BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032454
(140 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A0L5Z9|RL17_MAGSM 50S ribosomal protein L17 OS=Magnetococcus sp. (strain MC-1)
GN=rplQ PE=3 SV=1
Length = 126
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 75/97 (77%), Gaps = 1/97 (1%)
Query: 1 MVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGD-DVIHKLFTE 59
M+ L KHERIETTV +AKE+R +A+ ++ LGK G L A R+A + + GD +V+HKLFT+
Sbjct: 24 MLVSLFKHERIETTVPRAKELRPVAEKVITLGKRGDLHARRQALSILNGDKEVVHKLFTD 83
Query: 60 LAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRE 96
LA R KDR GGYTR+L++R R GD APM++IE V+R+
Sbjct: 84 LAERNKDRQGGYTRILKTRFRYGDCAPMSFIELVERD 120
>sp|Q749B4|RL17_GEOSL 50S ribosomal protein L17 OS=Geobacter sulfurreducens (strain ATCC
51573 / DSM 12127 / PCA) GN=rplQ PE=3 SV=1
Length = 175
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 78/109 (71%), Gaps = 2/109 (1%)
Query: 1 MVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTEL 60
MV+ L HERI TT AKAKE+R +A+ M+ LGK G L A R+AA+++R V+ KLF+ +
Sbjct: 24 MVTSLFAHERITTTDAKAKELRSIAEKMITLGKRGDLHAVRQAASYIRDKKVVTKLFSTI 83
Query: 61 AYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR--ENELRQSKPAVP 107
A RYK+R GGYTR+++ IR GD AP++ IE V+ E ++++SKP P
Sbjct: 84 APRYKERDGGYTRIIKLGIRPGDCAPLSVIELVEEQFEKKVKKSKPTAP 132
>sp|A1ALW8|RL17_PELPD 50S ribosomal protein L17 OS=Pelobacter propionicus (strain DSM
2379) GN=rplQ PE=3 SV=1
Length = 127
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 70/96 (72%)
Query: 1 MVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTEL 60
MV+ L HE+I TT AKAKE+R +A+ M+ LGK G L + R AAAF+R V+ KLF+ +
Sbjct: 24 MVTSLFAHEKITTTDAKAKEIRSVAEKMITLGKRGDLHSTRIAAAFIREKSVVTKLFSTI 83
Query: 61 AYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRE 96
A RYK+RAGGYTR+++ R GDAAPM+ IE V+ E
Sbjct: 84 APRYKERAGGYTRIIKVGSRNGDAAPMSIIELVEEE 119
>sp|B3E858|RL17_GEOLS 50S ribosomal protein L17 OS=Geobacter lovleyi (strain ATCC
BAA-1151 / DSM 17278 / SZ) GN=rplQ PE=3 SV=1
Length = 124
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 71/94 (75%)
Query: 1 MVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTEL 60
MV+ L+ HERI TT AKAKE+R +A+ M+ LGK G L A R+AAA++R V+ KLF+ +
Sbjct: 24 MVTSLLNHERIVTTDAKAKEIRSVAEKMITLGKRGDLHAHRQAAAYIREKSVVTKLFSTI 83
Query: 61 AYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVD 94
A RYKDRAGGYTR+++ R+GDAA ++ IE V+
Sbjct: 84 APRYKDRAGGYTRIIKLGQRLGDAASLSVIELVE 117
>sp|A5GAU7|RL17_GEOUR 50S ribosomal protein L17 OS=Geobacter uraniireducens (strain Rf4)
GN=rplQ PE=3 SV=1
Length = 184
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 70/96 (72%)
Query: 1 MVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTEL 60
MV+ + HERI TT KAKE+R +A+ M+ LGK+G L A R+AA+++R V+ KLFT +
Sbjct: 24 MVTSFLNHERITTTDVKAKELRSIAEKMITLGKKGDLHAMRQAASYIRDKKVVTKLFTAI 83
Query: 61 AYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRE 96
A RY +RAGGYTR+++ IR GD AP++ IE V+ E
Sbjct: 84 APRYAERAGGYTRIIKLGIRPGDNAPLSVIELVEEE 119
>sp|Q2RQY5|RL17_RHORT 50S ribosomal protein L17 OS=Rhodospirillum rubrum (strain ATCC
11170 / NCIB 8255) GN=rplQ PE=3 SV=1
Length = 140
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 51/96 (53%), Positives = 71/96 (73%)
Query: 1 MVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTEL 60
M + L+KHE+I+TT+ KAK++R +A+ ++ LGK G+L R+A A +R D V+ KLF L
Sbjct: 24 MAASLLKHEQIKTTLPKAKDLRPIAEKLITLGKGGTLHDRRQAHAILRDDAVVAKLFAVL 83
Query: 61 AYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRE 96
RYKDR GGY+R+L++ R GDAAPMA IE VDR+
Sbjct: 84 GPRYKDRQGGYSRILKAGFRYGDAAPMAVIELVDRD 119
>sp|B9M6F1|RL17_GEOSF 50S ribosomal protein L17 OS=Geobacter sp. (strain FRC-32) GN=rplQ
PE=3 SV=1
Length = 181
