BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032451
(140 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZS51|PMP22_ARATH Peroxisomal membrane protein PMP22 OS=Arabidopsis thaliana GN=PMP22
PE=1 SV=1
Length = 190
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 72/134 (53%), Positives = 101/134 (75%), Gaps = 1/134 (0%)
Query: 6 KEAWRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKISGVKKLQLKRLLLLMLFDFGYGV 65
K ++YL QLQ HPLRTKAITAGVL+G SD ++QK+SG++K+QL+R+LL ++F G+
Sbjct: 8 KTTLQRYLSQLQQHPLRTKAITAGVLSGVSDVVSQKLSGIQKIQLRRVLLKVIFAGGFLG 67
Query: 66 PFGHFLNKFLDAIFKG-RDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMK 124
P GHF + +LD FKG +D ++VAKKV+LEQL SP + LFM Y+G+V+E PW V +
Sbjct: 68 PAGHFFHTYLDKFFKGKKDTQTVAKKVILEQLTLSPLNHLLFMIYYGVVIERTPWTLVRE 127
Query: 125 KVRKDYPAVQFTSW 138
+++K YP VQ T+W
Sbjct: 128 RIKKTYPTVQLTAW 141
>sp|Q54FR4|PX24D_DICDI PXMP2/4 family protein 4 OS=Dictyostelium discoideum
GN=DDB_G0290631 PE=3 SV=1
Length = 185
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 72/130 (55%), Gaps = 5/130 (3%)
Query: 5 VKEAWRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKI----SGVKKLQLKRLLLLMLFD 60
+K A YL QL +P+ TKA+T+G L SD++ Q I KK KR + + +F
Sbjct: 8 LKLAQSHYLSQLHKYPVATKAVTSGFLYLISDSLVQGIELSRDKDKKYDFKRSMRMAVFG 67
Query: 61 FGYGVPFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWG 120
F P H+ K+LD F + + K+ ++Q++ SP NFLF + G ++EGK
Sbjct: 68 FAVTGPLFHYWFKYLDKHFPKKSYRHAFIKLTIDQVVCSPVFNFLFFSGMG-ILEGKSKD 126
Query: 121 SVMKKVRKDY 130
+++K++KD+
Sbjct: 127 DIVEKLKKDW 136
>sp|P19258|MPV17_MOUSE Protein Mpv17 OS=Mus musculus GN=Mpv17 PE=2 SV=1
Length = 176
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 4/133 (3%)
Query: 9 WRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKI---SGVKKLQLKRLLLLMLFDFGYGV 65
WR Y L HP + + +TAG L G D I+Q++ G+++ Q R L ++ G+
Sbjct: 4 WRAYQRALAAHPWKVQVLTAGSLMGVGDMISQQLVERRGLQQHQAGRTLTMVSLGCGFVG 63
Query: 66 PFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKK 125
P K LD + G KK+LL+Q F+P F+ G ++ G K
Sbjct: 64 PVVGGWYKVLDHLIPGTTKVHALKKMLLDQGGFAPCFLGCFLPLVG-ILNGMSAQDNWAK 122
Query: 126 VRKDYPAVQFTSW 138
+++DYP T++
Sbjct: 123 LKRDYPDALITNY 135
>sp|Q54GD8|PX24C_DICDI PXMP2/4 family protein 3 OS=Dictyostelium discoideum
GN=DDB_G0290223 PE=3 SV=1
Length = 184
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 75/131 (57%), Gaps = 6/131 (4%)
Query: 12 YLIQLQVHPLRTKAITAGVLAGCSDAIAQKISGVKKLQLKRLLLLMLFDFGYGVPFGHFL 71
Y+ +L+ P++TKA+T+ L+ S +AQK KK+ ++ ++ P H+
Sbjct: 17 YMKKLKSKPIQTKALTSATLSFISSVVAQKFIEKKKINWNAVVKFTVWGL-ISSPLVHYW 75
Query: 72 NKFLDAIFKG-RDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKKVRKD- 129
+ LD +FK +D K++++QL+F+P+IN F + +++GKP S++ K+ D
Sbjct: 76 HIILDRLFKNIKDKYQSWGKLIVDQLVFAPFINIAFYSVLA-ILDGKP-KSILFKLYFDL 133
Query: 130 YPAVQFTSWKV 140
+P ++ SWKV
Sbjct: 134 FPTLK-ASWKV 143
>sp|Q5BK62|MPV17_RAT Protein Mpv17 OS=Rattus norvegicus GN=Mpv17 PE=2 SV=1
Length = 176
