12233333446799 59999999963
No 65
>3oeq_A Frataxin homolog, mitochondrial; alpha/beta sandwich, metallochaperone, iron-storage, transpo protein; 2.96A {Saccharomyces cerevisiae} SCOP: d.82.2.1 PDB: 2fql_A 3oer_A 2ga5_A
Probab=33.37 E-value=30 Score=24.32 Aligned_cols=17 Identities=6% Similarity=0.157 Sum_probs=14.7
Q ss_pred CceeEeCCCCEEEEEEec
Q 032436 115 LFHPQFRQDGILEGVVMK 132 (141)
Q Consensus 115 ~I~A~~~~dGVL~I~vPK 132 (141)
.+.+.+. +|||+|+++.
T Consensus 48 ~~Dve~~-~gVLti~f~~ 64 (123)
T 3oeq_A 48 IPDVELS-HGVMTLEIPA 64 (123)
T ss_dssp CCEEEEC-SSEEEEECTT
T ss_pred ceEEEcc-CCEEEEEECC
Confidence 3789999 9999999873
No 66
>3u5e_H L8, RP24, YL11, 60S ribosomal protein L9-A; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_F 1s1i_H 3izs_F* 3j16_F 3o5h_I 3o58_I 3u5i_H 4b6a_H 3jyw_H
Probab=33.26 E-value=91 Score=23.26 Aligned_cols=46 Identities=11% Similarity=0.187 Sum_probs=31.5
Q ss_pred CCCeEEEEEeccCCEEEEEEEEeecccCCceeeEEEEeccccCCCeeEEEEEECCCCCCCCCceeE-eCCCCEEEEEEec
Q 032436 54 KDTSNLKCIIRRNGNVQIQGVMTEGDVAKNSSKVYKMLQQQLCPPGEFTVSFSLPGPVDPRLFHPQ-FRQDGILEGVVMK 132 (141)
Q Consensus 54 kedi~V~ve~~~~~~L~I~G~~~~~~~~~~~~~~er~~~~~~~~~G~F~R~~~LP~~vd~~~I~A~-~~~dGVL~I~vPK 132 (141)
|++++|++ .++.++|+|. -|+..|.|. . + .++-. .+ +|.|.|..+-
T Consensus 13 P~gV~v~i---~~~~V~VkGP-----------------------kG~L~~~~~--~-~---~v~i~~~~-~~~l~v~~~~ 59 (191)
T 3u5e_H 13 PEGVTVSI---KSRIVKVVGP-----------------------RGTLTKNLK--H-I---DVTFTKVN-NQLIKVAVHN 59 (191)
T ss_dssp CTTCEEEE---ETTEEEEEET-----------------------TEEEEEECT--T-T---CCEEEEEE-TTEEEEEEEE
T ss_pred CCCcEEEE---eCCEEEEEcC-----------------------CeEEEEEcc--C-C---cEEEEEec-CCeEEEEECC
Confidence 37889988 8899999995 455555543 2 1 33445 56 8888888654
No 67
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=33.10 E-value=17 Score=24.75 Aligned_cols=17 Identities=12% Similarity=0.108 Sum_probs=14.8
Q ss_pred CceeEeCCCCEEEEEEec
Q 032436 115 LFHPQFRQDGILEGVVMK 132 (141)
Q Consensus 115 ~I~A~~~~dGVL~I~vPK 132 (141)
.+.+.+. +|||+|+++.
T Consensus 29 d~D~e~~-~gVLti~f~~ 45 (106)
T 1ew4_A 29 DIDCEIN-GGVLTITFEN 45 (106)
T ss_dssp CCEEEEE-TTEEEEECTT
T ss_pred CEeeecc-CCEEEEEECC
Confidence 4889999 9999999863
No 68
>2w39_A Putative laminarinase; hydrolase, white ROT fungus, glycosyl hydrolase, GH7, GH16, LAM16A, family 16, beta-glucan, basidiomycete; HET: NAG BGC LGC; 1.10A {Phanerochaete chrysosporium} PDB: 2cl2_A* 2w52_A* 2wlq_A* 2wne_A*
Probab=32.64 E-value=71 Score=25.25 Aligned_cols=45 Identities=4% Similarity=0.005 Sum_probs=27.1
Q ss_pred cCCEEEEEEEEeecc-cCCceeeEEEEeccccCCCeeEEEEE-ECCC
Q 032436 65 RNGNVQIQGVMTEGD-VAKNSSKVYKMLQQQLCPPGEFTVSF-SLPG 109 (141)
Q Consensus 65 ~~~~L~I~G~~~~~~-~~~~~~~~er~~~~~~~~~G~F~R~~-~LP~ 109 (141)
++|.|+|.+.+.... ........-|...+..+.+|.|+-++ +||.
