Query 032446
Match_columns 140
No_of_seqs 314 out of 1273
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 23:22:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032446.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032446hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2kci_A Putative acyl carrier p 99.8 6.5E-20 2.2E-24 124.3 7.9 77 61-138 2-79 (87)
2 2l9f_A CALE8, meacp; transfera 99.8 2.1E-19 7E-24 125.1 9.3 79 59-139 12-93 (102)
3 2ava_A ACP I, acyl carrier pro 99.8 7.1E-19 2.4E-23 115.8 9.9 82 58-139 1-82 (82)
4 2kjs_A Putative acyl carrier p 99.8 5.1E-19 1.7E-23 119.7 8.7 76 62-138 3-79 (87)
5 3gzm_A Acyl carrier protein; h 99.8 6.9E-19 2.3E-23 116.1 7.6 78 58-136 2-80 (81)
6 1vku_A Acyl carrier protein; T 99.8 1.4E-18 4.6E-23 120.3 8.8 82 56-138 12-93 (100)
7 1af8_A Actinorhodin polyketide 99.8 5E-19 1.7E-23 117.7 6.3 82 57-139 1-86 (86)
8 2kwl_A ACP, acyl carrier prote 99.8 1.5E-18 5.1E-23 114.9 8.6 79 56-135 4-83 (84)
9 2lol_A ACP, acyl carrier prote 99.8 3.7E-18 1.3E-22 112.0 9.4 78 57-135 2-80 (81)
10 4dxe_H ACP, acyl carrier prote 99.8 9.7E-19 3.3E-23 121.3 6.5 79 56-135 21-100 (101)
11 3ejb_A Acyl carrier protein; p 99.8 1.2E-18 4E-23 119.6 6.5 79 56-135 17-96 (97)
12 2l4b_A Acyl carrier protein; i 99.8 6.2E-19 2.1E-23 117.9 4.9 80 56-136 3-86 (88)
13 2dnw_A Acyl carrier protein; A 99.8 3.1E-18 1.1E-22 117.3 8.4 84 55-139 9-93 (99)
14 1f80_D Acyl carrier protein; t 99.7 1.1E-18 3.7E-23 114.6 5.4 78 56-134 2-80 (81)
15 1x3o_A Acyl carrier protein; s 99.7 4.3E-18 1.5E-22 110.9 8.2 78 57-135 1-79 (80)
16 3ce7_A Specific mitochodrial a 99.7 6.6E-18 2.3E-22 118.1 8.6 81 57-139 15-101 (107)
17 1dv5_A APO-DCP, APO-D-alanyl c 99.7 3.6E-18 1.2E-22 112.9 6.8 76 58-134 1-79 (80)
18 2cnr_A FAS, ACP, acyl carrier 99.7 9.2E-18 3.1E-22 110.0 8.4 79 56-135 2-81 (82)
19 2qnw_A Acyl carrier protein; m 99.7 8.7E-18 3E-22 110.8 8.1 78 57-135 3-81 (82)
20 2kw2_A Specialized acyl carrie 99.7 9.2E-18 3.2E-22 115.7 8.2 79 61-140 3-93 (101)
21 2lki_A Putative uncharacterize 99.7 6.2E-18 2.1E-22 118.0 7.4 84 51-135 14-103 (105)
22 1klp_A ACP, ACPM, meromycolate 99.7 1.4E-17 4.8E-22 117.1 8.6 82 56-138 2-84 (115)
23 2jq4_A AGR_C_4658P, hypothetic 99.7 1.3E-17 4.4E-22 116.1 7.4 83 56-139 17-103 (105)
24 2cgq_A Acyl carrier protein AC 99.7 3.9E-18 1.3E-22 120.7 4.4 82 51-139 21-103 (113)
25 2lte_A Specialized acyl carrie 99.5 7E-19 2.4E-23 122.3 0.0 85 51-137 14-101 (103)
26 1l0i_A Acyl carrier protein; a 99.7 3.5E-17 1.2E-21 106.5 6.3 74 61-135 3-77 (78)
27 2amw_A Hypothetical protein NE 99.7 6.6E-17 2.3E-21 107.0 7.4 74 61-135 2-81 (83)
28 1nq4_A Oxytetracycline polyket 99.7 8E-17 2.7E-21 109.9 7.3 78 62-139 5-85 (95)
29 2ehs_A ACP, acyl carrier prote 99.6 3E-16 1E-20 101.3 7.2 73 62-135 2-75 (77)
30 1or5_A Acyl carrier protein; A 99.6 1.4E-17 4.9E-22 109.9 0.8 76 60-135 3-80 (83)
31 1fh1_A NODF, nodulation protei 99.6 2E-17 6.9E-22 112.0 -1.2 80 60-139 3-92 (92)
32 2l3v_A ACP, acyl carrier prote 99.6 4.9E-17 1.7E-21 105.9 -0.1 74 61-135 4-78 (79)
33 2liu_A CURA; holo state, trans 99.6 1.2E-14 4E-19 97.9 9.2 83 56-139 16-98 (99)
34 2afd_A Protein ASL1650; twiste 99.6 1.4E-14 4.7E-19 95.4 9.3 79 56-135 9-87 (88)
35 2kr5_A PKS, aflatoxin biosynth 99.5 2.4E-14 8.1E-19 95.0 7.4 76 57-133 7-84 (89)
36 2cg5_B Fatty acid synthase; tr 99.5 1E-13 3.6E-18 94.5 7.5 70 64-134 9-78 (91)
37 2ju1_A Erythronolide synthase; 99.5 7.6E-14 2.6E-18 93.6 5.9 76 59-135 18-94 (95)
38 2l22_A Mupirocin didomain acyl 99.4 1.6E-13 5.6E-18 104.6 6.5 81 55-136 20-100 (212)
39 4i4d_A Peptide synthetase NRPS 99.4 3.8E-13 1.3E-17 90.7 7.2 78 58-138 13-90 (93)
40 1dny_A Non-ribosomal peptide s 99.4 1E-12 3.4E-17 88.6 7.1 75 57-134 10-84 (91)
41 2l22_A Mupirocin didomain acyl 99.4 3.9E-12 1.3E-16 97.0 9.8 79 58-137 127-205 (212)
42 2cq8_A 10-formyltetrahydrofola 99.1 1.7E-10 5.7E-15 81.1 6.8 76 58-136 22-99 (110)
43 3tej_A Enterobactin synthase c 98.9 1.8E-09 6.2E-14 86.1 7.4 75 57-134 7-81 (329)
44 2jgp_A Tyrocidine synthetase 3 98.7 4.5E-08 1.6E-12 81.8 8.0 75 57-134 6-80 (520)
45 2fq1_A Isochorismatase; ENTB, 98.5 1.7E-07 5.7E-12 74.5 5.5 66 64-132 218-283 (287)
46 2vsq_A Surfactin synthetase su 98.4 4.3E-07 1.5E-11 84.5 8.1 75 57-134 968-1042(1304)
47 4f6l_B AUSA reductase domain p 98.3 8.7E-08 3E-12 80.7 0.0 75 57-135 41-115 (508)
48 4dg8_A PA1221; ANL superfamily 98.2 2.4E-07 8.2E-12 80.2 0.0 74 58-134 521-595 (620)
49 3rg2_A Enterobactin synthase c 98.1 2.8E-06 9.6E-11 73.0 4.6 72 61-135 545-616 (617)
50 2vz8_A Fatty acid synthase; tr 97.6 1.1E-05 3.8E-10 79.8 0.0 71 63-134 2125-2195(2512)
51 2px6_A Thioesterase domain; th 90.9 0.044 1.5E-06 42.5 0.1 37 92-128 1-37 (316)
52 1dd4_C 50S ribosomal protein L 83.9 0.81 2.8E-05 26.0 2.5 20 93-112 13-32 (40)
53 3zen_D Fatty acid synthase; tr 77.2 0.48 1.6E-05 48.4 0.0 53 62-115 1795-1848(3089)
54 1zav_U 50S ribosomal protein L 74.1 2.4 8.3E-05 22.4 2.3 16 95-110 15-30 (30)
55 3ufe_A Transcriptional antiter 41.4 15 0.00052 23.6 2.2 21 98-118 79-99 (111)
56 3s93_A Tudor domain-containing 41.2 56 0.0019 21.7 5.1 47 57-106 3-62 (102)
57 2pls_A CBS domain protein; APC 37.3 36 0.0012 21.3 3.5 28 103-130 20-48 (86)
58 2oai_A Hemolysin; PFAM03471, x 34.5 32 0.0011 22.0 2.9 29 102-130 28-56 (94)
59 1uhr_A SWI/SNF related, matrix 34.3 31 0.0011 22.5 2.8 56 55-110 25-83 (93)
60 3lae_A UPF0053 protein HI0107; 34.2 41 0.0014 20.8 3.4 24 103-129 20-43 (81)
61 1v32_A AT5G08430, hypothetical 32.9 32 0.0011 22.9 2.7 57 56-112 34-93 (101)
62 2zjq_5 50S ribosomal protein L 32.5 27 0.00093 24.3 2.4 21 93-113 15-35 (122)
63 3llb_A Uncharacterized protein 32.4 45 0.0015 20.7 3.3 25 103-130 20-44 (83)
64 2j01_L 50S ribosomal protein L 32.4 27 0.00094 24.3 2.4 20 94-113 16-35 (125)
65 2rk5_A Putative hemolysin; str 32.3 44 0.0015 20.9 3.3 24 103-129 19-42 (87)
66 2p3h_A Uncharacterized CBS dom 31.1 46 0.0016 21.9 3.3 25 103-130 23-47 (101)
67 3b1l_X E3 ubiquitin-protein li 36.4 11 0.00037 22.6 0.0 48 58-105 18-73 (76)
68 2bnk_A Early protein GP16.7; D 29.6 58 0.002 19.9 3.2 33 104-136 14-51 (67)
69 2pag_A Hypothetical protein; n 28.8 28 0.00095 24.0 2.0 18 99-116 24-41 (135)
70 2ftc_E L12MT, MRP-L12, 39S rib 28.3 36 0.0012 24.0 2.5 19 94-112 14-32 (137)
71 2p13_A CBS domain; alpha-beta 27.7 62 0.0021 20.3 3.4 28 102-130 25-52 (90)
72 3rio_A PTSGHI operon antitermi 27.5 35 0.0012 24.5 2.4 21 98-118 147-167 (180)
73 2pli_A Uncharacterized protein 27.3 61 0.0021 20.4 3.3 26 102-130 28-53 (91)
74 1dd3_A 50S ribosomal protein L 27.2 27 0.00094 24.5 1.7 20 93-112 13-32 (128)
75 3u5e_m 60S ribosomal protein L 27.2 13 0.00045 25.2 0.0 48 58-105 18-73 (128)
76 3ded_A Probable hemolysin; str 26.9 62 0.0021 21.5 3.4 30 102-131 45-76 (113)
77 2r2z_A Hemolysin; APC85144, en 26.8 61 0.0021 20.4 3.3 26 102-130 26-51 (93)
78 2hfk_A Pikromycin, type I poly 25.8 3 0.0001 32.0 -4.0 42 56-110 23-64 (319)
79 2p4p_A Hypothetical protein HD 25.2 68 0.0023 19.9 3.2 26 103-130 20-46 (86)
80 3u5c_f 40S ribosomal protein S 23.4 17 0.00058 25.8 0.0 49 58-106 18-74 (152)
81 3a9j_A Ubiquitin; protein comp 23.2 52 0.0018 19.1 2.3 37 58-94 18-62 (76)
82 1otf_A 4-oxalocrotonate tautom 23.1 73 0.0025 17.8 2.9 21 58-78 15-35 (62)
83 2opa_A Probable tautomerase YW 23.0 75 0.0026 17.7 2.9 21 58-78 15-35 (61)
84 3m20_A 4-oxalocrotonate tautom 22.6 92 0.0032 17.8 3.3 21 58-78 14-34 (62)
85 2dzi_A Ubiquitin-like protein 22.0 59 0.002 19.3 2.4 37 58-94 25-69 (81)
86 3n3k_B Ubiquitin; hydrolase, p 21.8 68 0.0023 19.1 2.7 38 58-95 21-66 (85)
87 2kd0_A LRR repeats and ubiquit 21.3 68 0.0023 19.8 2.6 37 58-94 29-73 (85)
88 1ndd_A NEDD8, protein (ubiquit 21.3 62 0.0021 18.7 2.3 37 58-94 18-62 (76)
89 3abf_A 4-oxalocrotonate tautom 20.4 78 0.0027 17.8 2.6 21 58-78 16-36 (64)
90 1v31_A Hypothetical protein RA 20.4 33 0.0011 22.3 0.9 56 55-110 25-83 (93)
No 1
>2kci_A Putative acyl carrier protein; alpha, ACP, PCP, structural genomics, unknown function, PSI- 2, protein structure initiative; NMR {Geobacter metallireducens gs-15} PDB: 2kjs_A* 2lml_A* 2kwm_A*
Probab=99.81 E-value=6.5e-20 Score=124.33 Aligned_cols=77 Identities=26% Similarity=0.347 Sum_probs=72.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCcc-ccCCChhhHHHHHHHHHHHhCCccCccccccCCcHHHHHHHHHHHHHhh
Q 032446 61 ETVQKVCEIVRRQLALPAETELTSESKFS-ALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKLVEKK 138 (140)
Q Consensus 61 ei~~~v~~ii~e~l~i~~~~~I~~d~~l~-dLGlDSLd~vELv~~lEeefgI~i~~~~l~~~~TV~dl~~~I~~~~~~k 138 (140)
++.++|++++++++++++ .+++++++|. ++|||||++++|+++||++|||+||++++.++.||+++++||.++++.|
T Consensus 2 ~i~ekv~~il~e~l~~d~-~~i~~d~~l~~dlg~DSL~~veli~~lE~eF~I~i~~ed~~~~~Tv~dlv~~I~~~~~~~ 79 (87)
T 2kci_A 2 PTLDALTPIFRQVFDDDS-IVLTRETSANDIDAWDSLSHMNLIVSLEVHYKIKFALGELQKLKNVGDLADLVDKKLARK 79 (87)
T ss_dssp CSHHHHHHHHHHHTTCSC-CCCCTTCCSTTCCCCCSTHHHHHHHHHHHHHTCCCCHHHHTTCCSHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhCCCH-HHCCCCCCcccccCCChHHHHHHHHHHHHHHCCccCHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 478999999999999988 6999999999 6999999999999999999999999999999999999999999988765
No 2
>2l9f_A CALE8, meacp; transferase, acyl carrier protein; NMR {Micromonospora echinospora}
Probab=99.80 E-value=2.1e-19 Score=125.07 Aligned_cols=79 Identities=22% Similarity=0.319 Sum_probs=73.0
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCCCCCCCcc-ccCCChhhHHHHHHHHHHHhCCccCccccccC--CcHHHHHHHHHHHH
Q 032446 59 KPETVQKVCEIVRRQLALPAETELTSESKFS-ALGADSLDTVEIVMSLEEEFGIGVEEENSQNI--TTVQEAADLIEKLV 135 (140)
Q Consensus 59 ~~ei~~~v~~ii~e~l~i~~~~~I~~d~~l~-dLGlDSLd~vELv~~lEeefgI~i~~~~l~~~--~TV~dl~~~I~~~~ 135 (140)
..+|.++|++++++++++++ +.|+++++|. |||+|||+++||++.+|++||+++|++ ..++ .||+++++||+++.