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/94 (53%), Positives = 69/94 (73%)
Query: 1 MVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTEL 60
MV+ + HERI TT AKAK +R +A+ M+ LGK+G L A R+AA+F+R V+ KLFT +
Sbjct: 24 MVTSFLNHERITTTDAKAKGLRSIAEKMITLGKKGDLNAMRQAASFIRDKKVVTKLFTTI 83
Query: 61 AYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVD 94
A RY +RAGGYTR+++ IR GD AP++ IE V+
Sbjct: 84 APRYAERAGGYTRIIKLGIRPGDNAPLSVIELVE 117
>sp|B6JEX2|RL17_OLICO 50S ribosomal protein L17 OS=Oligotropha carboxidovorans (strain
ATCC 49405 / DSM 1227 / OM5) GN=rplQ PE=3 SV=1
Length = 139
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/96 (53%), Positives = 69/96 (71%)
Query: 1 MVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTEL 60
M + L+KHE+I TT+ KAKE+R + + +V LGK+G L R+A + +R D + KLF L
Sbjct: 24 MAASLIKHEQIVTTLPKAKELRPIVEKLVTLGKKGGLALRRQAISELRDHDQVKKLFDAL 83
Query: 61 AYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRE 96
A RYKDR GGYTR++++ R GD APMA IEFVDR+
Sbjct: 84 AARYKDRQGGYTRIIKAGFRYGDNAPMAVIEFVDRD 119
>sp|B6IRT1|RL17_RHOCS 50S ribosomal protein L17 OS=Rhodospirillum centenum (strain ATCC
51521 / SW) GN=rplQ PE=3 SV=1
Length = 139
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 70/98 (71%)
Query: 1 MVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTEL 60
M + L+KHE+I+TT+ KAK++R + + ++ LGK+G L R A A +R D++ KLFT L
Sbjct: 24 MANALIKHEQIKTTLPKAKDLRPIVERLITLGKKGGLANKRLAYAELRDHDMVEKLFTTL 83
Query: 61 AYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRENE 98
A RYK R GGYTR+L++ R GDAAPM IE VDR+ E
Sbjct: 84 AERYKGRPGGYTRVLKAGFRYGDAAPMGVIELVDRDPE 121
>sp|Q39XX8|RL17_GEOMG 50S ribosomal protein L17 OS=Geobacter metallireducens (strain
GS-15 / ATCC 53774 / DSM 7210) GN=rplQ PE=3 SV=1
Length = 178
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/96 (51%), Positives = 71/96 (73%)
Query: 1 MVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTEL 60
MV+ ++HERI TT AKAKE+R +A+ M+ LGK G L A R+AA+++R V+ KLF+ +
Sbjct: 24 MVTSFLEHERITTTDAKAKELRSIAEKMITLGKRGDLHAQRQAASYIRDKKVVTKLFSTI 83
Query: 61 AYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRE 96
A RYK+R GGYTR+++ IR GD AP++ IE V+ +
Sbjct: 84 APRYKERDGGYTRIIKLGIRPGDNAPLSVIELVEEQ 119
>sp|C6E4M9|RL17_GEOSM 50S ribosomal protein L17 OS=Geobacter sp. (strain M21) GN=rplQ
PE=3 SV=1
Length = 168
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/94 (52%), Positives = 70/94 (74%)
Query: 1 MVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTEL 60
MV+ ++HE+I TT AKAKE+R +A+ M+ LGK G L A R+AAA++R V+ KLFTE+
Sbjct: 24 MVTSFLQHEKITTTDAKAKELRSIAEKMITLGKRGDLHATRQAAAYIRDKKVVTKLFTEI 83
Query: 61 AYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVD 94
A RY +R GGYTR+++ IR GD AP++ +E V+
Sbjct: 84 APRYTERPGGYTRIIKLGIRPGDNAPVSVLELVE 117
>sp|Q0AUL0|RL17_SYNWW 50S ribosomal protein L17 OS=Syntrophomonas wolfei subsp. wolfei
(strain Goettingen) GN=rplQ PE=3 SV=1
Length = 113
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 69/93 (74%)
Query: 2 VSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELA 61
V+ L+K E+I TT +AKE++RL + M+ LGK G L A R+AAA++ D+V+ KLF+++A
Sbjct: 21 VTSLLKEEKISTTETRAKEIKRLTEKMITLGKRGDLHARRQAAAYIMSDEVVQKLFSDIA 80
Query: 62 YRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVD 94
RY++R GGYTRL+++ R GD APM IE V+
Sbjct: 81 ARYEERNGGYTRLVKTGYRKGDGAPMVMIELVE 113
>sp|A5FZU0|RL17_ACICJ 50S ribosomal protein L17 OS=Acidiphilium cryptum (strain JF-5)
GN=rplQ PE=3 SV=1
Length = 146
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/96 (54%), Positives = 70/96 (72%)
Query: 1 MVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTEL 60
M L+KHE+I TT+ KAKE+R +A+ ++ LGK G L A R+A A +R D ++ KLF L