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 4/133 (3%)
Query: 9 WRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKI---SGVKKLQLKRLLLLMLFDFGYGV 65
WR Y L HP + + +TAG L G D I+Q++ G+++ Q R L + G+
Sbjct: 4 WRAYQRALAAHPWKVQVLTAGSLMGLGDIISQQLVERRGLQQHQTGRTLTMASLGCGFVG 63
Query: 66 PFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKK 125
P + LD + G + KK+LL+Q F+P F+ G V+ G K
Sbjct: 64 PVVGGWYRVLDHLIPGTTKVNALKKMLLDQGGFAPCFLGCFLPLVG-VLNGMSAQDNWAK 122
Query: 126 VRKDYPAVQFTSW 138
+++DYP T++
Sbjct: 123 LKRDYPDALITNY 135
>sp|Q54XX9|PX24B_DICDI PXMP2/4 family protein 2 OS=Dictyostelium discoideum
GN=DDB_G0278529 PE=3 SV=1
Length = 193
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Query: 5 VKEAWRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKIS-------GVKKLQLKRLLLLM 57
+++ W YL L HPL TK+++ G L G D +AQ++ KL KR+ +
Sbjct: 1 MRKLWGLYLGLLDNHPLVTKSLSTGFLMGTGDILAQRLEHKFKDEKSQFKLDYKRVATMS 60
Query: 58 LFDFGYGVPFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSP 100
Y P H+ + LD + KG + KK+L++QL+F+P
Sbjct: 61 TVGIFYSGPMLHYWYRSLDIMVKGEGRSVIIKKMLIDQLLFAP 103
>sp|Q66GV0|MPV17_XENLA Protein Mpv17 OS=Xenopus laevis GN=mpv17 PE=2 SV=2
Length = 177
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 4/135 (2%)
Query: 9 WRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKI---SGVKKLQLKRLLLLMLFDFGYGV 65
WR Y L HP + + +TAG L G D I+Q++ G+K ++R + +M F +
Sbjct: 5 WRAYQRLLGAHPWKVQIVTAGSLVGVGDVISQQLLERKGLKGHSIERTVKMMGIGFCFVG 64
Query: 66 PFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKK 125
P K LD I G KK+LL+Q+ F+P F++ + G + K
Sbjct: 65 PVVGGWYKILDRIIPGSGKPVALKKMLLDQVAFAPCFLGCFLS-IASALNGLSGEQIWGK 123
Query: 126 VRKDYPAVQFTSWKV 140
+++DY T++ +
Sbjct: 124 LKRDYKDALITNYYI 138
>sp|Q07066|PXMP2_RAT Peroxisomal membrane protein 2 OS=Rattus norvegicus GN=Pxmp2 PE=1
SV=2
Length = 194
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 82/147 (55%), Gaps = 10/147 (6%)
Query: 1 MSNIVKEAWRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKISGVKK-----LQLKRLLL 55
+ ++ K A +YL+ L+ +P+ TKA+++G+L+ + +AQ I +K L++ LL
Sbjct: 14 LRSLPKRALAQYLLFLKFYPVVTKAVSSGILSALGNLLAQMIEKKQKKDSRSLEVSGLLR 73
Query: 56 LMLFDFGYGVPFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGL-VV 114
+++ P H+L F++ + K++LL++L F+P FL + +F + ++
Sbjct: 74 YLVYGLFVTGPLSHYLYLFMEYWVPPEVPWARVKRLLLDRLFFAP--TFLLLFFFVMNLL 131
Query: 115 EGKPWGSVMKKVRKDY-PAVQFTSWKV 140
EGK + K+R + PA+Q +W++
Sbjct: 132 EGKNISVFVAKMRSGFWPALQ-MNWRM 157
>sp|P39210|MPV17_HUMAN Protein Mpv17 OS=Homo sapiens GN=MPV17 PE=1 SV=1
Length = 176
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 4/133 (3%)
Query: 9 WRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKI---SGVKKLQLKRLLLLMLFDFGYGV 65
WR Y L HP + + +TAG L G D I+Q++ G+++ Q R L ++ G+
Sbjct: 4 WRAYQRALAAHPWKVQVLTAGSLMGLGDIISQQLVERRGLQEHQRGRTLTMVSLGCGFVG 63
Query: 66 PFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKK 125
P K LD G KK+LL+Q F+P F+ G + G K
