Query 032439
Match_columns 140
No_of_seqs 80 out of 82
Neff 3.9
Searched_HMMs 13730
Date Mon Mar 25 23:13:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032439.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/032439hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2pcsa1 d.129.3.10 (A:1-147) H 64.0 7.3 0.00053 24.5 5.3 44 63-106 5-49 (147)
2 d2dlqa1 g.37.1.1 (A:93-118) GL 32.1 7.3 0.00053 20.4 0.9 11 3-13 1-11 (26)
3 d1v8ca2 d.129.5.1 (A:88-165) M 29.2 46 0.0034 21.1 4.7 16 94-109 24-39 (78)
4 d2drpa1 g.37.1.1 (A:103-139) T 26.8 6.7 0.00049 22.2 0.1 13 94-106 2-14 (37)
5 d1ncna_ b.1.1.1 (A:) CD86 (b7- 26.2 35 0.0025 20.5 3.7 17 90-106 73-89 (110)
6 d1pkoa_ b.1.1.1 (A:) Myelin ol 23.1 39 0.0029 20.4 3.5 34 88-124 83-116 (126)
7 d1dr9a1 b.1.1.1 (A:1-105) CD80 15.0 46 0.0034 19.9 2.3 19 90-108 69-87 (105)
8 d1exta3 g.24.1.1 (A:116-172) T 14.4 32 0.0023 21.0 1.3 12 6-17 1-12 (57)
9 d1qfoa_ b.1.1.1 (A:) N-termina 13.6 40 0.0029 19.7 1.7 37 88-124 81-117 (118)
10 d2oz4a3 b.1.1.4 (A:367-450) In 13.1 36 0.0026 20.3 1.3 23 85-107 46-68 (84)
No 1
>d2pcsa1 d.129.3.10 (A:1-147) Hypothetical protein GKP20 {Geobacillus kaustophilus [TaxId: 1462]}
Probab=63.98 E-value=7.3 Score=24.53 Aligned_cols=44 Identities=7% Similarity=0.182 Sum_probs=34.7
Q ss_pred EEeeeeccCcchhhhhcCcceeeeecCc-cceeEecCCeEEEEee
Q 032439 63 ESVRVRQLQRPLIEYMSLPASQYSVLDA-ERIERVDDNTFRCYVY 106 (140)
Q Consensus 63 ~~i~V~e~~~~L~eYLrqPa~vyALLDp-~~lerLgd~tFR~~v~ 106 (140)
.++.|+-..+.+=+.|.+|+..-..+.. +.++.+++++|..++.
T Consensus 5 ~~~~i~~~~e~v~~~l~D~~~~~~~~Pg~~~~~~~~~~~~~~~~~ 49 (147)
T d2pcsa1 5 GSIELKGTVEEVWSKLMDPSILSKCIMGCKSLELIGEDKYKADLQ 49 (147)
T ss_dssp EEEEEESCHHHHHHHHTCHHHHHHHSTTEEEEEEEETTEEEEEEE
T ss_pred ceEEeCCCHHHHHHHHcCHHHHHhhCcchhhceecCCCEEEEEEE
Confidence 3455666668889999999987777765 6699999999998877
No 2
>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=32.11 E-value=7.3 Score=20.41 Aligned_cols=11 Identities=36% Similarity=0.564 Sum_probs=8.3
Q ss_pred eeeecCCCccc
Q 032439 3 MALNCSSSTCI 13 (140)
Q Consensus 3 ~~~~~~~~~~~ 13 (140)
|...||+||--
T Consensus 1 mpykcsscsqq 11 (26)
T d2dlqa1 1 MPYKCSSCSQQ 11 (26)
T ss_dssp CSEECSSSCCE
T ss_pred CCCcccHHHHH
Confidence 55689999864
No 3
>d1v8ca2 d.129.5.1 (A:88-165) MoaD-related protein, C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=29.22 E-value=46 Score=21.09 Aligned_cols=16 Identities=13% Similarity=0.135 Sum_probs=10.2
Q ss_pred eEecCCeEEEEeeeee
Q 032439 94 ERVDDNTFRCYVYRFK 109 (140)
Q Consensus 94 erLgd~tFR~~v~~L~ 109 (140)
++.++|.||+--....
T Consensus 24 ~~e~egv~rlpga~vr 39 (78)
T d1v8ca2 24 TREGEGVYRLPGAVVR 39 (78)
T ss_dssp EEEETTEEEETTEEEE
T ss_pred ccccceEEecCCeEEE
Confidence 5668888887443333
No 4
>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}
Probab=26.78 E-value=6.7 Score=22.23 Aligned_cols=13 Identities=31% Similarity=0.751 Sum_probs=10.5
Q ss_pred eEecCCeEEEEee
Q 032439 94 ERVDDNTFRCYVY 106 (140)
Q Consensus 94 erLgd~tFR~~v~ 106 (140)
+..|+++|||++-
T Consensus 2 tkEg~~~yRC~~C 14 (37)
T d2drpa1 2 TKEGEHTYRCKVC 14 (37)
T ss_dssp EEEETTEEECTTT
T ss_pred ccccCcEEEeehh
Confidence 5678999999864
No 5
>d1ncna_ b.1.1.1 (A:) CD86 (b7-2), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.23 E-value=35 Score=20.47 Aligned_cols=17 Identities=12% Similarity=0.442 Sum_probs=13.3
Q ss_pred ccceeEecCCeEEEEee
Q 032439 90 AERIERVDDNTFRCYVY 106 (140)
Q Consensus 90 p~~lerLgd~tFR~~v~ 106 (140)
-+.++.-|+|+|+|.+.