Sbjct: 24 MAVALLKHEQITTTLPKAKELRPVAEKLITLGKRGGLHARRQAHALLRDDVIVAKLFDSL 83
Query: 61 AYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRE 96
A RYK+R GGYTR+L++ +R GDAA MA IE VDR+
Sbjct: 84 ADRYKERQGGYTRVLKAGMRYGDAADMAVIELVDRD 119
>sp|C0ZIK8|RL17_BREBN 50S ribosomal protein L17 OS=Brevibacillus brevis (strain 47 / JCM
6285 / NBRC 100599) GN=rplQ PE=3 SV=1
Length = 119
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/100 (55%), Positives = 71/100 (71%), Gaps = 7/100 (7%)
Query: 1 MVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVR-------GDDVI 53
+V+ L+ +ERIETT KAKE+R +A+ M+ L K G L A R+ AAFVR G D +
Sbjct: 20 LVTDLIINERIETTEMKAKELRPIAEKMITLAKRGDLHARRQVAAFVRKEVANAEGRDAV 79
Query: 54 HKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFV 93
KLF E+A R+K+R GGYTR+L++ R GDAAPMAYIEFV
Sbjct: 80 QKLFDEIAPRFKERNGGYTRILKAGPRRGDAAPMAYIEFV 119
>sp|Q3SSU1|RL17_NITWN 50S ribosomal protein L17 OS=Nitrobacter winogradskyi (strain
Nb-255 / ATCC 25391) GN=rplQ PE=3 SV=1
Length = 138
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 70/98 (71%)
Query: 1 MVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTEL 60
M + L+KHE+I TT+ KAKE+R + + +V LGK+G L R+A + +R D + KLF L
Sbjct: 24 MSASLIKHEQIVTTLPKAKELRPIVEKLVTLGKKGGLAKRRQAISEMRDIDQVKKLFDVL 83
Query: 61 AYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRENE 98
A RYKDR GGYTR++++ R GD APMA IEFVDR+ E
Sbjct: 84 APRYKDRHGGYTRIIKAGFRYGDNAPMAVIEFVDRDVE 121
>sp|Q5LW31|RL17_RUEPO 50S ribosomal protein L17 OS=Ruegeria pomeroyi (strain ATCC 700808
/ DSM 15171 / DSS-3) GN=rplQ PE=3 SV=1
Length = 140
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 51/96 (53%), Positives = 69/96 (71%)
Query: 1 MVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTEL 60
M L++HE+I+TT+ KAKE+R + + ++ LGK G L A R+AAA ++ D + KLF L
Sbjct: 24 MAGSLIEHEQIKTTLPKAKELRPIVEKLITLGKRGDLHARRQAAAQLKEDKDVAKLFDVL 83
Query: 61 AYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRE 96
A RYKDR GGY R+L++ R GD APMA IEFVDR+
Sbjct: 84 AERYKDRQGGYVRILKAGFRYGDMAPMAIIEFVDRD 119
>sp|Q1QN05|RL17_NITHX 50S ribosomal protein L17 OS=Nitrobacter hamburgensis (strain X14 /
DSM 10229) GN=rplQ PE=3 SV=1
Length = 138
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 51/96 (53%), Positives = 69/96 (71%)
Query: 1 MVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTEL 60
M + L+KHE+I TT+ KAKE+R + + +V LGK+G L R+A + +R D + KLF L
Sbjct: 24 MAASLIKHEQIVTTLPKAKELRPIVEKLVTLGKKGGLDKRRQAISEMRDIDQVKKLFAVL 83
Query: 61 AYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRE 96
A RYKDR GGYTR++++ R GD APMA IEFVDR+
Sbjct: 84 APRYKDRQGGYTRIIKAGFRYGDNAPMAVIEFVDRD 119
>sp|A1REE0|RL17_SHESW 50S ribosomal protein L17 OS=Shewanella sp. (strain W3-18-1)
GN=rplQ PE=3 SV=1
Length = 131
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 67/95 (70%)
Query: 1 MVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTEL 60
M S LV+HE I+TTVAKAKE+RR+ + ++ L K S+ R A A R +V+ KLFTEL
Sbjct: 24 MASSLVRHEIIKTTVAKAKELRRVVEPLITLAKSDSVANRRLAFARTRDAEVVGKLFTEL 83
Query: 61 AYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 95
RY++R GGYTR+L+ +R GD APMAYIE V R
Sbjct: 84 GPRYQERPGGYTRILKCGLRAGDKAPMAYIELVGR 118
>sp|A4YBV7|RL17_SHEPC 50S ribosomal protein L17 OS=Shewanella putrefaciens (strain CN-32
/ ATCC BAA-453) GN=rplQ PE=3 SV=1
Length = 131
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 67/95 (70%)
Query: 1 MVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTEL 60
M S LV+HE I+TTVAKAKE+RR+ + ++ L K S+ R A A R +V+ KLFTEL
Sbjct: 24 MASSLVRHEIIKTTVAKAKELRRVVEPLITLAKSDSVANRRLAFARTRDAEVVGKLFTEL 83
Query: 61 AYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 95
RY++R GGYTR+L+ +R GD APMAYIE V R
Sbjct: 84 GPRYQERPGGYTRILKCGLRAGDKAPMAYIELVGR 118