T Consensus 12 ~~~I~~~V~~ilaE~lev~~-e~Vtpda~l~dDLglDSLd~VeLVm~lE~~fGi~ipd~-~e~~~~~TV~d~vdyI~~~~ 89 (102)
T 2l9f_A 12 ATGALELVRHLVAERAELPV-EVLRDDSRFLDDLHMSSITVGQLVNEAARAMGLSAVAM-PTNFATATVREMAEALEARE 89 (102)
T ss_dssp SCCHHHHHHHHHHHHTTSCS-SSCCTTCBTTTTSCCCHHHHHHHHHHHHHHHTCSTTSS-CSCCTTCBHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCH-HHcCCCcchhhhcCCcHHHHHHHHHHHHHHhCCCCCcc-HHHHHHccHHHHHHHHHHhh
Confidence 45899999999999999999 6999999999 999999999999999999999999887 6667 99999999999998
Q ss_pred Hhhc
Q 032446 136 EKKA 139 (140)
Q Consensus 136 ~~k~ 139 (140)
++++
T Consensus 90 ~~~~ 93 (102)
T 2l9f_A 90 REAP 93 (102)
T ss_dssp HTCC
T ss_pred cccc
Confidence 7654
No 3
>2ava_A ACP I, acyl carrier protein I, chloroplast; four-helix-bundle, biosynthetic protein; NMR {Spinacia oleracea} PDB: 2fva_A* 2fve_A 2fvf_A* 2xz0_D* 2xz1_C*
Probab=99.79 E-value=7.1e-19 Score=115.82 Aligned_cols=82 Identities=63% Similarity=0.906 Sum_probs=76.2
Q ss_pred ChHHHHHHHHHHHHHHhCCCCCCCCCCCCCccccCCChhhHHHHHHHHHHHhCCccCccccccCCcHHHHHHHHHHHHHh
Q 032446 58 AKPETVQKVCEIVRRQLALPAETELTSESKFSALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKLVEK 137 (140)
Q Consensus 58 ~~~ei~~~v~~ii~e~l~i~~~~~I~~d~~l~dLGlDSLd~vELv~~lEeefgI~i~~~~l~~~~TV~dl~~~I~~~~~~ 137 (140)
+++++.++|++++++.++++++..++++++|.+||+|||++++|++.||++||+++|++++.++.||++++++|.+++++
T Consensus 1 ~~~~i~~~l~~i~~~~l~~~~~~~i~~~~~l~dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~~~ 80 (82)
T 2ava_A 1 AKKETIDKVSDIVKEKLALGADVVVTADSEFSKLGADSLDTVEIVMNLEEEFGINVDEDKAQDISTIQQAADVIEGLLEK 80 (82)
T ss_dssp CCHHHHHHHHHHHHHHTTCSSSSCCCSSCCSCCCTTCCSCHHHHHHHHHHHTTCCCCGGGSSSCCSHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHhCCCcccccCCCCchhhcCCCHHHHHHHHHHHHHHHCCccCHHHHHhCCCHHHHHHHHHHHHhc
Confidence 36789999999999999998622899999999999999999999999999999999999999999999999999999887
Q ss_pred hc
Q 032446 138 KA 139 (140)
Q Consensus 138 k~ 139 (140)
++
T Consensus 81 ~~ 82 (82)
T 2ava_A 81 KA 82 (82)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 4
>2kjs_A Putative acyl carrier protein; alpha, ACP, PNS, structural genomics, PSI-2, protein structure initiative; HET: PNS; NMR {Geobacter metallireducens gs-15} PDB: 2lml_A* 2kwm_A*
Probab=99.78 E-value=5.1e-19 Score=119.72 Aligned_cols=76 Identities=26% Similarity=0.356 Sum_probs=72.3
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCccc-cCCChhhHHHHHHHHHHHhCCccCccccccCCcHHHHHHHHHHHHHhh
Q 032446 62 TVQKVCEIVRRQLALPAETELTSESKFSA-LGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKLVEKK 138 (140)
Q Consensus 62 i~~~v~~ii~e~l~i~~~~~I~~d~~l~d-LGlDSLd~vELv~~lEeefgI~i~~~~l~~~~TV~dl~~~I~~~~~~k 138 (140)
+.++|++++++.+++++ ..|+++++|.| +|||||+.++|++.||++|||++|++++.+++||+++++||.+++++|
T Consensus 3 tle~l~~I~~e~l~~d~-~~i~~~~~~~d~lg~DSL~~veli~~ie~~fgi~i~~~~l~~~~TV~dl~~~I~~kl~~k 79 (87)
T 2kjs_A 3 TLDALTPIFRQVFDDDS-IVLTRETSANDIDAWDSLSHMNLIVSLEVHYKIKFALGELQKLKNVGDLADLVDKKLARK 79 (87)
T ss_dssp SHHHHHHHHHHHHTCSS-CCCCTTCCSTTCSCCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCSHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCc-cccCCCCCcccCCCCChHHHHHHHHHHHHHhCceecHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 57899999999999998 69999999995 899999999999999999999999999999999999999999999876
No 5
>3gzm_A Acyl carrier protein; helix bundle, phosphopantetheine, fatty acid biosynthesis, L synthesis, transit peptide, biosynthetic protein; HET: PNS; 1.80A {Plasmodium falciparum} SCOP: a.28.1.0 PDB: 3gzl_A* 2fq0_A* 2fq2_A*
Probab=99.77 E-value=6.9e-19 Score=116.06 Aligned_cols=78 Identities=37% Similarity=0.616 Sum_probs=73.2
Q ss_pred ChHHHHHHHHHHHHHHhCCCCCCCCCCCCCcc-ccCCChhhHHHHHHHHHHHhCCccCccccccCCcHHHHHHHHHHHHH
Q 032446 58 AKPETVQKVCEIVRRQLALPAETELTSESKFS-ALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKLVE 136 (140)
Q Consensus 58 ~~~ei~~~v~~ii~e~l~i~~~~~I~~d~~l~-dLGlDSLd~vELv~~lEeefgI~i~~~~l~~~~TV~dl~~~I~~~~~ 136 (140)
+++++.++|++++++.+++++ ++|+++++|. +||+|||++++|++.||++|||++|++++.++.||+++++||.++++
T Consensus 2 ~~~~i~~~l~~ii~~~l~~~~-~~i~~d~~l~~dlg~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~~ 80 (81)
T 3gzm_A 2 SLKSTFDDIKKIISKQLSVEE-DKIQMNSNFTKDLGADSLDLVELIMALEEKFNVTISDQDALKINTVQDAIDYIEKNNK 80 (81)
T ss_dssp CHHHHHHHHHHHHHHHHTCCG-GGCCTTCBHHHHSCCCHHHHHHHHHHHHHHHTCCCCHHHHHTCCBHHHHHHHHHHHC-
T ss_pred CHHHHHHHHHHHHHHHhCcCH-HHCCCCCcchhhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHHcCCHHHHHHHHHHHhc
Confidence 467999999999999999988 6999999995 99999999999999999999999999999999999999999998865
No 6
>1vku_A Acyl carrier protein; TM0175, structural genomics, JCSG, Pro structure initiative, PSI; 2.00A {Thermotoga maritima} SCOP: a.28.1.1
Probab=99.77 E-value=1.4e-18 Score=120.33 Aligned_cols=82 Identities=27% Similarity=0.494 Sum_probs=77.9
Q ss_pred cCChHHHHHHHHHHHHHHhCCCCCCCCCCCCCccccCCChhhHHHHHHHHHHHhCCccCccccccCCcHHHHHHHHHHHH
Q 032446 56 CSAKPETVQKVCEIVRRQLALPAETELTSESKFSALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKLV 135 (140)
Q Consensus 56 ~m~~~ei~~~v~~ii~e~l~i~~~~~I~~d~~l~dLGlDSLd~vELv~~lEeefgI~i~~~~l~~~~TV~dl~~~I~~~~ 135 (140)
.|.++++.++|+++|++.+++++ .+|+++++|.+||+|||+.+||++.||++|||+||++++.++.||+++++||.+++
T Consensus 12 ~~~~~~i~~~l~~ila~~l~v~~-~~I~~d~~L~dLGlDSL~~veL~~~LE~~fgi~i~~~~l~~~~TV~~L~~~I~~~~ 90 (100)
T 1vku_A 12 HMERKKLIAKFVEIASEKMGKDL-ETVDEENTFKELGFDSIDVIDLVMFFEDEFALRIEDEEISKIRKVKDLIDIVIKKL 90 (100)
T ss_dssp TTHHHHHHHHHHHHHHHTTCCCC-CSCCTTSBTTTTTCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHHHHCCCH-HHCCCCCCHHHcCCchHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHHHh
Confidence 58899999999999999999988 69999999999999999999999999999999999999999999999999999987
Q ss_pred Hhh
Q 032446 136 EKK 138 (140)
Q Consensus 136 ~~k 138 (140)
+++
T Consensus 91 ~~~ 93 (100)
T 1vku_A 91 EEI 93 (100)
T ss_dssp HHC
T ss_pred hhh
Confidence 654
No 7
>1af8_A Actinorhodin polyketide synthase acyl carrier Pro; acyl carrier protein, solution STR antibiotic biosynthesis; NMR {Streptomyces coelicolor} SCOP: a.28.1.1 PDB: 2af8_A 2k0x_A* 2k0y_A 2kg6_A* 2kg8_A* 2kg9_A* 2kga_A* 2kgc_A* 2kgd_A* 2kge_A*
Probab=99.77 E-value=5e-19 Score=117.66 Aligned_cols=82 Identities=21% Similarity=0.270 Sum_probs=75.0
Q ss_pred CChHHHHHHHHHHHHHHhCCCCCC----CCCCCCCccccCCChhhHHHHHHHHHHHhCCccCccccccCCcHHHHHHHHH
Q 032446 57 SAKPETVQKVCEIVRRQLALPAET----ELTSESKFSALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIE 132 (140)
Q Consensus 57 m~~~ei~~~v~~ii~e~l~i~~~~----~I~~d~~l~dLGlDSLd~vELv~~lEeefgI~i~~~~l~~~~TV~dl~~~I~ 132 (140)
|+++.+.++|++++++.+++++ . +++++++|.+||+|||++++|+..||++|||++|++++.++.||+++++||.
T Consensus 1 M~~~~~~~~l~~il~~~l~~~~-~~~~~~i~~~~~l~dlG~DSL~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~ 79 (86)
T 1af8_A 1 MATLLTTDDLRRALVECAGETD-GTDLSGDFLDLRFEDIGYDSLALMETAARLESRYGVSIPDDVAGRVDTPRELLDLIN 79 (86)
T ss_dssp CCCSSCHHHHHHHHHTTCCCCS-CCCTTTCSSTTSTTTTTCCTTTHHHHHHHHTTTTCSCCCTTTTTTCCSHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHhCCCc-ccccccCCCCCChhhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHcCCCHHHHHHHHH
Confidence 5567788999999999999986 4 6889999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhc
Q 032446 133 KLVEKKA 139 (140)
Q Consensus 133 ~~~~~k~ 139 (140)
+++++++
T Consensus 80 ~~~~~~~ 86 (86)
T 1af8_A 80 GALAEAA 86 (86)
T ss_dssp HHHHHHC
T ss_pred HHhhccC
Confidence 9887653
No 8
>2kwl_A ACP, acyl carrier protein; structural genomics, seattle structura genomics center for infectious disease, ssgcid, lipid bindi protein; NMR {Borrelia burgdorferi}
Probab=99.77 E-value=1.5e-18 Score=114.88 Aligned_cols=79 Identities=33% Similarity=0.467 Sum_probs=75.1
Q ss_pred cCChHHHHHHHHHHHHHHhCCCCCCCCCCCCCc-cccCCChhhHHHHHHHHHHHhCCccCccccccCCcHHHHHHHHHHH
Q 032446 56 CSAKPETVQKVCEIVRRQLALPAETELTSESKF-SALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKL 134 (140)
Q Consensus 56 ~m~~~ei~~~v~~ii~e~l~i~~~~~I~~d~~l-~dLGlDSLd~vELv~~lEeefgI~i~~~~l~~~~TV~dl~~~I~~~ 134 (140)
.|+++++.++|++++++.+++++ .+++++++| .+||+|||++++|++.||++||+++|++++.++.||++++++|.++
T Consensus 4 ~m~~~~i~~~l~~~i~~~l~~~~-~~i~~~~~l~~dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~ 82 (84)
T 2kwl_A 4 SMDNDEIFSKVRSIISEQLDKKE-DEITTDSRFVEDLNADSLDIYELLYLLEEAFDDKIPENEANEFETVGDVVNFIKKR 82 (84)
T ss_dssp CSTHHHHHHHHHHHHHHHHCCCG-GGCCTTTHHHHTSSSCHHHHHHHHHHHHHHHTCCTTTTGGGGCSSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhCCCc-ccCCCCCchhhhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHHCCCHHHHHHHHHHH
Confidence 48999999999999999999987 689999999 6999999999999999999999999999999999999999999887
Q ss_pred H
Q 032446 135 V 135 (140)
Q Consensus 135 ~ 135 (140)
+
T Consensus 83 ~ 83 (84)
T 2kwl_A 83 K 83 (84)
T ss_dssp H
T ss_pred c
Confidence 5
No 9
>2lol_A ACP, acyl carrier protein; lipid transport; NMR {Rickettsia prowazekii str}
Probab=99.76 E-value=3.7e-18 Score=111.96 Aligned_cols=78 Identities=36% Similarity=0.547 Sum_probs=73.7
Q ss_pred CChHHHHHHHHHHHHHHhCCCCCCCCCCCCCcc-ccCCChhhHHHHHHHHHHHhCCccCccccccCCcHHHHHHHHHHHH
Q 032446 57 SAKPETVQKVCEIVRRQLALPAETELTSESKFS-ALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKLV 135 (140)
Q Consensus 57 m~~~ei~~~v~~ii~e~l~i~~~~~I~~d~~l~-dLGlDSLd~vELv~~lEeefgI~i~~~~l~~~~TV~dl~~~I~~~~ 135 (140)
|+++++.++|++++++.+++++ ++++++++|+ ++|+|||++++++..||++||+++|.+++.++.||++++++|.+++
T Consensus 2 m~~~~i~~~l~~ii~~~l~~~~-~~i~~~~~l~~dlG~DSl~~~el~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~ 80 (81)
T 2lol_A 2 STTDKIEQKVIEMVAEKLNKDK-AIITTDSRFIEDLKADSLDTVELMMAIEVEYGIDIPDDEATKIKTVSDVIKYIKERQ 80 (81)
T ss_dssp CSHHHHHHHHHHHHHHHSCCCT-TTCCTTCCHHHHTTCCHHHHHHHHHHHHHHHCCCCCGGGGGGSSSHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHHHCCCh-hhCCCCCcHHHhcCCcHHHHHHHHHHHHHHHCCCCCHHHHHHcCCHHHHHHHHHHhc
Confidence 6789999999999999999987 6899999995 9999999999999999999999999999999999999999998763
No 10
>4dxe_H ACP, acyl carrier protein; acyl-carrier-protein synthase, type II acid synthesis pathway; 2.51A {Staphylococcus aureus}
Probab=99.76 E-value=9.7e-19 Score=121.25 Aligned_cols=79 Identities=39% Similarity=0.614 Sum_probs=70.6
Q ss_pred cCChHHHHHHHHHHHHHHhCCCCCCCCCCCCCc-cccCCChhhHHHHHHHHHHHhCCccCccccccCCcHHHHHHHHHHH
Q 032446 56 CSAKPETVQKVCEIVRRQLALPAETELTSESKF-SALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKL 134 (140)
Q Consensus 56 ~m~~~ei~~~v~~ii~e~l~i~~~~~I~~d~~l-~dLGlDSLd~vELv~~lEeefgI~i~~~~l~~~~TV~dl~~~I~~~ 134 (140)
.|++.++.++|+++|++.+++++ ++|+++++| .|||+|||+.+||+..||++|||++|++++.++.||+++++||.++
T Consensus 21 ~m~~mei~~~l~~iiae~l~~~~-~~I~~d~~l~~dLGlDSL~~veLi~~lE~~fgi~i~~~~l~~~~Tv~dl~~~I~~~ 99 (101)
T 4dxe_H 21 QSNAMENFDKVKDIIVDRLGVDA-DKVTEDASFKDDLGADSLDIAELVMELEDEFGTEIPDEEAEKINTVGDAVKFINSL 99 (101)
T ss_dssp ---CTTHHHHHHHHHHHTTCCCG-GGCCTTCBTTTTSCCCHHHHHHHHHHHHHHTTCCCCHHHHTTCCBHHHHHHHHC--
T ss_pred hcCHHHHHHHHHHHHHHHHCcCh-hhCCCCCcchhhcCCCcHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHHc
Confidence 57788999999999999999988 699999999 5999999999999999999999999999999999999999999865
Q ss_pred H
Q 032446 135 V 135 (140)
Q Consensus 135 ~ 135 (140)
.
T Consensus 100 ~ 100 (101)
T 4dxe_H 100 E 100 (101)
T ss_dssp -
T ss_pred c
Confidence 3
No 11
>3ejb_A Acyl carrier protein; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Escherichia coli} SCOP: a.28.1.1 PDB: 3ejd_A* 3eje_A*
Probab=99.75 E-value=1.2e-18 Score=119.65 Aligned_cols=79 Identities=43% Similarity=0.585 Sum_probs=73.6
Q ss_pred cCChHHHHHHHHHHHHHHhCCCCCCCCCCCCCcc-ccCCChhhHHHHHHHHHHHhCCccCccccccCCcHHHHHHHHHHH
Q 032446 56 CSAKPETVQKVCEIVRRQLALPAETELTSESKFS-ALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKL 134 (140)
Q Consensus 56 ~m~~~ei~~~v~~ii~e~l~i~~~~~I~~d~~l~-dLGlDSLd~vELv~~lEeefgI~i~~~~l~~~~TV~dl~~~I~~~ 134 (140)
.++++++.++|+++|++.+++++ ++|+++++|. |||+|||+++||++.||++|||+++++++.++.||+++++||.++
T Consensus 17 ~~t~~~i~~~l~~iia~~l~~~~-~~i~~d~~l~~dLGlDSL~~vel~~~lE~~fgi~i~~~~l~~~~Tv~~l~~~i~~~ 95 (97)
T 3ejb_A 17 GSHMSTIEERVKKIIGEQLGVKQ-EEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGH 95 (97)
T ss_dssp -CCCCCHHHHHHHHHHHHSCCCT-TTSCTTCBTTTTTCCCTTHHHHHHHHHHHHTTCCCCHHHHHHCCBHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHHHHCcCH-HHCCCCCCchhhcCCCHHHHHHHHHHHHHHHCCCCCHHHHHhCCCHHHHHHHHHHh
Confidence 57888999999999999999988 6999999995 999999999999999999999999999999999999999999876
Q ss_pred H
Q 032446 135 V 135 (140)
Q Consensus 135 ~ 135 (140)
+
T Consensus 96 ~ 96 (97)
T 3ejb_A 96 Q 96 (97)
T ss_dssp -
T ss_pred c
Confidence 4
No 12
>2l4b_A Acyl carrier protein; infectious disease, human granulocytic anaplasmosis, ssgcid, structural genomics; NMR {Anaplasma phagocytophilum}
Probab=99.75 E-value=6.2e-19 Score=117.93 Aligned_cols=80 Identities=28% Similarity=0.392 Sum_probs=74.5
Q ss_pred cCChHHHHHHHHHHHHHHh---CCCCCCCCCCCCCc-cccCCChhhHHHHHHHHHHHhCCccCccccccCCcHHHHHHHH
