Query 032457
Match_columns 140
No_of_seqs 122 out of 1045
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 23:37:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032457.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032457hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1jy5_A CALSEPRRP; RNAse, alpha 100.0 1.4E-33 4.7E-38 218.3 11.3 111 2-122 100-210 (212)
2 1sgl_A Trichomaglin; S-like ri 100.0 2.3E-33 8E-38 216.6 11.2 108 2-120 100-208 (209)
3 1vcz_A RNAse NGR3; hydrolase, 100.0 8.6E-33 2.9E-37 214.6 8.9 112 2-124 96-213 (217)
4 1iyb_A Ribonuclease, ribonucle 100.0 1.6E-32 5.4E-37 211.8 10.2 107 2-119 96-208 (208)
5 1ucd_A Ribonuclease MC; alpha 100.0 1.1E-30 3.9E-35 198.9 9.9 101 2-116 83-190 (190)
6 1ioo_A SF11-RNAse; SELF-incomp 100.0 2.3E-30 7.8E-35 198.0 11.0 103 2-118 86-196 (196)
7 3d3z_A Actibind; RNAse, hydrol 100.0 1.3E-30 4.3E-35 206.4 8.6 113 2-123 110-239 (247)
8 1iqq_A S3-RNAse; japanese PEAR 100.0 7E-30 2.4E-34 195.8 10.2 109 2-116 83-200 (200)
9 1bol_A Protein (ribonuclease R 100.0 5E-30 1.7E-34 199.9 7.8 107 2-119 104-222 (222)
10 3t0o_A Ribonuclease T2, ribonu 100.0 4.3E-29 1.5E-33 196.9 10.2 119 2-121 89-229 (238)
11 2pqx_A Ribonuclease I; hydrola 99.9 1E-25 3.4E-30 177.7 7.2 100 2-120 128-244 (245)
12 4dvk_A E(RNS) glycoprotein; T2 98.2 3E-07 1E-11 68.3 0.3 24 2-28 74-97 (165)
13 2ciw_A Chloroperoxidase; oxido 83.5 0.73 2.5E-05 37.0 3.0 34 35-68 33-66 (299)
14 3oqg_A HPY188I; endonuclease-D 55.4 3.4 0.00012 29.5 0.7 18 2-25 103-120 (180)
15 2cu1_A Mitogen-activated prote 23.6 98 0.0034 20.7 3.8 27 49-75 26-52 (103)
No 1
>1jy5_A CALSEPRRP; RNAse, alpha-beta protein, hydrolase; 2.05A {Calystegia sepium} SCOP: d.124.1.1
Probab=100.00 E-value=1.4e-33 Score=218.27 Aligned_cols=111 Identities=50% Similarity=0.924 Sum_probs=102.1
Q ss_pred cccccccccCCCCCCCHHHHHHHHHHHHHhcCchHHHHhCCCCCCCCCCCChHHHHHHHHHHhCCccEEEeccCCcceEE
Q 032457 2 VLAEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAFHATPKLDCSKDAVNELH 81 (140)
Q Consensus 2 ~eW~KHGTCs~~~~~~~~~YF~~al~L~~k~ni~~~L~~~gI~Ps~~~~~~~~~I~~ai~~~~g~~p~l~C~~~~L~EV~ 81 (140)
.||+|||||+..++.+|.+||++|++|++++|++++|+++||+|+++++|++++|++||++++|..|.|+|.++.|.||+
T Consensus 100 hEw~KHGTC~~~~~~~~~~YF~~a~~l~~~~nl~~~L~~~gI~Ps~g~~yt~~~I~~Ai~~~~g~~p~l~C~~~~l~ev~ 179 (212)
T 1jy5_A 100 YEWAKHGTCSSPVLGNQYEYFSTTLMLYFKYNISEILSESGYLPSNTAEYKVEGIMSAIQSALRVTPVVKCKSDAVEQVQ 179 (212)
T ss_dssp HHHHHTGGGGTTTSCSHHHHHHHHHHHHHHSCHHHHHHTTTCCCCSSCCEEHHHHHHHHHHHHSSCCEEEEETTEEEEEE
T ss_pred HhhhhCceeCcccccCHHHHHHHHHHHHHhcCHHHHHHHcCCcCCCCceEcHHHHHHHHHHhhCCCEEEEeCCCCcceEE
Confidence 49999999999754599999999999999999999999999999888899999999999999999999999999999999
Q ss_pred EEEeCCCceeeCCCCCCCCCCCCCCCCCCCCceEeccCccC
Q 032457 82 LCFYKDFKPRDCIIERSPENDNYFSSSSCPKYVSLPVYMSS 122 (140)
Q Consensus 82 iC~d~~~~~~~Cp~~~~~~~~~~~~~~~C~~~i~~p~~~~~ 122 (140)
||||+++++++||. ..++|+++|.||++++.