Sbjct: 64 PVVGGWYKVLDRFIPGTTKVDALKKMLLDQGGFAPCFLGCFLPLVG-ALNGLSAQDNWAK 122
Query: 126 VRKDYPAVQFTSW 138
+++DYP T++
Sbjct: 123 LQRDYPDALITNY 135
>sp|Q2KIN6|MPV17_BOVIN Protein Mpv17 OS=Bos taurus GN=MPV17 PE=2 SV=1
Length = 176
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 4/133 (3%)
Query: 9 WRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKI---SGVKKLQLKRLLLLMLFDFGYGV 65
WR Y L HP + + +TAG L G D I+Q++ G++ Q R L + G+
Sbjct: 4 WRAYQRALTAHPWKVQVLTAGSLMGLGDVISQQLVERRGLQAHQAGRTLTMASLGCGFVG 63
Query: 66 PFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKK 125
P + LD + G KK+LL+Q F+P F+ G + G K
Sbjct: 64 PVVGGWYRVLDRLIPGTTKVDALKKMLLDQGGFAPCFLGCFLPLVG-TLNGLSAQDNWAK 122
Query: 126 VRKDYPAVQFTSW 138
+++D+P T++
Sbjct: 123 LQRDFPDALITNY 135
>sp|Q5TZ51|MPV17_DANRE Protein Mpv17 OS=Danio rerio GN=mpv17 PE=2 SV=1
Length = 177
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 60/129 (46%), Gaps = 12/129 (9%)
Query: 9 WRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKI---SGVKKLQLKRLLLLMLFDFGYGV 65
WR Y + HP + + ITAG L G D I+Q++ G+ +R +M F +
Sbjct: 5 WRSYQALMAKHPWKVQIITAGSLVGVGDVISQQLIERRGLANHNARRTAKMMSIGFFFVG 64
Query: 66 PFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFM----TYFGLVVEGKPWGS 121
P K LD + G + KK+L++Q+ F+P F+ T GL VE
Sbjct: 65 PVVGGWYKVLDKLVTGGTKSAALKKMLVDQVGFAPCFLGAFLGITGTLNGLTVEEN---- 120
Query: 122 VMKKVRKDY 130
+ K+++DY
Sbjct: 121 -VAKLQRDY 128
>sp|Q2KIY1|PXMP2_BOVIN Peroxisomal membrane protein 2 OS=Bos taurus GN=PXMP2 PE=2 SV=3
Length = 196
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 79/151 (52%), Gaps = 16/151 (10%)
Query: 1 MSNIVKEAWRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKI-------SGVKKLQLKRL 53
+ + + A +YL L+++P+ TKA T+G+L+ + +AQ I + +KL +
Sbjct: 14 LGPLPRRALSQYLRLLRLYPVLTKAATSGILSALGNFLAQLIEKKQKKENCSQKLDVSGP 73
Query: 54 LLLMLFDFGYGVPFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLV 113
L ++ F + P GHF ++ + K++LL++L+F+P F++ F LV
Sbjct: 74 LRYAIYGFFFTGPLGHFFYLLMERWIPSEVPLAGIKRLLLDRLLFAP----AFLSLFFLV 129
Query: 114 ---VEGKPWGSVMKKVRKDY-PAVQFTSWKV 140
+EG+ + K++ + PA++ +W+V
Sbjct: 130 MNFLEGQDTAAFAAKMKSGFWPALR-MNWRV 159
>sp|Q54ZX5|PX24A_DICDI PXMP2/4 family protein 1 OS=Dictyostelium discoideum
GN=DDB_G0277335 PE=3 SV=1
Length = 202
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 61/133 (45%), Gaps = 3/133 (2%)
Query: 10 RKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKISGVKKLQLKRLLLLMLFDFGYGVPFGH 69
Y LQ P+ TK++T V+ D +AQKI + KR L++ VP H
Sbjct: 11 NSYKKSLQNRPVITKSLTGTVVFFLGDTLAQKIEN-RGYDPKRTLMMCTVGTFIVVPQIH 69
Query: 70 FLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVM--KKVR 127
F KFLD F KV+++QL F P++ MT L +G + + K++
Sbjct: 70 FWFKFLDKTFTKPGWAGAIPKVVVDQLTFGPYLFVCNMTSVQLFHQGFNFDTHQWKDKMK 129
Query: 128 KDYPAVQFTSWKV 140
KD+ V +W +
Sbjct: 130 KDFFPVLQKAWMI 142
>sp|Q7SCY7|SYM1_NEUCR Protein sym-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A
/ CBS 708.71 / DSM 1257 / FGSC 987) GN=sym-1 PE=3 SV=2
Length = 172