Q 032446 56 CSAKPETVQKVCEIVRRQL---ALPAETELTSESKF-SALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLI 131 (140)
Q Consensus 56 ~m~~~ei~~~v~~ii~e~l---~i~~~~~I~~d~~l-~dLGlDSLd~vELv~~lEeefgI~i~~~~l~~~~TV~dl~~~I 131 (140)
.|+++++.++|+++|++.+ ++++ .+|+++++| .+||+|||++++|++.||++|||+++++++.++.||+++++||
T Consensus 3 ~m~~~~i~~~v~~~i~~~l~~~~~~~-~~i~~d~~l~~dlglDSl~~vel~~~lE~~fgi~i~~~~~~~~~Tv~~l~~~i 81 (88)
T 2l4b_A 3 SMVSEEIKAQVMESVIGCLKLNDEQK-QILSGTTNLAKDFNLDSLDFVDLIMSLEERFSLEISDEDAQKLETVDDICRYI 81 (88)
T ss_dssp SSSCHHHHHHHHHHHHHHHTCCHHHH-HSCCTTSCTTTTTTCCHHHHHHHHHHHHHHTTCCCCHHHHHTCCSHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhhCCCCH-hhCCCCCchhhccCCcHHHHHHHHHHHHHHHCCCcCHHHHHHcCCHHHHHHHH
Confidence 3889999999999999999 7766 589999999 5999999999999999999999999999999999999999999
Q ss_pred HHHHH
Q 032446 132 EKLVE 136 (140)
Q Consensus 132 ~~~~~ 136 (140)
.++++
T Consensus 82 ~~~~~ 86 (88)
T 2l4b_A 82 ASKSS 86 (88)
T ss_dssp HHHSS
T ss_pred HHhhc
Confidence 98764
No 13
>2dnw_A Acyl carrier protein; ACP, fatty acid biosynthesis, mitochondria, NADH:ubiquinone oxidereductase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.75 E-value=3.1e-18 Score=117.33 Aligned_cols=84 Identities=26% Similarity=0.393 Sum_probs=78.2
Q ss_pred ccCChHHHHHHHHHHHHHHhCCCCCCCCCCCCCcc-ccCCChhhHHHHHHHHHHHhCCccCccccccCCcHHHHHHHHHH
Q 032446 55 SCSAKPETVQKVCEIVRRQLALPAETELTSESKFS-ALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEK 133 (140)
Q Consensus 55 ~~m~~~ei~~~v~~ii~e~l~i~~~~~I~~d~~l~-dLGlDSLd~vELv~~lEeefgI~i~~~~l~~~~TV~dl~~~I~~ 133 (140)
..|+++++.++|++++++.+++++ .+|+++++|. |||+|||++++|+..||++|||+|+++++.++.||+++++||.+
T Consensus 9 ~~m~~~~i~~~l~~~l~~~l~~~~-~~i~~d~~l~~dlG~DSL~~vel~~~le~~fgi~i~~~~l~~~~Tv~~l~~~i~~ 87 (99)
T 2dnw_A 9 PPLTLEGIQDRVLYVLKLYDKIDP-EKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFGFEIPDIDAEKLMCPQEIVDYIAD 87 (99)
T ss_dssp CCCCHHHHHHHHHHHHHHCTTSCT-TTCCTTCCCCCCCCCCHHHHHHHHHHHHHHTTCCCCHHHHTTCCSHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCH-hhCCCCCchhhhcCCCHHHHHHHHHHHHHHHCCCCCHHHHHhCCCHHHHHHHHHH
Confidence 468899999999999999999987 6899999995 99999999999999999999999999999999999999999998
Q ss_pred HHHhhc
Q 032446 134 LVEKKA 139 (140)
Q Consensus 134 ~~~~k~ 139 (140)
+++.++
T Consensus 88 ~~~~~~ 93 (99)
T 2dnw_A 88 KKDVYE 93 (99)
T ss_dssp HCCSCS
T ss_pred Hhcccc
Confidence 876554
No 14
>1f80_D Acyl carrier protein; transferase; HET: PN2; 2.30A {Bacillus subtilis} SCOP: a.28.1.1 PDB: 2x2b_A* 1hy8_A
Probab=99.75 E-value=1.1e-18 Score=114.56 Aligned_cols=78 Identities=33% Similarity=0.609 Sum_probs=70.5
Q ss_pred cCChHHHHHHHHHHHHHHhCCCCCCCCCCCCCc-cccCCChhhHHHHHHHHHHHhCCccCccccccCCcHHHHHHHHHHH
Q 032446 56 CSAKPETVQKVCEIVRRQLALPAETELTSESKF-SALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKL 134 (140)
Q Consensus 56 ~m~~~ei~~~v~~ii~e~l~i~~~~~I~~d~~l-~dLGlDSLd~vELv~~lEeefgI~i~~~~l~~~~TV~dl~~~I~~~ 134 (140)
.|+++++.++|++++++.+++++ ++++++++| .++|+|||++++++..||++||+++|.+++.++.||++++++|.++
T Consensus 2 ~m~~~~i~~~l~~~l~~~l~~~~-~~i~~~~~l~~dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~ 80 (81)
T 1f80_D 2 PLGSADTLERVTKIIVDRLGVDE-ADVKLEASFKEDLGADXLDVVELVMELEDEFDMEISDEDAEKIATVGDAVNYIQNQ 80 (81)
T ss_dssp ---CCHHHHHHHHHHHHHSSCCS-SCCCTTCBHHHHSCCCHHHHHHHHHHHHHHTTCCCCHHHHHHCCBHHHHHHHCC--
T ss_pred CCCHHHHHHHHHHHHHHHHCCCH-HhCCCccchHHHcCCcHHHHHHHHHHHHHHhCCccCHHHHHHCCCHHHHHHHHHhh
Confidence 48889999999999999999987 689999999 6999999999999999999999999999999999999999998765
No 15
>1x3o_A Acyl carrier protein; structural genomics, riken structural genomics/proteomics in RSGI, NPPSFA; 1.50A {Thermus thermophilus}
Probab=99.75 E-value=4.3e-18 Score=110.92 Aligned_cols=78 Identities=37% Similarity=0.661 Sum_probs=74.1
Q ss_pred CChHHHHHHHHHHHHHHhCCCCCCCCCCCCCc-cccCCChhhHHHHHHHHHHHhCCccCccccccCCcHHHHHHHHHHHH
Q 032446 57 SAKPETVQKVCEIVRRQLALPAETELTSESKF-SALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKLV 135 (140)
Q Consensus 57 m~~~ei~~~v~~ii~e~l~i~~~~~I~~d~~l-~dLGlDSLd~vELv~~lEeefgI~i~~~~l~~~~TV~dl~~~I~~~~ 135 (140)
|+++++.++|++++++.+++++ ..++++++| .++|+|||++++++..||++||+++|.+++.++.|+++++++|.+++
T Consensus 1 M~~~~i~~~l~~~i~~~l~~~~-~~i~~~~~l~~~lG~DSl~~~~l~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~ 79 (80)
T 1x3o_A 1 MTEQEIFEKVKAVIADKLQVEP-EKVTLEARFIEDLGADSLDTVELIMGLEDEFGLEISDEEAEKIRTVKDAVEYIKAKL 79 (80)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCG-GGCCTTCBTTTTTCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCBHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhCCCH-HHCCCcCcHHhhcCccHHHHHHHHHHHHHHHCCCcCHHHHHHcCCHHHHHHHHHHHc
Confidence 7889999999999999999987 689999999 69999999999999999999999999999999999999999998875
No 16
>3ce7_A Specific mitochodrial acyl carrier protein; malaria, mitochondrial, ACP, fatty acid biosynthesis, lipid synthesis, phosphopantetheine; 1.64A {Toxoplasma}
Probab=99.74 E-value=6.6e-18 Score=118.07 Aligned_cols=81 Identities=28% Similarity=0.366 Sum_probs=75.3
Q ss_pred CChHHHHHHHHHHHHHHhCCCCCCCCCCCCCc------cccCCChhhHHHHHHHHHHHhCCccCccccccCCcHHHHHHH
Q 032446 57 SAKPETVQKVCEIVRRQLALPAETELTSESKF------SALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADL 130 (140)
Q Consensus 57 m~~~ei~~~v~~ii~e~l~i~~~~~I~~d~~l------~dLGlDSLd~vELv~~lEeefgI~i~~~~l~~~~TV~dl~~~ 130 (140)
++.+++.++|+++|++.++ ++ ..|+++++| .|||||||+++||++.||++|||+||++++.++.||+++++|
T Consensus 15 ~~~~~i~~~i~~il~e~l~-~~-~~i~~d~~l~~~~~~~dLglDSL~~veli~~lE~~fgi~i~~~~~~~~~Tv~~l~~~ 92 (107)
T 3ce7_A 15 TDINAVTNYIVGMCQKFLQ-KG-EKVTPSSKLEELRTREDRLWDCLDTVEFVLDVEEIFDVTVPDEVADNFQTLQEIADF 92 (107)
T ss_dssp TCHHHHHHHHHHHHHTTBC-TT-CCCCTTSCGGGSBBTTSSBCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCSHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhC-Cc-cccCCCCcccccCcccccCCCHHHHHHHHHHHHHHHCCCCCHHHHHhcCCHHHHHHH
Confidence 6789999999999999999 66 689999999 589999999999999999999999999999999999999999
Q ss_pred HHHHHHhhc
Q 032446 131 IEKLVEKKA 139 (140)
Q Consensus 131 I~~~~~~k~ 139 (140)
|.+++++.+
T Consensus 93 i~~~~~~~~ 101 (107)
T 3ce7_A 93 VVSERAKAG 101 (107)
T ss_dssp HHHHHHSCC
T ss_pred HHHHHHHHH
Confidence 999887543
No 17
>1dv5_A APO-DCP, APO-D-alanyl carrier protein; 3-helix bundle, transport protein; NMR {Lactobacillus casei} SCOP: a.28.1.3 PDB: 1hqb_A
Probab=99.74 E-value=3.6e-18 Score=112.92 Aligned_cols=76 Identities=17% Similarity=0.251 Sum_probs=70.1
Q ss_pred ChHHHHHHHHHHHHHHhCCCCCCCCCCCCCccccC-CChhhHHHHHHHHHHHhCCccCccccc--cCCcHHHHHHHHHHH
Q 032446 58 AKPETVQKVCEIVRRQLALPAETELTSESKFSALG-ADSLDTVEIVMSLEEEFGIGVEEENSQ--NITTVQEAADLIEKL 134 (140)
Q Consensus 58 ~~~ei~~~v~~ii~e~l~i~~~~~I~~d~~l~dLG-lDSLd~vELv~~lEeefgI~i~~~~l~--~~~TV~dl~~~I~~~ 134 (140)
+++++.++|+++|++.++.++ ..++++++|.++| +|||++++|++.||++|||+||++++. ++.||+++++||.++
T Consensus 1 ~~~~i~~~i~~il~~~~~~~~-~~i~~d~~l~~~g~lDSl~~velv~~lE~~fgi~i~~~~~~~~~~~Tv~~l~~~i~~~ 79 (80)
T 1dv5_A 1 ADEAIKNGVLDILADLTGSDD-VKKNLDLNLFETGLLDSMGTVQLLLELQSQFGVDAPVSEFDRKEWDTPNKIIAKVEQA 79 (80)
T ss_dssp CCHHHHHHHHHHHHHHHTSSS-TTTCSSCCSSTTSSCCSHHHHHHHHHHTTTSCCCCCCSSCCTTTTTSHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHhCCCc-ccCCCCcchhhccCcChHHHHHHHHHHHHHhCCcCCHHHcCHHhcCCHHHHHHHHHHc
Confidence 357899999999999999876 5899999999888 999999999999999999999999986 999999999999864
No 18
>2cnr_A FAS, ACP, acyl carrier protein; polykdetide, phosphopantetheine, lipid transport; NMR {Streptomyces coelicolor} PDB: 2koo_A* 2kop_A* 2koq_A* 2kor_A* 2kos_A*
Probab=99.73 E-value=9.2e-18 Score=109.99 Aligned_cols=79 Identities=28% Similarity=0.495 Sum_probs=74.3
Q ss_pred cCChHHHHHHHHHHHHHHhCCCCCCCCCCCCCcc-ccCCChhhHHHHHHHHHHHhCCccCccccccCCcHHHHHHHHHHH
Q 032446 56 CSAKPETVQKVCEIVRRQLALPAETELTSESKFS-ALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKL 134 (140)
Q Consensus 56 ~m~~~ei~~~v~~ii~e~l~i~~~~~I~~d~~l~-dLGlDSLd~vELv~~lEeefgI~i~~~~l~~~~TV~dl~~~I~~~ 134 (140)
.|+++++.++|++++++.+++++ +.++++++|+ ++|+|||++++|+..||++||+++|.+++.++.||++++++|.++
T Consensus 2 ~m~~~~i~~~l~~~i~~~l~~~~-~~i~~~~~l~~dlG~DSl~~~~l~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~ 80 (82)
T 2cnr_A 2 AATQEEIVAGLAEIVNEIAGIPV-EDVKLDKSFTDDLDVDSLSMVEVVVAAEERFDVKIPDDDVKNLKTVGDATKYILDH 80 (82)
T ss_dssp CCCHHHHHHHHHHHHHHHSCCCT-TTCCTTSBTTTTSCCCHHHHHHHHHHHHGGGTBCCCGGGGGTCSBHHHHHHHHHHS
T ss_pred CCCHHHHHHHHHHHHHHHhCCCH-HHCCCCcchhhccCCChHHHHHHHHHHHHHhCCCCCHHHHHHcCCHHHHHHHHHHH
Confidence 47899999999999999999987 6899999996 999999999999999999999999999999999999999999875
Q ss_pred H
Q 032446 135 V 135 (140)
Q Consensus 135 ~ 135 (140)
+
T Consensus 81 ~ 81 (82)
T 2cnr_A 81 Q 81 (82)
T ss_dssp B
T ss_pred c
Confidence 3
No 19
>2qnw_A Acyl carrier protein; malaria, SGC, structural genomics CONS fatty acid biosynthesis, lipid synthesis, phosphopantethein transit peptide; 1.90A {Toxoplasma gondii}
Probab=99.73 E-value=8.7e-18 Score=110.81 Aligned_cols=78 Identities=40% Similarity=0.624 Sum_probs=73.1
Q ss_pred CChHHHHHHHHHHHHHHhCCCCCCCCCCCCCcc-ccCCChhhHHHHHHHHHHHhCCccCccccccCCcHHHHHHHHHHHH
Q 032446 57 SAKPETVQKVCEIVRRQLALPAETELTSESKFS-ALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKLV 135 (140)
Q Consensus 57 m~~~ei~~~v~~ii~e~l~i~~~~~I~~d~~l~-dLGlDSLd~vELv~~lEeefgI~i~~~~l~~~~TV~dl~~~I~~~~ 135 (140)
.+++++.++|++++++.+++++ .+++++++|. +||+|||++++|++.||++||+++|++++.++.||++++++|.+++
T Consensus 3 ~~~~~i~~~l~~ii~~~l~~~~-~~i~~d~~l~~dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~ 81 (82)
T 2qnw_A 3 SDDRPLLERVKDVVADQLGVDR-ARINPESNFIKDLDADSLDSVELVMAFEEKFGVSIPDEEASKIATVQDALSYIEKAK 81 (82)
T ss_dssp CCSHHHHHHHHHHHHHHHCCCG-GGCCTTCBHHHHSCCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHHHHHHHCCCH-hhCCCccchhhccCCcHHHHHHHHHHHHHHHCCcCCHHHHHHcCCHHHHHHHHHHhc
Confidence 3678999999999999999987 6899999995 9999999999999999999999999999999999999999998764
No 20
>2kw2_A Specialized acyl carrier protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Rhodopseudomonas palustris} PDB: 2ll8_A* 2lpk_A 3lmo_A
Probab=99.73 E-value=9.2e-18 Score=115.74 Aligned_cols=79 Identities=33% Similarity=0.514 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCcc-ccCCChhhHHHHHHHHHHHhCCccCccc------cccCCc-----HHHHH
Q 032446 61 ETVQKVCEIVRRQLALPAETELTSESKFS-ALGADSLDTVEIVMSLEEEFGIGVEEEN------SQNITT-----VQEAA 128 (140)
Q Consensus 61 ei~~~v~~ii~e~l~i~~~~~I~~d~~l~-dLGlDSLd~vELv~~lEeefgI~i~~~~------l~~~~T-----V~dl~ 128 (140)
++.++|+++|++.+++++ .+|+++++|. |||+|||++++|++.||++|||+||+++ +.++.| |++++
T Consensus 3 ~i~~~v~~ii~~~l~~~~-~~i~~d~~l~~dLGlDSL~~veLi~~lE~~fgi~i~~~~l~~~~~~~~~~T~~~~Tv~~l~ 81 (101)
T 2kw2_A 3 STFDRVATIIAETCDIPR-ETITPESHAIDDLGIDSLDFLDIAFAIDKAFGIKLPLEKWTQEVNDGKATTEQYFVLKNLA 81 (101)
T ss_dssp CHHHHHHHHHHHHHCCCG-GGCCTTCBCCCCCCCCHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSSCHHHHHBHHHHH
T ss_pred HHHHHHHHHHHHHhCCCH-hhCCCCcchHHhcCCCHHHHHHHHHHHHHHHCCccCHHHhcchhhhhhccCCCcCcHHHHH
Confidence 688999999999999987 6899999995 9999999999999999999999999987 578888 99999
Q ss_pred HHHHHHHHhhcC
Q 032446 129 DLIEKLVEKKAA 140 (140)
Q Consensus 129 ~~I~~~~~~k~a 140 (140)
+||.+++++++|
T Consensus 82 ~~i~~~~~~~~~ 93 (101)
T 2kw2_A 82 ARIDELVAAKGA 93 (101)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHhccchh
Confidence 999999988764
No 21
>2lki_A Putative uncharacterized protein; helical bundle, acyl carrier, phosphopantetheine, fatty acid biosynthesis, lipid synthesis, PSI-biology; HET: PNS; NMR {Nitrosomonas europaea}
Probab=99.73 E-value=6.2e-18 Score=117.99 Aligned_cols=84 Identities=24% Similarity=0.341 Sum_probs=69.7
Q ss_pred ccccccCChHHHHHHHHHHHHHHhCCC--CCCCCCCCCCcc-ccCC-ChhhHHHHHHHHHHHhCCccCccc--cccCCcH
Q 032446 51 RFCVSCSAKPETVQKVCEIVRRQLALP--AETELTSESKFS-ALGA-DSLDTVEIVMSLEEEFGIGVEEEN--SQNITTV 124 (140)
Q Consensus 51 r~~~~~m~~~ei~~~v~~ii~e~l~i~--~~~~I~~d~~l~-dLGl-DSLd~vELv~~lEeefgI~i~~~~--l~~~~TV 124 (140)
|-++++..+.++.++|+++|++.++++ + .+|+++++|. |||+ |||++++|++.||++|||+||+++ ..++.||
T Consensus 14 ~~~~~~~~~m~i~~~i~~il~e~l~~~~~~-~~i~~d~~L~~dLGl~DSL~~veLi~~lE~~FgI~I~~eel~~~~~~Tv 92 (105)
T 2lki_A 14 RENLYFQGHMQHLEAVRNILGDVLNLGERK-HTLTASSVLLGNIPELDSMAVVNVITALEEYFDFSVDDDEISAQTFETL 92 (105)
T ss_dssp ---------CCTHHHHHHHHHHHTTCTTGG-GTCCTTSBCBTTBTTCCHHHHHHHHHHHHHHHTSCCCGGGCCGGGGSBH
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHhCCCccc-ccCCCCCchhhhcCcccHHHHHHHHHHHHHHhCCCcCHHHhhHHhcCCH
Confidence 334445566679999999999999988 5 5899999998 7998 999999999999999999999999 4589999
Q ss_pred HHHHHHHHHHH
Q 032446 125 QEAADLIEKLV 135 (140)
Q Consensus 125 ~dl~~~I~~~~ 135 (140)
+++++||.+++
T Consensus 93 ~~l~~~I~~~~ 103 (105)
T 2lki_A 93 GSLALFVEHKL 103 (105)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHh
Confidence 99999999875
No 22
>1klp_A ACP, ACPM, meromycolate extension acyl carrier protein; four-helix bundle, ligand transport; NMR {Mycobacterium tuberculosis} SCOP: a.28.1.1