T Consensus 180 lC~~~~~~~i~C~~----------~~~~C~~~i~~p~~~~~ 210 (212)
T 1jy5_A 180 ICFDKTLQLQECPS----------TASTCPSLVSLPIKNTI 210 (212)
T ss_dssp EEECTTSCEECCCC----------CCCCSCSEEBCCCCC--
T ss_pred EEEcCCCcEecCCC----------CCCCCCCCEEeCCCCCC
Confidence 99999999999983 25689999999999863
No 2
>1sgl_A Trichomaglin; S-like ribonuclease, X-RAY sequence, MASS SPEC analysis, hydrolase; 2.20A {Trichosanthes lepiniana} SCOP: d.124.1.1
Probab=100.00 E-value=2.3e-33 Score=216.58 Aligned_cols=108 Identities=51% Similarity=0.943 Sum_probs=100.7
Q ss_pred cccccccccCCCCCCCHHHHHHHHHHHHHhcCchHHHHhCCCCCCCCCCCChHHHHHHHHHHhCCccEEEecc-CCcceE
Q 032457 2 VLAEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAFHATPKLDCSK-DAVNEL 80 (140)
Q Consensus 2 ~eW~KHGTCs~~~~~~~~~YF~~al~L~~k~ni~~~L~~~gI~Ps~~~~~~~~~I~~ai~~~~g~~p~l~C~~-~~L~EV 80 (140)
.||+|||||+..++.+|.+||++|++|++++|++++|+++||+|+.+++|++++|++||++++|..|.|+|.+ +.|.||
T Consensus 100 hEw~KHGTC~~~~~~~~~~YF~~a~~L~~~~~l~~~L~~~gI~P~~g~~yt~~~I~~Ai~~~~g~~p~l~C~~~~~L~Ev 179 (209)
T 1sgl_A 100 QQYEKHGTCASPVIKGEWNYFKKTLKLFMKYNVDKALEDAGIVASNSKMYDLKDIVVAVESAVGARPKLRCDEEGLVQKL 179 (209)
T ss_dssp HHHHHTGGGGTTTSCSHHHHHHHHHHHHHHTCHHHHHHHHTCCCCSSCEEEHHHHHHHHHHHHSSCCEEEECTTSBEEEE
T ss_pred HhhhcCccccccccccHHHHHHHHHHHHHHcChHHHHHHCCCcCCCCccccHHHHHHHHHHHhCCCeEEEECCCCeEEEE
Confidence 4999999999976559999999999999999999999999999988889999999999999999999999987 799999
Q ss_pred EEEEeCCCceeeCCCCCCCCCCCCCCCCCCCCceEeccCc
Q 032457 81 HLCFYKDFKPRDCIIERSPENDNYFSSSSCPKYVSLPVYM 120 (140)
Q Consensus 81 ~iC~d~~~~~~~Cp~~~~~~~~~~~~~~~C~~~i~~p~~~ 120 (140)
+||||+++++++|+. .++||.+|.||+++
T Consensus 180 ~iC~~~~~~~i~C~~-----------~~~C~~~i~~p~~~ 208 (209)
T 1sgl_A 180 SLCFDKDFKPRDCVQ-----------VGSCPRYVSLPEIP 208 (209)
T ss_dssp EEEEETTCCEECCCC-----------CCCSCSEEECCCCC
T ss_pred EEEeCCCccEeCCCC-----------CCCCCCCeEeCCCC
Confidence 999999999999942 45899999999986
No 3
>1vcz_A RNAse NGR3; hydrolase, ribonuclease; HET: 5GP; 1.80A {Nicotiana glutinosa} PDB: 1vd1_A* 1vd3_A*
Probab=99.98 E-value=8.6e-33 Score=214.60 Aligned_cols=112 Identities=29% Similarity=0.449 Sum_probs=97.2
Q ss_pred cccccccccCCCCCCCHHHHHHHHHHHHHhcCchHHHHhCCCCCCCCCCCChHHHHHHHHHHhCCccEEEecc-----CC
Q 032457 2 VLAEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAFHATPKLDCSK-----DA 76 (140)
Q Consensus 2 ~eW~KHGTCs~~~~~~~~~YF~~al~L~~k~ni~~~L~~~gI~Ps~~~~~~~~~I~~ai~~~~g~~p~l~C~~-----~~ 76 (140)
.||+|||||+. .+|.+||++|++|++++|++++|+++||+|+.+++|++++|++||++++|..|.|+|.+ ..
T Consensus 96 hEw~KHGTC~~---~~~~~YF~~a~~l~~~~n~~~~L~~~gI~Ps~g~~~t~~~I~~Ai~~~~g~~p~l~C~~~~~~~~~ 172 (217)
T 1vcz_A 96 HEWLKHGTCSA---LGERAYFQAALDFRKKSNLLENLKNAEITPRNGEHYTLESIKKAIEEGVGHSPYIECNVDTQGNHQ 172 (217)
T ss_dssp HHHHHTGGGTT---SCHHHHHHHHHHHHHHHCHHHHHHHTTCCCEEEEEEEHHHHHHHHHHHHSSCCEEEEEECTTSCEE
T ss_pred hhccCCeecCC---CCHHHHHHHHHHHHHHcccHHHHHHCCCccCcCccccHHHHHHHHHHHHCCCeEEEEeecCCCCeE
Confidence 48999999999 49999999999999999999999999999977789999999999999999999999973 37
Q ss_pred cceEEEEEeCC-CceeeCCCCCCCCCCCCCCCCCCCCceEeccCccCCC
Q 032457 77 VNELHLCFYKD-FKPRDCIIERSPENDNYFSSSSCPKYVSLPVYMSSGV 124 (140)
Q Consensus 77 L~EV~iC~d~~-~~~~~Cp~~~~~~~~~~~~~~~C~~~i~~p~~~~~~~ 124 (140)
|.||+||||++ +++++||.. ...++|++.|.||++++...