>sp|Q8EK46|RL17_SHEON 50S ribosomal protein L17 OS=Shewanella oneidensis (strain MR-1)
GN=rplQ PE=3 SV=1
Length = 131
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 67/95 (70%)
Query: 1 MVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTEL 60
M S LV+HE I+TTVAKAKE+RR+ + ++ L K S+ R A A R +V+ KLFTEL
Sbjct: 24 MASSLVRHEIIKTTVAKAKELRRVVEPLITLAKSDSVANRRLAFARTRDAEVVGKLFTEL 83
Query: 61 AYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 95
RY++R GGYTR+L+ +R GD APMAYIE V R
Sbjct: 84 GPRYQERPGGYTRILKCGLRAGDKAPMAYIELVGR 118
>sp|Q0I079|RL17_SHESR 50S ribosomal protein L17 OS=Shewanella sp. (strain MR-7) GN=rplQ
PE=3 SV=1
Length = 131
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 67/95 (70%)
Query: 1 MVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTEL 60
M S LV+HE I+TTVAKAKE+RR+ + ++ L K S+ R A A R +V+ KLFTEL
Sbjct: 24 MASSLVRHEIIKTTVAKAKELRRVVEPLITLAKSDSVANRRLAFARTRDAEVVGKLFTEL 83
Query: 61 AYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 95
RY++R GGYTR+L+ +R GD APMAYIE V R
Sbjct: 84 GPRYQERPGGYTRILKCGLRAGDKAPMAYIELVGR 118
>sp|Q0HNR1|RL17_SHESM 50S ribosomal protein L17 OS=Shewanella sp. (strain MR-4) GN=rplQ
PE=3 SV=1
Length = 131
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 67/95 (70%)
Query: 1 MVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTEL 60
M S LV+HE I+TTVAKAKE+RR+ + ++ L K S+ R A A R +V+ KLFTEL
Sbjct: 24 MASSLVRHEIIKTTVAKAKELRRVVEPLITLAKSDSVANRRLAFARTRDAEVVGKLFTEL 83
Query: 61 AYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 95
RY++R GGYTR+L+ +R GD APMAYIE V R
Sbjct: 84 GPRYQERPGGYTRILKCGLRAGDKAPMAYIELVGR 118
>sp|A0KRQ0|RL17_SHESA 50S ribosomal protein L17 OS=Shewanella sp. (strain ANA-3) GN=rplQ
PE=3 SV=1
Length = 131
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 67/95 (70%)
Query: 1 MVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTEL 60
M S LV+HE I+TTVAKAKE+RR+ + ++ L K S+ R A A R +V+ KLFTEL
Sbjct: 24 MASSLVRHEIIKTTVAKAKELRRVVEPLITLAKSDSVANRRLAFARTRDAEVVGKLFTEL 83
Query: 61 AYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 95
RY++R GGYTR+L+ +R GD APMAYIE V R
Sbjct: 84 GPRYQERPGGYTRILKCGLRAGDKAPMAYIELVGR 118
>sp|Q03PY4|RL17_LACBA 50S ribosomal protein L17 OS=Lactobacillus brevis (strain ATCC 367
/ JCM 1170) GN=rplQ PE=3 SV=1
Length = 127
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 73/108 (67%), Gaps = 14/108 (12%)
Query: 1 MVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVR---------GDD 51
+ + L+ + RIETT A+AKEVR+ AD M+ LGK+G L A R+AAAF+R GDD
Sbjct: 20 LTTSLILNGRIETTEARAKEVRKTADQMITLGKQGDLHARRQAAAFIRNVVADVKEDGDD 79
Query: 52 VI-----HKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVD 94
V+ K+F+ELA +Y DR GGYTR++++ R GD A MA +EFVD
Sbjct: 80 VVVTSALQKVFSELAPKYADRKGGYTRIMKTMPRRGDGAAMAILEFVD 127
>sp|Q134V4|RL17_RHOPS 50S ribosomal protein L17 OS=Rhodopseudomonas palustris (strain
BisB5) GN=rplQ PE=3 SV=1
Length = 136
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 76/114 (66%), Gaps = 1/114 (0%)
Query: 1 MVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTEL 60
M + L+KHE+I TT+ KAKE+R + + +V LGK+G L R+A + +R D + KLF L
Sbjct: 24 MCAALIKHEQIVTTLPKAKELRPIVEKLVTLGKKGGLDKRRQAISEMRDLDQVRKLFGVL 83
Query: 61 AYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRENELRQSKPAVPQPPPRAA 114
A RYKDR GGYTR++++ R GD APMA IEFVDR+ + + K + P AA
Sbjct: 84 APRYKDRNGGYTRIIKAGFRYGDNAPMAVIEFVDRDEDAK-GKDSGPTQESEAA 136
>sp|A8ZV83|RL17_DESOH 50S ribosomal protein L17 OS=Desulfococcus oleovorans (strain DSM
6200 / Hxd3) GN=rplQ PE=3 SV=1
Length = 208
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 65/93 (69%)
Query: 1 MVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTEL 60
MV+ L+KHE+I+TT AKAKE+RR AD+++ L K G L A R+ A VR +V+HKLF E