Probab=99.72 E-value=1.4e-17 Score=117.08 Aligned_cols=82 Identities=28% Similarity=0.492 Sum_probs=77.2
Q ss_pred cCChHHHHHHHHHHHHHHhCCCCCCCCCCCCCcc-ccCCChhhHHHHHHHHHHHhCCccCccccccCCcHHHHHHHHHHH
Q 032446 56 CSAKPETVQKVCEIVRRQLALPAETELTSESKFS-ALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKL 134 (140)
Q Consensus 56 ~m~~~ei~~~v~~ii~e~l~i~~~~~I~~d~~l~-dLGlDSLd~vELv~~lEeefgI~i~~~~l~~~~TV~dl~~~I~~~ 134 (140)
.|+++++.++|++++++.+++++ .+|+++++|. +||+|||++++|+..||++|||++|++++.++.||+++++||.++
T Consensus 2 ~m~~~~i~~~l~~il~~~l~~~~-~~i~~d~~l~~dlG~DSL~~vel~~~lE~~fgi~i~~~~l~~~~Tv~~l~~~i~~~ 80 (115)
T 1klp_A 2 PVTQEEIIAGIAEIIEEVTGIEP-SEITPEKSFVDDLDIDSLSMVEIAVQTEDKYGVKIPDEDLAGLRTVGDVVAYIQKL 80 (115)
T ss_dssp CCCHHHHHHHHHHHHHHHTCCCT-TTCCTTCCTTTTTCSHHHHHHHHHHHHHHHTCCCCCHHHHTTCCSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhCcCH-HhCCCCCchhhccCCCHHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHHH
Confidence 47899999999999999999987 6899999995 999999999999999999999999999999999999999999998
Q ss_pred HHhh
Q 032446 135 VEKK 138 (140)
Q Consensus 135 ~~~k 138 (140)
+.++
T Consensus 81 ~~~~ 84 (115)
T 1klp_A 81 EEEN 84 (115)
T ss_dssp HSSC
T ss_pred Hccc
Confidence 8654
No 23
>2jq4_A AGR_C_4658P, hypothetical protein ATU2571; ATC2521, unknown function, ATC, S genomics, PSI-2, protein structure initiative; NMR {Agrobacterium tumefaciens} SCOP: a.28.1.1
Probab=99.72 E-value=1.3e-17 Score=116.12 Aligned_cols=83 Identities=18% Similarity=0.342 Sum_probs=70.7
Q ss_pred cCChHHHHHHHHHHHHHHhCCC--CCCCCCCCCCccccCCChhhHHHHHHHHHHHhCCccCccccc--cCCcHHHHHHHH
Q 032446 56 CSAKPETVQKVCEIVRRQLALP--AETELTSESKFSALGADSLDTVEIVMSLEEEFGIGVEEENSQ--NITTVQEAADLI 131 (140)
Q Consensus 56 ~m~~~ei~~~v~~ii~e~l~i~--~~~~I~~d~~l~dLGlDSLd~vELv~~lEeefgI~i~~~~l~--~~~TV~dl~~~I 131 (140)
.++++++.++|+++|++.++.+ . .+|+++++|.|||+|||++++|++.||++|||+||++++. ++.||+.++++|
T Consensus 17 ~~~~~~i~~~i~~il~~~l~~~v~~-~~i~~d~~l~dlGlDSL~~veLv~~lE~~fgI~i~~~~l~~~~~~tv~~l~~~v 95 (105)
T 2jq4_A 17 LYFQGHMNATIREILAKFGQLPTPV-DTIADEADLYAAGLSSFASVQLMLGIEEAFDIEFPDNLLNRKSFASIKAIEDTV 95 (105)
T ss_dssp ------CHHHHHHHHHHTSCCSSCG-GGCCTTSCGGGGTCCHHHHHHHHHHHHHHHSCCCCHHHHSSGGGGCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhccCCCc-ccCCCCCCHhhcCCCHHHHHHHHHHHHHHHCCCcCHHHhhhhhcCCHHHHHHHH
Confidence 4678899999999999987653 5 5899999999999999999999999999999999999886 889999999999
Q ss_pred HHHHHhhc
Q 032446 132 EKLVEKKA 139 (140)
Q Consensus 132 ~~~~~~k~ 139 (140)
..+.+.++
T Consensus 96 ~~~~~~~~ 103 (105)
T 2jq4_A 96 KLILDGKE 103 (105)
T ss_dssp HHHHHTGG
T ss_pred HHHhcccc
Confidence 99887765
No 24
>2cgq_A Acyl carrier protein ACPA; RV0033, protein transport, phosphopant; 1.83A {Mycobacterium tuberculosis}
Probab=99.71 E-value=3.9e-18 Score=120.66 Aligned_cols=82 Identities=23% Similarity=0.356 Sum_probs=68.7
Q ss_pred ccccccCChHHHHHHHHHHHHHHhCCCCCCCCCCCCCcc-ccCCChhhHHHHHHHHHHHhCCccCccccccCCcHHHHHH
Q 032446 51 RFCVSCSAKPETVQKVCEIVRRQLALPAETELTSESKFS-ALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAAD 129 (140)
Q Consensus 51 r~~~~~m~~~ei~~~v~~ii~e~l~i~~~~~I~~d~~l~-dLGlDSLd~vELv~~lEeefgI~i~~~~l~~~~TV~dl~~ 129 (140)
+|....| ++++.++|+++|++.++ |+++++|. |||+|||+++||++.||++|||+|+++++.++.||+++++
T Consensus 21 ~~~~~~M-~~ei~~~v~~il~e~l~------I~~d~~l~~dLGlDSLd~veLi~~LEe~FgI~I~~e~l~~~~TV~dlv~ 93 (113)
T 2cgq_A 21 LYFQGAM-EEAINATIQRILRTDRG------ITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIKTVGDVYT 93 (113)
T ss_dssp -----CH-HHHHHHHHHHHHTCCSC------CCTTCBTTTTTCCCHHHHHHHHHHHHHHHTCCCCHHHHHHCCBHHHHHH
T ss_pred HHhcccc-HHHHHHHHHHHHHHHhC------CCCCCchhhhcCCCHHHHHHHHHHHHHHhCCCcCHHHHHhCCCHHHHHH
Confidence 3444467 88999999999998876 78899995 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhc
Q 032446 130 LIEKLVEKKA 139 (140)
Q Consensus 130 ~I~~~~~~k~ 139 (140)
+|.+++++++
T Consensus 94 ~I~~~l~~~a 103 (113)
T 2cgq_A 94 SVAVWFPETA 103 (113)
T ss_dssp HHHTTC----
T ss_pred HHHHHHhccc
Confidence 9998877654
No 25
>2lte_A Specialized acyl carrier protein; APO protein, transferase; NMR {Pseudomonas aeruginosa}
Probab=99.55 E-value=7e-19 Score=122.31 Aligned_cols=85 Identities=22% Similarity=0.324 Sum_probs=76.4
Q ss_pred cccccc---CChHHHHHHHHHHHHHHhCCCCCCCCCCCCCccccCCChhhHHHHHHHHHHHhCCccCccccccCCcHHHH
Q 032446 51 RFCVSC---SAKPETVQKVCEIVRRQLALPAETELTSESKFSALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEA 127 (140)
Q Consensus 51 r~~~~~---m~~~ei~~~v~~ii~e~l~i~~~~~I~~d~~l~dLGlDSLd~vELv~~lEeefgI~i~~~~l~~~~TV~dl 127 (140)
|+.+++ |+++ +.++|+++|++.+++++ ++|+++++|.|||+|||+++||++.||++|||+||++++.++.||+++
T Consensus 14 ~~~~~~~~~M~~e-i~~~l~~ila~~l~i~~-~~I~~d~~l~dLGlDSL~~veL~~~lE~~fgi~i~~~~l~~~~TV~~l 91 (103)
T 2lte_A 14 RENLYFQGHMPND-MEDHLLTVLSVASGVPK-EEISRDSRMEDLAFDSLVVSELSLKLRKEFGVTGVDDELDLLETVDEL 91 (103)
Confidence 444443 4455 99999999999999987 689999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHh
Q 032446 128 ADLIEKLVEK 137 (140)
Q Consensus 128 ~~~I~~~~~~ 137 (140)
++||.+++++
T Consensus 92 ~~~I~~~~~~ 101 (103)
T 2lte_A 92 FQLVEKHRAA 101 (103)
Confidence 9999988754
No 26
>1l0i_A Acyl carrier protein; acyl chain binding, fatty acid biosynt lipid transport; HET: PSR; 1.20A {Escherichia coli} SCOP: a.28.1.1 PDB: 3ny7_B* 2fhs_C 1l0h_A* 1acp_A 1t8k_A 2fac_A* 2fad_A* 2fae_A* 2k92_A 2k93_A 2k94_A 2l0q_A
Probab=99.69 E-value=3.5e-17 Score=106.54 Aligned_cols=74 Identities=43% Similarity=0.625 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCcc-ccCCChhhHHHHHHHHHHHhCCccCccccccCCcHHHHHHHHHHHH
Q 032446 61 ETVQKVCEIVRRQLALPAETELTSESKFS-ALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKLV 135 (140)
Q Consensus 61 ei~~~v~~ii~e~l~i~~~~~I~~d~~l~-dLGlDSLd~vELv~~lEeefgI~i~~~~l~~~~TV~dl~~~I~~~~ 135 (140)
++.++|++++++.+++++ ++++++++|. ++|+|||+.++|+..||++||+++|.+++.++.||++++++|.++.
T Consensus 3 ~i~~~l~~~~~~~l~~~~-~~i~~~~~l~~dlG~DSl~~~el~~~le~~fgi~i~~~~l~~~~Tv~~l~~~i~~~~ 77 (78)
T 1l0i_A 3 TIEERVKKIIGEQLGVKQ-EEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKMTTVQAAIDYINGHQ 77 (78)
T ss_dssp CHHHHHHHHHHHHHTCCG-GGCCTTCBTTTTSCCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhCCCH-HHCCCCcchhhhcCCCHHHHHHHHHHHHHHhCCCCCHHHHHHcCCHHHHHHHHHHhc
Confidence 578999999999999987 6899999996 9999999999999999999999999999999999999999998753
No 27
>2amw_A Hypothetical protein NE2163; all helical protein, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.69 E-value=6.6e-17 Score=107.03 Aligned_cols=74 Identities=24% Similarity=0.377 Sum_probs=68.0
Q ss_pred HHHHHHHHHHHHHhCCC--CCCCCCCCCCcc-ccCC-ChhhHHHHHHHHHHHhCCccCccccc--cCCcHHHHHHHHHHH
Q 032446 61 ETVQKVCEIVRRQLALP--AETELTSESKFS-ALGA-DSLDTVEIVMSLEEEFGIGVEEENSQ--NITTVQEAADLIEKL 134 (140)
Q Consensus 61 ei~~~v~~ii~e~l~i~--~~~~I~~d~~l~-dLGl-DSLd~vELv~~lEeefgI~i~~~~l~--~~~TV~dl~~~I~~~ 134 (140)
++.++|++++++.++++ + .+++++++|. |||+ |||++++|++.||++|||++|++++. ++.||+++++||.++
T Consensus 2 ~i~~~l~~il~~~l~~~~~~-~~i~~d~~l~~dlg~~DSl~~~elv~~lE~~fgi~i~~~~l~~~~~~Tv~~l~~~i~~~ 80 (83)
T 2amw_A 2 QHLEAVRNILGDVLNLGERK-HTLTASSVLLGNIPELDSMAVVNVITALEEYFDFSVDDDEISAQTFETLGSLALFVEHK 80 (83)
T ss_dssp CTHHHHHHHHHHHTTCGGGG-GSCCTTSCSTTTSTTTTHHHHHHHHHHHHHHTTCCCCTTTCCGGGSSSHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhCCCCcc-ccCCCcchhhhccCccCHHHHHHHHHHHHHHhCCeeCHHhhhHHhcCCHHHHHHHHHHH
Confidence 36789999999999987 5 5899999999 8998 99999999999999999999999965 499999999999987
Q ss_pred H
Q 032446 135 V 135 (140)
Q Consensus 135 ~ 135 (140)
+
T Consensus 81 ~ 81 (83)
T 2amw_A 81 L 81 (83)
T ss_dssp H
T ss_pred h
Confidence 6
No 28
>1nq4_A Oxytetracycline polyketide synthase acyl carrier protein; solution structure, dynamics, ACP, biosynthetic protein; NMR {Streptomyces rimosus} SCOP: a.28.1.1
Probab=99.68 E-value=8e-17 Score=109.87 Aligned_cols=78 Identities=18% Similarity=0.305 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHhCCCCC---CCCCCCCCccccCCChhhHHHHHHHHHHHhCCccCccccccCCcHHHHHHHHHHHHHhh
Q 032446 62 TVQKVCEIVRRQLALPAE---TELTSESKFSALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKLVEKK 138 (140)
Q Consensus 62 i~~~v~~ii~e~l~i~~~---~~I~~d~~l~dLGlDSLd~vELv~~lEeefgI~i~~~~l~~~~TV~dl~~~I~~~~~~k 138 (140)
+.++|+++|++.++.+.+ +.|+++++|.+||+|||+.++|++.||++|||+||++++.++.||+++++||.+++..+
T Consensus 5 t~~~l~~ii~~~l~~~~~~~~~~i~~d~~~~dlG~DSL~~vel~~~le~~fgi~i~~~~l~~~~Tv~~l~~~i~~~~~~~ 84 (95)
T 1nq4_A 5 TLSDLLTLLRECAGEEESIDLGGDVEDVAFDALGYDSLALLNTVGRIERDYGVQLGDDAVEKATTPRALIEMTNASLTGA 84 (95)
T ss_dssp CHHHHHHHHHHHHTCSSTTCSCSCCSSSCHHHHTCCSHHHHHHHHHHHHHTCCCSCTTHHHHCCSHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHccccccccccCCCCCChhhhCCCHHHHHHHHHHHHHHHCCccCHHHHHcCCCHHHHHHHHHHHHhcc
Confidence 467788888888887641 26999999999999999999999999999999999999999999999999999988765
Q ss_pred c
Q 032446 139 A 139 (140)
Q Consensus 139 ~ 139 (140)
+
T Consensus 85 ~ 85 (95)
T 1nq4_A 85 S 85 (95)
T ss_dssp S
T ss_pred C
Confidence 4
No 29
>2ehs_A ACP, acyl carrier protein; lipid transport, structural genomics, NPPSFA, national proje protein structural and functional analyses; 1.30A {Aquifex aeolicus} PDB: 2eht_A
Probab=99.65 E-value=3e-16 Score=101.26 Aligned_cols=73 Identities=41% Similarity=0.698 Sum_probs=68.9
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCc-cccCCChhhHHHHHHHHHHHhCCccCccccccCCcHHHHHHHHHHHH
Q 032446 62 TVQKVCEIVRRQLALPAETELTSESKF-SALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKLV 135 (140)
Q Consensus 62 i~~~v~~ii~e~l~i~~~~~I~~d~~l-~dLGlDSLd~vELv~~lEeefgI~i~~~~l~~~~TV~dl~~~I~~~~ 135 (140)
+.++|++++++.+++++ ..++++++| .++|+|||++++++..+|++||+++|.+++.++.|+++++++|.+++
T Consensus 2 i~~~l~~~~~~~l~~~~-~~i~~~~~l~~~lG~DSl~~~~l~~~le~~~gi~i~~~~~~~~~tv~~l~~~i~~~~ 75 (77)
T 2ehs_A 2 LEERVKEIIAEQLGVEK-EKITPEAKFVEDLGADSLDVVELIMAFEEEFGIEIPDEDAEKIQTVGDVINYLKEKV 75 (77)
T ss_dssp HHHHHHHHHHHHHCCCG-GGCCTTCBTTTTTCCCHHHHHHHHHHHHHHHTCCCCHHHHHTCCBHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhCCCh-hhCCCccchhhccCCCHHHHHHHHHHHHHHhCCccCHHHHHHcCCHHHHHHHHHHHh
Confidence 67889999999999987 689999999 79999999999999999999999999999999999999999998875
No 30
>1or5_A Acyl carrier protein; ACP, biosynthesis, frenolicin, holo, polyketide synthase, PKS, biosynthetic protein; NMR {Streptomyces roseofulvus} SCOP: a.28.1.1
Probab=99.65 E-value=1.4e-17 Score=109.85 Aligned_cols=76 Identities=22% Similarity=0.349 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCC--CCCCccccCCChhhHHHHHHHHHHHhCCccCccccccCCcHHHHHHHHHHHH
Q 032446 60 PETVQKVCEIVRRQLALPAETELT--SESKFSALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKLV 135 (140)
Q Consensus 60 ~ei~~~v~~ii~e~l~i~~~~~I~--~d~~l~dLGlDSLd~vELv~~lEeefgI~i~~~~l~~~~TV~dl~~~I~~~~ 135 (140)
+.+.++|++++++.++++++.+++ ++++|.+||+|||++++|+..||++||+++|++++.++.||+++++||.+++
T Consensus 3 ~~~~~~l~~~l~~~l~~~~~~~i~~~~~~~~~dlG~DSL~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~ 80 (83)
T 1or5_A 3 ALTVDDLKKLLAETAGEDDSVDLAGELDTPFVDLGYDSLALLETAAVLQQRYGIALTDETVGRLGTPRELLDEVNTTP 80 (83)
T ss_dssp CSCHHHHHHHHHHHSCCCSSCCGGGCSSSCHHHHSCCHHHHHHHHHHHHTTSCCCCSHHHHHHCCCSHHHHHHHTTCC
T ss_pred hHHHHHHHHHHHHHhCCCcccccCCCCCCcHHHhCCCHHHHHHHHHHHHHHHCCccCHHHHhccCCHHHHHHHHHHHh
Confidence 457889999999999998722798 9999999999999999999999999999999999999999999999997654
No 31
>1fh1_A NODF, nodulation protein F; ROOT nodulation factor, protein backbone fold, lipid binding protein; NMR {Rhizobium leguminosarum} SCOP: i.11.1.1
Probab=99.62 E-value=2e-17 Score=111.97 Aligned_cols=80 Identities=19% Similarity=0.433 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHhCCCCC-------CCCCCCCCccccCCChhhHHHHHHHHHHHhCCccC---ccccccCCcHHHHHH
Q 032446 60 PETVQKVCEIVRRQLALPAE-------TELTSESKFSALGADSLDTVEIVMSLEEEFGIGVE---EENSQNITTVQEAAD 129 (140)
Q Consensus 60 ~ei~~~v~~ii~e~l~i~~~-------~~I~~d~~l~dLGlDSLd~vELv~~lEeefgI~i~---~~~l~~~~TV~dl~~ 129 (140)
+++.++|+++|++.++.+.+ +.++++++|.+||+|||++++|++.||++|||++| +.++.++.||+++++
T Consensus 3 ~~i~~~i~~ii~~~~~~~~~~~~~~~~~~i~~d~~l~dlg~DSl~~vel~~~lE~~fgi~i~~~~~~~~~~~~Tv~~l~~ 82 (92)
T 1fh1_A 3 DQLTLEIISAINKLVKAENGERTSVALGEITTDTELTSLGIDSLGLADVLWDLEQLYGIKIEMNTADAWSNLNNIGDVVE 82 (92)
T ss_dssp --CHHHHHHHHHHHC----------------------------CTTTTHHHHHHHC-----------------CTTTSTH
T ss_pred hHHHHHHHHHHHHHHHhccccccCCCHhhCCCCCCHhhcCCChHHHHHHHHHHHHHhCCccCCccHhHHhhcCCHHHHHH
Confidence 46788899999999885431 47999999999999999999999999999999999 678899999999999
Q ss_pred HHHHHHHhhc
Q 032446 130 LIEKLVEKKA 139 (140)
Q Consensus 130 ~I~~~~~~k~ 139 (140)
||.+++++++
T Consensus 83 ~i~~~~~~~a 92 (92)
T 1fh1_A 83 AVRGLLTKEV 92 (92)
T ss_dssp HHHC------
T ss_pred HHHHHhhccC
Confidence 9999887653
No 32
>2l3v_A ACP, acyl carrier protein; structural genomi seattle structural genomics center for infectious disease, lipid binding protein; NMR {Brucella melitensis}
Probab=99.61 E-value=4.9e-17 Score=105.91 Aligned_cols=74 Identities=42% Similarity=0.686 Sum_probs=70.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCc-cccCCChhhHHHHHHHHHHHhCCccCccccccCCcHHHHHHHHHHHH