T Consensus 173 L~Ev~iC~~~~~~~~i~C~~~--------~~~~~C~~~i~~p~~~~~~~ 213 (217)
T 1vcz_A 173 IYQVYLCVDKTATDFIDCPIF--------PHGRGCGSKIEFPPFSSESD 213 (217)
T ss_dssp EEEEEEEEETTSSSEECCSSC--------CCCCCCCSEEEECCC-----
T ss_pred EEEEEEEecCCCCeeeeCCCC--------CCCCCCCCCeEEcCCCCccc
Confidence 99999999999 589999853 12258999999999986654
No 4
>1iyb_A Ribonuclease, ribonuclease M5; hydrolase; HET: 5GP; 1.50A {Nicotiana glutinosa} SCOP: d.124.1.1 PDB: 1dix_A
Probab=99.98 E-value=1.6e-32 Score=211.78 Aligned_cols=107 Identities=28% Similarity=0.512 Sum_probs=97.1
Q ss_pred cccccccccCCCCCCCHHHHHHHHHHHHHhcCchHHHHhCCCCCCCCCCCChHHHHHHHHHHhCCccEEEecc-----CC
Q 032457 2 VLAEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAFHATPKLDCSK-----DA 76 (140)
Q Consensus 2 ~eW~KHGTCs~~~~~~~~~YF~~al~L~~k~ni~~~L~~~gI~Ps~~~~~~~~~I~~ai~~~~g~~p~l~C~~-----~~ 76 (140)
.||+|||||+..+ .+|.+||++|++|++++|++++|+++||+| ++++|++++|++||++++|..|.|+|.+ ..
T Consensus 96 hEw~KHGTC~~~~-~~q~~YF~~a~~l~~~~~~~~~L~~~gI~P-~~~~~t~~~I~~Ai~~~~g~~p~l~C~~~~~~~~~ 173 (208)
T 1iyb_A 96 HEWEKHGTCAENV-FDQHGYFKKALDLKNQINLLEILQGAGIHP-DGGFYSLNSIKNAIRSAIGYAPGIECNVDESGNSQ 173 (208)
T ss_dssp HHHHHTGGGGTTT-CCHHHHHHHHHHHHHHCCHHHHHHHTTCCS-SSCEEEHHHHHHHHHHHHSSCCEEEEEECTTCCEE
T ss_pred hhccCCeeeCccc-cCHHHHHHHHHHHHHHcChHHHHHHCCccc-CCceEeHHHHHHHHHHHhCCCeEEEEeeCCCCCeE
Confidence 4899999999964 399999999999999999999999999999 4789999999999999999999999973 37
Q ss_pred cceEEEEEeCC-CceeeCCCCCCCCCCCCCCCCCCCCceEeccC
Q 032457 77 VNELHLCFYKD-FKPRDCIIERSPENDNYFSSSSCPKYVSLPVY 119 (140)
Q Consensus 77 L~EV~iC~d~~-~~~~~Cp~~~~~~~~~~~~~~~C~~~i~~p~~ 119 (140)
|.||+||||++ +++++||.. ..++||++|.||||
T Consensus 174 L~Ev~iC~~~~~~~~i~C~~~---------~~~~C~~~i~~p~f 208 (208)
T 1iyb_A 174 LYQIYICVDGSGSNLIECPIF---------PRGKCGSSIEFPTF 208 (208)
T ss_dssp EEEEEEEEETTSSSBCCCSCC---------CCCCCCSEEECCCC
T ss_pred EEEEEEEecCCCCeeecCCCC---------CCCCCCCCcCcCCC
Confidence 99999999999 689999853 34689999999987
No 5
>1ucd_A Ribonuclease MC; alpha plus beta, hydrolase; HET: U5P; 1.30A {Momordica charantia} SCOP: d.124.1.1 PDB: 1bk7_A* 1ucc_A* 1uca_A* 1v9h_A* 1j1f_A* 1ucg_A 1j1g_A*
Probab=99.97 E-value=1.1e-30 Score=198.92 Aligned_cols=101 Identities=22% Similarity=0.388 Sum_probs=92.2
Q ss_pred cccccccccCCCCCCCHHHHHHHHHHHHHhcCchHHHHhCCCCCCCCCCCChHHHHHHHHHHhCCccEEEecc------C
Q 032457 2 VLAEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAFHATPKLDCSK------D 75 (140)
Q Consensus 2 ~eW~KHGTCs~~~~~~~~~YF~~al~L~~k~ni~~~L~~~gI~Ps~~~~~~~~~I~~ai~~~~g~~p~l~C~~------~ 75 (140)
.||+|||||+...+ +|.+||++|++|++++|++++|+++||+|+ +++|++++|++||++++|..|.|+|.+ .