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 9/134 (6%)
Query: 12 YLIQLQVHPLRTKAITAGVLAGCSDAIAQKI---SGVKKLQLKRLLLLMLFDFGYGVPFG 68
Y QL PL T+A+T +L G D AQ++ G+ L R ++L+ P
Sbjct: 5 YKAQLAARPLLTQAVTTSILFGVGDVAAQQLVDRRGLSNHDLTRTGRMVLYGGAVFGPAA 64
Query: 69 HFLNKFLD--AIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKKV 126
+FL + G NK++ +V +Q +F+P +F+ V+EG V +K+
Sbjct: 65 TTWFRFLQKRVVVPGSTNKTILARVAADQGLFAPTFIGIFLGSMA-VLEGT---DVKEKL 120
Query: 127 RKDYPAVQFTSWKV 140
+K+Y T+W V
Sbjct: 121 QKNYWEALSTNWMV 134
>sp|P42925|PXMP2_MOUSE Peroxisomal membrane protein 2 OS=Mus musculus GN=Pxmp2 PE=2 SV=2
Length = 194
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 68/125 (54%), Gaps = 10/125 (8%)
Query: 23 TKAITAGVLAGCSDAIAQKISGVKK-----LQLKRLLLLMLFDFGYGVPFGHFLNKFLDA 77
TKA+++G+L+ + +AQ I ++ L++ LL +++ P H+L F++
Sbjct: 36 TKAVSSGILSALGNLLAQTIEKKQRKDSRLLEVSGLLRYLVYGLFVTGPLSHYLYLFMEY 95
Query: 78 IFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGL-VVEGKPWGSVMKKVRKDY-PAVQF 135
+ K++LL++L F+P FL + +F + ++EGK + K+R + PA+Q
Sbjct: 96 SVPPEVPWASVKRLLLDRLFFAP--TFLLLFFFVMNLLEGKNVSVFVAKMRSGFWPALQ- 152
Query: 136 TSWKV 140
+W++
Sbjct: 153 MNWRM 157
>sp|Q6DIY8|M17L2_XENTR Mpv17-like protein 2 OS=Xenopus tropicalis GN=mpv17l2 PE=2 SV=1
Length = 222
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 23 TKAITAGVLAGCSDAIAQKISGVKKLQLKRLLLLMLFDFGYGVPFG---HFLNKFLDAIF 79
T ++ G+L G D+I Q + + KR L F G G HF +LD F
Sbjct: 28 TNTVSCGLLLGIGDSIQQSREVRRDPERKRDWLRTGRMFAIGCSMGPLMHFWYSWLDRSF 87
Query: 80 KGRDNKSVAKKVLLEQLIFSP 100
GR V +KVL++QL+ SP
Sbjct: 88 PGRGITVVMRKVLIDQLVASP 108
>sp|O14142|SYM1_SCHPO Protein sym1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=sym1 PE=3 SV=1
Length = 206
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 61/129 (47%), Gaps = 26/129 (20%)
Query: 11 KYLIQLQVHPLRTKAITAGVLAGCSDAIAQKIS----------GVKKLQL---------K 51
+Y + P+ T +TAG L G SDA+AQ ++ G+ ++L K
Sbjct: 8 RYNALFEKAPIMTMCLTAGTLGGISDAVAQGLTIYQTNKNAMIGLDGVRLNTHPEIPSIK 67
Query: 52 RLLLLMLFDFGYGVPFGHFLNKFLDAIF---KGRDNKSVAKKVLLEQLIFSPWINFLFMT 108
R+L + F F PF + L A F KG N V K+VLL+Q +F+P+ F +
Sbjct: 68 RVLQFVTFGFAIS-PFQFRWLRLLSAKFPIEKGAIN--VVKRVLLDQAVFAPFGTAFFFS 124
Query: 109 YFGLVVEGK 117
+ L EGK
Sbjct: 125 WMTL-AEGK 132
>sp|Q9NR77|PXMP2_HUMAN Peroxisomal membrane protein 2 OS=Homo sapiens GN=PXMP2 PE=1 SV=3
Length = 195
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 76/147 (51%), Gaps = 9/147 (6%)
Query: 1 MSNIVKEAWRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKISGVKKLQLKRLLLL---- 56
+ + + A +YL+ L+++P+ TKA T+G+L+ + +AQ I +K + R L +
Sbjct: 14 LGALPRRALAQYLLFLRLYPVLTKAATSGILSALGNFLAQMIEKKRKKENSRSLDVGGPL 73
Query: 57 --MLFDFGYGVPFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVV 114
++ F + P HF F++ + +++LL++L+F+P LF +
Sbjct: 74 RYAVYGFFFTGPLSHFFYFFMEHWIPPEVPLAGLRRLLLDRLVFAPAFLMLFFLIMNF-L 132
Query: 115 EGKPWGSVMKKVRKDY-PAVQFTSWKV 140
EGK + K+R + PA++ +W+V