T Consensus 48 ~~G~L~i~~~~~~~~~~~g~~~~S~ri~sk~~f~yG~~e~r~ak~p~ 94 (298)
T 2w39_A 48 SGDTLILRADHTTTLSPSGPGRNSVRIRSIKTYTTHVAVFDVRHMPQ 94 (298)
T ss_dssp ETTEEEEECCCSCCCCTTSCCEEECEEEESSCBSSEEEEEEEEECCC
T ss_pred ECCEEEEEEEeCCccCCCCCceEEEEEEEeCcccCEEEEEEEeccCC
Confidence 689999988764211 11111122333444566799999887 9986
No 69
>4atf_A Beta-agarase B; hydrolase, polysaccharidase, agarolytic enzyme; HET: AAL GAL; 1.90A {Zobellia galactanivorans}
Probab=32.19 E-value=1e+02 Score=24.71 Aligned_cols=49 Identities=8% Similarity=0.078 Sum_probs=30.4
Q ss_pred CCCCeEEEEEeccCCEEEEEEEEeecccCCceeeEEEEeccccCCCe-eEEEEEECCC
Q 032436 53 RKDTSNLKCIIRRNGNVQIQGVMTEGDVAKNSSKVYKMLQQQLCPPG-EFTVSFSLPG 109 (141)
Q Consensus 53 ~kedi~V~ve~~~~~~L~I~G~~~~~~~~~~~~~~er~~~~~~~~~G-~F~R~~~LP~ 109 (141)
.++++ .| ++|.|+|++.+... . ..+ ..-+..++..+.+| .|+-+++||.
T Consensus 72 ~~~Nv--~v---~dG~L~I~a~~~~~-~-~~~-tSg~i~Sk~~~~ygg~~EaR~Kl~~ 121 (308)
T 4atf_A 72 KRDRS--YV---ADGELKMWATRKPG-S-DKI-NMGCITSKTRVVYPVYIEARAKVMN 121 (308)
T ss_dssp CGGGE--EE---ETTEEEEECEECTT-S-SCE-EECEEEESSCBCSSEEEEEEEECCS
T ss_pred cccce--EE---ECCEEEEEEEecCC-C-CCE-EEEEEEECceeecCeEEEEEEECCC
Confidence 45655 45 68999999987521 1 112 12233334445677 8999999985
No 70
>2lez_A Secreted effector protein PIPB2; structural genomics, northeast structural genomics consortiu bacterial effector, virulence factor; NMR {Salmonella enterica subsp}
Probab=31.19 E-value=1e+02 Score=22.30 Aligned_cols=40 Identities=10% Similarity=0.155 Sum_probs=30.4
Q ss_pred EEEcCCeEEEEEEcCCCCCCCeEEEEEeccCCEEEEEEEEe
Q 032436 36 IGVSDKAYLFRVSLPGARKDTSNLKCIIRRNGNVQIQGVMT 76 (141)
Q Consensus 36 i~Et~~~y~v~~dLPGv~kedi~V~ve~~~~~~L~I~G~~~ 76 (141)
+.|+=++|.|.+..||..-..-+|.|||..+|.- ++++..