Sbjct: 24 MVTSLLKHEKIQTTDAKAKELRRWADHVITLAKRGDLHARRQVMAIVREKNVVHKLFAEA 83
Query: 61 AYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFV 93
A R+ R GGYTRL + R GDAAP+ IE V
Sbjct: 84 AERFGSREGGYTRLTKIGARPGDAAPVTLIELV 116
>sp|B5FGE2|RL17_VIBFM 50S ribosomal protein L17 OS=Vibrio fischeri (strain MJ11) GN=rplQ
PE=3 SV=1
Length = 126
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 66/95 (69%)
Query: 1 MVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTEL 60
M S LV+HE I+TT+ KAKE+RR+ + ++ L K S+ R A A R ++V+ KLFTEL
Sbjct: 24 MASSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEVVAKLFTEL 83
Query: 61 AYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 95
R+ RAGGYTR+L+ R GD APMAYIE VDR
Sbjct: 84 GPRFAQRAGGYTRILKCGFRAGDKAPMAYIELVDR 118
>sp|Q5E888|RL17_VIBF1 50S ribosomal protein L17 OS=Vibrio fischeri (strain ATCC 700601 /
ES114) GN=rplQ PE=3 SV=1
Length = 126
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 66/95 (69%)
Query: 1 MVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTEL 60
M S LV+HE I+TT+ KAKE+RR+ + ++ L K S+ R A A R ++V+ KLFTEL
Sbjct: 24 MASSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEVVAKLFTEL 83
Query: 61 AYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 95
R+ RAGGYTR+L+ R GD APMAYIE VDR
Sbjct: 84 GPRFAQRAGGYTRILKCGFRAGDKAPMAYIELVDR 118
>sp|A0LIL8|RL17_SYNFM 50S ribosomal protein L17 OS=Syntrophobacter fumaroxidans (strain
DSM 10017 / MPOB) GN=rplQ PE=3 SV=1
Length = 151
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 65/93 (69%)
Query: 1 MVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTEL 60
MV+ L++HERI TT+ KAKE+RR AD M+ LGK G L A R+ A VR + + K+F EL
Sbjct: 24 MVTSLLQHERIFTTLPKAKELRRWADWMISLGKRGDLHARRQVMACVREKETVQKIFAEL 83
Query: 61 AYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFV 93
RY+ R GGYTR++++ R GDA+PM IE +
Sbjct: 84 GPRYQSRPGGYTRIVKAGYRRGDASPMCLIELI 116
>sp|B6EPV0|RL17_ALISL 50S ribosomal protein L17 OS=Aliivibrio salmonicida (strain
LFI1238) GN=rplQ PE=3 SV=1
Length = 126
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 65/95 (68%)
Query: 1 MVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTEL 60
M LV+HE I+TTV KAKE+RR+ + ++ L K S+ R A A R ++V+ KLFTEL
Sbjct: 24 MACSLVRHEIIKTTVPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEVVAKLFTEL 83
Query: 61 AYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 95
R+ RAGGYTR+L+ R GD APMAYIE VDR
Sbjct: 84 GPRFAQRAGGYTRILKCGFRTGDKAPMAYIELVDR 118
>sp|Q89JA8|RL17_BRAJA 50S ribosomal protein L17 OS=Bradyrhizobium japonicum (strain USDA
110) GN=rplQ PE=3 SV=1
Length = 138
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 68/96 (70%)
Query: 1 MVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTEL 60
M + L+KHE+I TT+ KAKE+R + + +V LGK+G L R+A + +R D + KLF L
Sbjct: 24 MAAALIKHEQIVTTLPKAKELRPIVEKLVTLGKKGGLAMRRQAISEMRDKDQVKKLFDVL 83
Query: 61 AYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRE 96
A RYKDR GGYTR++++ R GD A MA IEFVDR+
Sbjct: 84 ATRYKDRQGGYTRIIKAGFRYGDNAAMAVIEFVDRD 119
>sp|A4YSL7|RL17_BRASO 50S ribosomal protein L17 OS=Bradyrhizobium sp. (strain ORS278)
GN=rplQ PE=3 SV=1
Length = 137
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 73/114 (64%)
Query: 1 MVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTEL 60
M + L+KHE+I TT+ KAKE+R + + +V LGK+G L R+A A +R D + KLF L
Sbjct: 24 MCASLIKHEQIVTTLPKAKELRPIVEKLVTLGKKGGLALRRQAIAEMRDVDQVKKLFDVL 83
Query: 61 AYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRENELRQSKPAVPQPPPRAA 114
A RYKDR GGYTR++++ R GD A MA IEFVDR+ + + Q AA
Sbjct: 84 APRYKDRNGGYTRIIKAGFRYGDNAAMAVIEFVDRDVDAKGQDSGPVQETSEAA 137
>sp|Q211H3|RL17_RHOPB 50S ribosomal protein L17 OS=Rhodopseudomonas palustris (strain