Q 032446 61 ETVQKVCEIVRRQLALPAETELTSESKF-SALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKLV 135 (140)
Q Consensus 61 ei~~~v~~ii~e~l~i~~~~~I~~d~~l-~dLGlDSLd~vELv~~lEeefgI~i~~~~l~~~~TV~dl~~~I~~~~ 135 (140)
++.++|++++++.+++++ .+++++++| .++|+|||++++++..||++||+++|.+++.++.||++++++|.+++
T Consensus 4 ~i~~~l~~~~~~~l~~~~-~~i~~~~~l~~~lG~DSl~~~~l~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~ 78 (79)
T 2l3v_A 4 DTAERVKKIVVEHLGVDA-DKVTEGASFIDDLGADSLDTVELVMAFEEEFGVEIPDDAAETILTVGDAVKFIDKAS 78 (79)
T ss_dssp HHHHHHHHHHHHHTCCCS-TTCCTTCCHHHHTCCCSSSSSSTTTTHHHHTTCCCCHHHHTTCSSSSTTHHHHHHTC
T ss_pred HHHHHHHHHHHHHhCCCH-hhCCCCCccccccCCCHHHHHHHHHHHHHHHCCCCCHHHHHHcCCHHHHHHHHHHhc
Confidence 789999999999999987 689999999 69999999999999999999999999999999999999999998754
No 33
>2liu_A CURA; holo state, transferase; NMR {Lyngbya majuscula} PDB: 2liw_A*
Probab=99.57 E-value=1.2e-14 Score=97.85 Aligned_cols=83 Identities=18% Similarity=0.295 Sum_probs=77.3
Q ss_pred cCChHHHHHHHHHHHHHHhCCCCCCCCCCCCCccccCCChhhHHHHHHHHHHHhCCccCccccccCCcHHHHHHHHHHHH
Q 032446 56 CSAKPETVQKVCEIVRRQLALPAETELTSESKFSALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKLV 135 (140)
Q Consensus 56 ~m~~~ei~~~v~~ii~e~l~i~~~~~I~~d~~l~dLGlDSLd~vELv~~lEeefgI~i~~~~l~~~~TV~dl~~~I~~~~ 135 (140)
.++..++.+.|++++++.++++. +.++++.+|.++|+|||..+++...|+++||++++..++....|+++++++|.+++
T Consensus 16 ~~~~~~~~~~l~~~~~~~l~~~~-~~i~~~~~~~~lG~DSl~~~~l~~~l~~~~g~~l~~~~l~~~~ti~~la~~l~~~~ 94 (99)
T 2liu_A 16 QVNLSEIKQVLKQQLAEALYTEE-SEIAEDQKFVDLGLDSIVGVEWTTTINQTYNLNLKATKLYDYPTLLELSGYIAQIL 94 (99)
T ss_dssp CCCHHHHHHHHHHHHHHHTTSCG-GGCCSSSCHHHHTCCHHHHHHHHHHHHHHHTCCCCHHHHHHCCSHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHCcCH-HHcCCCCCHHHhCccHHHHHHHHHHHHHHHCCCcCHHHHHhCCCHHHHHHHHHHHh
Confidence 45788999999999999999987 68999999999999999999999999999999999999999999999999999988
Q ss_pred Hhhc
Q 032446 136 EKKA 139 (140)
Q Consensus 136 ~~k~ 139 (140)
..++
T Consensus 95 ~~~~ 98 (99)
T 2liu_A 95 SSQG 98 (99)
T ss_dssp HHHT
T ss_pred hccC
Confidence 7654
No 34
>2afd_A Protein ASL1650; twisted antiparallel helical bundle, acyl carrier protein FA structural genomics, PSI, protein structure initiative; NMR {Nostoc SP} PDB: 2afe_A
Probab=99.57 E-value=1.4e-14 Score=95.42 Aligned_cols=79 Identities=15% Similarity=0.175 Sum_probs=73.9
Q ss_pred cCChHHHHHHHHHHHHHHhCCCCCCCCCCCCCccccCCChhhHHHHHHHHHHHhCCccCccccccCCcHHHHHHHHHHHH
Q 032446 56 CSAKPETVQKVCEIVRRQLALPAETELTSESKFSALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKLV 135 (140)
Q Consensus 56 ~m~~~ei~~~v~~ii~e~l~i~~~~~I~~d~~l~dLGlDSLd~vELv~~lEeefgI~i~~~~l~~~~TV~dl~~~I~~~~ 135 (140)
.++..++.+.|++++++.+++++ ..++++.+|.++|+|||..+++...|+++||++++..++.+..|+++++++|.+++
T Consensus 9 ~~~~~~~~~~l~~~~~~~l~~~~-~~i~~~~~~~~lG~DSl~~~~l~~~l~~~~~~~i~~~~~~~~~ti~~la~~l~~~~ 87 (88)
T 2afd_A 9 PASVEDIQSWLIDQFAQQLDVDP-DDIDMEESFDNYDLNSSKALILLGRLEKWLGKELNPVLIFNYPTIAQLAKRLGELY 87 (88)
T ss_dssp CSSHHHHHHHHHHHHHHHHTSCG-GGCCTTSCGGGTTCCSTHHHHHHHHHHHHTTSCCCGGGTTTCCSHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHHCcCH-HHcCCCCCHHHcCccHHHHHHHHHHHHHHHCCCcCHHHHHhCCCHHHHHHHHHHHh
Confidence 46778999999999999999986 58999999999999999999999999999999999999999999999999998764
No 35
>2kr5_A PKS, aflatoxin biosynthesis polyketide synthase; acyl carrrier protein, holo, phosphopantetheine, transport protein; HET: PNS; NMR {Aspergillus parasiticus}
Probab=99.53 E-value=2.4e-14 Score=95.00 Aligned_cols=76 Identities=25% Similarity=0.394 Sum_probs=71.2
Q ss_pred CChHHHHHHHHHHHHHHhCCCCCCCCCCCCCccccCCChhhHHHHHHHHHHHhCCccCc--cccccCCcHHHHHHHHHH
Q 032446 57 SAKPETVQKVCEIVRRQLALPAETELTSESKFSALGADSLDTVEIVMSLEEEFGIGVEE--ENSQNITTVQEAADLIEK 133 (140)
Q Consensus 57 m~~~ei~~~v~~ii~e~l~i~~~~~I~~d~~l~dLGlDSLd~vELv~~lEeefgI~i~~--~~l~~~~TV~dl~~~I~~ 133 (140)
....++.+.|++++++.+++++ .+++++.+|.+||+|||..++++..|+++||++++. .++....|+++++++|.+
T Consensus 7 ~~~~~~~~~l~~~~~~~l~~~~-~~i~~~~~~~~lG~DSL~~~~l~~~l~~~~g~~l~~~~~~l~~~~Tv~~la~~l~~ 84 (89)
T 2kr5_A 7 GVSNEKLDAVMRVVSEESGIAL-EELTDDSNFADMGIDSLSSMVIGSRFREDLGLDLGPEFSLFIDCTTVRALKDFMLG 84 (89)
T ss_dssp CCCHHHHHHHHHHHHHHHCCCG-GGCCTTCBHHHHTCCHHHHHHHHHHHHHTTCCCCCSSCCTTTSCCBHHHHHHHHHT
T ss_pred CccHHHHHHHHHHHHHHHCcCH-HHCCCCCCHHHcCccHHHHHHHHHHHHHHHCCCCCchHHHHHcCCCHHHHHHHHHH
Confidence 3567899999999999999987 689999999999999999999999999999999999 899999999999999975
No 36
>2cg5_B Fatty acid synthase; transferase-hydrolase complex, transferase/hydrolase (comple fatty acid biosynthesis, phosphopantetheine transferase; HET: COA; 2.7A {Homo sapiens} PDB: 2png_A
Probab=99.48 E-value=1e-13 Score=94.50 Aligned_cols=70 Identities=23% Similarity=0.372 Sum_probs=62.9
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCccccCCChhhHHHHHHHHHHHhCCccCccccccCCcHHHHHHHHHHH
Q 032446 64 QKVCEIVRRQLALPAETELTSESKFSALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKL 134 (140)
Q Consensus 64 ~~v~~ii~e~l~i~~~~~I~~d~~l~dLGlDSLd~vELv~~lEeefgI~i~~~~l~~~~TV~dl~~~I~~~ 134 (140)
+.|++.|++++++++.+.|+++.+|.|||+|||+.|||...||++||+++|..++..+ |+++|++++...
T Consensus 9 ~~v~~~va~iLg~~~~~~I~~~~~l~dLG~DSL~aVELr~~Le~~fgi~lp~~~l~~~-Ti~~La~~v~~~ 78 (91)
T 2cg5_B 9 RDLVEAVAHILGIRDLAAVNLDSSLADLGLDALMSVEVRQTLERELNLVLSVREVRQL-TLRKLQELSSKA 78 (91)
T ss_dssp TTHHHHHHHHTTCCSCTTSCTTSBTTTTTCCHHHHHHHHHHHHHHHCCCCCHHHHHTC-BHHHHHHHHHCC
T ss_pred HHHHHHHHHHHCCCchhhCCCCCCHHHhCCcchHHHHHHHHHHHHHCCCCCHHHHHhC-CHHHHHHHHhcc
Confidence 4688899999999643589999999999999999999999999999999999998775 999999998754
No 37
>2ju1_A Erythronolide synthase; carrier protein domain, modular polyketide synthase, alpha- helical bundle, acyltransferase; NMR {Saccharopolyspora erythraea} PDB: 2ju2_A
Probab=99.46 E-value=7.6e-14 Score=93.57 Aligned_cols=76 Identities=18% Similarity=0.215 Sum_probs=69.7
Q ss_pred hHHHHHHHHHHHHHHhC-CCCCCCCCCCCCccccCCChhhHHHHHHHHHHHhCCccCccccccCCcHHHHHHHHHHHH
Q 032446 59 KPETVQKVCEIVRRQLA-LPAETELTSESKFSALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKLV 135 (140)
Q Consensus 59 ~~ei~~~v~~ii~e~l~-i~~~~~I~~d~~l~dLGlDSLd~vELv~~lEeefgI~i~~~~l~~~~TV~dl~~~I~~~~ 135 (140)
+..+.+.|++++++.++ .++ +.|+++.+|+++|+|||..+++...++++||++++..++.+.+|+++++++|.+++
T Consensus 18 ~~~~~~~l~~~~~~~l~~~~~-~~i~~~~~f~~lG~DSL~a~~l~~~l~~~~g~~l~~~~l~~~~ti~~la~~l~~~l 94 (95)
T 2ju1_A 18 TAELVRLVRTSTATVLGHDDP-KAVRATTPFKELGFDSLAAVRLRNLLNAATGLRLPSTLVFDHPNASAVAGFLDAEL 94 (95)
T ss_dssp HHHHHHHHHHHHHHHTTCCCG-GGCCSSSCHHHHTCSSHHHHHHHHHHGGGTSSCCCTTHHHHCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCh-hhCCCCCCHHHcCCcHHHHHHHHHHHHHHHCCCCChhHHhcCCCHHHHHHHHHHHc
Confidence 35678889999999999 555 68999999999999999999999999999999999999999999999999998765
No 38
>2l22_A Mupirocin didomain acyl carrier protein; biosynthetic protein; NMR {Pseudomonas fluorescens}
Probab=99.43 E-value=1.6e-13 Score=104.65 Aligned_cols=81 Identities=12% Similarity=0.202 Sum_probs=74.5
Q ss_pred ccCChHHHHHHHHHHHHHHhCCCCCCCCCCCCCccccCCChhhHHHHHHHHHHHhCCccCccccccCCcHHHHHHHHHHH
Q 032446 55 SCSAKPETVQKVCEIVRRQLALPAETELTSESKFSALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKL 134 (140)
Q Consensus 55 ~~m~~~ei~~~v~~ii~e~l~i~~~~~I~~d~~l~dLGlDSLd~vELv~~lEeefgI~i~~~~l~~~~TV~dl~~~I~~~ 134 (140)
..++++++.+.|++++++.+++++ ++|+++.+|.+||+|||+.++|+..|+++||++++...+.+..|+++++++|.+.
T Consensus 20 ~~~~~~~i~~~l~~~~a~~l~~~~-~~i~~~~~f~~lG~DSl~~~el~~~l~~~~g~~l~~~~~~~~~Ti~~la~~l~~~ 98 (212)
T 2l22_A 20 HMVADDECAQFLRQSLAAMLYCEP-GQIRDGSRFLELGLDSVIAAQWIREINKHYQLKIPADGIYTYPVFKAFTQWVGTQ 98 (212)
T ss_dssp --CCTTHHHHHHHHHHHHHTTCCT-TSCCTTCBHHHHTCCHHHHHHHHHHHHHHTTCCCCTTHHHHCCBHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHHHHHCcCH-HHcCCCCCHHHhCCcHHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHHh
Confidence 347788999999999999999987 6899999999999999999999999999999999999999999999999999876
Q ss_pred HH
Q 032446 135 VE 136 (140)
Q Consensus 135 ~~ 136 (140)
..
T Consensus 99 ~~ 100 (212)
T 2l22_A 99 LQ 100 (212)
T ss_dssp SC
T ss_pred cc
Confidence 53
No 39
>4i4d_A Peptide synthetase NRPS type II-PCP; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MLY; 2.10A {Streptomyces verticillus}
Probab=99.42 E-value=3.8e-13 Score=90.69 Aligned_cols=78 Identities=17% Similarity=0.231 Sum_probs=70.4
Q ss_pred ChHHHHHHHHHHHHHHhCCCCCCCCCCCCCccccCCChhhHHHHHHHHHHHhCCccCccccccCCcHHHHHHHHHHHHHh
Q 032446 58 AKPETVQKVCEIVRRQLALPAETELTSESKFSALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKLVEK 137 (140)
Q Consensus 58 ~~~ei~~~v~~ii~e~l~i~~~~~I~~d~~l~dLGlDSLd~vELv~~lEeefgI~i~~~~l~~~~TV~dl~~~I~~~~~~ 137 (140)
...++.+.|++++++.|+++ .|+++.+|+++|.|||..++|+..|+++||++++..++...+|+++++++|.+....
T Consensus 13 ~~~~~e~~l~~i~~~vL~~~---~i~~~~~Ff~lGgdSL~a~~l~~~l~~~~g~~l~~~~l~~~pTi~~la~~l~~~~~~ 89 (93)
T 4i4d_A 13 RRRALERDIAAIWAETLGRD---SVGPHEDFAALGGNSIHAIXITNRVEELVDAELSIRVLLETRTVAGMTDHVHATLTG 89 (93)
T ss_dssp HHHHHHHHHHHHHHHHHTCS---CCCTTCCTTTTTCCHHHHHHHHHHHHHHHTSCCCHHHHHHHCSHHHHHHHHHHHTC-
T ss_pred CCCHHHHHHHHHHHHHhCCC---CCCCCCCHHHcCCcHHHHHHHHHHHHHHhCCCCCHHHHHcCCCHHHHHHHHHHHccc
Confidence 35678899999999999984 599999999999999999999999999999999999999999999999999987654
Q ss_pred h
Q 032446 138 K 138 (140)
Q Consensus 138 k 138 (140)
.
T Consensus 90 ~ 90 (93)
T 4i4d_A 90 E 90 (93)
T ss_dssp -
T ss_pred c
Confidence 3
No 40
>1dny_A Non-ribosomal peptide synthetase peptidyl carrier protein; four-helix bundle, modular enzyme, domain, flexible region; NMR {Brevibacillus brevis} SCOP: a.28.1.2 PDB: 2gdw_A 2gdx_A 2gdy_A 2k2q_A
Probab=99.38 E-value=1e-12 Score=88.55 Aligned_cols=75 Identities=16% Similarity=0.254 Sum_probs=69.0
Q ss_pred CChHHHHHHHHHHHHHHhCCCCCCCCCCCCCccccCCChhhHHHHHHHHHHHhCCccCccccccCCcHHHHHHHHHHH
Q 032446 57 SAKPETVQKVCEIVRRQLALPAETELTSESKFSALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKL 134 (140)
Q Consensus 57 m~~~ei~~~v~~ii~e~l~i~~~~~I~~d~~l~dLGlDSLd~vELv~~lEeefgI~i~~~~l~~~~TV~dl~~~I~~~ 134 (140)
....++.++|++++++.++++ .++++.+|+++|.|||..++++..|+++||++++..++...+|+++++++|.+.
T Consensus 10 ~p~~~~e~~l~~i~~~vL~~~---~i~~~~~Ff~lGgdSL~a~~l~~~l~~~~g~~l~~~~l~~~~Ti~~la~~i~~~ 84 (91)
T 1dny_A 10 APTNAVESKLAEIWERVLGVS---GIGILDNFFQIGGHSLKAMAVAAQVHREYQVELPLKVLFAQPTIKALAQYVATR 84 (91)
T ss_dssp CCSSHHHHHHHHHHHHHHTCS---SCCSSCCTTSSCCSSHHHHHHHHHHHHHCCCCCCHHHHHHSCSHHHHHHHHHC-
T ss_pred CCCCHHHHHHHHHHHHHhCCC---CCCCCCCHHHcCCCHHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHHh
Confidence 456789999999999999984 589999999999999999999999999999999999999999999999999754
No 41
>2l22_A Mupirocin didomain acyl carrier protein; biosynthetic protein; NMR {Pseudomonas fluorescens}
Probab=99.35 E-value=3.9e-12 Score=96.97 Aligned_cols=79 Identities=19% Similarity=0.274 Sum_probs=72.9
Q ss_pred ChHHHHHHHHHHHHHHhCCCCCCCCCCCCCccccCCChhhHHHHHHHHHHHhCCccCccccccCCcHHHHHHHHHHHHHh
Q 032446 58 AKPETVQKVCEIVRRQLALPAETELTSESKFSALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKLVEK 137 (140)
Q Consensus 58 ~~~ei~~~v~~ii~e~l~i~~~~~I~~d~~l~dLGlDSLd~vELv~~lEeefgI~i~~~~l~~~~TV~dl~~~I~~~~~~ 137 (140)
.+.++.+.|++++++.+++++ +.|+++.+|+++|+|||+.++|+..|+++||++++..++.+..||++++++|.+.+..
T Consensus 127 ~~~~i~~~l~~~~~~~l~~~~-~~i~~~~~f~~lG~DSl~a~el~~~l~~~~g~~l~~~~l~~~~Ti~~La~~l~~~~~~ 205 (212)
T 2l22_A 127 QRESIQDYLKQSLGELLFLDP-GQLRSGAQFLDLGMDSVTGTQWMRGVSRHFSIQLAADAIYTWPTLKSLADEVDRRVQL 205 (212)
T ss_dssp HHHHHHHHHHHHHHHHHSSCS-SSCCSSCCGGGGCSSSHHHHHHHHHHHHHTTCCCCGGGGGGCCSHHHHHHHHHHHHC-
T ss_pred CHHHHHHHHHHHHHHHHCCCh-hhCCCCCCHHHhCCCHHHHHHHHHHHHHHHCCCcCHHHHHcCCCHHHHHHHHHHHhcc
Confidence 457888999999999999987 5899999999999999999999999999999999999999999999999999887643
No 42
>2cq8_A 10-formyltetrahydrofolate dehydrogenase; 10-FTHFDH, PP-binding, acyl carrier protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.10 E-value=1.7e-10 Score=81.11 Aligned_cols=76 Identities=24% Similarity=0.315 Sum_probs=69.7
Q ss_pred ChHHHHHHHHHHHHHHhC-CCCCCCCCCCCCccccCCChhhHHHHHHHHHHHhC-CccCccccccCCcHHHHHHHHHHHH
Q 032446 58 AKPETVQKVCEIVRRQLA-LPAETELTSESKFSALGADSLDTVEIVMSLEEEFG-IGVEEENSQNITTVQEAADLIEKLV 135 (140)
Q Consensus 58 ~~~ei~~~v~~ii~e~l~-i~~~~~I~~d~~l~dLGlDSLd~vELv~~lEeefg-I~i~~~~l~~~~TV~dl~~~I~~~~ 135 (140)
.+.++..+|.+++.++|+ .+ .|.++.+|++||-|||..+.|+..|+++|| ++++..++...+|+++++++|.+.+
T Consensus 22 ~~~~~E~~La~iW~~vL~~~~---~i~~~ddFF~lGG~SLla~rLv~~ir~~~g~v~l~l~~Lf~~pTl~~lA~~l~~~~ 98 (110)
T 2cq8_A 22 AELVTAEAVRSVWQRILPKVL---EVEDSTDFFKSGAASVDVVRLVEEVKELCDGLELENEDVYMASTFGDFIQLLVRKL 98 (110)
T ss_dssp THHHHHHHHHHHHHHHCSSCS---CCCTTCBHHHHHCCTTHHHHHHHHHHHHHTSCCCCHHHHHHCCBHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHhCCCC---CCCCCCCHHhcCChHHHHHHHHHHHHHHcCCCCcCHHHHHhCCCHHHHHHHHHHHh
Confidence 456799999999999998 53 599999999999999999999999999999 9999999999999999999998766
Q ss_pred H
Q 032446 136 E 136 (140)
Q Consensus 136 ~ 136 (140)
.