Sbjct: 133 EGKDASAFAAKMRGGFWPALR-MNWRV 158
>sp|Q7YWV6|MPV17_CAEEL Mpv17-like protein OS=Caenorhabditis elegans GN=T18D3.9 PE=3 SV=1
Length = 181
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 15 QLQVHPLRTKAITAGVLAGCSDAIAQKISGVKKLQLKRLLLLMLFDFGYGVPFGHFLNKF 74
+L +PL T+ AG ++G D +AQ +S ++ R + P +
Sbjct: 10 RLATNPLSTQMCIAGTISGSGDCLAQYLSHNQEWDRWRTARFSFLSSCFMAPSLFIWFRL 69
Query: 75 LDAIFKGRDNKS--VAKKVLLEQLIFSPWIN 103
L+ + KG +NKS + KK+ ++QL FSP N
Sbjct: 70 LEKV-KG-NNKSLLLVKKLCIDQLCFSPCFN 98
>sp|Q754F0|SYM1_ASHGO Protein SYM1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 /
FGSC 9923 / NRRL Y-1056) GN=SYM1 PE=3 SV=1
Length = 182
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 59/136 (43%), Gaps = 9/136 (6%)
Query: 12 YLIQLQVHPLRTKAITAGVLAGCSDAIAQKISGVKKLQLKRLLLLMLFDFGYGVPF---G 68
Y LQ HP RT A+T G L G D +AQ + L F +G V F G
Sbjct: 8 YKASLQSHPKRTNALTTGFLFGLGDIVAQTQFPEPGASYDPMRTLRPFLYG-AVLFSLVG 66
Query: 69 HFLNKFLDAIFKGRDNKS----VAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMK 124
+FL + GR ++ V +V +QLIF+P L+ T L +EG V
Sbjct: 67 DKWYRFLSTVRLGRLPQAHWANVLARVACDQLIFAPIGVPLYYTAMAL-MEGGSLEDVRI 125
Query: 125 KVRKDYPAVQFTSWKV 140
++ + + + +W V
Sbjct: 126 RLSEKWWSTLLANWIV 141
>sp|Q68F62|MP17L_XENLA Mpv17-like protein OS=Xenopus laevis GN=mpv17l PE=2 SV=1
Length = 203
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Query: 11 KYLIQL-QVHPLRTKAITAGVLAGCSDAIAQKIS--GVKKLQLKRLLLLMLFDFGYGVPF 67
+ LIQ + HP T G L +D + QK+S + + K+ + L F + F
Sbjct: 2 RILIQFTKRHPWLTNVTIYGSLFASADIVQQKLSKSPTEPIDFKQTAKVGLVGFCFHANF 61
Query: 68 GHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSP 100
F +F++ F G +V +KV +QL+ +P
Sbjct: 62 NFFWLRFIERTFPGSAPLNVIRKVACDQLMAAP 94
>sp|Q6DGV7|M17L2_DANRE Mpv17-like protein 2 OS=Danio rerio GN=mpv17l2 PE=2 SV=1
Length = 199
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 66 PFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKK 125
PF H+ ++LD F G +V KKVL++QL+ SP + + G+ +EG + ++
Sbjct: 75 PFMHYWYQWLDKYFIGNGINNVCKKVLVDQLVASPTLGAWYFLGMGM-MEGHTFIEAQQE 133
Query: 126 VRKDYPAVQFTSWKV 140
R + W V
Sbjct: 134 FRDKFWEFYKADWCV 148
>sp|Q4WDZ0|SYM1_ASPFU Protein sym1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293
/ CBS 101355 / FGSC A1100) GN=sym1 PE=3 SV=1
Length = 196
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 75/154 (48%), Gaps = 31/154 (20%)
Query: 9 WRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKI---SGVKKLQLKRLLLLMLF------ 59
+++ LIQ PL T+++T L D++AQ+ G+ + + R + +
Sbjct: 5 YQRSLIQ---RPLLTQSLTTACLFAVGDSLAQQAVEKRGIAQHDVARTGRMAFYGGGNVQ 61
Query: 60 DFGYGVP-------FGHFLNKFLDAIFKGRDN-----KSVAKKVLLEQLIFSPWINFLFM 107
F Y +P FG K+ + + R N ++V +V +QL+F+P + +F+
Sbjct: 62 PFPYKLPLLTVVAVFGPLATKWFQ-VLQRRINLPSAQRTVVGRVAADQLLFAPTMIGVFL 120
Query: 108 TYFGLVVEGKPWGSVMKKVRKDY-PAVQFTSWKV 140
+ V+EG GS+ +K+ + Y PA++ +W V
Sbjct: 121 SSMS-VLEG---GSLSEKLERSYWPALK-ANWTV 149
>sp|Q2QL34|MP17L_HUMAN Mpv17-like protein OS=Homo sapiens GN=MPV17L PE=1 SV=1
Length = 196