T Consensus 83 hEw~KHGTC~~~~~-~~~~YF~~a~~l~~~~~~~~~L~~~~I~P~-~~~~t~~~I~~ai~~~~g~~p~l~C~~~~~~~~~ 160 (190)
T 1ucd_A 83 HEWTKHGTCSESTF-NQAAYFKLAVDMRNNYDIIGALRPHAAGPN-GRTKSRQAIKGFLKAKFGKFPGLRCRTDPQTKVS 160 (190)
T ss_dssp HHHHHTGGGGTTTC-CHHHHHHHHHHHHHTCCHHHHHGGGTCSCS-SSEEEHHHHHHHHHHHHSSCCEEEEEECTTTCCE
T ss_pred hccccCcEeCCCCC-CHHHHHHHHHHHHHHcCHHHHHHHCCCCCC-CceEeHHHHHHHHHHHHCCCeEEEeccCCCCCCc
Confidence 49999999998654 899999999999999999999999999998 678999999999999999999999973 4
Q ss_pred CcceEEEEEeCC-CceeeCCCCCCCCCCCCCCCCCCCCceEe
Q 032457 76 AVNELHLCFYKD-FKPRDCIIERSPENDNYFSSSSCPKYVSL 116 (140)
Q Consensus 76 ~L~EV~iC~d~~-~~~~~Cp~~~~~~~~~~~~~~~C~~~i~~ 116 (140)
.|.||+||||++ +++++||. .+|+++++|
T Consensus 161 ~L~Ev~iC~~~~~~~~i~Cp~------------~~C~~~~~f 190 (190)
T 1ucd_A 161 YLVQVVACFAQDGSTLIDCTR------------DTCGANFIF 190 (190)
T ss_dssp EEEEEEEEEETTSSSEECCCC------------CCCCSEEEC
T ss_pred EEEEEEEEecCCCCeeccCCC------------CCCCCCCCC
Confidence 799999999999 78999973 479998765
No 6
>1ioo_A SF11-RNAse; SELF-incompatibility ribonuclease, hydrolase; HET: NAG BMA MAN; 1.55A {Nicotiana alata} SCOP: d.124.1.1
Probab=99.97 E-value=2.3e-30 Score=197.97 Aligned_cols=103 Identities=23% Similarity=0.479 Sum_probs=91.8
Q ss_pred cccccccccCCCCCCCHHHHHHHHHHHHHhcCchHHHHhCCCCCCCCCCCChHHHHHHHHHHhCCccEEEecc-----CC
Q 032457 2 VLAEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAFHATPKLDCSK-----DA 76 (140)
Q Consensus 2 ~eW~KHGTCs~~~~~~~~~YF~~al~L~~k~ni~~~L~~~gI~Ps~~~~~~~~~I~~ai~~~~g~~p~l~C~~-----~~ 76 (140)
.||+|||||+..++ +|.+||++|++|++++|++++|+++||+|+. +|++++|++||++++|..|.|+|.. ..
T Consensus 86 hEw~KHGTC~~~~~-~q~~YF~~a~~L~~~~n~~~~L~~~gI~P~~--~~t~~~I~~Ai~~~~g~~p~l~C~~~~~~~~~ 162 (196)
T 1ioo_A 86 YQYIKHGSCCQKRY-NQNTYFGLALRLKDKFDLLRTLQTHRIIPGS--SYTFQDIFDAIKTVSQENPDIKCAEVTKGTPE 162 (196)
T ss_dssp HHHHHTGGGCTTTC-CHHHHHHHHHHHHHTCCHHHHHHHTTCCTTE--EECHHHHHHHHHHHHSSCCEEEEECSSTTCCE
T ss_pred hhCcCCcCcCCCcC-CHHHHHHHHHHHHHHCCHHHHHHHCCCccCC--CcCHHHHHHHHHHHhCCCeEEEeeecCCCCeE
Confidence 49999999999654 8999999999999999999999999999964 5999999999999999999999952 47
Q ss_pred cceEEEEEeCCCc-eeeCCCCCCCCCCCCCCCCCC--CCceEecc
Q 032457 77 VNELHLCFYKDFK-PRDCIIERSPENDNYFSSSSC--PKYVSLPV 118 (140)
Q Consensus 77 L~EV~iC~d~~~~-~~~Cp~~~~~~~~~~~~~~~C--~~~i~~p~ 118 (140)
|.||+||||++++ +++||.. .+| +..|.||+
T Consensus 163 L~Ev~iC~~~~~~~~i~Cp~~-----------~~C~~~~~i~fp~ 196 (196)
T 1ioo_A 163 LYEIGICFTPNADSMFRCPQS-----------DTCDKTAKVLFRR 196 (196)
T ss_dssp EEEEEEEECTTSSSEECCCCC-----------CCSCTTSCEEECC
T ss_pred EEEEEEEEeCCCCEEeCCcCC-----------CCCCCCCCeecCC
Confidence 9999999999985 9999852 479 45599985
No 7
>3d3z_A Actibind; RNAse, hydrolase; HET: NAG D3Z; 1.70A {Aspergillus niger}
Probab=99.96 E-value=1.3e-30 Score=206.43 Aligned_cols=113 Identities=23% Similarity=0.347 Sum_probs=99.4
Q ss_pred cccccccccCCCC-------C---CCHHHHHHHHHHHHHhcCchHHHHhCCCCCCCCCCCChHHHHHHHHHHh-CCccEE
Q 032457 2 VLAEKHGTCSFPV-------V---RDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAF-HATPKL 70 (140)