T Consensus 99 ~ 99 (110)
T 2cq8_A 99 R 99 (110)
T ss_dssp H
T ss_pred c
Confidence 4
No 43
>3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A
Probab=98.93 E-value=1.8e-09 Score=86.08 Aligned_cols=75 Identities=17% Similarity=0.216 Sum_probs=68.4
Q ss_pred CChHHHHHHHHHHHHHHhCCCCCCCCCCCCCccccCCChhhHHHHHHHHHHHhCCccCccccccCCcHHHHHHHHHHH
Q 032446 57 SAKPETVQKVCEIVRRQLALPAETELTSESKFSALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKL 134 (140)
Q Consensus 57 m~~~ei~~~v~~ii~e~l~i~~~~~I~~d~~l~dLGlDSLd~vELv~~lEeefgI~i~~~~l~~~~TV~dl~~~I~~~ 134 (140)
..+.++++.|++++++.|+++ .|..+.+|+++|.|||..++|+..|+++||++++..++....|+++++++|.+.
T Consensus 7 ~p~~~~e~~l~~~~~~~l~~~---~i~~~~~ff~lGgdSl~a~~l~~~l~~~~~~~~~~~~~~~~~t~~~la~~~~~~ 81 (329)
T 3tej_A 7 APKAGSETIIAAAFSSLLGCD---VQDADADFFALGGHXLLAMKLAAQLSRQVARQVTPGQVMVASTVAKLATIIDAE 81 (329)
T ss_dssp CCCTTHHHHHHHHHHHHHTC----CCSTTCBTTTTTCCHHHHHHHHHHHHHHHTSCCCHHHHHHCCBHHHHHHHHHSC
T ss_pred CCCCHHHHHHHHHHHHHhCCC---CCCCCCCHHHcCCcHHHHHHHHHHHHHHHCCCCCHHHHHhCCCHHHHHHHHHhh
Confidence 456688999999999999986 388999999999999999999999999999999999999999999999999754
No 44
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=98.68 E-value=4.5e-08 Score=81.82 Aligned_cols=75 Identities=21% Similarity=0.360 Sum_probs=69.3
Q ss_pred CChHHHHHHHHHHHHHHhCCCCCCCCCCCCCccccCCChhhHHHHHHHHHHHhCCccCccccccCCcHHHHHHHHHHH
Q 032446 57 SAKPETVQKVCEIVRRQLALPAETELTSESKFSALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKL 134 (140)
Q Consensus 57 m~~~ei~~~v~~ii~e~l~i~~~~~I~~d~~l~dLGlDSLd~vELv~~lEeefgI~i~~~~l~~~~TV~dl~~~I~~~ 134 (140)
.+..+++.+|++++++.|+++ .|..+.+|++||.|||..++++..++++||++++..++....|+.++++++...
T Consensus 6 ~p~~~~e~~l~~iw~~vL~~~---~i~~~d~ff~lGgdSl~a~~l~~~~~~~~g~~l~~~~i~~~~ti~~la~~~~~~ 80 (520)
T 2jgp_A 6 APRSVWEARLAQVWEQVLNVP---QVGALDDFFALGGHSLRAMRVLSSMHNEYQVDIPLRILFEKPTIQELAAFIEET 80 (520)
T ss_dssp CCCSHHHHHHHHHHHHHHTCS---CCCTTCBTTTTTCCHHHHHHHHHHHHHHHCBCCCHHHHHHSCBHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHHHhCCC---CCCCCccHHHhcccHHHHHHHHHHHHHHhCCCcCHHHHhcCCCHHHHHHHHHhh
Confidence 456789999999999999985 588999999999999999999999999999999999999999999999998753
No 45
>2fq1_A Isochorismatase; ENTB, NRPS, multi-domain, ACP, hydrolase; 2.30A {Escherichia coli}
Probab=98.46 E-value=1.7e-07 Score=74.52 Aligned_cols=66 Identities=12% Similarity=0.096 Sum_probs=61.1
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCccccCCChhhHHHHHHHHHHHhCCccCccccccCCcHHHHHHHHH
Q 032446 64 QKVCEIVRRQLALPAETELTSESKFSALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIE 132 (140)
Q Consensus 64 ~~v~~ii~e~l~i~~~~~I~~d~~l~dLGlDSLd~vELv~~lEeefgI~i~~~~l~~~~TV~dl~~~I~ 132 (140)
+.+++.+++.+ +++ +.|+++.+|.++|+||+..++|+..+++. |++++..++.+.+|++++++++.
T Consensus 218 dwlr~~va~~L-~~~-~~i~~~~nL~~lGlDSi~~m~l~~~~~~~-g~~~~~~~l~~~ptl~~~~~~l~ 283 (287)
T 2fq1_A 218 AALREVILPLL-DES-DEPFDDDNLIDYGLDSVRMMALAARWRKV-HGDIDFVMLAKNPTIDAWWKLLS 283 (287)
T ss_dssp HHHHHHHGGGC-CCS-SCCCTTSCSGGGTCCTTHHHHHHHHHTTT-CTTCCHHHHHTSCSHHHHHHHHH
T ss_pred HHHHHHHHHHh-CCH-hhcCCCCCHHHhCccHHHHHHHHHHHHHc-CCCCCHHHHHhCccHHHHHHHHH
Confidence 45788888888 776 58999999999999999999999999998 99999999999999999999997
No 46
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=98.43 E-value=4.3e-07 Score=84.45 Aligned_cols=75 Identities=16% Similarity=0.262 Sum_probs=69.3
Q ss_pred CChHHHHHHHHHHHHHHhCCCCCCCCCCCCCccccCCChhhHHHHHHHHHHHhCCccCccccccCCcHHHHHHHHHHH
Q 032446 57 SAKPETVQKVCEIVRRQLALPAETELTSESKFSALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKL 134 (140)
Q Consensus 57 m~~~ei~~~v~~ii~e~l~i~~~~~I~~d~~l~dLGlDSLd~vELv~~lEeefgI~i~~~~l~~~~TV~dl~~~I~~~ 134 (140)
..+.++++.|.+++++.|+++ .|..+.+|++||.|||..++|+..|+++||++++..++....|+.+++++|...
T Consensus 968 ~p~~~~e~~l~~~~~~vL~~~---~i~~~~~ff~lGg~Sl~a~~l~~~l~~~~g~~l~~~~~~~~~ti~~la~~~~~~ 1042 (1304)
T 2vsq_A 968 GPRNEMEETIAQIWSEVLGRK---QIGIHDDFFALGGHALKAMTAASRIKKELGIDLPVKLLFEAPTIAGISAYLKNG 1042 (1304)
T ss_dssp CCSSHHHHHHHHHHHHHHTCS---CCCTTCCTTTTTCCHHHHHHHHHHSSSTTSCCCCSSCTTTCCSHHHHHHHHHHT
T ss_pred CCCChHHHHHHHHHHHHcCCC---ccCCCCCHHHhCCChHHHHHHHHHHHHHhCCCCCHHHHHhCCCHHHHHHHHHhc
Confidence 456789999999999999984 588999999999999999999999999999999999999999999999999753
No 47
>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}
Probab=98.29 E-value=8.7e-08 Score=80.68 Aligned_cols=75 Identities=19% Similarity=0.305 Sum_probs=0.0
Q ss_pred CChHHHHHHHHHHHHHHhCCCCCCCCCCCCCccccCCChhhHHHHHHHHHHHhCCccCccccccCCcHHHHHHHHHHHH
Q 032446 57 SAKPETVQKVCEIVRRQLALPAETELTSESKFSALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKLV 135 (140)
Q Consensus 57 m~~~ei~~~v~~ii~e~l~i~~~~~I~~d~~l~dLGlDSLd~vELv~~lEeefgI~i~~~~l~~~~TV~dl~~~I~~~~ 135 (140)
.+..+++..|.+++++.|+++ .|..+.+|++||.|||..+.|+..|++ ||++++..++....|+.+++++|.+..
T Consensus 41 ~p~~~~e~~l~~~w~~~l~~~---~i~~~~~ff~lGg~Sl~a~~l~~~~~~-~~~~~~~~~~~~~~t~~~la~~~~~~~ 115 (508)
T 4f6l_B 41 EPSNEIEQTFVDVFGEVLKQN---DVGVDDDFFELGGNSLEAMLVVSHLKR-FGHHISMQTLYQYKTVRQIVNYMYQNQ 115 (508)
T ss_dssp -------------------------------------------------------------------------------
T ss_pred CCCCHHHHHHHHHHHHHhCCC---CCCCCCChHHcCchHHHHHHHHHHHHH-cCCCccHHHHhcCCcHHHHHHHHHhhc
Confidence 456788999999999999985 588999999999999999999999986 999999999999999999999997654
No 48
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=98.17 E-value=2.4e-07 Score=80.25 Aligned_cols=74 Identities=14% Similarity=0.145 Sum_probs=0.0
Q ss_pred ChHHHHHHHHHHHHHHhCCCCCCCCCCCCCccccCCChhhHHHHHHHHHH-HhCCccCccccccCCcHHHHHHHHHHH
Q 032446 58 AKPETVQKVCEIVRRQLALPAETELTSESKFSALGADSLDTVEIVMSLEE-EFGIGVEEENSQNITTVQEAADLIEKL 134 (140)
Q Consensus 58 ~~~ei~~~v~~ii~e~l~i~~~~~I~~d~~l~dLGlDSLd~vELv~~lEe-efgI~i~~~~l~~~~TV~dl~~~I~~~ 134 (140)
...+++..+.+++++.|+++ .+..+.+|++||.|||..+.|+..|++ .||++++..++....|+.+++++|.+.
T Consensus 521 ~~~~~e~~l~~iw~~vL~~~---~~~~~d~Ff~lGGdSl~a~~l~~~l~~~~~~~~l~~~~~f~~pti~~la~~l~~~ 595 (620)
T 4dg8_A 521 ALDPDQRGCAQLWSELLGCE---VGAADQDFFLCGGNSLLALQLVALCQSAGAGANLGLADLQANSRLDQFSRLLRSH 595 (620)
T ss_dssp ------------------------------------------------------------------------------
T ss_pred CCCHHHHHHHHHHHHHhCCC---CCCCCCChhhccCcHHHHHHHHHHHHhhCCCCCcCHHHHhcCCCHHHHHHHHHhc
Confidence 34567778999999999985 478899999999999999999999999 899999999999999999999999764
No 49
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=98.06 E-value=2.8e-06 Score=72.96 Aligned_cols=72 Identities=13% Similarity=0.115 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCccccCCChhhHHHHHHHHHHHhCCccCccccccCCcHHHHHHHHHHHH
Q 032446 61 ETVQKVCEIVRRQLALPAETELTSESKFSALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKLV 135 (140)
Q Consensus 61 ei~~~v~~ii~e~l~i~~~~~I~~d~~l~dLGlDSLd~vELv~~lEeefgI~i~~~~l~~~~TV~dl~~~I~~~~ 135 (140)
...+.+.+++.+.++.. ..+..+.+|++||.|||..++|+..|++ ++++++..++.+.+|+.+++++|.+.+
T Consensus 545 ~~~~~l~~~~~~~l~~~--~~~~~~d~Ff~lGgdSl~a~~l~~~l~~-~~~~~~~~~~~~~pti~~la~~l~~~~ 616 (617)
T 3rg2_A 545 ASKAALREVILPLLDES--DEPFDDDNLIDYGLDSVRMMALAARWRK-VHGDIDFVMLAKNPTIDAWWKLLSREV 616 (617)
T ss_dssp CSHHHHHHHHGGGSCTT--CCCCTTSCGGGGTCCHHHHHHHHHHHHT-TSTTCCHHHHHHSCCHHHHHHHHCC--
T ss_pred ccHHHHHHHHHHHhccC--CCCCCCCChhhcCccHHHHHHHHHHHHH-hcCCCCHHHHhcCCCHHHHHHHHHhhc
Confidence 34567888888888743 3688899999999999999999999987 789999999999999999999987543
No 50
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.55 E-value=1.1e-05 Score=79.79 Aligned_cols=71 Identities=21% Similarity=0.302 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCccccCCChhhHHHHHHHHHHHhCCccCccccccCCcHHHHHHHHHHH
Q 032446 63 VQKVCEIVRRQLALPAETELTSESKFSALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKL 134 (140)
Q Consensus 63 ~~~v~~ii~e~l~i~~~~~I~~d~~l~dLGlDSLd~vELv~~lEeefgI~i~~~~l~~~~TV~dl~~~I~~~ 134 (140)
.+.|.+++++.|+++..+.|+++.+|++||+|||..+||...|+++||++++..++.. .|+..+++++...
T Consensus 2125 ~~~l~~~~a~vL~~~~~~~i~~~~~~~~lG~DSL~avelr~~i~~~~~~~l~~~~i~~-~t~~~la~~~~~~ 2195 (2512)
T 2vz8_A 2125 QKDLVKAVAHILGIRDVASINPDSTLVDLGLDSLMGVEVRQILEREHDLVLSMREVRQ-LSLRKLQELSSKT 2195 (2512)
T ss_dssp ------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhCCCcccccCCCCchHHhCcchHHHHHHHHHHHHHhCCcccHHHHHh-hhHHHHHHHHhhc
Confidence 4568899999999874357999999999999999999999999999999999988866 6888888877644
No 51
>2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens}
Probab=90.94 E-value=0.044 Score=42.48 Aligned_cols=37 Identities=5% Similarity=-0.170 Sum_probs=8.4
Q ss_pred CCChhhHHHHHHHHHHHhCCccCccccccCCcHHHHH
Q 032446 92 GADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAA 128 (140)
Q Consensus 92 GlDSLd~vELv~~lEeefgI~i~~~~l~~~~TV~dl~ 128 (140)
|.|||..++++..|+++||++++..++.+..|+..++
T Consensus 1 GGdSL~a~~l~~rl~~~~g~~l~~~~lf~~pt~~~l~ 37 (316)
T 2px6_A 1 GSHNLACPTPKEDGLAQQQTQLNLRSLLVNPEGPTLM 37 (316)
T ss_dssp -------------------------CCCCCTTSCSEE
T ss_pred CCchHHHHHHHHHHHHHHhhccchhhhhcCCCcCeeE
Confidence 7899999999999999999999999988777776543
No 52
>1dd4_C 50S ribosomal protein L7/L12; dimer formation, flexibility, hinge region, four-helix- bundle, five-helix- bundle, alpha-beta structure; HET: TBR; 2.40A {Thermotoga maritima} SCOP: a.108.1.1
Probab=83.89 E-value=0.81 Score=25.96 Aligned_cols=20 Identities=30% Similarity=0.547 Sum_probs=17.0
Q ss_pred CChhhHHHHHHHHHHHhCCc
Q 032446 93 ADSLDTVEIVMSLEEEFGIG 112 (140)
Q Consensus 93 lDSLd~vELv~~lEeefgI~ 112 (140)
+.=+...||+-.+|++|||+
T Consensus 13 lTvlE~~eLvk~leekfGVs 32 (40)
T 1dd4_C 13 LTVSELAELVKKLEDKFGVT 32 (40)
T ss_dssp SCHHHHHHHHHHHHHHTCCC
T ss_pred CcHHHHHHHHHHHHHHHCCC
Confidence 34577889999999999997
No 53
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=77.22 E-value=0.48 Score=48.40 Aligned_cols=53 Identities=8% Similarity=0.237 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCcccc-CCChhhHHHHHHHHHHHhCCccCc
Q 032446 62 TVQKVCEIVRRQLALPAETELTSESKFSAL-GADSLDTVEIVMSLEEEFGIGVEE 115 (140)
Q Consensus 62 i~~~v~~ii~e~l~i~~~~~I~~d~~l~dL-GlDSLd~vELv~~lEeefgI~i~~ 115 (140)
..+.++.+++..++... ++|.++.++.+| |.+|...-||+..|+.|||..+|+
T Consensus 1795 a~~~~~~liA~~~k~~~-~~i~~~~~i~~L~gg~St~~nell~dl~~efg~~~p~ 1848 (3089)
T 3zen_D 1795 AADATVALIALSAKMRI-DQIEALDSIESITDGASSRRNQLLVDLGSELNLGAID 1848 (3089)
T ss_dssp -------------------------------------------------------
T ss_pred HHHHHHHHHHHHhCCCh-hHCCccccHHHHhCCchHHHHHHHHHHHHHhCCCCCC
Confidence 45668889999999888 699999999988 999999999999999999997664
No 54
>1zav_U 50S ribosomal protein L7/L12; ribosome structure and function, L10-L12 complex structure, L10E structure, L7/12 ribosomal stalk; 1.90A {Thermotoga maritima} SCOP: a.108.1.1 PDB: 1zaw_U 1zax_U 1dd3_C
Probab=74.06 E-value=2.4 Score=22.44 Aligned_cols=16 Identities=38% Similarity=0.667 Sum_probs=13.7
Q ss_pred hhhHHHHHHHHHHHhC
Q 032446 95 SLDTVEIVMSLEEEFG 110 (140)
Q Consensus 95 SLd~vELv~~lEeefg 110 (140)
=+.+.||+-.+|++||
T Consensus 15 vlEl~eLvk~lEe~fG 30 (30)
T 1zav_U 15 VSELAELVKKLEDKFG 30 (30)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHhC
Confidence 3667899999999998
No 55
>3ufe_A Transcriptional antiterminator (BGLG family); extended helix bundle, arcimboldo; 1.50A {Bacillus subtilis} PDB: 3gwh_A
Probab=41.39 E-value=15 Score=23.57 Aligned_cols=21 Identities=14% Similarity=0.253 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHhCCccCcccc
Q 032446 98 TVEIVMSLEEEFGIGVEEENS 118 (140)
Q Consensus 98 ~vELv~~lEeefgI~i~~~~l 118 (140)
..++...||+.||+++|++++
T Consensus 79 a~~i~~~ie~~~~i~i~~~Ei 99 (111)
T 3ufe_A 79 AWKLIKILQQTLKKPVHEAEA 99 (111)
T ss_dssp HHHHHHHHHHHHCSCCCTHHH
T ss_pred HHHHHHHHHHHHCCCCCHHHH
Confidence 456788899999999999875
No 56
>3s93_A Tudor domain-containing protein 5; structural genomics consortium, SGC, transcription; 2.28A {Homo sapiens}
Probab=41.15 E-value=56 Score=21.67 Aligned_cols=47 Identities=19% Similarity=0.254 Sum_probs=29.0
Q ss_pred CChHHHHHHHHHHHHHHhCCCCCCCCC-------------CCCCccccCCChhhHHHHHHHHH
Q 032446 57 SAKPETVQKVCEIVRRQLALPAETELT-------------SESKFSALGADSLDTVEIVMSLE 106 (140)
Q Consensus 57 m~~~ei~~~v~~ii~e~l~i~~~~~I~-------------~d~~l~dLGlDSLd~vELv~~lE 106 (140)
|+++++.+.|+.+|...+--.. ..++ ..-+|..||.+|+ .+++..+-
T Consensus 3 ~~~~~~l~~vkk~irslLiS~K-~gvtl~~L~~dYr~~~G~~iP~r~lGy~sl--~~fL~sip 62 (102)
T 3s93_A 3 SEQERIQECLRKEIRSLLISTK-DGLSPQELEKEYLLMVGNHLPLRILGYRST--MELVLDMP 62 (102)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSS-SCBCHHHHHHHHHHHHSSCCCTGGGTCSSH--HHHHHTCT
T ss_pred ccHHHHHHHHHHHHHHhheeCC-CCcCHHHHHHHHHHHcCCcCCchhcCcCCH--HHHHHcCC
Confidence 5678999999999988874333 2222 3445556777766 34444443
No 57
>2pls_A CBS domain protein; APC86064.2, CORC/HLYC transporter associated domain, CBS DOM protein, structural genomics, PSI-2 structure initiative; 2.15A {Chlorobium tepidum tls} SCOP: d.145.1.4
Probab=37.25 E-value=36 Score=21.28 Aligned_cols=28 Identities=21% Similarity=0.256 Sum_probs=19.1
Q ss_pred HHHHHHhCCc-cCccccccCCcHHHHHHH
Q 032446 103 MSLEEEFGIG-VEEENSQNITTVQEAADL 130 (140)
Q Consensus 103 ~~lEeefgI~-i~~~~l~~~~TV~dl~~~ 130 (140)
-.+++.||++ +|+++..+..|++.++-.