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 19 HPLRTKAITAGVLAGCSDAIAQKISGVKK--LQLKRLLLLMLFDFGYGVPFGHFLNKFLD 76
HP T + G L DA+ Q++ G + Q +R+ L++ + F + + L+
Sbjct: 15 HPWPTNVLLYGSLVSAGDALQQRLQGREANWRQTRRVATLVV---TFHANFNYVWLRLLE 71
Query: 77 AIFKGRDNKSVAKKVLLEQLIFSP 100
GR ++ K+L +Q++ +P
Sbjct: 72 RALPGRAPHALLAKLLCDQVVGAP 95
>sp|Q833Z1|PUR5_ENTFA Phosphoribosylformylglycinamidine cyclo-ligase OS=Enterococcus
faecalis (strain ATCC 700802 / V583) GN=purM PE=3 SV=1
Length = 343
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 20/33 (60%)
Query: 12 YLIQLQVHPLRTKAITAGVLAGCSDAIAQKISG 44
YL V+P + +AI AGV AGC +A A I G
Sbjct: 105 YLALGTVNPAKVEAIVAGVAAGCCEANAALIGG 137
>sp|Q6BMY0|SYM1_DEBHA Protein SYM1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767
/ JCM 1990 / NBRC 0083 / IGC 2968) GN=SYM1 PE=3 SV=1
Length = 206
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 11/105 (10%)
Query: 9 WRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKI-SGVKKLQLKRLLLLMLFDFGYGVPF 67
++KY + PL T IT G L G D +AQ + K KR L + P
Sbjct: 5 YQKYSQLIAKRPLITNIITTGFLFGSGDYLAQTLYPSSSKYDYKRTLRATFYGSIIFAPI 64
Query: 68 G----HFLNKFLDAIFKGRDNKSVAK------KVLLEQLIFSPWI 102
G L+K K + + +V+K KV ++QL+F+P+I
Sbjct: 65 GDKWYRLLHKINFPFPKTKVSPTVSKVLNTLTKVGVDQLVFAPFI 109
>sp|C5DD45|AIM6_LACTC Altered inheritance of mitochondria protein 6 OS=Lachancea
thermotolerans (strain ATCC 56472 / CBS 6340 / NRRL
Y-8284) GN=AIM6 PE=3 SV=1
Length = 429
Score = 32.7 bits (73), Expect = 0.70, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 7/75 (9%)
Query: 60 DFGYGVPFGH---FLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEG 116
D YGV + LN ++D FK D S LL L P I+ ++TYF + E
Sbjct: 227 DHKYGVFYSSPETTLNLYID--FKSPD--STQTYALLMDLYLKPLIDMGYLTYFDMDEEK 282
Query: 117 KPWGSVMKKVRKDYP 131
W V + DYP
Sbjct: 283 VVWNPVTVILTGDYP 297
>sp|Q567V2|M17L2_HUMAN Mpv17-like protein 2 OS=Homo sapiens GN=MPV17L2 PE=1 SV=2
Length = 206
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 15/86 (17%)
Query: 66 PFGHFLNKFLDAIFKG---RDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSV 122
PF H+ LD +F R +V KKVL++QL+ SP + + G +EG+ G
Sbjct: 74 PFLHYWYLSLDRLFPASGLRGFPNVLKKVLVDQLVASPLLGVWYFLGLG-CLEGQTVGES 132
Query: 123 MKKVRKDY-----------PAVQFTS 137
+++R+ + PA QF +
Sbjct: 133 CQELREKFWEFYKADWCVWPAAQFVN 158
>sp|Q4P9K6|SYM1_USTMA Protein SYM1 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=SYM1
PE=3 SV=1
Length = 199
Score = 32.3 bits (72), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 52/118 (44%), Gaps = 4/118 (3%)
Query: 24 KAITAGVLAGCSDAIAQKISGVK--KLQLKRLLLLMLFDFGYGVPFGH-FLNKFLDAIFK 80
+ +T GVL D IAQ++ + + L R L L+ P + + L+ +
Sbjct: 18 QCLTGGVLFATGDTIAQQLVEKRGSRHDLARTFRLSLYGGCVFSPLASIWFGRVLERVRF 77
Query: 81 GRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKKVRKDYPAVQFTSW 138
++A KV L+Q I SP LF ++ G P + K + +P ++ T+W
Sbjct: 78 SSKAANIATKVALDQAIASPAFVALFFGATTIMEGGSPDQAKNKIIHNWWPTLK-TAW 134