Q Consensus 2 ~eW~KHGTCs~~~-------~---~~~~~YF~~al~L~~k~ni~~~L~~~gI~Ps~~~~~~~~~I~~ai~~~~-g~~p~l 70 (140)
.||+|||||+..+ + .++.+||++|++|++++|++++|+++||+|+.+++|++++|++||++++ |..|.|
T Consensus 110 hEW~KHGTC~~~~~~~C~~~y~~~~~~~~YF~~al~L~~k~n~~~~L~~~gI~P~~~~tyt~~~I~~Ai~~~~~g~~p~l 189 (247)
T 3d3z_A 110 HEWNKHGTCINTIEPSCYTDYYAQEEVGDFFQQVVDLFKTLDSYTALSDAGITPSEDATYKLSDIEDALAAIHDGYPPYV 189 (247)
T ss_dssp HHHHHTGGGCGGGSGGGBSSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHTTCCCCSSCCBCHHHHHHHHHTTTTTCCCEE
T ss_pred HhhhcCeeecccCCcccccccccccCHHHHHHHHHHHHHhcCcHHHHHHCCccCCCCceECHHHHHHHHHHhcCCCCeEE
Confidence 4999999998742 1 3688999999999999999999999999999888999999999999999 899999
Q ss_pred EeccCCcceEEEEEeCCC-----ceeeCCCCCCCCCCCCCCCCCCCCc-eEeccCccCC
Q 032457 71 DCSKDAVNELHLCFYKDF-----KPRDCIIERSPENDNYFSSSSCPKY-VSLPVYMSSG 123 (140)
Q Consensus 71 ~C~~~~L~EV~iC~d~~~-----~~~~Cp~~~~~~~~~~~~~~~C~~~-i~~p~~~~~~ 123 (140)
+|.++.|.||+||||+++ +++.|+.. ...+||.. |.|||++...
T Consensus 190 ~C~~~~L~Ev~iC~~~~~~~~~~~~~~~~~~---------~~~~C~~~~I~~pp~~~~~ 239 (247)
T 3d3z_A 190 GCEDGALSQLYYYFNVKGSAIGGTYVASERL---------EDSNCKDSGIKYPPKYSSS 239 (247)
T ss_dssp EEETTEEEEEEEEEEEESCTTTSEEEECCCS---------SCBSSCSSCBBCCCTTCC-
T ss_pred EeCCCEEEEEEEEEecCCCccCCceeECCCC---------CCCCCCCCceEeCCCCCCC
Confidence 999999999999999987 46778653 35689987 9999998543
No 8
>1iqq_A S3-RNAse; japanese PEAR, SELF-incompatibilit family ribonuclease, hydrolase; HET: NAG BMA MAN; 1.50A {Pyrus pyrifolia} SCOP: d.124.1.1
Probab=99.96 E-value=7e-30 Score=195.78 Aligned_cols=109 Identities=34% Similarity=0.547 Sum_probs=93.5
Q ss_pred cccccccccCCCCCCCHHHHHHHHHHHH--HhcCchHHHHhCCCCCCCCCCCChHHHHHHHHHHh-CCccEEEecc----
Q 032457 2 VLAEKHGTCSFPVVRDEYSYFSTTLNLY--FKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAF-HATPKLDCSK---- 74 (140)
Q Consensus 2 ~eW~KHGTCs~~~~~~~~~YF~~al~L~--~k~ni~~~L~~~gI~Ps~~~~~~~~~I~~ai~~~~-g~~p~l~C~~---- 74 (140)
.||+|||||+...+.+|.+||++|++|+ +++|++++|+++||+|+ ++.|++++|++||++++ |..|.|+|.+
T Consensus 83 hEw~KHGTC~~~~~~~~~~YF~~a~~l~~~~k~n~~~~L~~~~I~P~-~~~~t~~~I~~Ai~~~~~g~~p~l~C~~~~~~ 161 (200)
T 1iqq_A 83 KEWMKHGSCGYPTIDNENHYFETVIKMYISKKQNVSRILSKAKIEPD-GKKRALLDIENAIRNGADNKKPKLKCQKKGTT 161 (200)
T ss_dssp HHHHHTGGGSTTTSCSHHHHHHHHHHHHTTTCCCHHHHHHHTTCCSS-CCEECHHHHHHHHHTTTTTCCCEEEEEEETTE
T ss_pred hhhhCCcCcCCcccCCHHHHHHHHHHHHhhcccCHHHHHHHcCCccC-CCeecHHHHHHHHHHhcCCCceEEEEeeCCCC
Confidence 4999999999654469999999999999 77999999999999997 46799999999999999 8999999984
Q ss_pred CCcceEEEEEeCCC-ceeeCCCCCCCCCCCCCCCCCCCCc-eEe
Q 032457 75 DAVNELHLCFYKDF-KPRDCIIERSPENDNYFSSSSCPKY-VSL 116 (140)
Q Consensus 75 ~~L~EV~iC~d~~~-~~~~Cp~~~~~~~~~~~~~~~C~~~-i~~ 116 (140)
..|.||+||||+++ ++++||.. . +.+...+||.+ |.|
T Consensus 162 ~~L~Ev~iC~~~~~~~~i~C~~~--~---~~~~~~~Cp~~~i~y 200 (200)
T 1iqq_A 162 TELVEITLCSDKSGEHFIDCPHP--F---EPISPHYCPTNNIKY 200 (200)
T ss_dssp EEEEEEEEEECTTSSSEECCSCC--C---CTTSTTCCCSSCEEC
T ss_pred eEEEEEEEEEECCCCeEEeCCCC--C---CCCCCCCCCccCcCC
Confidence 37999999999998 69999863 1 11346799984 765
No 9