T Consensus 65 ~l~dinGc~V~Fs~p~~~~~~g~VtVEV~k~g~t-~t~eVd 104 (145)
T 2lez_A 65 ILDDMDGCRVEFNLPGENNEAGQVIVRVSKGDHS-ETREIP 104 (145)
T ss_dssp EEEEETTEEEEEECCCTTCSSCEEEEEEEETTEE-EEEEEE
T ss_pred EEeccCCEEEEecCCCccccCCcEEEEEcCCCce-eeeeec
Confidence 4556699999999999988777788888777776 444443
No 71
>3azy_A Laminarinase; beta-jelly roll fold, glycosyl hydrolase family 16, laminari endo-1,3-beta-glucanase, hydrolase; 1.65A {Thermotoga maritima} PDB: 3azx_A 3azz_A* 3b00_A* 3b01_A 4dfs_A
Probab=30.98 E-value=1.4e+02 Score=22.78 Aligned_cols=45 Identities=18% Similarity=0.212 Sum_probs=26.2
Q ss_pred cCCEEEEEEEEee-cccCCc-eeeEEEEeccc--cCCCeeEEEEEECCC
Q 032436 65 RNGNVQIQGVMTE-GDVAKN-SSKVYKMLQQQ--LCPPGEFTVSFSLPG 109 (141)
Q Consensus 65 ~~~~L~I~G~~~~-~~~~~~-~~~~er~~~~~--~~~~G~F~R~~~LP~ 109 (141)
.+|.|+|++.+.. ...... ....-|...+. .+.+|.|+-+++||.
T Consensus 59 ~~G~L~I~a~~~~~~~~~g~~~~tSg~i~S~~~f~~~yG~~E~r~klp~ 107 (272)
T 3azy_A 59 ENGCLVIEARKEQVSDEYGTYDYTSARMTTEGKFEIKYGKIEIRAKLPK 107 (272)
T ss_dssp ETTEEEEEEEEEEEECSSCEEEEEECEEECTTTCEESSEEEEEEEECCC
T ss_pred cCCEEEEEEEcccccCCCCCEeEEEeEEEecCcccccCcEEEEEEEcCC
Confidence 6899999987652 111111 11122332222 235999999999996
No 72
>3bbo_I Ribosomal protein L6; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=30.98 E-value=29 Score=26.84 Aligned_cols=46 Identities=15% Similarity=0.320 Sum_probs=31.6
Q ss_pred CCCeEEEEEeccCCEEEEEEEEeecccCCceeeEEEEeccccCCCeeEEEEEECCCCCCCCCcee-EeCCCCEEEEEEec
Q 032436 54 KDTSNLKCIIRRNGNVQIQGVMTEGDVAKNSSKVYKMLQQQLCPPGEFTVSFSLPGPVDPRLFHP-QFRQDGILEGVVMK 132 (141)
Q Consensus 54 kedi~V~ve~~~~~~L~I~G~~~~~~~~~~~~~~er~~~~~~~~~G~F~R~~~LP~~vd~~~I~A-~~~~dGVL~I~vPK 132 (141)
+++++|++ +++.++|+|. -|+..+.| |..+ +- ..+ ||.|.|..|.
T Consensus 54 P~gV~V~i---~~~~VtVKGP-----------------------kG~L~~~~--~~~v-----~i~~~e-~~~i~v~~~~ 99 (223)
T 3bbo_I 54 PSNVTIAL---EGQDLKVKGP-----------------------LGELALTY--PREV-----ELTKEE-SGFLRVKKTV 99 (223)
T ss_dssp STTSCEEE---SSSEEEECCS-----------------------SCCEEEEC--CSSC-----EEEECS-SSCEEEECSS
T ss_pred CCCCEEEE---eCCEEEEECC-----------------------CeEEEEEc--CCCE-----EEEEec-CCEEEEEcCC
Confidence 37788888 8899999995 35555544 4443 44 567 8888887665
Q ss_pred c
Q 032436 133 H 133 (141)
Q Consensus 133 ~ 133 (141)
.
T Consensus 100 ~ 100 (223)
T 3bbo_I 100 E 100 (223)
T ss_dssp C
T ss_pred C
Confidence 4
No 73
>3o5s_A Beta-glucanase; glycosyl hydrolase, beta-jelly roll, hydrolase; HET: B3P; 2.20A {Bacillus subtilis} PDB: 3d6e_A
Probab=30.20 E-value=1.8e+02 Score=22.00 Aligned_cols=41 Identities=10% Similarity=-0.003 Sum_probs=26.1
Q ss_pred cCCEEEEEEEEeecccCCceeeEEEEeccccCCCeeEEEEEECCC
Q 032436 65 RNGNVQIQGVMTEGDVAKNSSKVYKMLQQQLCPPGEFTVSFSLPG 109 (141)
Q Consensus 65 ~~~~L~I~G~~~~~~~~~~~~~~er~~~~~~~~~G~F~R~~~LP~ 109 (141)
.+|.|+|+..+.... .+. .-|.+.+..+.||.|+-++++|.