T Consensus 20 ~dl~~~l~~~~l~~~~~~~~~Tl~G~i~~ 48 (86)
T 2pls_A 20 PELKDTLGLRAVPEEEKGVYHTLSGMIMW 48 (86)
T ss_dssp HHHHHHHTCSCCTTTTSCSCCBHHHHHHH
T ss_pred HHHHHHhCCCcCCCccCCCcccHHHHHHH
Confidence 4578889998 886321356788887643
No 58
>2oai_A Hemolysin; PFAM03471, xylella fastidiosa temecula1, structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; HET: MLY; 1.80A {Xylella fastidiosa} SCOP: d.145.1.4 PDB: 2r8d_A*
Probab=34.47 E-value=32 Score=21.99 Aligned_cols=29 Identities=17% Similarity=0.225 Sum_probs=15.5
Q ss_pred HHHHHHHhCCccCccccccCCcHHHHHHH
Q 032446 102 VMSLEEEFGIGVEEENSQNITTVQEAADL 130 (140)
Q Consensus 102 v~~lEeefgI~i~~~~l~~~~TV~dl~~~ 130 (140)
+-.+++.||+.+|.++-....|++.++-.
T Consensus 28 l~dl~~~l~~~l~~~~~~~~dTlgG~i~~ 56 (94)
T 2oai_A 28 IEELREVLGAELPDGEENNYHTLAGMCIS 56 (94)
T ss_dssp HHHHHHHHTC-------CCCSBHHHHHHH
T ss_pred HHHHHHHhCCCCCcccCCCCccHHHHHHH
Confidence 34578889999986321356788887643
No 59
>1uhr_A SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily...; structural genomics, chromatin remodeling; NMR {Mus musculus} SCOP: a.42.1.1
Probab=34.31 E-value=31 Score=22.47 Aligned_cols=56 Identities=9% Similarity=0.142 Sum_probs=44.5
Q ss_pred ccCChHHHHHHHHHHHHHHhCCCCC--CCCCCCCCcc-ccCCChhhHHHHHHHHHHHhC
Q 032446 55 SCSAKPETVQKVCEIVRRQLALPAE--TELTSESKFS-ALGADSLDTVEIVMSLEEEFG 110 (140)
Q Consensus 55 ~~m~~~ei~~~v~~ii~e~l~i~~~--~~I~~d~~l~-dLGlDSLd~vELv~~lEeefg 110 (140)
..+++.++...|.+.|++.--.++. ..|.-|..|. =+|.|.+.+.++...|...|-
T Consensus 25 ~~~sr~evvk~lW~YIK~n~Lqdp~~k~~I~cD~~Lk~lfg~~~v~~~~~~klL~~Hl~ 83 (93)
T 1uhr_A 25 HTQTRPVIIQALWQYIKTHKLQDPHEREFVLCDKYLQQIFESQRMKFSEIPQRLHALLM 83 (93)
T ss_dssp SEEEHHHHHHHHHHHHHHTTCBCSSCSSEECCCTTHHHHTCCSSEEGGGSHHHHHHHEE
T ss_pred CccCHHHHHHHHHHHHHhccCCCccccceeechHHHHHHhCCCcccHHHHHHHHHHhcC
Confidence 4578999999999999986433331 3588999998 579999999999999887764
No 60
>3lae_A UPF0053 protein HI0107; APC85784.2, conserved protein, haemophilus influenzae RD KW20, structural genomics, PSI-2; HET: MSE; 1.45A {Haemophilus influenzae} SCOP: d.145.1.4 PDB: 2o1r_A*
Probab=34.21 E-value=41 Score=20.80 Aligned_cols=24 Identities=17% Similarity=0.188 Sum_probs=17.9
Q ss_pred HHHHHHhCCccCccccccCCcHHHHHH
Q 032446 103 MSLEEEFGIGVEEENSQNITTVQEAAD 129 (140)
Q Consensus 103 ~~lEeefgI~i~~~~l~~~~TV~dl~~ 129 (140)
-.+++.||+++|++ +..|++.++-
T Consensus 20 ~dl~~~l~~~l~~~---~~~Tl~G~i~ 43 (81)
T 3lae_A 20 RDLNKMFNWELDTE---DARTFNGLIL 43 (81)
T ss_dssp HHHHHHHCCCCCCS---SCSBHHHHHH
T ss_pred HHHHHHhCCCCCCC---CCccHHHHHH
Confidence 46788999999864 4568888754
No 61
>1v32_A AT5G08430, hypothetical protein RAFL09-47-K03; SWI/SNF complex subunit, structural genomics; NMR {Arabidopsis thaliana} SCOP: a.42.1.1
Probab=32.89 E-value=32 Score=22.93 Aligned_cols=57 Identities=7% Similarity=0.229 Sum_probs=46.0
Q ss_pred cCChHHHHHHHHHHHHHHhCCCC--CCCCCCCCCcc-ccCCChhhHHHHHHHHHHHhCCc
Q 032446 56 CSAKPETVQKVCEIVRRQLALPA--ETELTSESKFS-ALGADSLDTVEIVMSLEEEFGIG 112 (140)
Q Consensus 56 ~m~~~ei~~~v~~ii~e~l~i~~--~~~I~~d~~l~-dLGlDSLd~vELv~~lEeefgI~ 112 (140)
.+++.++...|.+.|++.---++ -..|..|..|. =+|-|.+.+.++...|...|--.
T Consensus 34 ~~sR~eVvk~lW~YIK~nnLQdp~~Kr~I~cD~kLk~lFg~~~v~~~~m~klL~~Hl~~~ 93 (101)
T 1v32_A 34 MISRYDVSDTIAKYISKEGLLDPSNKKKVVCDKRLVLLFGTRTIFRMKVYDLLEKHYKEN 93 (101)
T ss_dssp CCCHHHHHHHHHHHHHHHTCBCSSCTTEEECCSHHHHHTCCSEEETTHHHHHHHHHSCSC
T ss_pred ccCHHHHHHHHHHHHHhhcCcCcccCCeeeccHHHHHHHCCCcccHHHHHHHHHHHcCcc
Confidence 58999999999999998743333 13678888888 57999999999999999988643
No 62
>2zjq_5 50S ribosomal protein L7/L12; ribosome, ribosomal subunit, thiopeptide antibiotics, complex, translational regulation, molecular switch; 3.30A {Deinococcus radiodurans} SCOP: d.45.1.1
Probab=32.51 E-value=27 Score=24.28 Aligned_cols=21 Identities=14% Similarity=0.450 Sum_probs=17.2
Q ss_pred CChhhHHHHHHHHHHHhCCcc
Q 032446 93 ADSLDTVEIVMSLEEEFGIGV 113 (140)
Q Consensus 93 lDSLd~vELv~~lEeefgI~i 113 (140)
+.=+...||+-.||++|||+-
T Consensus 15 ltllE~~eLv~~lee~fgv~a 35 (122)
T 2zjq_5 15 LTIMELADLIDGLKETWGVTA 35 (122)
T ss_pred CCHHHHHHHHHHHHHHcCCCC
Confidence 334677899999999999973
No 63
>3llb_A Uncharacterized protein; protein PA3983, unknown function, structural genomics, PSI2, MCSG, protein structure initiative; 1.80A {Pseudomonas aeruginosa} SCOP: d.145.1.0
Probab=32.37 E-value=45 Score=20.72 Aligned_cols=25 Identities=20% Similarity=0.231 Sum_probs=18.4
Q ss_pred HHHHHHhCCccCccccccCCcHHHHHHH
Q 032446 103 MSLEEEFGIGVEEENSQNITTVQEAADL 130 (140)
Q Consensus 103 ~~lEeefgI~i~~~~l~~~~TV~dl~~~ 130 (140)
-.+++.||+++|++ +..|++.++-.
T Consensus 20 ~dl~~~l~~~l~~~---~~~Tl~G~i~~ 44 (83)
T 3llb_A 20 DAFNDFFGSEFSDE---EFDTVGGLVMS 44 (83)
T ss_dssp HHHHHHHCCCCCTT---TCSBHHHHHHH
T ss_pred HHHHHHhCCCCCCC---CCcCHHHHHHH
Confidence 46788999999864 45688887543
No 64
>2j01_L 50S ribosomal protein L7; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus} PDB: 2j03_L 3i8i_I
Probab=32.36 E-value=27 Score=24.34 Aligned_cols=20 Identities=20% Similarity=0.493 Sum_probs=16.8
Q ss_pred ChhhHHHHHHHHHHHhCCcc
Q 032446 94 DSLDTVEIVMSLEEEFGIGV 113 (140)
Q Consensus 94 DSLd~vELv~~lEeefgI~i 113 (140)
.=|...||+-.||++|||+-
T Consensus 16 tllE~~eLv~~lee~fgv~a 35 (125)
T 2j01_L 16 TVLELKQLIDALKEAWGVTA 35 (125)
T ss_pred CHHHHHHHHHHHHHHcCCCc
Confidence 34677899999999999973
No 65
>2rk5_A Putative hemolysin; structural genomics, PSI-2, MCSG, protein structure initiative, midwest center for structural genomics, membrane; 1.50A {Streptococcus mutans UA159} SCOP: d.145.1.4
Probab=32.25 E-value=44 Score=20.93 Aligned_cols=24 Identities=21% Similarity=0.267 Sum_probs=18.0
Q ss_pred HHHHHHhCCccCccccccCCcHHHHHH
Q 032446 103 MSLEEEFGIGVEEENSQNITTVQEAAD 129 (140)
Q Consensus 103 ~~lEeefgI~i~~~~l~~~~TV~dl~~ 129 (140)
-.+++.||+++|++ +..|++.++-
T Consensus 19 ~dl~~~l~~~l~~~---~~dTl~G~v~ 42 (87)
T 2rk5_A 19 NDFNEYFETDLESD---NVDTIAGFYL 42 (87)
T ss_dssp HHHHHHHTCCCCCT---TCCBHHHHHH
T ss_pred HHHHHHhCCCCCCC---CcccHHHHHH
Confidence 45788899999864 4678888754
No 66
>2p3h_A Uncharacterized CBS domain-containing protein; structural genomics, CORC_HLYC, PFAM03471, putative transpor protein; 1.80A {Corynebacterium glutamicum} SCOP: d.145.1.4
Probab=31.12 E-value=46 Score=21.86 Aligned_cols=25 Identities=16% Similarity=0.118 Sum_probs=18.5
Q ss_pred HHHHHHhCCccCccccccCCcHHHHHHH
Q 032446 103 MSLEEEFGIGVEEENSQNITTVQEAADL 130 (140)
Q Consensus 103 ~~lEeefgI~i~~~~l~~~~TV~dl~~~ 130 (140)
-.+++.||+++|++ +..|++.++-.
T Consensus 23 ~dl~~~lg~~l~~e---~~dTlgGli~~ 47 (101)
T 2p3h_A 23 DEVERAIGYELPEG---DYETISGLLFD 47 (101)
T ss_dssp HHHHHHHTSCCCCS---SCCBHHHHHHH
T ss_pred HHHHHHhCCCCCCC---CCccHHHHHHH
Confidence 45788899999864 46788887543
No 67
>3b1l_X E3 ubiquitin-protein ligase parkin; proteasome, ALFA-beta-protein; 1.85A {Mus musculus} PDB: 1mg8_A 2zeq_A 2knb_A 1iyf_A
Probab=36.39 E-value=11 Score=22.61 Aligned_cols=48 Identities=21% Similarity=0.308 Sum_probs=30.4
Q ss_pred ChHHHHHHHHHHHHHHhCCCCC--------CCCCCCCCccccCCChhhHHHHHHHH
Q 032446 58 AKPETVQKVCEIVRRQLALPAE--------TELTSESKFSALGADSLDTVEIVMSL 105 (140)
Q Consensus 58 ~~~ei~~~v~~ii~e~l~i~~~--------~~I~~d~~l~dLGlDSLd~vELv~~l 105 (140)
....++..+++.|.+..+++++ ..+.++..|.++|+..-..+.++..+
T Consensus 18 ~~~~tV~~lK~~i~~~~gi~~~~qrL~~~gk~L~d~~tL~~~~i~~g~~i~l~~rl 73 (76)
T 3b1l_X 18 DSDTSILQLKEVVAKQQGVPADQLRVIFAGKELPNHLTVQNCDLEQQSIVHIVQRP 73 (76)
Confidence 3456777888888887777652 12455666667777655555555443
No 68
>2bnk_A Early protein GP16.7; DNA-binding protein; 2.9A {Bacillus phage PHI29} SCOP: a.251.1.1 PDB: 2c5r_A 1zae_A
Probab=29.61 E-value=58 Score=19.88 Aligned_cols=33 Identities=24% Similarity=0.258 Sum_probs=25.5
Q ss_pred HHHHHhCCccCcccc-----ccCCcHHHHHHHHHHHHH
Q 032446 104 SLEEEFGIGVEEENS-----QNITTVQEAADLIEKLVE 136 (140)
Q Consensus 104 ~lEeefgI~i~~~~l-----~~~~TV~dl~~~I~~~~~ 136 (140)
.+=++-||.||.+-+ .++.|-+++.+||+.+..
T Consensus 14 DlYe~SnIrIP~DIIEdl~~~~L~te~EVmnYiEnqR~ 51 (67)
T 2bnk_A 14 DLYEQSNIRIPSDIIEDLVNQRLQSEQEVLNYIETQRT 51 (67)
T ss_dssp HHHHHTTCCCCHHHHHHHHTTCCCCSHHHHHHHHHHHH
T ss_pred HHHHHcCCcCcHHHHHHHHHHhhhhHHHHHHHHHhhHh
Confidence 344667999997643 578899999999987653
No 69
>2pag_A Hypothetical protein; nysgx, target 10412I, novel fold, structural genomics, PSI-2 structure initiative; 1.60A {Pseudomonas syringae PV} SCOP: d.369.1.1
Probab=28.80 E-value=28 Score=24.04 Aligned_cols=18 Identities=17% Similarity=0.228 Sum_probs=16.2
Q ss_pred HHHHHHHHHHhCCccCcc
Q 032446 99 VEIVMSLEEEFGIGVEEE 116 (140)
Q Consensus 99 vELv~~lEeefgI~i~~~ 116 (140)
-+.+..+|+++|+++|.+
T Consensus 24 ~e~I~~~E~~Lgi~fP~d 41 (135)
T 2pag_A 24 EDQLVEIEEQLFINIPFV 41 (135)
T ss_dssp HHHHHHHHHHHTCCCCHH
T ss_pred HHHHHHHHHHHCCCCCHH
Confidence 578899999999999985
No 70
>2ftc_E L12MT, MRP-L12, 39S ribosomal protein L12, mitochondrial; mitochondrial ribosome, large ribosomal subunit, ribosomal R ribosome; 12.10A {Bos taurus}
Probab=28.31 E-value=36 Score=24.05 Aligned_cols=19 Identities=16% Similarity=0.219 Sum_probs=16.4
Q ss_pred ChhhHHHHHHHHHHHhCCc
Q 032446 94 DSLDTVEIVMSLEEEFGIG 112 (140)
Q Consensus 94 DSLd~vELv~~lEeefgI~ 112 (140)
.=|...||+-.||++|||+
T Consensus 14 tllE~~eLv~~leekfgv~ 32 (137)
T 2ftc_E 14 TLLEISDLNELLKKTLKIQ 32 (137)
T ss_pred CHHHHHHHHHHHHHHhCCC
Confidence 3467789999999999997
No 71
>2p13_A CBS domain; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; 1.65A {Nitrosomonas europaea} SCOP: d.145.1.4
Probab=27.70 E-value=62 Score=20.31 Aligned_cols=28 Identities=7% Similarity=0.029 Sum_probs=19.0
Q ss_pred HHHHHHHhCCccCccccccCCcHHHHHHH
Q 032446 102 VMSLEEEFGIGVEEENSQNITTVQEAADL 130 (140)
Q Consensus 102 v~~lEeefgI~i~~~~l~~~~TV~dl~~~ 130 (140)
+-.+++.||+++|++ -....|++.++-.
T Consensus 25 l~dl~~~l~~~l~~~-~~~~~TlgG~i~~ 52 (90)
T 2p13_A 25 IRKASNLLEHDLVDE-AERYSTLGGYLLW 52 (90)
T ss_dssp HHHHHHHHTSCCCCT-TCCCCBHHHHHHH
T ss_pred HHHHHHHHCCCCCCc-CCCCccHHHHHHH
Confidence 345788899999863 1246788887543
No 72
>3rio_A PTSGHI operon antiterminator; twisted beta sheet, four helix bundle, transcriptional antitermination, transcription; 1.99A {Bacillus subtilis}
Probab=27.47 E-value=35 Score=24.48 Aligned_cols=21 Identities=19% Similarity=0.336 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHhCCccCcccc
Q 032446 98 TVEIVMSLEEEFGIGVEEENS 118 (140)
Q Consensus 98 ~vELv~~lEeefgI~i~~~~l 118 (140)
..+++..|++.||+.+|++++
T Consensus 147 a~~~~~~Ie~~~~i~lpedEi 167 (180)
T 3rio_A 147 AKEVIDMINEKAGLCLPEGEI 167 (180)
T ss_dssp HHHHHHHHHHHHTSCCCTTHH
T ss_pred HHHHHHHHHHHHCCCCCHHHH
Confidence 356888899999999999885
No 73
>2pli_A Uncharacterized protein; CORC-associated region, MCSG, PSI2, structural genomics, Pro structure initiative; 1.70A {Neisseria meningitidis} SCOP: d.145.1.4
Probab=27.31 E-value=61 Score=20.44 Aligned_cols=26 Identities=15% Similarity=0.179 Sum_probs=18.8
Q ss_pred HHHHHHHhCCccCccccccCCcHHHHHHH
Q 032446 102 VMSLEEEFGIGVEEENSQNITTVQEAADL 130 (140)
Q Consensus 102 v~~lEeefgI~i~~~~l~~~~TV~dl~~~ 130 (140)
+-.+++.||+++|.+ ...|++.++-.