>1bol_A Protein (ribonuclease RH); ribonucleases, hydrolase; 2.00A {Rhizopus niveus} SCOP: d.124.1.1
Probab=99.96 E-value=5e-30 Score=199.93 Aligned_cols=107 Identities=30% Similarity=0.450 Sum_probs=95.2
Q ss_pred cccccccccCCCC-------C---CCHHHHHHHHHHHHHhcCchHHHHhCCCCCCCCCCCChHHHHHHHHHHhCCccEEE
Q 032457 2 VLAEKHGTCSFPV-------V---RDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAFHATPKLD 71 (140)
Q Consensus 2 ~eW~KHGTCs~~~-------~---~~~~~YF~~al~L~~k~ni~~~L~~~gI~Ps~~~~~~~~~I~~ai~~~~g~~p~l~ 71 (140)
.||+|||||+..+ + .++.+||++|++|++++|++++|+++||+|+. .|++++|++||++++|..|.|+
T Consensus 104 hEW~KHGTC~~~~~~~c~~~y~~~~~~~~YF~~al~L~~~~n~~~~L~~~gI~P~~--~yt~~~I~~Ai~~~~g~~p~l~ 181 (222)
T 1bol_A 104 HEWSKHGTCVSTYDPDCYDNYEEGEDIVDYFQKAMDLRSQYNVYKAFSSNGITPGG--TYTATEMQSAIESYFGAKAKID 181 (222)
T ss_dssp HHHHHTGGGCGGGSGGGCTTCCTTHHHHHHHHHHHHHHHHSCHHHHHHTTTCCSSE--EEEHHHHHHHHHHHHSSCCEEE
T ss_pred hhhhcCeeeccccCccccccccccccHHHHHHHHHHHHHHcCcHHHHHHcCCCCCC--cCcHHHHHHHHHHHhCCCeEEE
Confidence 4999999999742 1 26899999999999999999999999999964 4999999999999999999999
Q ss_pred eccCCcceEEEEEeCC--CceeeCCCCCCCCCCCCCCCCCCCCceEeccC
Q 032457 72 CSKDAVNELHLCFYKD--FKPRDCIIERSPENDNYFSSSSCPKYVSLPVY 119 (140)
Q Consensus 72 C~~~~L~EV~iC~d~~--~~~~~Cp~~~~~~~~~~~~~~~C~~~i~~p~~ 119 (140)
|.++.|.||+|||+++ +++++|+.. ...+||++|.|||.
T Consensus 182 C~~~~L~Ev~ic~~~~g~~~~~~~~~~---------~~~~C~~~i~~ppk 222 (222)
T 1bol_A 182 CSSGTLSDVALYFYVRGRDTYVITDAL---------STGSCSGDVEYPTK 222 (222)
T ss_dssp EETTEEEEEEEEEEEETTTEEEEECCS---------CCCSCCSEEEECCC
T ss_pred ECCCEEeEEEEEEEcCCCCCeEECCCC---------CCCCCCCCeEeCCC
Confidence 9999999999999998 478999753 35689999999984
No 10
>3t0o_A Ribonuclease T2, ribonuclease 6; rnaset2, alpha/beta fold, RNA cleavage, hydrol; HET: NAG; 1.59A {Homo sapiens}
Probab=99.96 E-value=4.3e-29 Score=196.89 Aligned_cols=119 Identities=25% Similarity=0.453 Sum_probs=95.5
Q ss_pred cccccccccCCCC--CCCHHHHHHHHHHHHHhcCchHHHHhCCCCCCCCCCCChHHHHHHHHHHhCCccEEEeccC----
Q 032457 2 VLAEKHGTCSFPV--VRDEYSYFSTTLNLYFKYNVTRVLNEAGYLPSNTEKYPLGGIVSAIQNAFHATPKLDCSKD---- 75 (140)
Q Consensus 2 ~eW~KHGTCs~~~--~~~~~~YF~~al~L~~k~ni~~~L~~~gI~Ps~~~~~~~~~I~~ai~~~~g~~p~l~C~~~---- 75 (140)
.||+|||||++.+ +.+|.+||++|++|++++|++++|+++||+|+.. .|++++|++||++++|+.|.|+|.++
T Consensus 89 hEW~KHGTC~~~~~~~~~q~~YF~~a~~L~~~~n~~~~L~~~gI~P~~~-~yt~~~I~~Ai~~~~g~~P~l~C~~~~~~~ 167 (238)
T 3t0o_A 89 HEWEKHGTCAAQVDALNSQKKYFGRSLELYRELDLNSVLLKLGIKPSIN-YYQVADFKDALARVYGVIPKIQCLPPSQDE 167 (238)
T ss_dssp HHCCCCCHHHTTSGGGCSHHHHHHHHHHHHHHHCHHHHHHHTTCCCCSS-CEEHHHHHHHHHHHHSSCCEEEEECCC---
T ss_pred HhhhcCceecCCccccccHHHHHHHHHHHHHHcccHHHHHhcCccCCCC-cccHHHHHHHHHHHHCCCeEEEEecCCCCC
Confidence 4999999999862 3489999999999999999999999999999854 89999999999999999999999742
Q ss_pred ---CcceEEEEEeC-CCceeeCCCCCCCCC----------C-CCCCCCCCCCc-eEeccCcc
Q 032457 76 ---AVNELHLCFYK-DFKPRDCIIERSPEN----------D-NYFSSSSCPKY-VSLPVYMS 121 (140)
Q Consensus 76 ---~L~EV~iC~d~-~~~~~~Cp~~~~~~~----------~-~~~~~~~C~~~-i~~p~~~~ 121 (140)
.|.||+||||+ .+++|+||.+...+. + ......-|.+. |.|||.+.