T Consensus 67 ~~G~L~l~~~~~~~~---~~t-s~~i~S~~~~~yG~~e~r~K~p~ 107 (238)
T 3o5s_A 67 SLGEMRLALTSPAYN---KFD-CGENRSVQTYGYGLYEVRMKPAK 107 (238)
T ss_dssp TTSCEEEEEEEEETT---EEE-EEEEEESSCBCSEEEEEEEECCC
T ss_pred CCCEEEEEEEeCCCC---cee-EEEEEEcCeEccEEEEEEEEeCC
Confidence 448999998765321 121 12333344567999999999985
No 74
>2dng_A Eukaryotic translation initiation factor 4H; RRM domain, RBD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=27.75 E-value=16 Score=23.29 Aligned_cols=31 Identities=13% Similarity=0.070 Sum_probs=26.5
Q ss_pred EECCCCCCCCCceeEeCCCCEEEEEEeccCC
Q 032436 105 FSLPGPVDPRLFHPQFRQDGILEGVVMKHRK 135 (141)
Q Consensus 105 ~~LP~~vd~~~I~A~~~~dGVL~I~vPK~~~ 135 (141)
-.||..++.+.+...|.+-||..|.+++...
T Consensus 21 ~nLp~~~t~~~l~~~F~~~gi~~v~i~~~~~ 51 (103)
T 2dng_A 21 GNLPFNTVQGDIDAIFKDLSIRSVRLVRDKD 51 (103)
T ss_dssp ESCCTTCCHHHHHHHTTTSCEEEEEEEECSS
T ss_pred eCCCCCCCHHHHHHHHHhCCceEEEEeecCC
Confidence 3689999999999999966999999998654
No 75
>2vy0_A Endo-beta-1,3-glucanase; hydrolase, laminarin, endoglucanase, thermostable protein,; 2.16A {Pyrococcus furiosus}
Probab=27.66 E-value=1.5e+02 Score=22.34 Aligned_cols=46 Identities=13% Similarity=0.044 Sum_probs=27.6
Q ss_pred cCCEEEEEEEEeeccc---CCceeeEEEEeccc--cCC-CeeEEEEEECCCC
Q 032436 65 RNGNVQIQGVMTEGDV---AKNSSKVYKMLQQQ--LCP-PGEFTVSFSLPGP 110 (141)
Q Consensus 65 ~~~~L~I~G~~~~~~~---~~~~~~~er~~~~~--~~~-~G~F~R~~~LP~~ 110 (141)
.+|.|.|.+.+..... .......-|.+.+. .+. +|.|+-+++||..
T Consensus 62 ~~G~L~I~~~~~~~~~~~~G~~~~~S~~i~S~~~f~~~~yG~~E~r~klp~g 113 (264)
T 2vy0_A 62 VNGTLVIEARKEIITDPNEGTFLYTSSRLKTEGKVEFSPPVVVEARIKLPKG 113 (264)
T ss_dssp ETTEEEEEEEEEEEEETTTEEEEEEECEEECTTTCEECSSEEEEEEEECCCS
T ss_pred cCCEEEEEEEecccCCCCCCCccEEEEEEEecCcccccCCeEEEEEEEcCCC
Confidence 7899999997652110 00111222333333 455 8999999999963
No 76
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=26.98 E-value=1.4e+02 Score=25.31 Aligned_cols=44 Identities=18% Similarity=0.217 Sum_probs=31.7
Q ss_pred ceeEEEcC------CeEEEEEEcCCCCC-----CCeEEEEEeccCCEEEEEEEEe
Q 032436 33 LYDIGVSD------KAYLFRVSLPGARK-----DTSNLKCIIRRNGNVQIQGVMT 76 (141)
Q Consensus 33 ~vDi~Et~------~~y~v~~dLPGv~k-----edi~V~ve~~~~~~L~I~G~~~ 76 (141)
.+.|++.+ +..+-.+.|.|+.+ ..|+|+++++.+|.|.|++...
