Query 032451
Match_columns 140
No_of_seqs 160 out of 1042
Neff 7.9
Searched_HMMs 13730
Date Mon Mar 25 23:29:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032451.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/032451hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2vqca1 a.4.5.78 (A:4-73) F-11 70.1 0.91 6.6E-05 25.0 1.4 26 33-58 22-48 (70)
2 d1xrda1 f.3.1.1 (A:1-52) Light 60.6 3.8 0.00027 21.7 2.7 30 47-76 7-42 (52)
3 d2v9va1 a.4.5.35 (A:377-437) C 34.4 12 0.00084 19.6 1.9 21 36-56 5-26 (61)
4 d3ct6a1 c.54.1.2 (A:1-123) PTS 19.6 52 0.0038 19.9 3.4 32 97-129 88-119 (123)
5 d1h2vc1 a.118.1.14 (C:29-290) 19.5 1.1E+02 0.008 20.6 5.6 51 84-135 36-89 (262)
6 d2fnaa1 a.4.5.11 (A:284-356) H 17.3 68 0.005 17.7 3.2 24 106-129 8-31 (73)
7 d1ppjg_ f.23.13.1 (G:) Ubiquin 16.1 92 0.0067 17.2 3.7 29 82-110 32-60 (75)
8 d2g7la2 a.121.1.1 (A:87-230) P 14.9 72 0.0052 18.9 3.3 58 5-62 7-74 (144)
9 d1k3ka_ f.1.4.1 (A:) Bcl-2 hom 12.3 1.6E+02 0.012 18.1 5.5 28 34-62 69-96 (146)
10 d1khda1 a.46.2.1 (A:12-80) Ant 12.1 1.1E+02 0.0078 16.0 5.5 53 71-125 2-57 (69)
No 1
>d2vqca1 a.4.5.78 (A:4-73) F-112 {Sulfolobus virus-like particle SSV1 [TaxId: 244589]}
Probab=70.05 E-value=0.91 Score=25.00 Aligned_cols=26 Identities=23% Similarity=0.135 Sum_probs=19.9
Q ss_pred HHHHHHHHhh-hCCCchhHHHHHHHHH
Q 032451 33 GCSDAIAQKI-SGVKKLQLKRLLLLML 58 (140)
Q Consensus 33 ~~gD~laQ~~-~~~~~~D~~R~~~~~~ 58 (140)
.+-|++||.- ..+..++..|++++..
T Consensus 22 ~ledilaqfeis~~~ayniqr~l~~ic 48 (70)
T d2vqca1 22 TLEDILAQFEISVPSAYNIQRALKAIC 48 (70)
T ss_dssp CHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHheeccchHhHHHHHHHHHH
Confidence 3679999983 3346799999999864
No 2
>d1xrda1 f.3.1.1 (A:1-52) Light-harvesting complex subunits {Rhodospirillum rubrum [TaxId: 1085]}
Probab=60.63 E-value=3.8 Score=21.74 Aligned_cols=30 Identities=13% Similarity=0.093 Sum_probs=22.0
Q ss_pred chhHHHHHHHHHHhhhcccchhhHH------HHHHH
Q 032451 47 KLQLKRLLLLMLFDFGYGVPFGHFL------NKFLD 76 (140)
Q Consensus 47 ~~D~~R~~~~~~~G~~~~gP~~~~w------y~~L~ 76 (140)
-+|++|++.-.....+.-+-..|+- |+|||
T Consensus 7 ~fDPRr~lva~~~fL~~LAl~IHfiLLSt~rfNWle 42 (52)
T d1xrda1 7 LFDPRQALVGLATFLFVLALLIHFILLSTERFNWLE 42 (52)
T ss_dssp TSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EecHHHHHHHHHHHHHHHHHHHHHHHhccCcccccc
Confidence 4799999887777666677777765 56666
No 3
>d2v9va1 a.4.5.35 (A:377-437) C-terminal fragment of elongation factor SelB {Moorella thermoacetica [TaxId: 1525]}
Probab=34.41 E-value=12 Score=19.58 Aligned_cols=21 Identities=19% Similarity=0.107 Sum_probs=15.2
Q ss_pred HHHHHhh-hCCCchhHHHHHHH
Q 032451 36 DAIAQKI-SGVKKLQLKRLLLL 56 (140)
Q Consensus 36 D~laQ~~-~~~~~~D~~R~~~~ 56 (140)
.++||.+ |.++.+||.....-