BisB18) GN=rplQ PE=3 SV=1
Length = 135
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/96 (51%), Positives = 68/96 (70%)
Query: 1 MVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTEL 60
M + L+KHE+I TT+ KAKE+R + + +V LGK+G L R+A + ++ D + KLF L
Sbjct: 24 MCASLIKHEQIVTTLPKAKELRPIVEKLVTLGKKGGLALRRQAISEMKDQDQVRKLFDVL 83
Query: 61 AYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRE 96
A RY DR GGYTR++++ R GD APMA IEFVDR+
Sbjct: 84 AKRYADRQGGYTRIIKAGFRYGDNAPMAVIEFVDRD 119
>sp|Q9S0Q7|RL17_SHEVD 50S ribosomal protein L17 OS=Shewanella violacea (strain JCM 10179
/ CIP 106290 / LMG 19151 / DSS12) GN=rplQ PE=3 SV=1
Length = 131
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 66/95 (69%)
Query: 1 MVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTEL 60
M S LV+HE I+TTVAKAKE+RR+ + ++ L K S+ R A A R +V+ KLF EL
Sbjct: 24 MASSLVRHEVIKTTVAKAKELRRVVEPLITLAKSDSVANRRLAFARTRDAEVVGKLFNEL 83
Query: 61 AYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 95
RY++R GGYTR+L+ +R GD APMAYIE V R
Sbjct: 84 GPRYQERPGGYTRILKCGLRTGDKAPMAYIELVGR 118
>sp|A3Q9A8|RL17_SHELP 50S ribosomal protein L17 OS=Shewanella loihica (strain ATCC
BAA-1088 / PV-4) GN=rplQ PE=3 SV=1
Length = 130
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 66/95 (69%)
Query: 1 MVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTEL 60
M S LV+HE I+TTVAKAKE+RR+ + ++ L K S+ R A A R +V+ KLF EL
Sbjct: 24 MASSLVRHEVIKTTVAKAKELRRVVEPLITLAKSDSVANRRLAFARTRDAEVVGKLFNEL 83
Query: 61 AYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 95
RY++R GGYTR+L+ +R GD APMAYIE V R
Sbjct: 84 GPRYQERPGGYTRILKCGLRTGDKAPMAYIELVGR 118
>sp|Q5WLN4|RL17_BACSK 50S ribosomal protein L17 OS=Bacillus clausii (strain KSM-K16)
GN=rplQ PE=3 SV=1
Length = 120
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 69/101 (68%), Gaps = 8/101 (7%)
Query: 1 MVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVR--------GDDV 52
+V+ L+ +ERIETT AKAKE+R + + M+ LGK G L A R+AAAFVR G D
Sbjct: 20 LVTDLIINERIETTEAKAKELRPIVEKMITLGKRGDLHARRQAAAFVRNEIADVESGQDA 79
Query: 53 IHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFV 93
I KLF ++A R+ +R GGYTR+L+ R GD APMA IEFV
Sbjct: 80 IQKLFADIAPRFAERQGGYTRILKVGPRRGDGAPMAIIEFV 120
>sp|O50635|RL17_BACHD 50S ribosomal protein L17 OS=Bacillus halodurans (strain ATCC
BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
GN=rplQ PE=3 SV=2
Length = 120
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 69/101 (68%), Gaps = 8/101 (7%)
Query: 1 MVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVR--------GDDV 52
+ + L+ +ERIETT AKAKE+R + + M+ LGK G L A R+AAAF+R G D
Sbjct: 20 LATDLIINERIETTEAKAKELRSVVEKMITLGKRGDLHARRQAAAFIRREVADEETGQDA 79
Query: 53 IHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFV 93
I KLF+++A RY+DR GGYTR+L+ R GD APMA IE V
Sbjct: 80 IQKLFSDIAPRYEDRQGGYTRVLKVGPRRGDGAPMAIIELV 120
>sp|B1KM34|RL17_SHEWM 50S ribosomal protein L17 OS=Shewanella woodyi (strain ATCC 51908 /
MS32) GN=rplQ PE=3 SV=1
Length = 132
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 66/95 (69%)
Query: 1 MVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTEL 60
M S LV+HE I+TTVAKAKE+RR+ + ++ L K S+ R A A R +V+ KLF EL
Sbjct: 24 MASSLVRHEVIKTTVAKAKELRRVVEPLITLAKSDSVANRRLAFARTRDAEVVGKLFNEL 83
Query: 61 AYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 95
RY++R GGYTR+L+ +R GD APMAYIE V R
Sbjct: 84 GPRYQERPGGYTRILKCGLRTGDKAPMAYIELVGR 118
>sp|A9NEG1|RL17_ACHLI 50S ribosomal protein L17 OS=Acholeplasma laidlawii (strain PG-8A)
GN=rplQ PE=3 SV=1
Length = 119
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 70/99 (70%), Gaps = 6/99 (6%)
Query: 1 MVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVR------GDDVIH 54
+V+ L+ ++RI TT AKAK V+R+AD MV L K+G+L A R+AA VR G D +