T Consensus 73 I~~v~~~D~G~Y~C~V~ 89 (110)
T d1ncna_ 73 LHNLQIKDKGLYQCIIH 89 (110)
T ss_dssp ECSCCGGGCEEEEEEEE
T ss_pred ECCCChhHCEEEEEEEE
Confidence 45566679999999984
No 6
>d1pkoa_ b.1.1.1 (A:) Myelin oligodendrocyte glycoprotein (MOG) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=23.06 E-value=39 Score=20.39 Aligned_cols=34 Identities=15% Similarity=0.417 Sum_probs=21.4
Q ss_pred cCccceeEecCCeEEEEeeeeeEEEEEEceEEEEEEE
Q 032439 88 LDAERIERVDDNTFRCYVYRFKFFAFEICPVLLVRVE 124 (140)
Q Consensus 88 LDp~~lerLgd~tFR~~v~~L~ff~leV~PVVdLrV~ 124 (140)
|--+.++.-|+|+|+|.+..-.. .-.=.+.|.|.
T Consensus 83 L~I~~v~~~D~G~Y~C~v~~~~~---~~~~~v~L~V~ 116 (126)
T d1pkoa_ 83 LRIQNVRFSDEGGYTCFFRDHSY---QEEAAVELKVE 116 (126)
T ss_dssp EEESSCCGGGCEEEEEEEEETTE---EEEEEEEEEEE
T ss_pred EEEEEEchhHCeEEEEEEEECCC---EEEEEEEEEEe
Confidence 44455666799999999864322 22344566664
No 7
>d1dr9a1 b.1.1.1 (A:1-105) CD80, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.97 E-value=46 Score=19.88 Aligned_cols=19 Identities=21% Similarity=0.606 Sum_probs=14.1
Q ss_pred ccceeEecCCeEEEEeeee
Q 032439 90 AERIERVDDNTFRCYVYRF 108 (140)
Q Consensus 90 p~~lerLgd~tFR~~v~~L 108 (140)
-+.++.-|+|+|+|.+..-
T Consensus 69 I~~v~~~D~G~Y~C~V~~~ 87 (105)
T d1dr9a1 69 ILALRPSDEGTYECVVLKY 87 (105)
T ss_dssp ECSCCGGGCEEEEEEEEEC
T ss_pred ECcCChHHCeEEEEEEEeC
Confidence 3456666999999998643
No 8
>d1exta3 g.24.1.1 (A:116-172) Tumor necrosis factor (TNF) receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.37 E-value=32 Score=20.99 Aligned_cols=12 Identities=33% Similarity=0.288 Sum_probs=10.6
Q ss_pred ecCCCccceeee
Q 032439 6 NCSSSTCITFSY 17 (140)
Q Consensus 6 ~~~~~~~~~~~~ 17 (140)
|||.|-+.||+.
T Consensus 1 nCSlC~NGTV~i 12 (57)
T d1exta3 1 NCSLCLNGTVHL 12 (57)
T ss_dssp ECCCCTTEEEEE
T ss_pred CCccccCCeEEe
Confidence 899999999875
No 9
>d1qfoa_ b.1.1.1 (A:) N-terminal domain of sialoadhesin {Mouse (Mus musculus) [TaxId: 10090]}
Probab=13.62 E-value=40 Score=19.67 Aligned_cols=37 Identities=14% Similarity=-0.042 Sum_probs=21.3
Q ss_pred cCccceeEecCCeEEEEeeeeeEEEEEEceEEEEEEE
Q 032439 88 LDAERIERVDDNTFRCYVYRFKFFAFEICPVLLVRVE 124 (140)
Q Consensus 88 LDp~~lerLgd~tFR~~v~~L~ff~leV~PVVdLrV~ 124 (140)
|--+.++.-|.|+|.|.+..-.=-.+...+-+.|.|.
T Consensus 81 L~I~~v~~~DsG~Y~C~v~~~~~~~~~~~~~~~ltVt 117 (118)
T d1qfoa_ 81 LLLKDLKPEDSGTYNFRFEISDSNRWLDVKGTTVTVT 117 (118)
T ss_dssp EEECSCCGGGCEEEEEEEECC-CCEEECSSCEEEEEE
T ss_pred EEECCCChhHCEEEEEEEEeCCCCeEEcCCCEEEEEe
Confidence 3345566679999999875333223344455555553
No 10
>d2oz4a3 b.1.1.4 (A:367-450) Intercellular adhesion molecule-1, ICAM-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=13.06 E-value=36 Score=20.33 Aligned_cols=23 Identities=13% Similarity=0.261 Sum_probs=16.5
Q ss_pred eeecCccceeEecCCeEEEEeee
Q 032439 85 YSVLDAERIERVDDNTFRCYVYR 107 (140)
Q Consensus 85 yALLDp~~lerLgd~tFR~~v~~ 107 (140)
...++...+++-+.|+|+|.+.-
T Consensus 46 ~~~~~~~~v~~~d~G~Y~C~A~N 68 (84)
T d2oz4a3 46 LPIGESVTVTRDLEGTYLCRARS 68 (84)
T ss_dssp CCTTSCEECCGGGCEEEEEEEEE
T ss_pred eeeeeeeccccCCCCEEEEEEEc
Confidence 33444556667789999999883
Done!