T Consensus 439 ~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~gil~v~a~~~ 493 (554)
T 1yuw_A 439 LIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDK 493 (554)
T ss_dssp EEEEEESSSSBGGGSEEEEEEEEECCCCCSTTCCCEEEEEEECTTCCEEEEEEET
T ss_pred EEEEEecCccccccCcEEEEEEEeCCCCCcccccEEEEEEEEccCceEEEEEEec
Confidence 45667643 45566677766643 2489999999999999999754
No 77
>2zkr_e 60S ribosomal protein L9; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=25.93 E-value=77 Score=23.68 Aligned_cols=19 Identities=11% Similarity=0.288 Sum_probs=16.0
Q ss_pred CCCCeEEEEEeccCCEEEEEEE
Q 032436 53 RKDTSNLKCIIRRNGNVQIQGV 74 (141)
Q Consensus 53 ~kedi~V~ve~~~~~~L~I~G~ 74 (141)
=++.++|++ .++.++|+|.
T Consensus 12 IP~gV~V~i---~~~~VtVkGp 30 (192)
T 2zkr_e 12 IPENVDITL---KGRTVIVKGP 30 (192)
T ss_dssp CCTTCEEEE---ETTEEEEEET
T ss_pred cCCCCEEEE---eCCEEEEECC
Confidence 357889998 8899999995
No 78
>2kgs_A Uncharacterized protein RV0899/MT0922; outer membrane protein A, BON DO cell membrane, membrane, transmembrane, membrane protein; NMR {Mycobacterium tuberculosis} PDB: 2ksm_A
Probab=25.52 E-value=46 Score=23.06 Aligned_cols=25 Identities=8% Similarity=0.078 Sum_probs=21.0
Q ss_pred cCCCCCCCeEEEEEeccCCEEEEEEEEe
Q 032436 49 LPGARKDTSNLKCIIRRNGNVQIQGVMT 76 (141)
Q Consensus 49 LPGv~kedi~V~ve~~~~~~L~I~G~~~ 76 (141)
.|..++-.|.|.+ ++|.+|++|...
T Consensus 2 ~~~~~p~~i~V~v---~~G~VTLsG~Vp 26 (132)
T 2kgs_A 2 ASALSLSLLSISR---SGNTVTLIGDFP 26 (132)
T ss_dssp CCCCCEEEEEEEE---CSSEEEEEEEES
T ss_pred CCcccceeEEEEE---ECCEEEEEEECC
Confidence 3667777788888 899999999986
No 79
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=23.31 E-value=85 Score=21.42 Aligned_cols=32 Identities=13% Similarity=0.159 Sum_probs=24.6
Q ss_pred CeeEEEEEECCCCCCCCCceeEeCCCCEEEEEE
Q 032436 98 PGEFTVSFSLPGPVDPRLFHPQFRQDGILEGVV 130 (141)
Q Consensus 98 ~G~F~R~~~LP~~vd~~~I~A~~~~dGVL~I~v 130 (141)
.....-+|.||..++.+.+...+. ..-|.|.+
T Consensus 13 ~~~V~i~I~lp~~~~~kdv~V~i~-~~~l~v~~ 44 (131)
T 2o30_A 13 LNEINIQFPVTGDADSSAIKIRMV-GKKICVKN 44 (131)
T ss_dssp TTEEEEEEECC---CCSCEEEEEE-TTEEEEEE
T ss_pred CCEEEEEEECCCCCCccceEEEEE-CCEEEEEE
Confidence 345667899999999999999999 88889887
No 80
>3r8s_G 50S ribosomal protein L6; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_E 1p86_E 2awb_G 2aw4_G 2i2v_G 2j28_G 2i2t_G* 2qao_G* 2qba_G* 2qbc_G* 2qbe_G 2qbg_G 2qbi_G* 2qbk_G* 2qov_G 2qox_G 2qoz_G* 2qp1_G* 2rdo_G 2vhm_G ...