>sp|Q99MS3|MP17L_MOUSE Mpv17-like protein OS=Mus musculus GN=Mpv17l PE=1 SV=2
Length = 194
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 5/94 (5%)
Query: 9 WRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKISG--VKKLQLKRLLLLMLFDFGYGVP 66
WR + + +P T + L DA+ Q++ G Q +R+ L + G
Sbjct: 5 WRAFPQAARRYPWPTNVLLYAGLFSAGDALQQRLRGGPADWRQTRRVATLAVTFHGN--- 61
Query: 67 FGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSP 100
F + + L+ GR ++V KVL +Q + P
Sbjct: 62 FNYVWLRLLERALPGRAPRTVLAKVLCDQTVGGP 95
>sp|P87515|POLN_BFV Non-structural polyprotein OS=Barmah forest virus PE=2 SV=2
Length = 2410
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Query: 59 FDFGYGVPFGHFLNKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFL 105
F FG + G FL F++ I N +A +VL +QL SPW F+
Sbjct: 2221 FKFGAMMKSGMFLTLFVNTIL----NVVIACRVLEDQLAQSPWPAFI 2263
>sp|P28595|PYRG_AZOBR CTP synthase OS=Azospirillum brasilense GN=pyrG PE=3 SV=1
Length = 544
Score = 31.2 bits (69), Expect = 2.2, Method: Composition-based stats.
Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 4/26 (15%)
Query: 107 MTYFGLVVEGKP----WGSVMKKVRK 128
+ YFGL EGKP W S++++VRK
Sbjct: 260 LAYFGLPTEGKPDLSRWTSIVERVRK 285
>sp|A5D787|M17L2_BOVIN Mpv17-like protein 2 OS=Bos taurus GN=MPV17L2 PE=2 SV=1
Length = 218
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 9/117 (7%)
Query: 21 LRTKAITAGVLAGCSDAIAQ----KISGVKKLQLKRLLLLMLFDFGYGVPFGHFLNKFLD 76
L T + GVL D Q + +K +R + + G PF H+ +LD
Sbjct: 26 LVTNTLGCGVLMAAGDGARQTWEIRARPGQKFDPRRSVSMFAVGCSMG-PFLHYWYLWLD 84
Query: 77 AIFKGRDNK---SVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKKVRKDY 130
+F +V KKVL++QL+ SP + + G +EG+ +++R +
Sbjct: 85 RLFPASGFPGLPNVLKKVLIDQLVASPMLGVWYFLGLG-CLEGQTLDKSCQELRDKF 140
>sp|Q59Q43|SYM1_CANAL Protein SYM1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876)
GN=SYM1 PE=3 SV=1
Length = 195
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 17/115 (14%)
Query: 5 VKEAWRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKISGV--------KKLQLKRLLLL 56
+K + +Y L PL T IT G+L G DA+AQ + R L
Sbjct: 1 MKYIFNRYNALLLRRPLITNMITTGLLVGGGDALAQFFFPNNDNNNLEQQPFDYLRNLRA 60
Query: 57 MLFDFGYGVPFGHFLNKFLDAIFKGRDNK---------SVAKKVLLEQLIFSPWI 102
+++ P G KFL+ N S +V+++QL+F+P+I
Sbjct: 61 IIYGSLIFAPIGDKWYKFLNTKVVWTRNAQKPQYQRSMSTLLRVMVDQLVFAPFI 115
>sp|Q63DZ4|NORM_BACCZ Probable multidrug resistance protein NorM OS=Bacillus cereus
(strain ZK / E33L) GN=norM PE=3 SV=1
Length = 453
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Query: 6 KEAWRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKISGV----KKLQLKRLLLLMLFDF 61
E Y +QVH L + + +L SDAIA + G K + + ++ L+ + +
Sbjct: 341 NEIASIYTTDIQVHHLAKEFLIFAILFQISDAIATPVQGALRGYKDVNVALIMTLIAY-W 399
Query: 62 GYGVPFGHFLNKFLDAIFKG 81
G+P G+ L + D KG
Sbjct: 400 VIGLPLGYILATYTDWAAKG 419
>sp|Q73BB8|NORM_BACC1 Probable multidrug resistance protein NorM OS=Bacillus cereus
(strain ATCC 10987) GN=norM PE=3 SV=1
Length = 454