T Consensus 28 l~dl~~~l~~~l~~~---~~dTlgG~i~~ 53 (91)
T 2pli_A 28 IEDINTFFGTEYSSE---EADTIGGLVIQ 53 (91)
T ss_dssp HHHHHHHHCCCCCCS---SCCBHHHHHHH
T ss_pred HHHHHHHhCCCCCCC---CCccHHHHHHH
Confidence 345788899999864 46788887543
No 74
>1dd3_A 50S ribosomal protein L7/L12; dimer formation, flexibility, hinge region, four-helix-bundl helix- bundle, alpha-beta structure; 2.00A {Thermotoga maritima} SCOP: a.108.1.1 d.45.1.1 PDB: 1dd4_A* 1giy_I 1yl3_I
Probab=27.18 E-value=27 Score=24.45 Aligned_cols=20 Identities=30% Similarity=0.547 Sum_probs=17.0
Q ss_pred CChhhHHHHHHHHHHHhCCc
Q 032446 93 ADSLDTVEIVMSLEEEFGIG 112 (140)
Q Consensus 93 lDSLd~vELv~~lEeefgI~ 112 (140)
+.=+...||+-.||++|||+
T Consensus 13 ltllE~~eLv~~lee~fgv~ 32 (128)
T 1dd3_A 13 LTVSELAELVKKLEDKFGVT 32 (128)
T ss_dssp SCHHHHHHHHHHHHHHHCHH
T ss_pred CCHHHHHHHHHHHHHHhCCC
Confidence 34567889999999999997
No 75
>3u5e_m 60S ribosomal protein L40; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3u5i_m 4b6a_m 4a18_K 4a19_K 4a1b_K 4a1d_K 4adx_5 3izc_p 3izs_p 3iz5_p 3izr_p
Probab=27.18 E-value=13 Score=25.21 Aligned_cols=48 Identities=17% Similarity=0.356 Sum_probs=0.0
Q ss_pred ChHHHHHHHHHHHHHHhCCCCC--------CCCCCCCCccccCCChhhHHHHHHHH
Q 032446 58 AKPETVQKVCEIVRRQLALPAE--------TELTSESKFSALGADSLDTVEIVMSL 105 (140)
Q Consensus 58 ~~~ei~~~v~~ii~e~l~i~~~--------~~I~~d~~l~dLGlDSLd~vELv~~l 105 (140)
+..+++..|++.|.+..+++++ ..+.++..|.++|+..-+.+.++..+
T Consensus 18 ~~~~TV~~LK~~I~~~~gip~~~QrLi~~Gk~L~D~~tL~~~~I~~gsti~l~~rl 73 (128)
T 3u5e_m 18 ESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73 (128)
T ss_dssp --------------------------------------------------------
T ss_pred CCCCCHHHHHHHHHHHhCcChHHEEEEECCEECCCCCchhhhccCCCCEEEEEEEc
Confidence 4567788888888888777652 23667777888888777777777655
No 76
>3ded_A Probable hemolysin; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG, membrane; HET: MSE; 2.14A {Chromobacterium violaceum} SCOP: d.145.1.4
Probab=26.87 E-value=62 Score=21.55 Aligned_cols=30 Identities=20% Similarity=0.184 Sum_probs=20.9
Q ss_pred HHHHHHHhCCc--cCccccccCCcHHHHHHHH
Q 032446 102 VMSLEEEFGIG--VEEENSQNITTVQEAADLI 131 (140)
Q Consensus 102 v~~lEeefgI~--i~~~~l~~~~TV~dl~~~I 131 (140)
+-.+++.||+. +|.++-..+.|++.++-..
T Consensus 45 l~dl~e~lg~~~~l~~~~~~~~dTlgGlil~~ 76 (113)
T 3ded_A 45 LDRFREFFELEAPLPGEAGGNIHTLAGVMLYQ 76 (113)
T ss_dssp HHHHHHHTTCCSCCTTGGGTCCCBHHHHHHHH
T ss_pred HHHHHHHhCCCccCCcccCCCCccHHHHHHHH
Confidence 35678899998 8863334577998876443
No 77
>2r2z_A Hemolysin; APC85144, enterococcus faecalis V583, STRU initiative, midwest center for structural genomics, MCSG; 1.20A {Enterococcus faecalis} SCOP: d.145.1.4
Probab=26.79 E-value=61 Score=20.40 Aligned_cols=26 Identities=12% Similarity=0.142 Sum_probs=18.8
Q ss_pred HHHHHHHhCCccCccccccCCcHHHHHHH
Q 032446 102 VMSLEEEFGIGVEEENSQNITTVQEAADL 130 (140)
Q Consensus 102 v~~lEeefgI~i~~~~l~~~~TV~dl~~~ 130 (140)
+-.+++.||+.+|.+ ...|++.++-.
T Consensus 26 l~dl~~~l~~~l~~~---~~~TlgG~i~~ 51 (93)
T 2r2z_A 26 IDEFNEVFETDLHMS---DVDTMAGYLIT 51 (93)
T ss_dssp HHHHHHHHTCCCCCT---TCCBHHHHHHH
T ss_pred HHHHHHHhCCCCCCC---CcccHHHHHHH
Confidence 345788899999864 46788887543
No 78
>2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A
Probab=25.80 E-value=3 Score=31.96 Aligned_cols=42 Identities=7% Similarity=0.101 Sum_probs=28.4
Q ss_pred cCChHHHHHHHHHHHHHHhCCCCCCCCCCCCCccccCCChhhHHHHHHHHHHHhC
Q 032446 56 CSAKPETVQKVCEIVRRQLALPAETELTSESKFSALGADSLDTVEIVMSLEEEFG 110 (140)
Q Consensus 56 ~m~~~ei~~~v~~ii~e~l~i~~~~~I~~d~~l~dLGlDSLd~vELv~~lEeefg 110 (140)
..++.++++.|.+++++.|+++. +.+|++| +.++..|++.|.
T Consensus 23 ~~P~~~~E~~la~iw~~vL~~~~------~d~Ff~l-------~~l~~~~~~~f~ 64 (319)
T 2hfk_A 23 GADTGAGAGMFRALFRQAVEDDR------YGEFLDV-------LAEASAFRPQFA 64 (319)
T ss_dssp -------CCHHHHHHHHHHHTTC------HHHHHHH-------HHHHHTTSCEEC
T ss_pred CCCCCchHHHHHHHHHHHHcCCc------hHHHHHH-------HHHHHHHHHhcC
Confidence 35677888999999999999853 7788888 777887776654
No 79
>2p4p_A Hypothetical protein HD1797; CORC_HLYC, PFAM: PF03471, structural GE PSI-2, protein structure initiative, midwest center for STR genomics; HET: MLY MSE; 1.80A {Haemophilus ducreyi} SCOP: d.145.1.4
Probab=25.16 E-value=68 Score=19.92 Aligned_cols=26 Identities=12% Similarity=0.106 Sum_probs=17.7
Q ss_pred HHHHHHhCCc-cCccccccCCcHHHHHHH
Q 032446 103 MSLEEEFGIG-VEEENSQNITTVQEAADL 130 (140)
Q Consensus 103 ~~lEeefgI~-i~~~~l~~~~TV~dl~~~ 130 (140)
-.+++.||++ +|.++ ...|++.++-.
T Consensus 20 ~dl~~~l~~~~l~~~~--~~~Tl~G~i~~ 46 (86)
T 2p4p_A 20 EDVMRALNIHTFPRDE--NYETIGGFMMY 46 (86)
T ss_dssp HHHHHHTTCCCSCCSC--SSCBHHHHHHH
T ss_pred HHHHHHhCCCCCCcCC--CCccHHHHHHH
Confidence 4578889996 87532 46788887543
No 80
>3u5c_f 40S ribosomal protein S31; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3u5g_f
Probab=23.38 E-value=17 Score=25.81 Aligned_cols=49 Identities=16% Similarity=0.352 Sum_probs=0.0
Q ss_pred ChHHHHHHHHHHHHHHhCCCCC--------CCCCCCCCccccCCChhhHHHHHHHHH
Q 032446 58 AKPETVQKVCEIVRRQLALPAE--------TELTSESKFSALGADSLDTVEIVMSLE 106 (140)
Q Consensus 58 ~~~ei~~~v~~ii~e~l~i~~~--------~~I~~d~~l~dLGlDSLd~vELv~~lE 106 (140)
...+++..|++.|.+..+++++ ..+.++..|.++|+..-+.+.++..+.
T Consensus 18 ~~~~TV~~LK~~I~~~~gip~~~QrLi~~Gk~L~D~~tL~dygI~~gstL~Lvlrl~ 74 (152)
T 3u5c_f 18 ESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74 (152)
T ss_dssp ---------------------------------------------------------
T ss_pred CCCCCHHHHHHHHHHHhCCCHHHEEEEECCEEccccCcHHHcCCCCCCEEEEEeecc
Confidence 4567778888888887777652 246667777788887777777776654
No 81
>3a9j_A Ubiquitin; protein complex, cytoplasm, isopeptide bond, metal-binding, zinc; 1.18A {Mus musculus} PDB: 3a1q_B 2znv_B 3a9k_A 3h7p_A 3jsv_A 3dvg_Y 3dvn_Y 3nob_A 2o6v_D* 3jw0_X 3jvz_X 3nhe_B* 1aar_A 1d3z_A 1f9j_A 1fxt_B 1g6j_A 1nbf_C 1cmx_B 1q5w_B ...
Probab=23.15 E-value=52 Score=19.08 Aligned_cols=37 Identities=14% Similarity=0.323 Sum_probs=26.1
Q ss_pred ChHHHHHHHHHHHHHHhCCCCC--------CCCCCCCCccccCCC
Q 032446 58 AKPETVQKVCEIVRRQLALPAE--------TELTSESKFSALGAD 94 (140)
Q Consensus 58 ~~~ei~~~v~~ii~e~l~i~~~--------~~I~~d~~l~dLGlD 94 (140)
+...+...+++.|.+..++++. ..+.++..|.++|+.
T Consensus 18 ~~~~tv~~lK~~i~~~~~i~~~~q~L~~~g~~L~d~~tL~~~~i~ 62 (76)
T 3a9j_A 18 EPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 62 (76)
T ss_dssp CTTCBHHHHHHHHHHHHCCCGGGEEEEETTEECCTTCBTGGGTCC
T ss_pred CCCCcHHHHHHHHHHHHCcCHHHeEEEECCeECCCCCcHHHcCCC
Confidence 3457788899999999998752 135566677777763
No 82
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=23.09 E-value=73 Score=17.81 Aligned_cols=21 Identities=24% Similarity=0.381 Sum_probs=18.0
Q ss_pred ChHHHHHHHHHHHHHHhCCCC
Q 032446 58 AKPETVQKVCEIVRRQLALPA 78 (140)
Q Consensus 58 ~~~ei~~~v~~ii~e~l~i~~ 78 (140)
.+.++.+.|.+.+.+.+++++
T Consensus 15 ~k~~l~~~i~~~l~~~lg~p~ 35 (62)
T 1otf_A 15 QKETLIRQVSEAMANSLDAPL 35 (62)
T ss_dssp HHHHHHHHHHHHHHHHHTCCG
T ss_pred HHHHHHHHHHHHHHHHhCcCc
Confidence 456788889999999999987
No 83
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=22.95 E-value=75 Score=17.74 Aligned_cols=21 Identities=29% Similarity=0.329 Sum_probs=17.9
Q ss_pred ChHHHHHHHHHHHHHHhCCCC
Q 032446 58 AKPETVQKVCEIVRRQLALPA 78 (140)
Q Consensus 58 ~~~ei~~~v~~ii~e~l~i~~ 78 (140)
.+..+.+.|.+.+.+.+++++
T Consensus 15 qk~~l~~~i~~~l~~~lg~~~ 35 (61)
T 2opa_A 15 QKRNLVEKVTEAVKETTGASE 35 (61)
T ss_dssp HHHHHHHHHHHHHHHHHCCCG
T ss_pred HHHHHHHHHHHHHHHHhCcCc
Confidence 456788889999999999987
No 84
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=22.61 E-value=92 Score=17.85 Aligned_cols=21 Identities=14% Similarity=0.251 Sum_probs=18.3
Q ss_pred ChHHHHHHHHHHHHHHhCCCC
Q 032446 58 AKPETVQKVCEIVRRQLALPA 78 (140)
Q Consensus 58 ~~~ei~~~v~~ii~e~l~i~~ 78 (140)
.+.++.+.|.+.+.+.+|+++
T Consensus 14 qK~~L~~~it~~~~~~lg~~~ 34 (62)
T 3m20_A 14 KKREFVERLTSVAAEIYGMDR 34 (62)
T ss_dssp HHHHHHHHHHHHHHHHHTCCT
T ss_pred HHHHHHHHHHHHHHHHhCcCc
Confidence 467888999999999999987
No 85
>2dzi_A Ubiquitin-like protein 4A; GDX, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.00 E-value=59 Score=19.26 Aligned_cols=37 Identities=19% Similarity=0.359 Sum_probs=25.4
Q ss_pred ChHHHHHHHHHHHHHHhCCCCCC--------CCCCCCCccccCCC
Q 032446 58 AKPETVQKVCEIVRRQLALPAET--------ELTSESKFSALGAD 94 (140)
Q Consensus 58 ~~~ei~~~v~~ii~e~l~i~~~~--------~I~~d~~l~dLGlD 94 (140)
....++..+++.|.+..++++.. .+.++..|.++|+.
T Consensus 25 ~~~~tV~~LK~~i~~~~~i~~~~qrL~~~gk~L~d~~tL~~~~i~ 69 (81)
T 2dzi_A 25 PEDELVSTLKQLVSEKLNVPVRQQRLLFKGKALADGKRLSDYSIG 69 (81)
T ss_dssp CSSCBHHHHHHHHHHHTCCCTTTCEEEETTEECCTTSBGGGGTCC
T ss_pred CCCCcHHHHHHHHHHHHCcCHHHEEEEECCeECCCCCcHHHcCCC
Confidence 34567888999999999987621 24556666677663
No 86
>3n3k_B Ubiquitin; hydrolase, protease, thiol protease, DUB, zinc ribbon, inhibitor, ubiqu acetylation, cytoplasm, isopeptide bond, nucleus; 2.60A {Homo sapiens} SCOP: d.15.1.1
Probab=21.81 E-value=68 Score=19.14 Aligned_cols=38 Identities=13% Similarity=0.318 Sum_probs=27.5
Q ss_pred ChHHHHHHHHHHHHHHhCCCCC--------CCCCCCCCccccCCCh
Q 032446 58 AKPETVQKVCEIVRRQLALPAE--------TELTSESKFSALGADS 95 (140)
Q Consensus 58 ~~~ei~~~v~~ii~e~l~i~~~--------~~I~~d~~l~dLGlDS 95 (140)
....++..|++.|.+..+++++ ..+.++..|.++|+..
T Consensus 21 ~~~~tV~~lK~~i~~~~~ip~~~qrL~~~g~~L~d~~tL~~~~i~~ 66 (85)
T 3n3k_B 21 EPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIHN 66 (85)
T ss_dssp CTTCBHHHHHHHHHHHHCCCGGGEEEEETBEECCTTCBTTTTTCCT
T ss_pred CCCCcHHHHHHHHHHHHCCCHHHEEEEECCeECCCCCCHHHCCCCC
Confidence 4567888999999999998762 1356677777777644
No 87
>2kd0_A LRR repeats and ubiquitin-like domain-containing protein AT2G30105; ubiquitin-like protein, NESG, leucine-rich repeat, structural genomics; NMR {Arabidopsis thaliana}
Probab=21.33 E-value=68 Score=19.79 Aligned_cols=37 Identities=11% Similarity=0.044 Sum_probs=25.5
Q ss_pred ChHHHHHHHHHHHHHHhCCCCCC--------CCCCCCCccccCCC
Q 032446 58 AKPETVQKVCEIVRRQLALPAET--------ELTSESKFSALGAD 94 (140)
Q Consensus 58 ~~~ei~~~v~~ii~e~l~i~~~~--------~I~~d~~l~dLGlD 94 (140)
+...++..|++.|.+..+++++. .+.++..|.++|+.
T Consensus 29 ~~~~TV~~LK~~I~~~~gip~~~qrL~~~Gk~L~D~~tL~~~gi~ 73 (85)
T 2kd0_A 29 SPDCTVKDLKSQLQPITNVLPRGQKLIFKGKVLVETSTLKQSDVG 73 (85)
T ss_dssp CTTSBHHHHHHHHHHHHCCCTTTCEEEETTEECCTTCBTTTTTCC
T ss_pred CCCCcHHHHHHHHHHHHCcChHHEEEEECCeECCCcCCHHHCCCC
Confidence 34567888999999999987621 24566666677653
No 88
>1ndd_A NEDD8, protein (ubiquitin-like protein NEDD8); proteolysis, signaling protei; 1.60A {Homo sapiens} SCOP: d.15.1.1 PDB: 1r4m_I 1r4n_I* 1xt9_B 2ko3_A 3gzn_I* 2bkr_B 2nvu_I* 3dqv_A 1bt0_A
Probab=21.29 E-value=62 Score=18.73 Aligned_cols=37 Identities=14% Similarity=0.267 Sum_probs=26.1
Q ss_pred ChHHHHHHHHHHHHHHhCCCCC--------CCCCCCCCccccCCC
Q 032446 58 AKPETVQKVCEIVRRQLALPAE--------TELTSESKFSALGAD 94 (140)
Q Consensus 58 ~~~ei~~~v~~ii~e~l~i~~~--------~~I~~d~~l~dLGlD 94 (140)
....+...+++.|.+..++++. ..+.++..|.++|+.
T Consensus 18 ~~~~tv~~lK~~i~~~~~i~~~~q~L~~~g~~L~d~~tL~~~~i~ 62 (76)
T 1ndd_A 18 EPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKIL 62 (76)
T ss_dssp CTTCBHHHHHHHHHHHHCCCGGGEEEEETTEECCTTSBGGGGTCC
T ss_pred CCCChHHHHHHHHHHHHCcChHHEEEEECCEECCCCCcHHHcCCC
Confidence 3457788899999999998762 125566677777764
No 89
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=20.43 E-value=78 Score=17.85 Aligned_cols=21 Identities=33% Similarity=0.466 Sum_probs=18.0
Q ss_pred ChHHHHHHHHHHHHHHhCCCC
Q 032446 58 AKPETVQKVCEIVRRQLALPA 78 (140)
Q Consensus 58 ~~~ei~~~v~~ii~e~l~i~~ 78 (140)
.+.++...|.+.+.+.+|+++
T Consensus 16 qk~~l~~~lt~~l~~~lg~~~ 36 (64)
T 3abf_A 16 KKRELVRRLTEMASRLLGEPY 36 (64)
T ss_dssp HHHHHHHHHHHHHHHHTTCCG
T ss_pred HHHHHHHHHHHHHHHHhCCCc
Confidence 356788999999999999987
No 90
>1v31_A Hypothetical protein RAFL11-05-P19; SWI/SNF complex subunit, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: a.42.1.1
Probab=20.37 E-value=33 Score=22.29 Aligned_cols=56 Identities=7% Similarity=0.256 Sum_probs=44.2
Q ss_pred ccCChHHHHHHHHHHHHHHhCCCCC--CCCCCCCCcc-ccCCChhhHHHHHHHHHHHhC
Q 032446 55 SCSAKPETVQKVCEIVRRQLALPAE--TELTSESKFS-ALGADSLDTVEIVMSLEEEFG 110 (140)
Q Consensus 55 ~~m~~~ei~~~v~~ii~e~l~i~~~--~~I~~d~~l~-dLGlDSLd~vELv~~lEeefg 110 (140)
..+++.++...|.+.|++.--.++. ..|.-|..|. =+|.|++.+.++-..|...|-
T Consensus 25 ~~~sr~evvk~lW~YIK~n~Lqdp~~k~~I~cD~~L~~lfg~~~v~~~~~~klL~~Hl~ 83 (93)
T 1v31_A 25 EVETRPRIIAAIWHYVKARKLQNPNDPSFFNCDAALQKVFGEEKLKFTMVSQKISHHLS 83 (93)
T ss_dssp SEECSHHHHHHHHHHHHHTTCBCSSCSSEEECCSHHHHHSCSSEEETTTTHHHHHHHCB
T ss_pred CccCHHHHHHHHHHHHHHccCcCcccCceeehhHHHHHHhCCCcccHHHHHHHHHHhcC
Confidence 4579999999999999986433331 2577888888 479999999999999988764
Done!