Probab=23.01 E-value=40 Score=24.87 Aligned_cols=42 Identities=19% Similarity=0.226 Sum_probs=29.1
Q ss_pred CCCeEEEEEeccCCEEEEEEEEeecccCCceeeEEEEeccccCCCeeEEEEEECCCCCCCCCceeEeCCCCEEEEE
Q 032436 54 KDTSNLKCIIRRNGNVQIQGVMTEGDVAKNSSKVYKMLQQQLCPPGEFTVSFSLPGPVDPRLFHPQFRQDGILEGV 129 (141)
Q Consensus 54 kedi~V~ve~~~~~~L~I~G~~~~~~~~~~~~~~er~~~~~~~~~G~F~R~~~LP~~vd~~~I~A~~~~dGVL~I~ 129 (141)
+++++|++ .++.++|+|. -|+.+|.| |.. |+-..+ ++.|.|.
T Consensus 11 P~gV~v~i---~~~~V~VkGp-----------------------kG~L~~~~--~~~-----v~i~~~-~~~l~v~ 52 (176)
T 3r8s_G 11 PAGVDVKI---NGQVITIKGK-----------------------NGELTRTL--NDA-----VEVKHA-DNTLTFG 52 (176)
T ss_dssp CTTCCCEE---SSSEEECCBT-----------------------TBCCEEEC--CSS-----CEEEEE-TTEEEEE
T ss_pred CCCcEEEE---eCCEEEEEcC-----------------------CEEEEEEC--CCC-----EEEEEe-CCEEEEE
Confidence 37788888 8889999985 34555554 443 455677 8888887
No 81
>2j76_E EIF-4B, EIF4B, eukaryotic translation initiation factor 4B; protein biosynthesis, RNA recognition motif, RNA binding domain, RRM, RBD, RNP; NMR {Homo sapiens}
Probab=22.59 E-value=28 Score=22.08 Aligned_cols=29 Identities=21% Similarity=0.149 Sum_probs=24.5
Q ss_pred ECCCCCCCCCceeEeCCCCEEEEEEeccC
Q 032436 106 SLPGPVDPRLFHPQFRQDGILEGVVMKHR 134 (141)
Q Consensus 106 ~LP~~vd~~~I~A~~~~dGVL~I~vPK~~ 134 (141)
.||..++.+.+...|.+-||..|.+++..
T Consensus 26 nLp~~~t~~~l~~~F~~~Gi~~v~i~~~~ 54 (100)
T 2j76_E 26 NLPYDVTEESIKEFFRGLNISAVRLPREP 54 (100)
T ss_dssp CCSSCCSSSHHHHHSCSSCEEEEECSCCT
T ss_pred CCCCCCCHHHHHHHHHhcCCeEEEEEecC
Confidence 57889999999999986698899988765
No 82
>1dyp_A Kappa-carrageenase; hydrolase, kappa-carrageenan double helix degradation; HET: MSE; 1.54A {Pseudoalteromonas carrageenovora} SCOP: b.29.1.2
Probab=21.30 E-value=1.8e+02 Score=21.98 Aligned_cols=51 Identities=4% Similarity=-0.000 Sum_probs=28.9
Q ss_pred CCCCeEEEEEeccCCEEEEEEEEeeccc--------------CCceeeEEEEeccccCCCeeEEEEEEC-CC
Q 032436 53 RKDTSNLKCIIRRNGNVQIQGVMTEGDV--------------AKNSSKVYKMLQQQLCPPGEFTVSFSL-PG 109 (141)
Q Consensus 53 ~kedi~V~ve~~~~~~L~I~G~~~~~~~--------------~~~~~~~er~~~~~~~~~G~F~R~~~L-P~ 109 (141)
+++++ .+ ++|.|.|++.+..... ...+ ..-|.+.+..+.||.|+-+++| |.