T Consensus 5 kilaqiiqehregldwqeaatr 26 (61)
T d2v9va1 5 KILAQIIQEHREGLDWQEAATR 26 (61)
T ss_dssp HHHHHHHHHCSSCEEHHHHHHH
T ss_pred HHHHHHHHHHHccCcHHHHHHH
Confidence 4789998 56678888865543
No 4
>d3ct6a1 c.54.1.2 (A:1-123) PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit DhaM {Lactococcus lactis [TaxId: 1358]}
Probab=19.56 E-value=52 Score=19.91 Aligned_cols=32 Identities=13% Similarity=0.165 Sum_probs=27.5
Q ss_pred hHHHHHHHHHHHHHHHHhcCCChHHHHHHHHhh
Q 032451 97 IFSPWINFLFMTYFGLVVEGKPWGSVMKKVRKD 129 (140)
Q Consensus 97 i~~P~~~~~f~~~~~~~leg~~~~~~~~~~k~~ 129 (140)
+-+|+.-..+-.... ...|.+++++.+++++-
T Consensus 88 i~~p~tegal~Aa~~-a~~g~~leeI~~~~~~~ 119 (123)
T d3ct6a1 88 FNVPLIEGAYTASAL-LEAGATFEAIKEQLEKM 119 (123)
T ss_dssp CCSCHHHHHHHHHHH-HHTTCCHHHHHHHHGGG
T ss_pred EcCchHHHHHHHHHH-HhCCCCHHHHHHHHHHh
Confidence 567888888888888 88999999999999874
No 5
>d1h2vc1 a.118.1.14 (C:29-290) CBP80, 80KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.47 E-value=1.1e+02 Score=20.59 Aligned_cols=51 Identities=14% Similarity=0.199 Sum_probs=35.8
Q ss_pred hHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCh---HHHHHHHHhhCHHHHH
Q 032451 84 NKSVAKKVLLEQLIFSPWINFLFMTYFGLVVEGKPW---GSVMKKVRKDYPAVQF 135 (140)
Q Consensus 84 ~~~~~~Kvl~Dq~i~~P~~~~~f~~~~~~~leg~~~---~~~~~~~k~~~~~~~~ 135 (140)
.+..+.+.+++...-.|..+..|-+..+ +++-+.. +++.+++.+.+-..+.
T Consensus 36 ~~~~il~~l~~~~~~~P~k~~~yA~Lv~-llN~~~~e~g~~~l~~~~~~f~~~l~ 89 (262)
T d1h2vc1 36 YKSKILRLLCTVARLLPEKLTIYTTLVG-LLNARNYNFGGEFVEAMIRQLKESLK 89 (262)
T ss_dssp HHHHHHHHHHHHHHHCGGGHHHHHHHHH-HHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcchHHHHHHHHH-HHccCcHHHHHHHHHHHHHHHHHHHH
Confidence 4577888888888889998888888888 8877663 2455555555544444
No 6
>d2fnaa1 a.4.5.11 (A:284-356) Hypothetical protein SSO1545, C-terminal domain {Sulfolobus solfataricus [TaxId: 2287]}
Probab=17.32 E-value=68 Score=17.73 Aligned_cols=24 Identities=8% Similarity=0.383 Sum_probs=16.3
Q ss_pred HHHHHHHHhcCCChHHHHHHHHhh
Q 032451 106 FMTYFGLVVEGKPWGSVMKKVRKD 129 (140)
Q Consensus 106 f~~~~~~~leg~~~~~~~~~~k~~ 129 (140)
|..++.++.+|.+|+++++-++.+
T Consensus 8 Y~~ILkaia~G~rWs~IK~yle~~ 31 (73)
T d2fnaa1 8 YLNIMRTLSKCGKWSDVKRALELE 31 (73)
T ss_dssp HHHHHHHHTTCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHccCcHHHHHHHHHHH
Confidence 444555477888888888877543
No 7
>d1ppjg_ f.23.13.1 (G:) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) {Cow (Bos taurus) [TaxId: 9913]}
Probab=16.10 E-value=92 Score=17.23 Aligned_cols=29 Identities=14% Similarity=0.197 Sum_probs=21.7
Q ss_pred CChHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 032451 82 RDNKSVAKKVLLEQLIFSPWINFLFMTYF 110 (140)
Q Consensus 82 ~~~~~~~~Kvl~Dq~i~~P~~~~~f~~~~ 110 (140)
+...++++++--+-+..+|-++..|+++.