Sbjct: 21 LVTDLIINDRITTTEAKAKSVQRVADKMVTLAKKGTLAARRQAAETVRLEDAGEGKDALQ 80
Query: 55 KLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFV 93
KLF+ +A RY DR GGYTR++++ R GDAAPMA IEF+
Sbjct: 81 KLFSVIAPRYNDRTGGYTRIIKTVPRRGDAAPMAIIEFI 119
>sp|A9KWC7|RL17_SHEB9 50S ribosomal protein L17 OS=Shewanella baltica (strain OS195)
GN=rplQ PE=3 SV=1
Length = 131
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 66/95 (69%)
Query: 1 MVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTEL 60
M LV+HE I+TTVAKAKE+RR+ + ++ L K S+ R A A R +V+ KLFTEL
Sbjct: 24 MAGSLVRHEIIKTTVAKAKELRRVVEPLITLAKSDSVANRRLAFARTRDAEVVGKLFTEL 83
Query: 61 AYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 95
RY++R GGYTR+L+ +R GD APMAYIE V R
Sbjct: 84 GPRYQERPGGYTRILKCGLRAGDKAPMAYIELVGR 118
>sp|A6WHV4|RL17_SHEB8 50S ribosomal protein L17 OS=Shewanella baltica (strain OS185)
GN=rplQ PE=3 SV=1
Length = 131
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 66/95 (69%)
Query: 1 MVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTEL 60
M LV+HE I+TTVAKAKE+RR+ + ++ L K S+ R A A R +V+ KLFTEL
Sbjct: 24 MAGSLVRHEIIKTTVAKAKELRRVVEPLITLAKSDSVANRRLAFARTRDAEVVGKLFTEL 83
Query: 61 AYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 95
RY++R GGYTR+L+ +R GD APMAYIE V R
Sbjct: 84 GPRYQERPGGYTRILKCGLRAGDKAPMAYIELVGR 118
>sp|A3DA46|RL17_SHEB5 50S ribosomal protein L17 OS=Shewanella baltica (strain OS155 /
ATCC BAA-1091) GN=rplQ PE=3 SV=1
Length = 131
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 66/95 (69%)
Query: 1 MVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTEL 60
M LV+HE I+TTVAKAKE+RR+ + ++ L K S+ R A A R +V+ KLFTEL
Sbjct: 24 MAGSLVRHEIIKTTVAKAKELRRVVEPLITLAKSDSVANRRLAFARTRDAEVVGKLFTEL 83
Query: 61 AYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 95
RY++R GGYTR+L+ +R GD APMAYIE V R
Sbjct: 84 GPRYQERPGGYTRILKCGLRAGDKAPMAYIELVGR 118
>sp|B8EBH9|RL17_SHEB2 50S ribosomal protein L17 OS=Shewanella baltica (strain OS223)
GN=rplQ PE=3 SV=1
Length = 131
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 66/95 (69%)
Query: 1 MVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTEL 60
M LV+HE I+TTVAKAKE+RR+ + ++ L K S+ R A A R +V+ KLFTEL
Sbjct: 24 MAGSLVRHEIIKTTVAKAKELRRVVEPLITLAKSDSVANRRLAFARTRDAEVVGKLFTEL 83
Query: 61 AYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 95
RY++R GGYTR+L+ +R GD APMAYIE V R
Sbjct: 84 GPRYQERPGGYTRILKCGLRAGDKAPMAYIELVGR 118
>sp|Q0BUM5|RL17_GRABC 50S ribosomal protein L17 OS=Granulibacter bethesdensis (strain
ATCC BAA-1260 / CGDNIH1) GN=rplQ PE=3 SV=1
Length = 138
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 70/96 (72%)
Query: 1 MVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTEL 60
M L+KHE+I TT+ KAKE+R +A+ ++ LGK G L A R+A A +R + ++ KLF+ +
Sbjct: 24 MAVALIKHEQITTTLPKAKELRPVAEKLITLGKRGGLHARRQAYAQLRDEVIVTKLFSAI 83
Query: 61 AYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRE 96
A RYK R GGYTR+L++ +R GDAA MA IE VDR+
Sbjct: 84 AERYKARQGGYTRVLKAGVRYGDAASMAVIELVDRD 119
>sp|A5ELK2|RL17_BRASB 50S ribosomal protein L17 OS=Bradyrhizobium sp. (strain BTAi1 /
ATCC BAA-1182) GN=rplQ PE=3 SV=1
Length = 137
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 73/114 (64%)
Query: 1 MVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTEL 60
M + L+KHE+I TT+ KAKE+R + + +V LGK+G L R+A A +R D + KLF L
Sbjct: 24 MCAALIKHEQIVTTLPKAKELRPIVEKLVTLGKKGGLALRRQAIAEMRDVDQVKKLFDVL 83
Query: 61 AYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRENELRQSKPAVPQPPPRAA 114
A RYKDR GGYTR++++ R GD A MA IEFVDR+ + + Q AA
Sbjct: 84 APRYKDRNGGYTRIIKAGFRYGDNAAMAVIEFVDRDVDAKGQDSGPVQETSEAA 137
>sp|Q8RE45|RL17_FUSNN 50S ribosomal protein L17 OS=Fusobacterium nucleatum subsp.