T Consensus 168 ~~~~L~EV~iC~d~~~~~~idCp~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~ 229 (238)
T 3t0o_A 168 EVQTIGQIELCLTKQDQQLQNCTEPGEQPSPKQEVWLANGAAESRGLRVCEDGPVFYPPPKK 229 (238)
T ss_dssp CCCEEEEEEEEEETTTCCEECCC--------------------CTTCEECCSSEEBCCCCC-
T ss_pred cccEEEEEEEEeecCCCEEecCCCCCCCCccccccccccccccCCceeecCCCCccCCCCcc
Confidence 49999999999 678999997522110 0 01345779877 88887654
No 11
>2pqx_A Ribonuclease I; hydrolase; HET: MES; 1.42A {Escherichia coli} PDB: 2ea1_A* 2pqy_A* 2z70_A*
Probab=99.92 E-value=1e-25 Score=177.68 Aligned_cols=100 Identities=18% Similarity=0.209 Sum_probs=85.7
Q ss_pred cccccccccCCCCCCCHHHHHHHHHHHHHhcCch---HHHHhCCCCCCCCCCCChHHHHHHHHHHhCCcc----EEEecc
Q 032457 2 VLAEKHGTCSFPVVRDEYSYFSTTLNLYFKYNVT---RVLNEAGYLPSNTEKYPLGGIVSAIQNAFHATP----KLDCSK 74 (140)
Q Consensus 2 ~eW~KHGTCs~~~~~~~~~YF~~al~L~~k~ni~---~~L~~~gI~Ps~~~~~~~~~I~~ai~~~~g~~p----~l~C~~ 74 (140)
.||+|||||++ .+|.+||++|++|++++|+. ++|+. .| +++|++++|++||++++|..| .|+|.+
T Consensus 128 hEW~KHGTC~~---~~~~~YF~~a~~l~~~~n~~~~~~~l~~---~~--g~~~t~~~I~~Ai~~~~g~~p~~~v~l~C~~ 199 (245)
T 2pqx_A 128 YEYAKHGACFG---FDPDAYFGTMVRLNQEIKESEAGKFLAD---NY--GKTVSRRDFDAAFAKSWGKENVKAVKLTCQG 199 (245)
T ss_dssp HHHHHHTGGGT---CCHHHHHHHHHHHHHHHHHSHHHHHHHH---TT--TSEEEHHHHHHHHHHHHCGGGGGGEEEEEET
T ss_pred HHhhhCCeecC---CCHHHHHHHHHHHHHHhccchHHHHhhc---CC--CceEcHHHHHHHHHHHhCCCCCcceEEEECC
Confidence 49999999999 69999999999999999875 45777 23 678999999999999999775 999998
Q ss_pred C--CcceEEEEEeCCC--------ceeeCCCCCCCCCCCCCCCCCCCCceEeccCc
Q 032457 75 D--AVNELHLCFYKDF--------KPRDCIIERSPENDNYFSSSSCPKYVSLPVYM 120 (140)
Q Consensus 75 ~--~L~EV~iC~d~~~--------~~~~Cp~~~~~~~~~~~~~~~C~~~i~~p~~~ 120 (140)
+ .|.||+||||+++ ++++||. ..+||++|+||++.