T Consensus 44 ~~~nv--~v---~~G~L~I~a~~~~~~~~~~~~~~~~~~~g~~~~~-~S~~i~s~~~~~yG~~E~r~K~~p~ 109 (271)
T 1dyp_A 44 KNENA--TV---SKGKLKLTTKRESHQRTFWDGCNQQQVANYPLYY-TSGVAKSRATGNYGYYEARIKGAST 109 (271)
T ss_dssp CGGGE--EE---ETTEEEEEEEEEEEEEEEEEGGGTEEEEEEEEEE-EECEEEEEEEECSEEEEEEEECCSC
T ss_pred CCccE--EE---ECCEEEEEEEeccCCCcccCCcccccccCCccce-EEEEEEecCcccCcEEEEEEEeCCC
Confidence 55665 45 6899999997652100 0001 1112222234569999999996 73
No 83
>3t3l_A Frataxin, mitochondrial; Fe-S cluster biosynthesis, human mitochondria, oxidoreductas; 1.15A {Homo sapiens} SCOP: d.82.2.1 PDB: 3s4m_A 3t3k_A 3t3j_A 3s5f_A 3t3x_A 3t3t_A 3s5e_A 3s5d_A 1ekg_A 1ly7_A
Probab=20.86 E-value=47 Score=23.40 Aligned_cols=17 Identities=18% Similarity=0.270 Sum_probs=14.7
Q ss_pred CCceeEeCCCCEEEEEEe
Q 032436 114 RLFHPQFRQDGILEGVVM 131 (141)
Q Consensus 114 ~~I~A~~~~dGVL~I~vP 131 (141)
..+.+.+. +|||+|+++
T Consensus 40 ~d~D~e~~-~gVLti~f~ 56 (129)
T 3t3l_A 40 EDYDVSFG-SGVLTVKLG 56 (129)
T ss_dssp TTCEEEEE-TTEEEEECC
T ss_pred cceeeecC-CCEEEEEEc
Confidence 46788899 999999985
No 84
>3k67_A Putative dehydratase AF1124; hypothetical protein AF1124, structural genomics, PSI, protein structure initiative; 1.25A {Archaeoglobus fulgidus} PDB: 2b3m_A
Probab=20.59 E-value=1.2e+02 Score=21.42 Aligned_cols=35 Identities=14% Similarity=0.196 Sum_probs=15.5
Q ss_pred CeEEEEEEcCCCCCCCeEEEEEeccCCEEEEEEEE
Q 032436 41 KAYLFRVSLPGARKDTSNLKCIIRRNGNVQIQGVM 75 (141)
Q Consensus 41 ~~y~v~~dLPGv~kedi~V~ve~~~~~~L~I~G~~ 75 (141)
|.+.+.+.+-++++..+.+++++..++.++++|+.
T Consensus 120 Dtl~~~~~V~~~~~~~~~~~~~~~~~d~vV~~G~a 154 (159)
T 3k67_A 120 DVVRVEGVVSGVEKNRYTIDVKCYTGDKVVAEGVV 154 (159)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEEEETTEEEEEEEE
T ss_pred CEEEEEEEEEEEECCEEEEEEEEEECCEEEEEEEE
Confidence 33444444433344444444443344455555543
No 85
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=20.24 E-value=1.5e+02 Score=25.46 Aligned_cols=44 Identities=11% Similarity=0.110 Sum_probs=31.7
Q ss_pred ceeEEEcC------CeEEEEEEcCCCCC-----CCeEEEEEeccCCEEEEEEEEe
Q 032436 33 LYDIGVSD------KAYLFRVSLPGARK-----DTSNLKCIIRRNGNVQIQGVMT 76 (141)
Q Consensus 33 ~vDi~Et~------~~y~v~~dLPGv~k-----edi~V~ve~~~~~~L~I~G~~~ 76 (141)
.+.|++.+ +..+=.+.|.|+.+ ..|+|+++++.+|.|.|++...
T Consensus 437 ~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~gil~v~a~~~ 491 (605)
T 4b9q_A 437 TIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDK 491 (605)
T ss_dssp EEEEEESSCSBGGGSEEEEEEEEECCCCCSTTCCCEEEEEEECTTSCEEEEEEET
T ss_pred EEEEEeccccccccCCEeeEEEEeCCCCCcCCCceEEEEEEEcCCcEEEEEEEec
Confidence 45666643 44565666666554 3699999999999999999864
Done!