nucleatum (strain ATCC 25586 / CIP 101130 / JCM 8532 /
LMG 13131) GN=rplQ PE=3 SV=1
Length = 116
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 68/93 (73%)
Query: 1 MVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTEL 60
M L+K ERIETTV +AKE+R+ A+ M+ GK+ +L + R A AF+R ++V+ K+F E+
Sbjct: 24 MTISLIKAERIETTVTRAKELRKFAERMITFGKKNTLASRRNAFAFLRDEEVVAKIFNEI 83
Query: 61 AYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFV 93
A +Y +R GGYTR++++ +R GD+A MA IE V
Sbjct: 84 APKYAERNGGYTRIIKTSVRKGDSAEMAIIELV 116
>sp|B0TLY7|RL17_SHEHH 50S ribosomal protein L17 OS=Shewanella halifaxensis (strain
HAW-EB4) GN=rplQ PE=3 SV=1
Length = 130
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 66/95 (69%)
Query: 1 MVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTEL 60
M +V+HE I+TTVAKAKE+RR+ + ++ L K S+ R A A R +V+ KLFTEL
Sbjct: 24 MACSIVRHEVIKTTVAKAKELRRVVEPLITLAKSDSVANRRLAFARTRDAEVVGKLFTEL 83
Query: 61 AYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 95
R++DR GGYTR+L+ +R GD APMAYIE V R
Sbjct: 84 GPRFQDRPGGYTRILKCGLRTGDKAPMAYIELVGR 118
>sp|Q2W2L4|RL17_MAGSA 50S ribosomal protein L17 OS=Magnetospirillum magneticum (strain
AMB-1 / ATCC 700264) GN=rplQ PE=3 SV=1
Length = 140
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 68/96 (70%)
Query: 1 MVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTEL 60
+ + L+KHE+I+TT+ KAK+ R + + ++ LGK G L A R+A AF+R D V+ KLF +
Sbjct: 24 LANALLKHEQIKTTLPKAKDARPIVEKLITLGKRGDLHARRQAYAFLRDDKVVAKLFAVI 83
Query: 61 AYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRE 96
RYK+R GGY R+L++ R GD APMA IE VDR+
Sbjct: 84 GPRYKERQGGYCRVLKAGFRYGDCAPMAIIELVDRD 119
>sp|B7GJ95|RL17_ANOFW 50S ribosomal protein L17 OS=Anoxybacillus flavithermus (strain DSM
21510 / WK1) GN=rplQ PE=3 SV=1
Length = 120
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 69/101 (68%), Gaps = 8/101 (7%)
Query: 1 MVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVR--------GDDV 52
+V+ L+ +ERIETT A+AKE+R + + M+ LGK G L A R+AAAFVR G D
Sbjct: 20 LVTDLIINERIETTEARAKELRSVVEKMITLGKRGDLHARRQAAAFVRKEVANTETGQDA 79
Query: 53 IHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFV 93
I KLF+++A RY+DR GGYTR+++ R GD APM IE V
Sbjct: 80 IQKLFSDIAPRYQDRQGGYTRIMKLGPRRGDGAPMVIIELV 120
>sp|Q04BY8|RL17_LACDB 50S ribosomal protein L17 OS=Lactobacillus delbrueckii subsp.
bulgaricus (strain ATCC BAA-365) GN=rplQ PE=3 SV=1
Length = 127
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 73/108 (67%), Gaps = 15/108 (13%)
Query: 1 MVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVR---------GDD 51
M +QL+ +ERI TT A+AKEVRR A+ M+ LGK G L A R+AAAFVR GD+
Sbjct: 20 MTTQLIINERIVTTEARAKEVRRTAEKMITLGKRGDLAARRKAAAFVRNEIADIHEEGDE 79
Query: 52 VI-----HKLFTELAYRYKDRAGGYTRLLRSRI-RVGDAAPMAYIEFV 93
V+ KLF+++A RYKDR GGYTR+++ + R GDAAPM +E V
Sbjct: 80 VVVKSALQKLFSDVAPRYKDRNGGYTRIMKLAVPRKGDAAPMVVLELV 127
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.132 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,573,645
Number of Sequences: 539616
Number of extensions: 1900275
Number of successful extensions: 7114
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 808
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 6086
Number of HSP's gapped (non-prelim): 830
length of query: 140
length of database: 191,569,459
effective HSP length: 105
effective length of query: 35
effective length of database: 134,909,779
effective search space: 4721842265
effective search space used: 4721842265
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)