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 7 EAWRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKISGV----KKLQLKRLLLLMLFDFG 62
E Y +QVH L + + +L SDAIA + G K + + ++ L+ + +
Sbjct: 342 EIASIYTTDIQVHHLAKEFLIFAILFQISDAIATPVQGALRGYKDVNVSLIMTLIAY-WV 400
Query: 63 YGVPFGHFLNKFLDAIFKG 81
G+P G+ L + D KG
Sbjct: 401 IGLPLGYILATYTDWAAKG 419
>sp|Q81T85|NORM_BACAN Probable multidrug resistance protein NorM OS=Bacillus anthracis
GN=norM PE=3 SV=1
Length = 453
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 7 EAWRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKISGV----KKLQLKRLLLLMLFDFG 62
E Y +QVH L + + +L SDAIA + G K + + ++ L+ + +
Sbjct: 342 EIASIYTTDIQVHHLAKEFLIFAILFQISDAIATPVQGALRGYKDVNVALIMTLIAY-WV 400
Query: 63 YGVPFGHFLNKFLDAIFKG 81
G+P G+ L + D KG
Sbjct: 401 IGLPLGYILATYTDWAAKG 419
>sp|Q6HLG9|NORM_BACHK Probable multidrug resistance protein NorM OS=Bacillus
thuringiensis subsp. konkukian (strain 97-27) GN=norM
PE=3 SV=1
Length = 453
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 7 EAWRKYLIQLQVHPLRTKAITAGVLAGCSDAIAQKISGV----KKLQLKRLLLLMLFDFG 62
E Y +QVH L + + +L SDAIA + G K + + ++ L+ + +
Sbjct: 342 EIASIYTTDIQVHHLAKEFLIFAILFQISDAIATPVQGALRGYKDVNVALIMTLIAY-WV 400
Query: 63 YGVPFGHFLNKFLDAIFKG 81
G+P G+ L + D KG
Sbjct: 401 IGLPLGYILATYTDWAAKG 419
>sp|E3Q4R4|M28P1_COLGM Probable zinc metalloprotease GLRG_01223 OS=Colletotrichum
graminicola (strain M1.001 / M2 / FGSC 10212)
GN=GLRG_01223 PE=3 SV=1
Length = 1034
Score = 29.6 bits (65), Expect = 5.9, Method: Composition-based stats.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 16 LQVHPLRTKAITAGVLAGCSDAIAQKI 42
+ V P++TKA+ AGVLA SD+ A +
Sbjct: 947 VDVEPIKTKAVPAGVLAKSSDSDAGAV 973
>sp|Q6CAW5|SYM1_YARLI Protein SYM1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150)
GN=SYM1 PE=3 SV=1
Length = 202
Score = 29.3 bits (64), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 49/119 (41%), Gaps = 7/119 (5%)
Query: 12 YLIQLQVHPLRTKAITAGVLAGCSDAIAQKISGVKKLQLKRLLLLMLFDFGYGVPFGHFL 71
Y+ LQ +P R + L D ++Q+ K + R + Y F +
Sbjct: 4 YVRLLQKYPYRMAVTSTSSLFMIGDCVSQRYFSDKPYEPMRTARAGI----YACAFAPAM 59
Query: 72 NKFLDAIFKGRDNKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPWGSVMKKVRKDY 130
+ F G+ V KV ++Q +F+P + + GL +EGK ++ + ++ Y
Sbjct: 60 TAWFR--FLGQQQLPVIAKVAIDQAVFAPSSIGYYFSVMGL-LEGKSPDTIWQSLKNQY 115
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.142 0.439
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,846,931
Number of Sequences: 539616
Number of extensions: 1806052
Number of successful extensions: 4637
Number of sequences better than 100.0: 43
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 4594
Number of HSP's gapped (non-prelim): 43
length of query: 140
length of database: 191,569,459
effective HSP length: 105
effective length of query: 35
effective length of database: 134,909,779
effective search space: 4721842265
effective search space used: 4721842265
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)