T Consensus 32 ~gi~N~~RR~~~~~l~v~PPfi~~Y~iy~ 60 (75)
T d1ppjg_ 32 KGIPNVLRRTRACILRVAPPFVAFYLVYT 60 (75)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcccHHHHHhHHhceEEcCHHHHHHHHHH
Confidence 34668888888666677888888887765
No 8
>d2g7la2 a.121.1.1 (A:87-230) Putative transcriptional regulator SCO7704 {Streptomyces coelicolor [TaxId: 1902]}
Probab=14.92 E-value=72 Score=18.94 Aligned_cols=58 Identities=10% Similarity=0.065 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHhhCchHHHHHHHH-----HHHHHHHHHHHhhhC-----CCchhHHHHHHHHHHhhh
Q 032451 5 VKEAWRKYLIQLQVHPLRTKAITAG-----VLAGCSDAIAQKISG-----VKKLQLKRLLLLMLFDFG 62 (140)
Q Consensus 5 ~~~~~~~Y~~~l~~~Pl~t~~~t~~-----~l~~~gD~laQ~~~~-----~~~~D~~R~~~~~~~G~~ 62 (140)
++.+...|.+.+.+||-+...+.+. -....-|-+.+.+.+ .+.....+++-..+.|+.
T Consensus 7 Lr~~a~~~r~~l~~HP~~~~l~~~~~~~~p~~l~~~e~~l~~L~~aG~~~~~a~~~~~~l~~~v~g~~ 74 (144)
T d2g7la2 7 LRAVLTSYTLVLFAHPQLARSALVARPSGENYLRLVERVLELLARSGAPGAQVAWGVDKLLQDATATA 74 (144)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHSCCCSHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCcCHHHHHhcCCCCcccHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH
Confidence 5678889999999999888876543 223455666666643 122344444455555543
No 9
>d1k3ka_ f.1.4.1 (A:) Bcl-2 homolog {Kaposi's sarcoma-associated herpesvirus [TaxId: 37296]}
Probab=12.30 E-value=1.6e+02 Score=18.12 Aligned_cols=28 Identities=14% Similarity=0.063 Sum_probs=19.1
Q ss_pred HHHHHHHhhhCCCchhHHHHHHHHHHhhh
Q 032451 34 CSDAIAQKISGVKKLQLKRLLLLMLFDFG 62 (140)
Q Consensus 34 ~gD~laQ~~~~~~~~D~~R~~~~~~~G~~ 62 (140)
.+.+..+.++ +...||.|.+.+..||..
T Consensus 69 f~~V~~elF~-DG~~NWGRIVaLfaFg~~ 96 (146)
T d1k3ka_ 69 LGLSMLQVSG-DGNMNWGRALAILTFGSF 96 (146)
T ss_dssp HHTHHHHHCS-SCSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHc-CCCCCHHHHHHHHHHHHH
Confidence 3444444443 245799999999999875
No 10
>d1khda1 a.46.2.1 (A:12-80) Anthranilate phosphoribosyltransferase (TrpD) {Pectobacterium carotovorum [TaxId: 554]}
Probab=12.10 E-value=1.1e+02 Score=15.96 Aligned_cols=53 Identities=9% Similarity=0.127 Sum_probs=35.6
Q ss_pred HHHHHHhhccCCChHHHHHHHHHHHHh---HHHHHHHHHHHHHHHHhcCCChHHHHHH
Q 032451 71 LNKFLDAIFKGRDNKSVAKKVLLEQLI---FSPWINFLFMTYFGLVVEGKPWGSVMKK 125 (140)
Q Consensus 71 wy~~L~~~~~~~~~~~~~~Kvl~Dq~i---~~P~~~~~f~~~~~~~leg~~~~~~~~~ 125 (140)
|-..|+++..+.++..-=.+-++|+++ .++.-+..|+..+ -..|.+.+|+..-
T Consensus 2 ~~~il~kl~~g~~Ls~ee~~~~~~~i~~g~~~d~qiaafL~al--~~kg~t~dEi~g~ 57 (69)
T d1khda1 2 HQPILEKLFKSQSMTQEESHQLFAAIVRGELEDSQLAAALISM--KMRGERPEEIAGA 57 (69)
T ss_dssp CHHHHHHHHTTCCCCHHHHHHHHHHHTTTCSCHHHHHHHHHHH--HHHCCCHHHHHHH
T ss_pred HHHHHHHHHcCCCCCHHHHHHHHHHHHcCCCCHHHHHHHHHHH--HHhCCCHHHHHHH
Confidence 445677887776655555555566654 4677888888887 4678887776543
Done!