T Consensus 200 ~~~~L~Ev~iC~~~~~~~~~~~~~~~i~cp~-----------~~~C~~~~~~~~~g 244 (245)
T 2pqx_A 200 NPAYLTEIQISIKADAINAPLSANSFLPQPH-----------PGNCGKTFVIDKAG 244 (245)
T ss_dssp TTTEEEEEEEEEEGGGTTSCCCTTSBCCCSC-----------CBSCCSEEECCCSC
T ss_pred CCCEEEEEEEEEcccccCCCccccccccCCC-----------CCCCCCCeEeCCCC
Confidence 7 8999999999984 4666653 35899999999863
No 12
>4dvk_A E(RNS) glycoprotein; T2 ribonuclease, virus envelope glycoprotein, viral protein; HET: NAG BMA MAN; 2.21A {Bovine viral diarrhea virus} PDB: 4dw5_A* 4dvl_A* 4dvn_A* 4dw3_A* 4dw4_A* 4dwc_A* 4dwa_A* 4dw7_A*
Probab=98.15 E-value=3e-07 Score=68.27 Aligned_cols=24 Identities=17% Similarity=0.194 Sum_probs=20.8
Q ss_pred cccccccccCCCCCCCHHHHHHHHHHH
Q 032457 2 VLAEKHGTCSFPVVRDEYSYFSTTLNL 28 (140)
Q Consensus 2 ~eW~KHGTCs~~~~~~~~~YF~~al~L 28 (140)
.||+|||||+. .+|.+||+++...
T Consensus 74 HEWnKHGTCS~---ynQe~YFdL~~~a 97 (165)
T 4dvk_A 74 HEWNKHGWCNW---YNIEPWILLMNKT 97 (165)
T ss_dssp HHHHHHTHHHH---SSHHHHHHHHHHH
T ss_pred HHHHcCCccCC---CCHHHHHHHHHHH
Confidence 59999999997 5999999998554
No 13
>2ciw_A Chloroperoxidase; oxidoreductase, heme, iron, chloride, manganese, pyrrolidone carboxylic acid, glycoprotein, metal-binding; HET: NAG BMA MAN HEM; 1.15A {Caldariomyces fumago} SCOP: a.39.3.1 a.39.3.1 PDB: 1cpo_A* 2civ_A* 2cix_A* 2ciy_A* 2ciz_A* 2cj0_A* 2cj1_A* 2cj2_A* 2cpo_A* 2j18_A* 2j19_A* 2j5m_A*
Probab=83.45 E-value=0.73 Score=36.96 Aligned_cols=34 Identities=18% Similarity=0.299 Sum_probs=30.5
Q ss_pred hHHHHhCCCCCCCCCCCChHHHHHHHHHHhCCcc
Q 032457 35 TRVLNEAGYLPSNTEKYPLGGIVSAIQNAFHATP 68 (140)
Q Consensus 35 ~~~L~~~gI~Ps~~~~~~~~~I~~ai~~~~g~~p 68 (140)
+.+|+++|+.|.+++.++..++..|+++++|..+
T Consensus 33 LNaLANHGyLpR~G~nit~~~l~~al~~~~n~~~ 66 (299)
T 2ciw_A 33 LNALANHGYIPHDGRAISRETLQNAFLNHMGIAN 66 (299)
T ss_dssp HHHHHHTTSSCTTCEEECHHHHHHHHHHHHCBCH
T ss_pred HHHHHhcCCcCCCCCccCHHHHHHHHHHhcCCCH
Confidence 5679999999999988999999999999998654
No 14
>3oqg_A HPY188I; endonuclease-DNA complex, restriction enzyme, HPY188I, inter GIY-YIG nuclease, catalytic mechanism; HET: DNA; 1.75A {Helicobacter pylori} PDB: 3or3_A
Probab=55.40 E-value=3.4 Score=29.53 Aligned_cols=18 Identities=44% Similarity=0.654 Sum_probs=14.8
Q ss_pred cccccccccCCCCCCCHHHHHHHH
Q 032457 2 VLAEKHGTCSFPVVRDEYSYFSTT 25 (140)
Q Consensus 2 ~eW~KHGTCs~~~~~~~~~YF~~a 25 (140)
+|++|.|||+. ..||-.-
T Consensus 103 ~~yrkngtc~t------tnyfvlq 120 (180)
T 3oqg_A 103 VEYRKNGTCST------TNYFVLQ 120 (180)
T ss_dssp HHHHHHTCSCH------HHHHHHH
T ss_pred eeeecCCcccc------chHHHHH
Confidence 58999999998 5899554
No 15
>2cu1_A Mitogen-activated protein kinase kinase kinase 2; PB1 domain, MAPK/ERK kinase kinase 2, MEK kinase 2, MEKK 2, signaling protein; NMR {Homo sapiens} SCOP: d.15.2.2
Probab=23.60 E-value=98 Score=20.75 Aligned_cols=27 Identities=19% Similarity=0.220 Sum_probs=24.3
Q ss_pred CCCChHHHHHHHHHHhCCccEEEeccC
Q 032457 49 EKYPLGGIVSAIQNAFHATPKLDCSKD 75 (140)
Q Consensus 49 ~~~~~~~I~~ai~~~~g~~p~l~C~~~ 75 (140)
..++.++++.-++.++|....|.|..+
T Consensus 26 RPv~f~eL~~Kv~~~fGq~ldL~y~n~ 52 (103)
T 2cu1_A 26 RPVKLEDLRSKAKIAFGQSMDLHYTNN 52 (103)
T ss_dssp SSCCHHHHHHHHHHHHSSCEEEEECSS
T ss_pred CCccHHHHHHHHHHHhCCeeeEEEecc
Confidence 578999999999999999999999854
Done!